Metagenome Family F054984

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F054984
Family Type	Metagenome
Number of Sequences	139
Average Sequence Length	54 residues
Representative Sequence	MERLLKWLDDLDDLTDVFRVQAPSVIVTALLVVAFVAGLGALLLLGPPDLLAAP
Number of Associated Samples	91
Number of Associated Scaffolds	139

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	21.58 %
% of genes near scaffold ends (potentially truncated)	22.30 %
% of genes from short scaffolds (< 2000 bps)	77.70 %
Associated GOLD sequencing projects	78
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.56

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (64.029 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment (17.986 % of family members)
Environment Ontology (ENVO)	Unclassified (33.813 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Sediment (non-saline) (39.568 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 53.66% β-sheet: 0.00% Coil/Unstructured: 46.34%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.56
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.56
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 139 Family Scaffolds
PF01641	SelR	59.71
PF11892	DUF3412	11.51
PF01161	PBP	6.47
PF00254	FKBP_C	5.04
PF14793	DUF4478	2.88
PF02129	Peptidase_S15	1.44
PF03734	YkuD	1.44
PF02224	Cytidylate_kin	0.72
PF02867	Ribonuc_red_lgC	0.72
PF13411	MerR_1	0.72

COG ID	Name	Functional Category	% Frequency in 139 Family Scaffolds
COG0229	Peptide methionine sulfoxide reductase MsrB	Posttranslational modification, protein turnover, chaperones [O]	59.71
COG1881	Uncharacterized conserved protein, phosphatidylethanolamine-binding protein (PEBP) family	General function prediction only [R]	6.47
COG1376	Lipoprotein-anchoring transpeptidase ErfK/SrfK	Cell wall/membrane/envelope biogenesis [M]	1.44
COG3034	Murein L,D-transpeptidase YafK	Cell wall/membrane/envelope biogenesis [M]	1.44
COG0209	Ribonucleotide reductase alpha subunit	Nucleotide transport and metabolism [F]	0.72
COG0283	Cytidylate kinase	Nucleotide transport and metabolism [F]	0.72

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.03 %
All Organisms	root	All Organisms	35.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.03 %
cellular organisms	root	All Organisms → cellular organisms	35.25 %
Viruses	superkingdom	All Organisms → Viruses	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.03 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	33.09 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	2.16 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.03 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	29.50 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	2.16 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.03 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	18.71 %
Metazoa	kingdom	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa	1.44 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.72 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.03 %
Nevskiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales	2.16 %
Eumetazoa	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa	1.44 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.72 %
Enterobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales	0.72 %
Pseudomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales	0.72 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.72 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.03 %
Steroidobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae	2.16 %
Pseudomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae	0.72 %
Yersiniaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Yersiniaceae	0.72 %
Cnidaria	phylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria	0.72 %
Bilateria	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria	0.72 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.72 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.72 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.03 %
Steroidobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter	2.16 %
Protostomia	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia	0.72 %
Pseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	0.72 %
Serratia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Yersiniaceae → Serratia	0.72 %
Anthozoa	class	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa	0.72 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.72 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.72 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.03 %
Steroidobacter denitrificans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	2.16 %
Pseudomonas fluorescens group	species group	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas fluorescens group	0.72 %
Ecdysozoa	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa	0.72 %
Serratia marcescens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Yersiniaceae → Serratia → Serratia marcescens	0.72 %
Hexacorallia	subclass	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia	0.72 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.72 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.72 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.03 %
Steroidobacter denitrificans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	2.16 %
Panarthropoda	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda	0.72 %
Scleractinia	order	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia → Scleractinia	0.72 %
Pseudomonas fluorescens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas fluorescens group → Pseudomonas fluorescens	0.72 %
Serratia marcescens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Yersiniaceae → Serratia → Serratia marcescens	0.72 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.72 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.72 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.03 %
Steroidobacter denitrificans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	2.16 %
Astrocoeniina	suborder	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia → Scleractinia → Astrocoeniina	0.72 %
Arthropoda	phylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda	0.72 %
Pseudomonas fluorescens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas fluorescens group → Pseudomonas fluorescens	0.72 %
Serratia marcescens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Yersiniaceae → Serratia → Serratia marcescens	0.72 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.72 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.72 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.03 %
Steroidobacter denitrificans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	2.16 %
Chelicerata	subphylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Chelicerata	0.72 %
Astrocoeniina	suborder	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia → Scleractinia → Astrocoeniina	0.72 %
Pseudomonas fluorescens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas fluorescens group → Pseudomonas fluorescens	0.72 %
Serratia marcescens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Yersiniaceae → Serratia → Serratia marcescens	0.72 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.72 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.72 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.03 %
Steroidobacter denitrificans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	2.16 %
Arachnida	class	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Chelicerata → Arachnida	0.72 %
Astrocoeniina	suborder	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia → Scleractinia → Astrocoeniina	0.72 %
Pseudomonas fluorescens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas fluorescens group → Pseudomonas fluorescens	0.72 %
Serratia marcescens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Yersiniaceae → Serratia → Serratia marcescens	0.72 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.72 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.72 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.03 %
Steroidobacter denitrificans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	2.16 %
Acari	subclass	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Chelicerata → Arachnida → Acari	0.72 %
Astrocoeniina	suborder	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia → Scleractinia → Astrocoeniina	0.72 %
Pseudomonas fluorescens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas fluorescens group → Pseudomonas fluorescens	0.72 %
Serratia marcescens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Yersiniaceae → Serratia → Serratia marcescens	0.72 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.72 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.72 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.03 %
Steroidobacter denitrificans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	2.16 %
Acariformes	superorder	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Chelicerata → Arachnida → Acari → Acariformes	0.72 %
Astrocoeniina	suborder	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia → Scleractinia → Astrocoeniina	0.72 %
Pseudomonas fluorescens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas fluorescens group → Pseudomonas fluorescens	0.72 %
Serratia marcescens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Yersiniaceae → Serratia → Serratia marcescens	0.72 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.72 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.72 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.03 %
Steroidobacter denitrificans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	2.16 %
Trombidiformes	order	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Chelicerata → Arachnida → Acari → Acariformes → Trombidiformes	0.72 %
Astrocoeniina	suborder	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia → Scleractinia → Astrocoeniina	0.72 %
Pseudomonas fluorescens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas fluorescens group → Pseudomonas fluorescens	0.72 %
Serratia marcescens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Yersiniaceae → Serratia → Serratia marcescens	0.72 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.72 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.72 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.03 %
Steroidobacter denitrificans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	2.16 %
Prostigmata	suborder	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Chelicerata → Arachnida → Acari → Acariformes → Trombidiformes → Prostigmata	0.72 %
Astrocoeniina	suborder	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia → Scleractinia → Astrocoeniina	0.72 %
Pseudomonas fluorescens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas fluorescens group → Pseudomonas fluorescens	0.72 %
Serratia marcescens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Yersiniaceae → Serratia → Serratia marcescens	0.72 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.72 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.72 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.72 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090014\|GPIPI_16657957	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3089	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101525049	Not Available	946	Open in IMG/M
3300000956\|JGI10216J12902_108683041	Not Available	582	Open in IMG/M
3300000956\|JGI10216J12902_119696800	Not Available	768	Open in IMG/M
3300003858\|Ga0031656_10002488	All Organisms → cellular organisms → Bacteria → Proteobacteria	7416	Open in IMG/M
3300003858\|Ga0031656_10018555	All Organisms → cellular organisms → Bacteria → Proteobacteria	2905	Open in IMG/M
3300003858\|Ga0031656_10031324	Not Available	2192	Open in IMG/M
3300003858\|Ga0031656_10218960	Not Available	650	Open in IMG/M
3300003858\|Ga0031656_10232298	Not Available	629	Open in IMG/M
3300003910\|JGI26437J51864_10082734	Not Available	702	Open in IMG/M
3300004151\|Ga0066602_10018032	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3067	Open in IMG/M
3300004151\|Ga0066602_10384969	Not Available	629	Open in IMG/M
3300004151\|Ga0066602_10462516	Not Available	575	Open in IMG/M
3300004155\|Ga0066600_10136991	All Organisms → cellular organisms → Bacteria → Proteobacteria	1001	Open in IMG/M
3300004155\|Ga0066600_10199835	Not Available	861	Open in IMG/M
3300004156\|Ga0062589_100800882	Not Available	853	Open in IMG/M
3300004156\|Ga0062589_100926610	Not Available	805	Open in IMG/M
3300004242\|Ga0066601_10173418	Not Available	811	Open in IMG/M
3300004463\|Ga0063356_101036241	All Organisms → cellular organisms → Bacteria	1175	Open in IMG/M
3300004463\|Ga0063356_103957597	Not Available	638	Open in IMG/M
3300004481\|Ga0069718_10097130	Not Available	1172	Open in IMG/M
3300004481\|Ga0069718_15989606	Not Available	795	Open in IMG/M
3300004481\|Ga0069718_16038142	Not Available	552	Open in IMG/M
3300004643\|Ga0062591_100080853	All Organisms → cellular organisms → Bacteria → Proteobacteria	2015	Open in IMG/M
3300004643\|Ga0062591_101570974	Not Available	661	Open in IMG/M
3300004778\|Ga0062383_10058057	Not Available	1546	Open in IMG/M
3300005656\|Ga0073902_10268273	All Organisms → cellular organisms → Bacteria	759	Open in IMG/M
3300005660\|Ga0073904_10226040	Not Available	1084	Open in IMG/M
3300005827\|Ga0074478_1863035	Not Available	904	Open in IMG/M
3300005831\|Ga0074471_10936376	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	6123	Open in IMG/M
3300005940\|Ga0073913_10044830	Not Available	693	Open in IMG/M
3300006058\|Ga0075432_10305355	Not Available	662	Open in IMG/M
3300006224\|Ga0079037_100008490	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	6503	Open in IMG/M
3300006224\|Ga0079037_100012594	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	5602	Open in IMG/M
3300006224\|Ga0079037_100055267	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3129	Open in IMG/M
3300009009\|Ga0105105_10229063	Not Available	976	Open in IMG/M
3300009009\|Ga0105105_10258735	Not Available	926	Open in IMG/M
3300009009\|Ga0105105_10356957	Not Available	804	Open in IMG/M
3300009037\|Ga0105093_10059689	All Organisms → cellular organisms → Bacteria	1752	Open in IMG/M
3300009075\|Ga0105090_10023684	All Organisms → cellular organisms → Bacteria → Proteobacteria	3792	Open in IMG/M
3300009075\|Ga0105090_10099924	All Organisms → cellular organisms → Bacteria	1816	Open in IMG/M
3300009075\|Ga0105090_10123007	Not Available	1623	Open in IMG/M
3300009075\|Ga0105090_10272819	All Organisms → Viruses → Predicted Viral	1039	Open in IMG/M
3300009075\|Ga0105090_10540853	Not Available	708	Open in IMG/M
3300009075\|Ga0105090_10653723	Not Available	638	Open in IMG/M
3300009085\|Ga0105103_10024369	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2985	Open in IMG/M
3300009091\|Ga0102851_12793016	Not Available	561	Open in IMG/M
3300009111\|Ga0115026_11907615	Not Available	506	Open in IMG/M
3300009156\|Ga0111538_11274370	All Organisms → cellular organisms → Bacteria	928	Open in IMG/M
3300009157\|Ga0105092_10723904	Not Available	580	Open in IMG/M
3300009165\|Ga0105102_10521158	All Organisms → cellular organisms → Eukaryota → Opisthokonta	648	Open in IMG/M
3300009167\|Ga0113563_10494220	All Organisms → cellular organisms → Bacteria → Proteobacteria	1332	Open in IMG/M
3300009169\|Ga0105097_10258045	All Organisms → cellular organisms → Bacteria → Proteobacteria	961	Open in IMG/M
3300009169\|Ga0105097_10629050	Not Available	605	Open in IMG/M
3300009170\|Ga0105096_10107252	Not Available	1395	Open in IMG/M
3300009170\|Ga0105096_10284227	All Organisms → cellular organisms → Bacteria → Proteobacteria	843	Open in IMG/M
3300009448\|Ga0114940_10291343	Not Available	714	Open in IMG/M
3300009527\|Ga0114942_1372071	Not Available	566	Open in IMG/M
3300012951\|Ga0164300_10667857	Not Available	624	Open in IMG/M
3300013232\|Ga0170573_10989345	All Organisms → cellular organisms → Bacteria → Proteobacteria	2403	Open in IMG/M
3300014309\|Ga0075317_1012369	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas fluorescens group → Pseudomonas fluorescens	1473	Open in IMG/M
3300014312\|Ga0075345_1139862	Not Available	575	Open in IMG/M
3300018083\|Ga0184628_10180552	Not Available	1102	Open in IMG/M
3300021082\|Ga0210380_10131394	Not Available	1118	Open in IMG/M
3300022204\|Ga0224496_10061671	Not Available	1685	Open in IMG/M
3300022213\|Ga0224500_10000667	Not Available	22472	Open in IMG/M
3300022213\|Ga0224500_10164304	Not Available	825	Open in IMG/M
3300022213\|Ga0224500_10173607	Not Available	798	Open in IMG/M
3300022213\|Ga0224500_10279484	Not Available	606	Open in IMG/M
3300022214\|Ga0224505_10029120	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2405	Open in IMG/M
3300024895\|Ga0208508_1028319	Not Available	1091	Open in IMG/M
3300025130\|Ga0209594_1013374	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3166	Open in IMG/M
3300025936\|Ga0207670_11885939	Not Available	508	Open in IMG/M
3300025942\|Ga0207689_10529699	Not Available	988	Open in IMG/M
3300026088\|Ga0207641_11819040	Not Available	611	Open in IMG/M
3300027547\|Ga0209864_1060640	Not Available	511	Open in IMG/M
3300027683\|Ga0209392_1020375	All Organisms → cellular organisms → Bacteria → Proteobacteria	2110	Open in IMG/M
3300027683\|Ga0209392_1113573	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	858	Open in IMG/M
3300027693\|Ga0209704_1021716	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1639	Open in IMG/M
3300027721\|Ga0209492_1027194	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1980	Open in IMG/M
3300027721\|Ga0209492_1107509	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Chelicerata → Arachnida → Acari → Acariformes → Trombidiformes → Prostigmata	981	Open in IMG/M
3300027739\|Ga0209575_10188832	Not Available	733	Open in IMG/M
3300027739\|Ga0209575_10309669	Not Available	543	Open in IMG/M
3300027796\|Ga0209373_10063953	Not Available	1781	Open in IMG/M
3300027831\|Ga0209797_10020094	All Organisms → cellular organisms → Bacteria → Proteobacteria	3056	Open in IMG/M
3300027841\|Ga0209262_10015899	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3135	Open in IMG/M
3300027841\|Ga0209262_10038867	Not Available	2101	Open in IMG/M
3300027841\|Ga0209262_10150599	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1115	Open in IMG/M
3300027871\|Ga0209397_10096897	Not Available	1228	Open in IMG/M
3300027885\|Ga0209450_10171882	Not Available	1513	Open in IMG/M
3300027885\|Ga0209450_10211035	Not Available	1376	Open in IMG/M
3300027885\|Ga0209450_10388778	Not Available	1016	Open in IMG/M
3300027885\|Ga0209450_10609748	Not Available	797	Open in IMG/M
3300027897\|Ga0209254_10038516	All Organisms → cellular organisms → Bacteria → Proteobacteria	4236	Open in IMG/M
3300027897\|Ga0209254_10038735	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	4222	Open in IMG/M
3300027897\|Ga0209254_10047102	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3780	Open in IMG/M
3300027897\|Ga0209254_10414888	All Organisms → cellular organisms → Bacteria → Proteobacteria	994	Open in IMG/M
3300027900\|Ga0209253_10026744	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	4841	Open in IMG/M
3300027972\|Ga0209079_10012692	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2798	Open in IMG/M
3300027975\|Ga0209391_10032775	All Organisms → cellular organisms → Bacteria → Proteobacteria	2561	Open in IMG/M
3300027975\|Ga0209391_10330502	Not Available	599	Open in IMG/M
3300028608\|Ga0247819_10583597	Not Available	671	Open in IMG/M
3300028804\|Ga0268298_10343743	Not Available	761	Open in IMG/M
3300031548\|Ga0307408_101362543	Not Available	667	Open in IMG/M
3300031824\|Ga0307413_10299356	Not Available	1219	Open in IMG/M
3300031834\|Ga0315290_10014936	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	5913	Open in IMG/M
3300031834\|Ga0315290_10034546	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	4028	Open in IMG/M
3300031834\|Ga0315290_10197362	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Yersiniaceae → Serratia → Serratia marcescens	1748	Open in IMG/M
3300031834\|Ga0315290_10363968	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1267	Open in IMG/M
3300031852\|Ga0307410_10277695	Not Available	1313	Open in IMG/M
3300031854\|Ga0310904_10161165	Not Available	1314	Open in IMG/M
3300031903\|Ga0307407_11518531	Not Available	530	Open in IMG/M
3300031995\|Ga0307409_100838358	Not Available	929	Open in IMG/M
3300031995\|Ga0307409_100839059	Not Available	929	Open in IMG/M
3300032002\|Ga0307416_100348924	Not Available	1497	Open in IMG/M
3300032126\|Ga0307415_100248073	Not Available	1445	Open in IMG/M
3300032143\|Ga0315292_10971819	Not Available	706	Open in IMG/M
3300032397\|Ga0315287_12544139	Not Available	548	Open in IMG/M
3300033406\|Ga0316604_10139617	Not Available	1292	Open in IMG/M
3300033406\|Ga0316604_10142743	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1278	Open in IMG/M
3300033408\|Ga0316605_10733282	Not Available	935	Open in IMG/M
3300033413\|Ga0316603_10877664	Not Available	845	Open in IMG/M
3300033413\|Ga0316603_11510587	Not Available	637	Open in IMG/M
3300033416\|Ga0316622_100000732	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	19943	Open in IMG/M
3300033416\|Ga0316622_100380843	Not Available	1579	Open in IMG/M
3300033418\|Ga0316625_101529125	Not Available	633	Open in IMG/M
3300033419\|Ga0316601_100871199	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia → Scleractinia → Astrocoeniina	894	Open in IMG/M
3300033434\|Ga0316613_10239155	Not Available	1184	Open in IMG/M
3300033434\|Ga0316613_10627650	Not Available	734	Open in IMG/M
3300033481\|Ga0316600_10292691	Not Available	1093	Open in IMG/M
3300034052\|Ga0373889_022644	Not Available	911	Open in IMG/M
3300034053\|Ga0373890_000673	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	4171	Open in IMG/M
3300034054\|Ga0373891_056417	Not Available	631	Open in IMG/M
3300034080\|Ga0373897_065933	Not Available	694	Open in IMG/M
3300034128\|Ga0370490_0017016	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2454	Open in IMG/M
3300034128\|Ga0370490_0193967	Not Available	667	Open in IMG/M
3300034159\|Ga0370509_0397554	Not Available	510	Open in IMG/M
3300034169\|Ga0370480_0062743	Not Available	1291	Open in IMG/M
3300034420\|Ga0373918_0059370	Not Available	939	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	83.45%
Host-Associated	Host-Associated	10.07%
Engineered	Engineered	6.47%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	60.43%
Terrestrial	Environmental → Terrestrial	23.02%
Plants	Host-Associated → Plants	10.07%
Bioremediation	Engineered → Bioremediation	3.60%
Wastewater	Engineered → Wastewater	2.88%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	53.96%
Soil	Environmental → Terrestrial → Soil	23.02%
Rhizosphere	Host-Associated → Plants → Rhizosphere	7.19%
Marine	Environmental → Aquatic → Marine	4.32%
Metal	Engineered → Bioremediation → Metal	3.60%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.88%
Sediment	Environmental → Aquatic → Sediment	2.16%
Activated Sludge	Engineered → Wastewater → Activated Sludge	2.16%
Industrial Wastewater	Engineered → Wastewater → Industrial Wastewater	0.72%

Habitat	Taxonomy	Distribution
Sediment	Environmental → Aquatic → Freshwater → Sediment	23.02%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	12.95%
Lentic	Environmental → Aquatic → Freshwater → Lentic	10.79%
Pond	Environmental → Aquatic → Freshwater → Pond	8.63%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	7.91%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	7.19%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	5.04%
Lake	Environmental → Aquatic → Freshwater → Lake	4.32%
Sediment	Environmental → Aquatic → Marine → Sediment	4.32%
Unclassified	Engineered → Bioremediation → Metal → Unclassified	3.60%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.88%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	2.16%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.16%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified	2.16%
Sand	Environmental → Terrestrial → Soil → Sand	1.44%
Loam	Environmental → Terrestrial → Soil → Loam	0.72%
Mine Water	Engineered → Wastewater → Industrial Wastewater → Mine Water	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	23.02%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	12.95%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	10.79%
Sediment	Environmental → Aquatic → Freshwater → Pond → Sediment	8.63%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	7.19%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	5.04%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	4.32%
Unclassified	Environmental → Aquatic → Marine → Sediment → Unclassified	4.32%
Unclassified	Engineered → Bioremediation → Metal → Unclassified → Unclassified	3.60%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.88%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.88%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.88%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	2.16%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.16%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified	2.16%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.44%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	1.44%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	0.72%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.72%
Unclassified	Engineered → Wastewater → Industrial Wastewater → Mine Water → Unclassified	0.72%

Habitat	Taxonomy	Distribution
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	17.99%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	10.79%
Freshwater	Environmental → Aquatic → Freshwater → Pond → Sediment → Freshwater	8.63%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	8.63%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	5.76%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	4.32%
Sediment	Environmental → Aquatic → Marine → Sediment → Unclassified → Sediment	4.32%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	3.60%
Sediment Slurry	Engineered → Bioremediation → Metal → Unclassified → Unclassified → Sediment Slurry	3.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.88%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	2.88%
Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Sediment	2.16%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater	2.16%
Wetland	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland	1.44%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	1.44%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	1.44%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.44%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	1.44%
Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Sand	1.44%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.44%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.44%
Activated Sludge	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Activated Sludge	1.44%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.72%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.72%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.72%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.72%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.72%
Activated Sludge	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Activated Sludge	0.72%
Sediment	Engineered → Wastewater → Industrial Wastewater → Mine Water → Unclassified → Sediment	0.72%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090014	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300003858	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - DIP11 DI	Environmental	Open in IMG/M
3300003910	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - LWP11 LW	Environmental	Open in IMG/M
3300004151	Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - High cellulose week 5	Environmental	Open in IMG/M
3300004155	Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - Low cellulose week 11	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004242	Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - Medium cellulose week 11	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004481	Combined Assembly of Gp0112041, Gp0112042, Gp0112043	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300004778	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare3Fresh	Environmental	Open in IMG/M
3300005656	Active sludge microbial communities from Klosterneuburg, Austria, studying microevolution and ecology of nitrifiers - Klosterneuburg WWTP active sludge metagenome KNB19-Kit	Engineered	Open in IMG/M
3300005660	Active sludge microbial communities from Klosterneuburg, Austria, studying microevolution and ecology of nitrifiers - Klosterneuburg WWTP active sludge metagenome KNB14_precipitate	Engineered	Open in IMG/M
3300005827	Microbial communities from Cathlamet Bay sediment, Columbia River estuary, Oregon - S.188_CBA	Environmental	Open in IMG/M
3300005831	Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.43_YBM	Environmental	Open in IMG/M
3300005940	Groundwater microbial communities from the Columbia River, Washington, USA, for microbe roles in carbon and contaminant biogeochemistry - GW-RW metaG T4_25-Nov-14	Environmental	Open in IMG/M
3300006058	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1	Host-Associated	Open in IMG/M
3300006224	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 4 metaG	Environmental	Open in IMG/M
3300009009	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 1-3cm September2015	Environmental	Open in IMG/M
3300009037	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 1-3cm March2015	Environmental	Open in IMG/M
3300009075	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 1-3cm March2015	Environmental	Open in IMG/M
3300009085	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 10-12cm September2015	Environmental	Open in IMG/M
3300009091	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300009111	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1	Environmental	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009157	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009165	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 1-3cm September2015	Environmental	Open in IMG/M
3300009167	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG - Illumina Assembly (version 2)	Environmental	Open in IMG/M
3300009169	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm May2015	Environmental	Open in IMG/M
3300009170	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 1-3cm May2015	Environmental	Open in IMG/M
3300009448	Groundwater microbial communities from Cold Creek, Nevada to study Microbial Dark Matter (Phase II) - Cold Creek Source	Environmental	Open in IMG/M
3300009527	Groundwater microbial communities from Cold Creek, Nevada to study Microbial Dark Matter (Phase II) - Lower Cold Creek	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300013232	Sediment microbial communities from Acid Mine Drainage holding pond in Pittsburgh, PA, USA ? S1	Engineered	Open in IMG/M
3300014309	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_TuleB_D1	Environmental	Open in IMG/M
3300014312	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_CattailNLA_D1	Environmental	Open in IMG/M
3300018083	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1	Environmental	Open in IMG/M
3300021082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_coex redo	Environmental	Open in IMG/M
3300022204	Sediment microbial communities from San Francisco Bay, California, United States - SF_Jul11_sed_USGS_8_1	Environmental	Open in IMG/M
3300022213	Sediment microbial communities from San Francisco Bay, California, United States - SF_Oct11_sed_USGS_4_1	Environmental	Open in IMG/M
3300022214	Sediment microbial communities from San Francisco Bay, California, United States - SF_Jan12_sed_USGS_4_1	Environmental	Open in IMG/M
3300024895	Freshwater sediment methanotrophic microbial communities from Lake Washington under simulated oxygen tension - Sediment Metagenome 1_LOW4 (SPAdes)	Environmental	Open in IMG/M
3300025130	Groundwater microbial communities from Big Spring, Nevada to study Microbial Dark Matter (Phase II) - Ash Meadows Crystal Spring (SPAdes)	Environmental	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027547	Groundwater microbial communities from the Columbia River, Washington, USA, for microbe roles in carbon and contaminant biogeochemistry - GW-RW metaG T4_25-Nov-14 (SPAdes)	Environmental	Open in IMG/M
3300027683	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 1-3cm May2015 (SPAdes)	Environmental	Open in IMG/M
3300027693	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 1-3cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300027721	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm May2015 (SPAdes)	Environmental	Open in IMG/M
3300027739	Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - Medium cellulose week 11 (SPAdes)	Environmental	Open in IMG/M
3300027796	Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - High cellulose week 5 (SPAdes)	Environmental	Open in IMG/M
3300027831	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare3Fresh (SPAdes)	Environmental	Open in IMG/M
3300027841	Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - Low cellulose week 11 (SPAdes)	Environmental	Open in IMG/M
3300027871	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Open_0915_D1 (SPAdes)	Environmental	Open in IMG/M
3300027885	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - LWP11 LW (SPAdes)	Environmental	Open in IMG/M
3300027897	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - DIP11 DI (SPAdes)	Environmental	Open in IMG/M
3300027900	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - BRP12 BR (SPAdes)	Environmental	Open in IMG/M
3300027972	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 10-12cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300027975	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 1-3cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300028608	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Xylose_Day6	Environmental	Open in IMG/M
3300028804	Activated sludge microbial communities from WWTP in Nijmegen, Gelderland, Netherland - WWTP Weurt	Engineered	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031824	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2	Host-Associated	Open in IMG/M
3300031834	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_0	Environmental	Open in IMG/M
3300031852	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3	Host-Associated	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031903	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1	Host-Associated	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated	Open in IMG/M
3300032143	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_0	Environmental	Open in IMG/M
3300032397	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_0	Environmental	Open in IMG/M
3300033406	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day20_CT	Environmental	Open in IMG/M
3300033408	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day20_noCT	Environmental	Open in IMG/M
3300033413	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day10_noCT	Environmental	Open in IMG/M
3300033416	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_OW2_C1_D5_C	Environmental	Open in IMG/M
3300033418	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_T1_C1_D1_A	Environmental	Open in IMG/M
3300033419	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day5_noCT	Environmental	Open in IMG/M
3300033434	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day10_CT_b	Environmental	Open in IMG/M
3300033481	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day5_CT	Environmental	Open in IMG/M
3300034052	Uranium-contaminated sediment microbial communities from bioreactor in Oak Ridge, Tennessee, United States - A1A4.2	Engineered	Open in IMG/M
3300034053	Uranium-contaminated sediment microbial communities from bioreactor in Oak Ridge, Tennessee, United States - A1A4.3	Engineered	Open in IMG/M
3300034054	Uranium-contaminated sediment microbial communities from bioreactor in Oak Ridge, Tennessee, United States - A3A4.1	Engineered	Open in IMG/M
3300034080	Uranium-contaminated sediment microbial communities from bioreactor in Oak Ridge, Tennessee, United States - A5A4.1	Engineered	Open in IMG/M
3300034128	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_06D_16	Environmental	Open in IMG/M
3300034159	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_0210_18	Environmental	Open in IMG/M
3300034169	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_02D_15	Environmental	Open in IMG/M
3300034420	Uranium-contaminated sediment microbial communities from bioreactor in Oak Ridge, Tennessee, United States - A1A4.1	Engineered	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPIPI_00562870	2088090014	Soil	MERLLKWLDDCDDLLVVFRAQAPAVLVTASLVVAFVVALATLFLLGPPDLLAAP
INPhiseqgaiiFebDRAFT_1015250492	3300000364	Soil	MERLLKWLDDCDDLLVVFRAQAPAVLVTASLVVAFVVALATLFLLGPPDLLAAP*
JGI10216J12902_1086830412	3300000956	Soil	MERVLKLLDDCDDLMVVFRVQGPAVVVTAALAAALLTGLGLFLLLGAPDLHAAH*
JGI10216J12902_1196968002	3300000956	Soil	MERILKLLDDCDDLMVVFRVQAPAVVVTATLAAALLTGLGVLMLLGAPDLQAAP*
Ga0031656_100024888	3300003858	Freshwater Lake Sediment	MERLLKWLDDLDDLTDVFRVQAPAVIITVLLVVVFAAGVGALLLLGPPDLLAAP*
Ga0031656_100185553	3300003858	Freshwater Lake Sediment	MERLLKWLDDLDDLTDVFRVQAPSVIVTALLVVAFVAGLGALLLLGPPDLLAAP*
Ga0031656_100313242	3300003858	Freshwater Lake Sediment	MERLLKWLDDLDDLTDVFRVQAPSVIITALLVVAFVAGLGALLLFGPPELLAAP*
Ga0031656_102189601	3300003858	Freshwater Lake Sediment	MEXLLKWFDNFDDLMDVFRLQAPAVVVTVLLAVAFVAGVGALLLLGPPNLLAAP*
Ga0031656_102322982	3300003858	Freshwater Lake Sediment	MERLLKWLDDLDDLTDVFRLQAPSVIITVLLVVVFAAGVGALLLLGPPDLLAAP*
JGI26437J51864_100827342	3300003910	Freshwater Lake Sediment	MERLLKWLDELDDLTDVFRVQAPSVIITALLVVAFAAGVGALLLLGPPDLLAAP*
Ga0066602_100180323	3300004151	Freshwater	MERLLKWFDNFDDLMDVFRLQAPAVVVTVLLAVAFVAGVGALLLLGPPNLLAAP*
Ga0066602_103849691	3300004151	Freshwater	MERLLKCLDDLDDLTVVFRVQAPAVIVTALLAVAFVAGLGALLVLGPPDLLAAP*
Ga0066602_104625162	3300004151	Freshwater	MERLLKWLDDLDDLTDVFRVQAPSVIITALLVAAFIAGIWTLLLLGPPDLLAAP*
Ga0066600_101369913	3300004155	Freshwater	MERLLKWLDDLDDLTDVFRVQAPSVIITALLVAAFIAGIGTLLLLGPPDLLAAP*
Ga0066600_101998352	3300004155	Freshwater	MERLLKWLDDLDDLTVVFRVQAPAVIVTAVLVVAFVAGLGALLLLGPPDLLAAP*
Ga0062589_1008008822	3300004156	Soil	MERLLKWLDDVDDVMVVFRVQAPALLTMLLLVTAFCAGLGALPLLAPPDLLAAP*
Ga0062589_1009266102	3300004156	Soil	MERLLKWLDDVDDLMVLFRVQAPAVLTTLLLAAVFCAGMGALLLLGPPDLLAAP*
Ga0066601_101734183	3300004242	Freshwater	MERLLKWFDNFDDLMDVFRLQAPAVVVTVLLAVAFVAGVGALLL
Ga0063356_1010362413	3300004463	Arabidopsis Thaliana Rhizosphere	MERLVKWLDDCDDLLVVFRAQAPAVLVTVALGAAFLVGVGAFLLLGAPDLLAAP*
Ga0063356_1039575972	3300004463	Arabidopsis Thaliana Rhizosphere	MERLLKWLDDCDDLMVVFRVQAPALIVTATLAAAFLAGLGVFLMLGAPDLHAAP*
Ga0069718_100971303	3300004481	Sediment	MERLLKWLDDLDDLTDVFRVQAPSVIITALLVVAFVAGLGALLLLGPPDLLAAP*
Ga0069718_159896062	3300004481	Sediment	MERLLKWLDDLDDLTDVFRVQAPSVIITALLVVAFAAGVGALLLLGPPDLLAAP*
Ga0069718_160381421	3300004481	Sediment	LDDLDDLTDVFRVQAPSVIITALLVAAFIAGIGALLLLGPPDLLAAP*
Ga0062591_1000808531	3300004643	Soil	CTKVSAPIARMERLLKWLDDVDDLMVLFRVQAPAVLTTLLLAAVFCAGMGALLLLGPPDLLAAP*
Ga0062591_1015709742	3300004643	Soil	MERLLKCLDDLDDLTVVFRVQARAAIVTAVLTVAFVAGLGALLLLGPPDLLAAP*
Ga0062383_100580573	3300004778	Wetland Sediment	MELLLKWLDDLDDLTDVFRVQAPSVIITALLVVAFVAGLGALLLLGPPDLLAAP*
Ga0073902_102682733	3300005656	Activated Sludge	PFRLESAPGPNSMERLLKWLDDLDDLTDVFRVQASSVIITALLVVAFAAGVGALLLLGPPDLLAAP*
Ga0073904_102260402	3300005660	Activated Sludge	MERLLKWLDDLDDLTDVFRVQASSVIITALLVVAFAAGVGALLLLGPPDLLAAP*
Ga0074478_18630352	3300005827	Sediment (Intertidal)	MERLLKCLDDLDDLTVVFRVQAPAVIVTALLAVVFVAGLGALLLLGPPDLLAAP*
Ga0074471_109363766	3300005831	Sediment (Intertidal)	MERLLKCLDDLDDLTVVFRVQAPAVIITALLAVVFVAGLGALLLLGPPDLLAAP*
Ga0073913_100448302	3300005940	Sand	MERLLKWLDDLDDLMDVFRLQAPAVVVTALLMAAFIAGIGALLLLGPPDLLAAP*
Ga0075432_103053551	3300006058	Populus Rhizosphere	MERLLKWLDDVDDVMVVFRVQAPALLTMLLLVTAFCAGVGALLLLAPPELLAAP*
Ga0079037_1000084906	3300006224	Freshwater Wetlands	MERLLKWLDDLDDFTVVFRVQAPSVIITALLVLAFVAGLGALLLLGPPDLLAAP*
Ga0079037_1000125944	3300006224	Freshwater Wetlands	MERLLKWLDDLDDLTDVFRVQAPSVIIAALLVAAFVAGIGALLLLGPPDLLAAP*
Ga0079037_1000552673	3300006224	Freshwater Wetlands	MERLLKWLDDLDDLAVVFRAQAPSVIITALLAVAFVAGLGALLLLGPPDLLAAP*
Ga0105105_102290633	3300009009	Freshwater Sediment	MERLLKCLDDLDDLTVVFRVQAPAVIVTALLAVAFVAGLGVLLVLGPPDLLAAP*
Ga0105105_102587351	3300009009	Freshwater Sediment	MERLLKWLDDLDDLTDVFRVQAPSVIITALLVVVFAAGVGALLLLGPPDLLAAP*
Ga0105105_103569571	3300009009	Freshwater Sediment	MERLLKWLDEFDDLLDVFRLQAPSVMVTALLAVGFGAGIAALLLLGPPLLHAAP*
Ga0105093_100596893	3300009037	Freshwater Sediment	MERLLKCLDDLDDLTVVFRVQAPAVIVTALLAVAFVAGLGVLLLLGPPDLLAAP*
Ga0105090_100236842	3300009075	Freshwater Sediment	MERLLKWLDDLDDLTDVFRVQAPSVIITALLVVAFVTGIGALLLLGPPDLLAAP*
Ga0105090_100999244	3300009075	Freshwater Sediment	MERLLKWLDDCDDMLDVFRLLAPAVMITALLAVVFVTGVAAMLLLGPPDLLAAP*
Ga0105090_101230073	3300009075	Freshwater Sediment	MEILLKWLDDCDDLLAVWRVQAPAIAVTAVLAAVFLAGLGALFLLGPPDLLAAH*
Ga0105090_102728192	3300009075	Freshwater Sediment	MERLLKWLDDLDDLTDVFRVQAPSVIITALLVAAFVAGIGALLLLGPPDLLAAP*
Ga0105090_105408533	3300009075	Freshwater Sediment	PMERLLKCLDDLDDLTVVFRVQAPAVIVTALLAVAFVAGLGALLVLGPPDLLAAP*
Ga0105090_106537231	3300009075	Freshwater Sediment	MEILLKWLDDCDDLLAVWRVQAPAIAVTAVLAAVFLAGLGALFLLGPPDLLAAP*
Ga0105103_100243693	3300009085	Freshwater Sediment	MERLLKWLDDCDDMLDVFRLLAPAVMITALLAVVFVTGVAALLLLGPPDLLAAP*
Ga0102851_127930161	3300009091	Freshwater Wetlands	MERLLKWLDDLDDLTVVFRAQAPSVIITALLAVAFVAGLGALLLLGPPDLLAAP*
Ga0115026_119076151	3300009111	Wetland	MERLLKWLDDLDDLGAVFRVQAPAVFVTVALLAVFLAAIGAVLVFGPPDLLAAP*
Ga0111538_112743703	3300009156	Populus Rhizosphere	MERLLKWLDDVDDVMVVFRVQAPALLTMLLLVTAFCAGLGALLLLAPPELLAAP*
Ga0105092_107239042	3300009157	Freshwater Sediment	MERLLKWLDDLDDLLVVFRVQAPAAIATALLLAGFAASVGAVLVLGPPDLLAAP*
Ga0105102_105211582	3300009165	Freshwater Sediment	MERLLKWLDDCDDLLDVFRLLAPAVMITALLAMVFVTGVAALLLLGAPDLLAAP*
Ga0113563_104942204	3300009167	Freshwater Wetlands	KWLDELDDLTDVFRVQAPSVIITALLVVAFAAGVGALLLLGPPDLLAAP*
Ga0105097_102580451	3300009169	Freshwater Sediment	MERLLKCLDDLDDLTVVFRVQAPAVIVTALLAVAFIAGLGALLVLGPPDLLAAP*
Ga0105097_106290502	3300009169	Freshwater Sediment	DDLDDLTVVFRVQAPAVIVTALLAVAFVAGLGALLVLGPPDLLAAP*
Ga0105096_101072521	3300009170	Freshwater Sediment	MERLLKWLDDLDDLTDVFRVQAPSVIITALLVVAFVTGIGALLLLGPPD
Ga0105096_102842273	3300009170	Freshwater Sediment	CLDDLDDLTVVFRVQAPAVIVTALLAVAFVAGLGALLVLGPPDLLAAP*
Ga0114940_102913433	3300009448	Groundwater	MERLLKWLDDLDDLTVVFRVQAPAVIVTSLLVVAFVAGLAALLLLGPPDLLAAP*
Ga0114942_13720711	3300009527	Groundwater	MERLLKWLDDLDDLMVVFRAQAPAVIVTAVLAVVFVAGLAALLLLGPPDLHAAP*
Ga0164300_106678572	3300012951	Soil	MERLLKWLDDVDDLLVVFRVQAPAILTTVLLAVAFCAGLGTLLLLGPPD
Ga0170573_109893453	3300013232	Sediment	MERLLKWLDDLDDLTVVFRVQAPSVIITALLVVAFVAGLGALLLLGPPDLLAAH*
Ga0075317_10123693	3300014309	Natural And Restored Wetlands	MERLLKCLDDLDDLTVVFRVQAPAVIVTALLAVAFVAGFGALLLLGPPVLLAAP*
Ga0075345_11398622	3300014312	Natural And Restored Wetlands	MERLLKCLDDLDDLTVVFRVQAPAVIFTALLAVAFVAGFAALLLLGPPDLLAAP*
Ga0184628_101805523	3300018083	Groundwater Sediment	MERLLKWLDDLDDLGVVFRVQAPAVFVTVALLAVFLAAIGAVLVFGPP
Ga0210380_101313943	3300021082	Groundwater Sediment	MERLLKWLDDLDDLTVVFRVQAPAVIVTGLLVVAFVAGLAALLLLGPPDLHAAP
Ga0224496_100616714	3300022204	Sediment	MERLLKCLDDLDDLTVVFRVQAPAVIITALLAVVFVAGLGALLLLGPPDLLAAP
Ga0224500_1000066710	3300022213	Sediment	MELLLKWLDDLDDLTDVFRVQAPSVIIAAALVVAFVAGLGALLLLGPPDLLAAP
Ga0224500_101643043	3300022213	Sediment	MERLLKWLDDLDDLTDVFRVQAPSVIITALLVMAFVAGLGALLLLGPLDLLAAP
Ga0224500_101736071	3300022213	Sediment	MERLLKCLDDLDDLMVVFRVQAPAVIVTALLAVVFVAGLGALLLLGPPDLLAAP
Ga0224500_102794842	3300022213	Sediment	MERLLKCLDDLDDLTVVFRVQAPAVIFTALLAVAFVAGFAALLLLGPPDLLAAP
Ga0224505_100291204	3300022214	Sediment	MERLLKWLDDLDDLTDVFRVQAPSVIITALLVMAFVAGLGALVLLGPLDLLAAP
Ga0208508_10283193	3300024895	Freshwater Sediment	MERLLKWLDDLDDLTDVFRVQAPSVIITALLVVAFVAGLGALLLLGPPDLLAAP
Ga0209594_10133743	3300025130	Groundwater	MERLLKCLDDLDDLTVVFRVQAPAVILTALLAVAFVAGFGALLLLGPPDLLAAP
Ga0207670_118859392	3300025936	Switchgrass Rhizosphere	ERLLKWLDDVDDLMVLFRVQAPAVLTTLLLAAVFCAGMGALLLLGPPDLLAAP
Ga0207689_105296994	3300025942	Miscanthus Rhizosphere	MERLLKWLDDVDDLMVLFRVQAPAVLTTLLLAAVFCAGMGALLLLGPPDLLAAP
Ga0207641_118190401	3300026088	Switchgrass Rhizosphere	VSAPIARMERLLKWLDDVDDLMVLFRVQAPAVLTTLLLAAVFCAGMGALLLLGPPDLLAA
Ga0209864_10606401	3300027547	Sand	MERLLKWLDDLDDLMDVFRLQAPAVVVTALLMAAFIAGIGALLLLGPPDLLAAP
Ga0209392_10203754	3300027683	Freshwater Sediment	MERLLKCLDDLDDLTVVFRVQAPAVIVTALLAVAFVAGLGVLLVLGPPDLLAAP
Ga0209392_11135733	3300027683	Freshwater Sediment	FTPRPGPMERLLKCLDDLDDLTVVFRVQAPAVIVTALLAVAFVAGLGALLVLGPPDLLAA
Ga0209704_10217163	3300027693	Freshwater Sediment	MERLLKCLDDLDDLTVVFRVQAPAVIVTALLAVAFVAGLGVLLVLGQPDLLAAP
Ga0209492_10271944	3300027721	Freshwater Sediment	MERLLKWLDDLDDLTDVFRVQAPSVIITALLVVAFVTGIGALLLLGPPDLLAAP
Ga0209492_11075092	3300027721	Freshwater Sediment	MEILLKWLDDCDDLLAVWRVQAPAIAVTAVLAAVFLAGLGALFLLGPPDLLAAP
Ga0209575_101888321	3300027739	Freshwater	MERLLKWFDNFDDLMDVFRLQAPAVVVTVLLAVAFVAGVGALLLLGPP
Ga0209575_103096691	3300027739	Freshwater	EFGLQFTSRSGPMERLLKWLDDLDDLTDVFRLQAPSVIITVLLVVVFAAGVGALLLLGPPDLLAAP
Ga0209373_100639532	3300027796	Freshwater	MERLLKWFDNFDDLMDVFRLQAPAVVVTVLLAVAFVAGVGALLLLGPPNLLAAP
Ga0209797_100200945	3300027831	Wetland Sediment	MELLLKWLDDLDDLTDVFRVQAPSVIITALLVVAFVAGLGALLLLGPPDLLAAP
Ga0209262_100158994	3300027841	Freshwater	MERLLKWLDDLDDLTDVFRLQAPSVIITVLLVVVFAAGVGALLLLGPPDLLAAP
Ga0209262_100388673	3300027841	Freshwater	MERLLKCLDDLDDLTVVFRVQAPAVIVTALLAVAFVAGLGALLVLGPPDLLAAP
Ga0209262_101505993	3300027841	Freshwater	MERLLKWLDDLDDLTDVFRVQAPSVIITALLVAAFIAGIGTLLLLGPPDLLAAP
Ga0209397_100968973	3300027871	Wetland	MERLLKWLDDLDDFTVVFRVQAPSVIITALLVLAFVAGLGALLLLGPPDLLAAP
Ga0209450_101718821	3300027885	Freshwater Lake Sediment	MERLLKWLDDLDDLTDVFRVQAPSVIITALLVVAFVTGIGALLLLGPP
Ga0209450_102110353	3300027885	Freshwater Lake Sediment	MERLLKCLDDLDDLTVVFRVQAPAVIVTALLAVAFVAGLGVLLLLGPPDLLAAP
Ga0209450_103887782	3300027885	Freshwater Lake Sediment	MERLLKWLDDLDDLTDVFRVQAPSVIITALLVAAFVAGIGALLLLGPPDLLAAP
Ga0209450_106097482	3300027885	Freshwater Lake Sediment	MERLLKWLDDCDDMLDVFRLLAPAVMITALLAVVFVTGVVALLLLGPPDLLAAP
Ga0209254_100385163	3300027897	Freshwater Lake Sediment	MERLLKWLDDLDDLTDVFRVQAPAVIITVLLVVVFAAGVGALLLLGPPDLLAAP
Ga0209254_100387353	3300027897	Freshwater Lake Sediment	MERLLKWLDDLDDLTDVFRVQAPSVIITALLVVAFVAGLGALLLFGPPELLAAP
Ga0209254_100471025	3300027897	Freshwater Lake Sediment	MERLLKWLDDLDDLTDVFRVQAPSVIVTALLVVAFVAGLGALLLLGPPDLLAAP
Ga0209254_104148883	3300027897	Freshwater Lake Sediment	MERLLKWLDDLDDLMDVFRLQAPAAVVTALLMAAFIAGIGALLLLGPPDLLAAP
Ga0209253_100267447	3300027900	Freshwater Lake Sediment	MERLLKWFDDFDDLMDVFRLQAPAVVVTVLLAVAFVAGVGALLLLGPPNLFAAP
Ga0209079_100126923	3300027972	Freshwater Sediment	MERLLKWLDDCDDMLDVFRLLAPAVMITALLAVVFVTGVAALLLLGPPDLLAAP
Ga0209391_100327752	3300027975	Freshwater Sediment	MEILLKWLDDCDDLLAVWRVQAPAIAVTAVLAAVFLAGLGAMLLLGPPDLLAAH
Ga0209391_103305022	3300027975	Freshwater Sediment	MERLLKWLDDCDDMLDVFRLLAPAVMITALLAVVFVTGVAAMLLLGPPDLLAAP
Ga0247819_105835972	3300028608	Soil	MESILRWLDDCDDLLVVFHVQAPAIMVTLALTTAFFLGLGTFLVLGAPDLHAAP
Ga0268298_103437433	3300028804	Activated Sludge	ADTMHRLLMWLDDCDDLLVVFRVQAPAVIATALLATACLAGLGALMLFGVPELHAAP
Ga0307408_1013625432	3300031548	Rhizosphere	MERLVKWLDDCDDLLVVFRAQAPAVLVTVALGAAFLVGVGAFLLLGAPDLLAAP
Ga0307413_102993562	3300031824	Rhizosphere	MERLVKWLDDCDDLMVVFRVQAPAIAVTAAVAAALLTGLGVFLLFGASDLHAAH
Ga0315290_100149362	3300031834	Sediment	MERLLKWLDDLDDLADVFRVQAPAVIITALLVVAFVAGLGALLLLGPSDLLAAP
Ga0315290_100345463	3300031834	Sediment	MERLLKWLDDLDDLTVVFRVQAPSVIITALLVVAFVAGLGALLLLGPPDLLAAP
Ga0315290_101973621	3300031834	Sediment	MERLLKWFDNFDDLMDVFRLQAPAVVVTVLLAVAFVAGVGALLLLGPPNLFAAP
Ga0315290_103639684	3300031834	Sediment	GLKSDSRPEPMERLLKWFDNFDDLMDVFRLQAPAVVVTVLLVVAFVAGVGALLLLGPPNLLAAP
Ga0307410_102776954	3300031852	Rhizosphere	DDCDDLMVVFRVQAPAIAVTAAVAAALLTGLGVFLLFGASDLHAAH
Ga0310904_101611653	3300031854	Soil	MERLLKLLDDCDDLLVVFRVQAPAIAVTAALGAAFLAGLGAFLLLGAPDLLAAP
Ga0307407_115185312	3300031903	Rhizosphere	MERLVKWLDDCDDLMVVFRVQAPAIAVTAAVAAAMLTGLGVFLLFGASDLHAAH
Ga0307409_1008383582	3300031995	Rhizosphere	MERLVKWLDDCDDLMVVFRVQAPAIAVTAAVAAALLTALGVFLLLGASDLHAAH
Ga0307409_1008390592	3300031995	Rhizosphere	MERLVKWLDDCDDLLVVFRAQAPAVLVTAALGAAFLVGVGAFLLLGAPDLLAAP
Ga0307416_1003489242	3300032002	Rhizosphere	MELILKLLDDCDDLMVVFRVQAPAVVVTATLAAALLTGLGVLMLLGAPDLQAAP
Ga0307415_1002480732	3300032126	Rhizosphere	MERLVKWLDDCDDLMVVFRVQAPAIAMTAAVAAALLTGLGVFLLFGASDLHAAH
Ga0315292_109718192	3300032143	Sediment	MERLLKWLDDLDDLTDVFRVQAPSVIITALLVLAFVAGLGALLLLGPPDLLAAP
Ga0315287_125441392	3300032397	Sediment	SGLKSDSRPEPMERLLKWFDNFDDLMDVFRLQAPAVVVTVLLVVAFVAGVGALLLLGPPNLFAAP
Ga0316604_101396172	3300033406	Soil	MERLLKWLDELDDLTDVFRVQAPSVIITALLVVAFAAGVGALLLLGPPDLLAAP
Ga0316604_101427434	3300033406	Soil	KWLDDCDDLLAVWRVQAPAIAVTAVLAAVFLAGLGALFLLGPPDLLAAP
Ga0316605_107332822	3300033408	Soil	MEILLKWLDECDDLLVVLRVQGPAVALTLALVAVFLAGLGVLLLLGPADLLAAP
Ga0316603_108776642	3300033413	Soil	MEILLKWLDECDDLLVVFRVHGPAIALTLALVAVFLAGLGALLLLGPADLLAAP
Ga0316603_115105871	3300033413	Soil	AAMFRVSAPAVIVTALLVVAFVVALGAMFLIGPPDLHAAP
Ga0316622_10000073211	3300033416	Soil	MERLLKWLDDLDDLTDVFRVQAPSVIIAALLVAAFVAGIGALLLLGPPDLLAAP
Ga0316622_1003808434	3300033416	Soil	MERLLKWLDDLDDLAVVFRAQAPSVIITALLAVAFVAGLGALLLLGPPDLLAAP
Ga0316625_1015291252	3300033418	Soil	MERLLKWLDDLDDLTVVFRAQAPSVIITALLAVAFVAGLGALLLLGPPDLLAAP
Ga0316601_1008711992	3300033419	Soil	MERLLKWLDDLDDLTVVFRVQAPAVIVTAVLVVAFVAGLGALLLLGPPDLLAAP
Ga0316613_102391551	3300033434	Soil	RLKSVSRPDPMERLLKWLDDLDDFTVVFRVQAPSVIITALLVLAFVAGLGALLLLGPPDLLAAP
Ga0316613_106276501	3300033434	Soil	APGPNSMERLLKWLDELDDLTDVFRVQAPSVIITALLVVAFAAGVGALLLLGPPDLLAAP
Ga0316600_102926913	3300033481	Soil	MEILLKWLDECDDLLVVFRVQGPAIALTLALVAVFLAGLGALLLLGPADLLAAP
Ga0373889_022644_154_318	3300034052	Sediment Slurry	MERLLKWLDDCDDLLDVFRLLAPAAMVTALLALVFVTGVAALLLLGPPDLLAAP
Ga0373890_000673_2982_3146	3300034053	Sediment Slurry	MERLLKWLDDCDDLLDMFRLLAPAVMVTALLALVFVTGVAALLLLGPPDLLAAP
Ga0373891_056417_250_414	3300034054	Sediment Slurry	MERLLKWLDDLDDLTVVFRVQAPAVILTALLVVAFFAGLGALLLLGPPDLLAAP
Ga0373897_065933_1_156	3300034080	Sediment Slurry	MERLLKWLDDCDDLLDMFRLLAPAVMVTALLALVFVTGVAALLLLGPPDLLA
Ga0370490_0017016_2317_2454	3300034128	Untreated Peat Soil	DLDDLTVVFRVQAPAVIVTAVLVVAFVAGLGALLLLGPPDLLAAP
Ga0370490_0193967_1_135	3300034128	Untreated Peat Soil	MERLLKWLDDCDDLLVVFRVQAPAVAVTALLVATFLVGLGALLLL
Ga0370509_0397554_290_454	3300034159	Untreated Peat Soil	MERLLKWLDDLDDLADVFRLQAPAVLVTAALVVAFVAGFGALLLLGPPDLLAAP
Ga0370480_0062743_1146_1289	3300034169	Untreated Peat Soil	LDDLDDLTVVFRVQAPAVIVTAVLIVAFVAGLGALLLLGPPDLLAAP
Ga0373918_0059370_789_938	3300034420	Sediment Slurry	KCLDDLDDLTVVFRAQAPAVIVTALLAVAFVAGFGALLLLGPPDLLAAP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F054984

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences