Metagenome / Metatranscriptome Family F054959

Basic Information
Family ID	F054959
Family Type	Metagenome / Metatranscriptome
Number of Sequences	139
Average Sequence Length	73 residues
Representative Sequence	MISYEELDRALARWKARTKGGTVEAPAPYADSQATPMPIRAEELGSIPNAVSPIPGERTGEIDANELVESYDEAE
Number of Associated Samples	112
Number of Associated Scaffolds	139

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	36.69 %
% of genes near scaffold ends (potentially truncated)	27.34 %
% of genes from short scaffolds (< 2000 bps)	89.21 %
Associated GOLD sequencing projects	100
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.26

Most Common Taxonomy
Group	Bacteria (73.381 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (13.669 % of family members)
Environment Ontology (ENVO)	Unclassified (33.813 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (53.237 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 21.36% β-sheet: 0.00% Coil/Unstructured: 78.64%
Feature Viewer

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Pfam ID	Name	% Frequency in 139 Family Scaffolds
PF00005	ABC_tran	20.86
PF12848	ABC_tran_Xtn	12.95
PF13185	GAF_2	0.72
PF16870	OxoGdeHyase_C	0.72
PF00216	Bac_DNA_binding	0.72
PF02514	CobN-Mg_chel	0.72
PF00892	EamA	0.72

COG ID	Name	Functional Category	% Frequency in 139 Family Scaffolds
COG0776	Bacterial nucleoid DNA-binding protein IHF-alpha	Replication, recombination and repair [L]	0.72
COG1429	Cobalamin biosynthesis protein CobN, Mg-chelatase	Coenzyme transport and metabolism [H]	0.72

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	73.38 %
Unclassified	root	N/A	26.62 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	73.38 %
Unclassified	root	N/A	26.62 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	73.38 %
Unclassified	root	N/A	26.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.62 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	8.63 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	7.19 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	4.32 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.62 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	7.19 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	3.60 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.72 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.72 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.62 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	6.47 %
Phycisphaerae	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae	3.60 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	0.72 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.72 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.72 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.62 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	6.47 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → environmental samples	3.60 %
Frankiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales	0.72 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.72 %
Verrucomicrobia bacterium ADurb.Bin122	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium ADurb.Bin122	0.72 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.62 %
Solirubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae	6.47 %
uncultured Phycisphaerae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → environmental samples → uncultured Phycisphaerae bacterium	3.60 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → environmental samples	0.72 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.72 %
Verrucomicrobia bacterium ADurb.Bin122	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium ADurb.Bin122	0.72 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.62 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → environmental samples	6.47 %
uncultured Phycisphaerae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → environmental samples → uncultured Phycisphaerae bacterium	3.60 %
uncultured Frankineae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → environmental samples → uncultured Frankineae bacterium	0.72 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.72 %
Verrucomicrobia bacterium ADurb.Bin122	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium ADurb.Bin122	0.72 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.62 %
uncultured Solirubrobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → environmental samples → uncultured Solirubrobacteraceae bacterium	6.47 %
uncultured Phycisphaerae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → environmental samples → uncultured Phycisphaerae bacterium	3.60 %
uncultured Frankineae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → environmental samples → uncultured Frankineae bacterium	0.72 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.72 %
Verrucomicrobia bacterium ADurb.Bin122	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium ADurb.Bin122	0.72 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.72 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_104905475	All Organisms → cellular organisms → Bacteria	643	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_105398709	Not Available	1071	Open in IMG/M
3300000891\|JGI10214J12806_11884117	All Organisms → cellular organisms → Bacteria	563	Open in IMG/M
3300000953\|JGI11615J12901_10371614	All Organisms → cellular organisms → Bacteria	1086	Open in IMG/M
3300002128\|JGI24036J26619_10011313	All Organisms → cellular organisms → Bacteria	1605	Open in IMG/M
3300004047\|Ga0055499_10021637	All Organisms → cellular organisms → Bacteria	865	Open in IMG/M
3300004114\|Ga0062593_100191348	All Organisms → cellular organisms → Bacteria → Proteobacteria	1616	Open in IMG/M
3300004114\|Ga0062593_101773658	Not Available	677	Open in IMG/M
3300004156\|Ga0062589_102596687	Not Available	526	Open in IMG/M
3300004463\|Ga0063356_100435132	All Organisms → cellular organisms → Bacteria	1704	Open in IMG/M
3300004480\|Ga0062592_102310680	All Organisms → cellular organisms → Bacteria	538	Open in IMG/M
3300004633\|Ga0066395_10000131	All Organisms → cellular organisms → Bacteria → Proteobacteria	27166	Open in IMG/M
3300004801\|Ga0058860_11386970	All Organisms → cellular organisms → Bacteria	526	Open in IMG/M
3300005290\|Ga0065712_10509973	All Organisms → cellular organisms → Bacteria	625	Open in IMG/M
3300005328\|Ga0070676_10010015	All Organisms → cellular organisms → Bacteria → Proteobacteria	5131	Open in IMG/M
3300005328\|Ga0070676_10211049	All Organisms → cellular organisms → Bacteria	1278	Open in IMG/M
3300005328\|Ga0070676_11547036	All Organisms → cellular organisms → Bacteria	512	Open in IMG/M
3300005329\|Ga0070683_100375416	All Organisms → cellular organisms → Bacteria	1355	Open in IMG/M
3300005329\|Ga0070683_100393705	All Organisms → cellular organisms → Bacteria	1321	Open in IMG/M
3300005330\|Ga0070690_101095191	Not Available	631	Open in IMG/M
3300005331\|Ga0070670_100041087	All Organisms → cellular organisms → Bacteria	3975	Open in IMG/M
3300005332\|Ga0066388_101236119	All Organisms → cellular organisms → Bacteria	1281	Open in IMG/M
3300005340\|Ga0070689_100545121	All Organisms → cellular organisms → Bacteria → Proteobacteria	999	Open in IMG/M
3300005354\|Ga0070675_100502411	All Organisms → cellular organisms → Bacteria	1093	Open in IMG/M
3300005356\|Ga0070674_101214201	All Organisms → cellular organisms → Bacteria → Proteobacteria	670	Open in IMG/M
3300005364\|Ga0070673_101743038	All Organisms → cellular organisms → Bacteria	590	Open in IMG/M
3300005365\|Ga0070688_100658932	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → environmental samples → uncultured Solirubrobacteraceae bacterium	807	Open in IMG/M
3300005367\|Ga0070667_100282802	All Organisms → cellular organisms → Bacteria	1490	Open in IMG/M
3300005456\|Ga0070678_100440810	All Organisms → cellular organisms → Bacteria	1139	Open in IMG/M
3300005458\|Ga0070681_10737070	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → environmental samples → uncultured Solirubrobacteraceae bacterium	902	Open in IMG/M
3300005466\|Ga0070685_11366178	All Organisms → cellular organisms → Bacteria	543	Open in IMG/M
3300005535\|Ga0070684_100004260	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	10843	Open in IMG/M
3300005535\|Ga0070684_100866316	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → environmental samples → uncultured Solirubrobacteraceae bacterium	846	Open in IMG/M
3300005535\|Ga0070684_102310457	Not Available	507	Open in IMG/M
3300005543\|Ga0070672_101323157	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	644	Open in IMG/M
3300005569\|Ga0066705_10050505	All Organisms → cellular organisms → Bacteria	2335	Open in IMG/M
3300005578\|Ga0068854_100583976	All Organisms → cellular organisms → Bacteria	952	Open in IMG/M
3300005618\|Ga0068864_101386037	All Organisms → cellular organisms → Bacteria	705	Open in IMG/M
3300005713\|Ga0066905_102060642	Not Available	530	Open in IMG/M
3300005764\|Ga0066903_104486456	All Organisms → cellular organisms → Bacteria	745	Open in IMG/M
3300005836\|Ga0074470_10575193	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → environmental samples → uncultured Phycisphaerae bacterium	1875	Open in IMG/M
3300005841\|Ga0068863_102448526	Not Available	531	Open in IMG/M
3300005844\|Ga0068862_100076810	All Organisms → cellular organisms → Bacteria	2890	Open in IMG/M
3300006046\|Ga0066652_100401438	All Organisms → cellular organisms → Bacteria	1249	Open in IMG/M
3300006237\|Ga0097621_100246612	All Organisms → cellular organisms → Bacteria → Proteobacteria	1563	Open in IMG/M
3300006237\|Ga0097621_100631544	Not Available	981	Open in IMG/M
3300006358\|Ga0068871_101192243	All Organisms → cellular organisms → Bacteria	714	Open in IMG/M
3300006871\|Ga0075434_101152650	All Organisms → cellular organisms → Bacteria → Proteobacteria	788	Open in IMG/M
3300009100\|Ga0075418_12769133	All Organisms → cellular organisms → Bacteria	535	Open in IMG/M
3300009156\|Ga0111538_12659370	All Organisms → cellular organisms → Bacteria	627	Open in IMG/M
3300009157\|Ga0105092_10628652	Not Available	621	Open in IMG/M
3300009609\|Ga0105347_1093021	All Organisms → cellular organisms → Bacteria	1130	Open in IMG/M
3300010362\|Ga0126377_12194258	Not Available	628	Open in IMG/M
3300010366\|Ga0126379_11442422	All Organisms → cellular organisms → Bacteria → Proteobacteria	794	Open in IMG/M
3300010397\|Ga0134124_11491439	All Organisms → cellular organisms → Bacteria	704	Open in IMG/M
3300010397\|Ga0134124_12763828	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → environmental samples → uncultured Solirubrobacteraceae bacterium	534	Open in IMG/M
3300010400\|Ga0134122_11230449	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → environmental samples → uncultured Phycisphaerae bacterium	752	Open in IMG/M
3300011432\|Ga0137428_1069424	All Organisms → cellular organisms → Bacteria	960	Open in IMG/M
3300011434\|Ga0137464_1053086	All Organisms → cellular organisms → Bacteria	1139	Open in IMG/M
3300011435\|Ga0137426_1037825	All Organisms → cellular organisms → Bacteria	1233	Open in IMG/M
3300011440\|Ga0137433_1048944	Not Available	1254	Open in IMG/M
3300012159\|Ga0137344_1050671	Not Available	737	Open in IMG/M
3300012212\|Ga0150985_111770208	All Organisms → cellular organisms → Bacteria	649	Open in IMG/M
3300012212\|Ga0150985_117664431	Not Available	704	Open in IMG/M
3300012353\|Ga0137367_10286721	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → environmental samples → uncultured Solirubrobacteraceae bacterium	1180	Open in IMG/M
3300012354\|Ga0137366_10277964	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → environmental samples → uncultured Solirubrobacteraceae bacterium	1236	Open in IMG/M
3300012469\|Ga0150984_114515518	All Organisms → cellular organisms → Bacteria	773	Open in IMG/M
3300012469\|Ga0150984_122127487	All Organisms → cellular organisms → Bacteria	1092	Open in IMG/M
3300012891\|Ga0157305_10073074	All Organisms → cellular organisms → Bacteria	790	Open in IMG/M
3300012902\|Ga0157291_10101270	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → environmental samples → uncultured Phycisphaerae bacterium	784	Open in IMG/M
3300012951\|Ga0164300_10351068	Not Available	792	Open in IMG/M
3300012955\|Ga0164298_10381718	All Organisms → cellular organisms → Bacteria	904	Open in IMG/M
3300012971\|Ga0126369_10930683	Not Available	955	Open in IMG/M
3300012977\|Ga0134087_10687071	Not Available	541	Open in IMG/M
3300012984\|Ga0164309_11494405	Not Available	578	Open in IMG/M
3300014166\|Ga0134079_10590667	All Organisms → cellular organisms → Bacteria	550	Open in IMG/M
3300014318\|Ga0075351_1105175	All Organisms → cellular organisms → Bacteria	615	Open in IMG/M
3300014324\|Ga0075352_1272266	Not Available	529	Open in IMG/M
3300015371\|Ga0132258_10362006	All Organisms → cellular organisms → Bacteria	3591	Open in IMG/M
3300015371\|Ga0132258_11434663	Not Available	1744	Open in IMG/M
3300015371\|Ga0132258_11940698	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → environmental samples → uncultured Solirubrobacteraceae bacterium	1482	Open in IMG/M
3300015374\|Ga0132255_101258960	Not Available	1115	Open in IMG/M
3300015374\|Ga0132255_102408319	All Organisms → cellular organisms → Bacteria	804	Open in IMG/M
3300015374\|Ga0132255_104677269	Not Available	580	Open in IMG/M
3300015374\|Ga0132255_106139870	Not Available	508	Open in IMG/M
3300017965\|Ga0190266_10456020	All Organisms → cellular organisms → Bacteria	730	Open in IMG/M
3300018051\|Ga0184620_10296698	All Organisms → cellular organisms → Bacteria	545	Open in IMG/M
3300018060\|Ga0187765_11010166	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → environmental samples → uncultured Solirubrobacteraceae bacterium	571	Open in IMG/M
3300018072\|Ga0184635_10189840	Not Available	820	Open in IMG/M
3300018073\|Ga0184624_10083756	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → environmental samples → uncultured Phycisphaerae bacterium	1345	Open in IMG/M
3300018073\|Ga0184624_10201564	All Organisms → cellular organisms → Bacteria	888	Open in IMG/M
3300018083\|Ga0184628_10049521	All Organisms → cellular organisms → Bacteria	2120	Open in IMG/M
3300018433\|Ga0066667_10480672	All Organisms → cellular organisms → Bacteria	1020	Open in IMG/M
3300018469\|Ga0190270_11016875	Not Available	856	Open in IMG/M
3300018469\|Ga0190270_11178293	All Organisms → cellular organisms → Bacteria	803	Open in IMG/M
3300018476\|Ga0190274_13223462	All Organisms → cellular organisms → Bacteria	549	Open in IMG/M
3300018481\|Ga0190271_10146405	All Organisms → cellular organisms → Bacteria	2272	Open in IMG/M
3300018481\|Ga0190271_10378939	Not Available	1503	Open in IMG/M
3300019361\|Ga0173482_10098572	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → environmental samples → uncultured Solirubrobacteraceae bacterium	1056	Open in IMG/M
3300019361\|Ga0173482_10444607	Not Available	615	Open in IMG/M
3300021082\|Ga0210380_10068755	Not Available	1544	Open in IMG/M
3300021384\|Ga0213876_10159411	Not Available	1200	Open in IMG/M
3300022756\|Ga0222622_10273206	All Organisms → cellular organisms → Bacteria	1153	Open in IMG/M
3300022756\|Ga0222622_10758683	Not Available	707	Open in IMG/M
3300024055\|Ga0247794_10022329	Not Available	1581	Open in IMG/M
3300024055\|Ga0247794_10266938	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → environmental samples → uncultured Frankineae bacterium	569	Open in IMG/M
3300024187\|Ga0247672_1003802	Not Available	2439	Open in IMG/M
3300024254\|Ga0247661_1056713	All Organisms → cellular organisms → Bacteria	721	Open in IMG/M
3300025271\|Ga0207666_1010995	All Organisms → cellular organisms → Bacteria	1247	Open in IMG/M
3300025315\|Ga0207697_10399173	All Organisms → cellular organisms → Bacteria	611	Open in IMG/M
3300025899\|Ga0207642_10052511	All Organisms → cellular organisms → Bacteria	1850	Open in IMG/M
3300025903\|Ga0207680_10257763	All Organisms → cellular organisms → Bacteria	1206	Open in IMG/M
3300025904\|Ga0207647_10327686	All Organisms → cellular organisms → Bacteria	869	Open in IMG/M
3300025907\|Ga0207645_10386135	All Organisms → cellular organisms → Bacteria	940	Open in IMG/M
3300025925\|Ga0207650_10076242	All Organisms → cellular organisms → Bacteria → Proteobacteria	2533	Open in IMG/M
3300025925\|Ga0207650_10192118	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium ADurb.Bin122	1631	Open in IMG/M
3300025926\|Ga0207659_10115006	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → environmental samples → uncultured Phycisphaerae bacterium	2051	Open in IMG/M
3300025926\|Ga0207659_10190101	All Organisms → cellular organisms → Bacteria	1633	Open in IMG/M
3300025926\|Ga0207659_10949852	All Organisms → cellular organisms → Bacteria	739	Open in IMG/M
3300025930\|Ga0207701_10352633	All Organisms → cellular organisms → Bacteria	1272	Open in IMG/M
3300025930\|Ga0207701_10463600	Not Available	1087	Open in IMG/M
3300025931\|Ga0207644_11379241	Not Available	592	Open in IMG/M
3300025936\|Ga0207670_10401233	All Organisms → cellular organisms → Bacteria	1096	Open in IMG/M
3300025937\|Ga0207669_10947889	All Organisms → cellular organisms → Bacteria	721	Open in IMG/M
3300025944\|Ga0207661_10003236	All Organisms → cellular organisms → Bacteria → Proteobacteria	11287	Open in IMG/M
3300025944\|Ga0207661_11238306	All Organisms → cellular organisms → Bacteria	686	Open in IMG/M
3300025954\|Ga0210135_1015471	Not Available	746	Open in IMG/M
3300026116\|Ga0207674_11769085	Not Available	585	Open in IMG/M
3300026121\|Ga0207683_10352122	All Organisms → cellular organisms → Bacteria	1351	Open in IMG/M
3300027874\|Ga0209465_10000269	All Organisms → cellular organisms → Bacteria	24364	Open in IMG/M
3300027880\|Ga0209481_10483392	All Organisms → cellular organisms → Bacteria	639	Open in IMG/M
3300028768\|Ga0307280_10000133	All Organisms → cellular organisms → Bacteria	13335	Open in IMG/M
3300030988\|Ga0308183_1046632	All Organisms → cellular organisms → Bacteria	856	Open in IMG/M
3300031226\|Ga0307497_10647121	All Organisms → cellular organisms → Bacteria	540	Open in IMG/M
3300031366\|Ga0307506_10516031	All Organisms → cellular organisms → Bacteria	509	Open in IMG/M
3300031716\|Ga0310813_10821037	All Organisms → cellular organisms → Bacteria	838	Open in IMG/M
3300032013\|Ga0310906_10334069	All Organisms → cellular organisms → Bacteria	980	Open in IMG/M
3300032180\|Ga0307471_103848277	Not Available	531	Open in IMG/M
3300033412\|Ga0310810_10694572	Not Available	948	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	64.03%
Host-Associated	Host-Associated	35.97%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	51.08%
Plants	Host-Associated → Plants	35.25%
Aquatic	Environmental → Aquatic	12.95%
Human	Host-Associated → Human	0.72%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	51.08%
Rhizosphere	Host-Associated → Plants → Rhizosphere	17.27%
Rhizoplane	Host-Associated → Plants → Rhizoplane	15.11%
Sediment	Environmental → Aquatic → Sediment	10.07%
Roots	Host-Associated → Plants → Roots	2.88%
Freshwater	Environmental → Aquatic → Freshwater	1.44%
Marine	Environmental → Aquatic → Marine	1.44%
Digestive System	Host-Associated → Human → Digestive System	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	35.97%
Soil	Host-Associated → Plants → Rhizosphere → Soil	14.39%
Loam	Environmental → Terrestrial → Soil → Loam	12.95%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	10.07%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	7.19%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	6.47%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.88%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.16%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	2.16%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.44%
Wetlands	Environmental → Aquatic → Marine → Wetlands	1.44%
Soil	Host-Associated → Plants → Rhizoplane → Soil	1.44%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	0.72%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	21.58%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	14.39%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	10.07%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	9.35%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	7.19%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	7.19%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	6.47%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.32%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.60%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.88%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.16%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.16%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	2.16%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.44%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	1.44%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	1.44%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.72%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	0.72%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.72%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	13.67%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	7.91%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	5.76%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	5.04%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	5.04%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	4.32%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.32%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.60%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.60%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	3.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.88%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.88%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.16%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.16%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	2.16%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.16%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.16%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	2.16%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	1.44%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.44%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.44%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.44%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.44%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.44%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	1.44%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	1.44%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	1.44%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	1.44%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.72%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.72%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	0.72%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.72%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.72%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.72%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.72%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	0.72%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.72%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.72%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.72%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.72%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.72%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300000953	Soil microbial communities from Great Prairies - Kansas Corn soil	Environmental	Open in IMG/M
3300002128	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5	Environmental	Open in IMG/M
3300004047	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqC_D1	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300004801	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-3 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005836	Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.42_YBB	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009157	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009609	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT890	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011432	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT718_2	Environmental	Open in IMG/M
3300011434	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT814_2	Environmental	Open in IMG/M
3300011435	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT660_2	Environmental	Open in IMG/M
3300011440	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT840_2	Environmental	Open in IMG/M
3300012159	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT500_2	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012891	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S148-409B-2	Environmental	Open in IMG/M
3300012902	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S169-409C-1	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300014318	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqA_D1_rd	Environmental	Open in IMG/M
3300014324	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleA_D1	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018051	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018083	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300021082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_coex redo	Environmental	Open in IMG/M
3300021384	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9	Host-Associated	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300024055	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S046-202B-6	Environmental	Open in IMG/M
3300024187	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK13	Environmental	Open in IMG/M
3300024254	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK02	Environmental	Open in IMG/M
3300025271	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S5 (SPAdes)	Environmental	Open in IMG/M
3300025315	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Host-Associated	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025904	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)	Host-Associated	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025954	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqC_D1 (SPAdes)	Environmental	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300030988	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_157 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031366	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 25_S	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1049054752	3300000364	Soil	MISYEELDRALARWKARTKGGTIEAPHAATDSQATPMPISADELGSIPTSVSPIPGENTGEINADELETYDEAD*
INPhiseqgaiiFebDRAFT_1053987092	3300000364	Soil	MISYEELDRALARWKARSKGGAVPDLPSLPDGDATPLPIRAEELGSIPTAVSPVPGERTGEIDANELVESYDEAD*
JGI10214J12806_118841171	3300000891	Soil	MISYEELDRALGRWKARKAGGAVDAGAPAIDSSATPLPIPAEELGSIPHEVSPIPERTGEIDANELVESYDEAE*
JGI11615J12901_103716142	3300000953	Soil	MISYEELDRALGKWKARGKGGVPDAPASTRDSQATPMPIPAEELGSIPNEVAPGSGESTGEIDANELETYDEAE*
JGI24036J26619_100113133	3300002128	Corn, Switchgrass And Miscanthus Rhizosphere	MISYEELDRALARWKARTKGGTVEAPAPYADSQATPMPIRAXELGSIPNXVSPIPGERTGEIDANELVESYDEAE*
Ga0055499_100216372	3300004047	Natural And Restored Wetlands	MISYEELDRALTRWKARTKGGTVETPLPQTDSQATPMPIRAEELGSIPNAVSPIPGERTGEIDANELVESYDEAE*
Ga0062593_1001913482	3300004114	Soil	MISYEELDRALARWKARTKGGTIDAPLPLVDSQATPMPIRAEELGSIPNAVSPIPGERTGEIDANELVESYDEAD*
Ga0062593_1017736582	3300004114	Soil	MISYEELDRALGKWKARGKGGVPDAPASMRDSQATPMPIPAEELGSIPNEVAPGNGESTGEIDANELETYDEAE*
Ga0062589_1025966872	3300004156	Soil	MISYEELDRALARWKARTKGGTVEAPAPYADSQATPMPIRAEELGSIPNEVSPIPGERTGEIDANELVESYDEAE*
Ga0063356_1004351322	3300004463	Arabidopsis Thaliana Rhizosphere	MISYEELDRALARWKARSKGGVPEAPSDDGATPLPIRAEELGSIPVATSPIPGESTGEIDANELETYEEAE*
Ga0062592_1023106801	3300004480	Soil	MISYEELDRALGRWKARKAGGAVDAGAPAIDSSATPLPIPAEELGSIPHEVSPIPERTGEIDA
Ga0066395_1000013117	3300004633	Tropical Forest Soil	MISYEELDRALARWKGRAKGGAPDAPAGPDDQATPLPIRAEELGSIPNAMSPGPGESTGEINADDLETYEEAE*
Ga0058860_113869701	3300004801	Host-Associated	MISYEELDRALGKWKARGKGGVPDAPASMRDSQATPMPIPAEELGSIPNEVAPGSGESTGEIDANELETYDEAE*
Ga0065712_105099731	3300005290	Miscanthus Rhizosphere	MISYEELDRALARWKARKGGAVDVPQATIDSAATPLPIPAEELGSIPHEVSPIPERTGEIDANELVESYDE
Ga0070676_100100154	3300005328	Miscanthus Rhizosphere	MISYEELDRALARWKARTKGGTVEAPAPYADSQATPMPIRAEELGSIPNAVSPIPGERTGEIDANELVESYDEAE*
Ga0070676_102110494	3300005328	Miscanthus Rhizosphere	YRAMISYEELDRALARWKARTKGGTIDAPLPLVDSQATPMPIRAEELGSIPNAVSPIPGERTGEIDANELVESYDEAD*
Ga0070676_115470361	3300005328	Miscanthus Rhizosphere	MISYEELDRALARWKSRAKGVVIDAPTASDATPLPIPAEELGSIPNAVSPIPGERTGEIDVNELETYDEAD*
Ga0070683_1003754161	3300005329	Corn Rhizosphere	MISYEELDRALARWKARKAGGGAVDAAAPAVDSSATPLPIPAEELGSIPHEVSPIPERTGEIDANELVESYDEAE*
Ga0070683_1003937053	3300005329	Corn Rhizosphere	MIAYEELDRALARWKARSKGGAVPESQGAPEDQATPLPIRAEELGSVPTAISPLPGESTGEINADDLESYEEAE*
Ga0070690_1010951911	3300005330	Switchgrass Rhizosphere	LARWKARTKGGTVEAPAPYADSQATPMPIRAEELGSIPNEVSPIPGERTGEIDANELVESYDEAE*
Ga0070670_1000410872	3300005331	Switchgrass Rhizosphere	MISYEELDRALGRWKARSRGGAVEAPAAAPVEISSEATPLPIPADELGSIPTAISPVTERTGEIDANELETYED*
Ga0066388_1012361191	3300005332	Tropical Forest Soil	ALPRGGSRYYRVMISYEELDRALAKWKARTKGGTIEAPHAPGDSQATPLPIRAEELGSIPSAVSPLPGESTGEINADDLETYDEAE*
Ga0070689_1005451212	3300005340	Switchgrass Rhizosphere	MISYEELDRALARWKARSKGGVPEAPADDGATPLPIRAEELGSIPVAASPIPGESTGEIDANELETYEEAE*
Ga0070675_1005024112	3300005354	Miscanthus Rhizosphere	MISYEELDRALGRWKARSRGGAVEAPAAAPVEIASEATPLPIPADELGSIPTAIAPGAERTGEIDANDLETYED*
Ga0070674_1012142012	3300005356	Miscanthus Rhizosphere	MISYEELDRALGRWKARARGGAVEAPAAAPVEIPTDATPLPIPADELGSIPNEISPGTERTGEIDANDLESYED*
Ga0070673_1017430381	3300005364	Switchgrass Rhizosphere	MISYEELDRALARWKGRAKGVVIDAPTASDATPLPIPAEELGSIPNAVSPIPGERTGEID
Ga0070688_1006589321	3300005365	Switchgrass Rhizosphere	MISYEELDRALARWKGRAKGVVVDAPTASDATPLPIPAEELGSIPNAVSPIPGERTGEIDVNELET
Ga0070667_1002828023	3300005367	Switchgrass Rhizosphere	MISYEELDRALARWKARKGGAVDVPQSAIDGAATPLPIPAEELGSIPNEVSPIPGERTGEIDANELVETYDEAE*
Ga0070678_1004408103	3300005456	Miscanthus Rhizosphere	GGAVEAPAAAPVEIASEATPLPIPADELGSIPTAIAPGAERTGEIDANDLETYED*
Ga0070681_107370701	3300005458	Corn Rhizosphere	MISYEELDRALARWKGRAKGGGVPEPQNAPDDQATPLPIRAEELGSIPNAVSPIPGDHTGEIDANDLETYDEAE*
Ga0070685_113661781	3300005466	Switchgrass Rhizosphere	MISYEELDRALGKWKARGKGGVPDAPASMRDSQATPMPIPAEELGSIPNEVAPGSGESTGEIDANELET
Ga0070684_1000042608	3300005535	Corn Rhizosphere	MISYEELDRALARWKARKGGAVDVPQATIDSAATPLPIPAEELGSIPHEVSPIPERTGEIDANELVESYDEAE*
Ga0070684_1008663162	3300005535	Corn Rhizosphere	MISYEELDRALARWKGRAKGGGVPEPQNAPDDQATPLPIRAEELGSIPNAVSPIPGDHTGEI
Ga0070684_1023104571	3300005535	Corn Rhizosphere	MISYEELDRALSRWKARSKGGVVDAPNVVPDSAATPLPIPAEELGSIPNEVSPIPGERTGEIDVNELESYDEAE*
Ga0070672_1013231572	3300005543	Miscanthus Rhizosphere	MISYEELDRALGRWKARSRGGAVEAPAAAPVEIASEATPLPIPADELGSIPTAIAPGAERTGEIDANDLE
Ga0066705_100505053	3300005569	Soil	MISYEELDRALARWKGRAKGGAPDAPSAPDVDATPLPIRAEELGSIPNAMSPGPSESTGEINADELETYDEAE*
Ga0068854_1005839761	3300005578	Corn Rhizosphere	MISYEELDRALARWKGRGKGVVVEAPMASDATPLPIPAEELGSIPNAVSPIPGERTGEIDVNELETYDEAD*
Ga0068864_1013860371	3300005618	Switchgrass Rhizosphere	MISYEELDRALGRWKGRSKGGMPEAPTGSDATPLPIPAEELGSIPHEVSPIGGEGTGEIDANELETYDEAE*
Ga0066905_1020606422	3300005713	Tropical Forest Soil	MISYEELDRALARWKARTKGGTIEAPLPGADSQATPMPIRAEELGSIPNAVSPIPGERTGEIDANELVESYDEAE*
Ga0066903_1044864562	3300005764	Tropical Forest Soil	MISYEELDRALARWKARTKGGGGVPEAAPTFDSQATPLPIRAEELGSIPTSVSPIPGDSTGEINADDLETYDEAE*
Ga0074470_105751932	3300005836	Sediment (Intertidal)	MIAYEELDRALARWKARSKGGGVPEMPPVPEGDATPLPIRAEELGSIPNAVSPIPGERTGEIDVNELVESYDEAE*
Ga0068863_1024485261	3300005841	Switchgrass Rhizosphere	ALARWKGRAKGVVVDAPTASDATPLPIPAEELGSIPNAVSPIPGERTGEIDVNELETYDEAD*
Ga0068862_1000768101	3300005844	Switchgrass Rhizosphere	ALARWKARTKGGTVEAPAPYADSQATPMPIRAEELGSIPNEVSPIPGERTGEIDANELVESYDEAE*
Ga0066652_1004014382	3300006046	Soil	MISYEELDRALARWKARGSVGAGAVEASAPSDATPLPIRAEELGSIPNTVSPIPGDGTGEIDANELETYEEAD*
Ga0097621_1002466122	3300006237	Miscanthus Rhizosphere	MIPYEELDRALARWKGRAKGGVVEAPNAALDSQATPMPIPAEELGSIPTNVSPIPERTGEISVDELETYDEAE*
Ga0097621_1006315443	3300006237	Miscanthus Rhizosphere	RPDRDTIRGMISYEELDRALSRWKARSKGGVVDAPNVVPDSAATPLPIPAEELGSIPNEVSPIPGERTGEIDVNELESYDEAE*
Ga0068871_1011922431	3300006358	Miscanthus Rhizosphere	MISYEELDRALGRWKARKAGGGAVDAGAPAIDSSATPPPIPAEELGSIPHEVSPIPERTGEIDANELVE
Ga0075434_1011526502	3300006871	Populus Rhizosphere	MISYEELDRALARWKGRAKGVVVDAPTASDATPLPIPAEELGSIPNAVSPIPGERTGEIDVNELETYDEAD*
Ga0075418_127691331	3300009100	Populus Rhizosphere	LSPGTIRLPALGDRVNIGVMISYEELDRALARWKARAKGGVPEAPAAGYDDGATPLPIRAEELGSIPTAIPGEGTGEIDANELETYDEAD*
Ga0111538_126593701	3300009156	Populus Rhizosphere	MISYEELDRALGRWKARSKAGVPEAPGAPDDQATPLPIRAEELGSIPNEVSPIPGESTGEIDANELETYEEAE*
Ga0105092_106286521	3300009157	Freshwater Sediment	MISYEELDRALARWNGRAKGIVVDAPNASDATPLPIPAEELGSIPSAVSPIPGERTGEIDVNELETYDEAD*
Ga0105347_10930212	3300009609	Soil	MISYEELDRALARWKGRGKGIVVDAPTASDATPLPIPAEELGSIPSAVSPIPGERTGEIDVNELETYDEAD*
Ga0126377_121942582	3300010362	Tropical Forest Soil	ARWKARTKGGTIEAPLPGADSQATPMPIRAEELGSIPNAVSPIPGERTGEIDANELVESYDEAE*
Ga0126379_114424222	3300010366	Tropical Forest Soil	MIAYEELDRALARWKGRAKGGAPDASSGVPDDQATPLPIRAEELGSIPNTVSPIPGDSTGEINADELETYEEAE*
Ga0134124_114914392	3300010397	Terrestrial Soil	MGLRLGDLGRPDRDTIRGMISYEELDRALSRWKARSKGGVVDAPNVVPDSAATPLPIPAEELGSIPNEVSPIPGERTGEIDVNELESYDEAE*
Ga0134124_127638281	3300010397	Terrestrial Soil	MISYEELDRALGRWKARAKGGAVEAPPPTDATPLPIPAEELGSVPVAVSPIPDGGTGEIDANELETYEEAE*
Ga0134122_112304492	3300010400	Terrestrial Soil	MIAYEELDRALARWKARSKGGGVPEMPPAPEGDATPLPIRAEELGSIPNAVSPIPGERTGEIDVNELVESYDEAE*
Ga0137428_10694242	3300011432	Soil	MISYEELDRALARWKGRARGVVVDAGSASDATPLPIRAEELGSIPNAVSPIPGERTGEIDVNELETYDEAD*
Ga0137464_10530862	3300011434	Soil	MISYEELDRALARWKGRAKGVVVDAPTASDATPLPIRAEELGSIPTSVSPIPGERTGEIDVNELETYDEAD*
Ga0137426_10378252	3300011435	Soil	MISYEELDRALARWKGRGKGVVVDVPIASDATPLPIPAEELGSIPSAVSPIPGERTGEIDVNELETYDEAD*
Ga0137433_10489443	3300011440	Soil	MISYEELDRALTRWKGRAKGIVVDAPTASDATPLPIPAEELGSIPSAVSPIPGERTGEIDVNELETYDEAD*
Ga0137344_10506711	3300012159	Soil	MISYEELDRALARWKGRGKGVVVEAPMASDATPLPIRAEELGSIPNAVSPIPGERTGEIDVNELETYDEAD*
Ga0150985_1117702082	3300012212	Avena Fatua Rhizosphere	MISYEELDRALARWKARSKGGVPEAPGAVDAELTPLPIRAEELGSIPNAVSPLPGERTGEIDANELVETYDEAD*
Ga0150985_1176644311	3300012212	Avena Fatua Rhizosphere	LDRALARWKARSKGGVPEAPAAPDGELTPLPIRAEELGSIPNAVSPVPGERTGEIDANELVETYDEAD*
Ga0137367_102867212	3300012353	Vadose Zone Soil	MISYEELDRALARWKARSKGGVPEAPGAPDGELTPLPIRAEELGSIPNAVSPVPGERTGEIDVNELVESYDEVE*
Ga0137366_102779641	3300012354	Vadose Zone Soil	MISYEELDRALARWKARSKGGVPEAPGAPDGELTPLPIRAEELGSIPNAVSPVPGERTGEIDANELVETYD
Ga0150984_1145155182	3300012469	Avena Fatua Rhizosphere	MISYEELDRALGRWKGRSKGGVPEAPNASDATPLPIPAEELGSIPHEVSPIPGERTGEIDVNELETYDEAE*
Ga0150984_1221274872	3300012469	Avena Fatua Rhizosphere	MISYEELDRALARWKARSKGGVPEAPAAPDGELTPLPIRAEELGSIPNAVSPVPGERTGEIDANELVETYDEAD*
Ga0157305_100730742	3300012891	Soil	MISYEELDRALARWKARSKGGVPEAPGAADDQATPLPIRAEELGSIPVATSPIPGESTGEIDANELETYEEAE*
Ga0157291_101012702	3300012902	Soil	MISYEELDRALGRWKARSKAGVPESPGAPDDQATPLPIRAEELGSIPHEVSPIPGESTGEIDANELETYEEAE*
Ga0164300_103510681	3300012951	Soil	EELDRALGRWKARKAGGGAVDAGAPAIDSSATPLPIPAEELGSIPHEVSPIPERTGEIDANELVESYDEAE*
Ga0164298_103817182	3300012955	Soil	MISYEELDRALGRWKARKAGGGAVDAGAPAIDSSATPLPIPAEELGSIPHEVSPIPERTGEIDANELVESYDEAE*
Ga0126369_109306831	3300012971	Tropical Forest Soil	MIPYEELDRALARWKGRAKGGTPDASSGVPDDQATPLPIRAEELGSIPNAVSPIPGDSTGEINADELETYEEAE*
Ga0134087_106870713	3300012977	Grasslands Soil	LARWKARSKGGVPEAPGAPDGELTPLPIRAEELGSIPNAVSPVPGERTGEIDANELVETYDEAD*
Ga0164309_114944051	3300012984	Soil	MIAYEELDRALARWKARSKGGGIPEMPPAPEGDATPLPIRAEELGSIPNAVSPIPGERTGEIDVNELVESYDEAE*
Ga0134079_105906671	3300014166	Grasslands Soil	MISYEELDRALARWKARGSVGAGAVEASAPSDATPLPIRAEELGSIPNTVSPIPGDGTGEIDANELETYEEA
Ga0075351_11051751	3300014318	Natural And Restored Wetlands	MISYDELDRALGKWKARAKGGVVDAPAGTVDSQATPMPIPAEELGSIPNEVSPGPERTGEIDVNELETYDEAE*
Ga0075352_12722662	3300014324	Natural And Restored Wetlands	MISYEELDRALGKWKARAKGGVVDAPAGTVDSQATPMPIPAEELGSIPNEVSPGPERTGEIDVNELETYDEAE*
Ga0132258_103620063	3300015371	Arabidopsis Rhizosphere	MISYEELDRALGKWKARGKGGVPDAPASTRDSQATPMPIPAEELGSIPNEVAPGPGESTGEIDANELETYDEAE*
Ga0132258_114346632	3300015371	Arabidopsis Rhizosphere	MISYEELDRALGRWKARSKGGVPEAPGAPDDQATPLPIRAEELGSIPHEVSPIPGESTGEIDANELETYEEAE*
Ga0132258_119406982	3300015371	Arabidopsis Rhizosphere	MISYEELDRALGRWKARAKGGAVEAPTDATPMPIPAEELGSVPVAVSPIPDGSTGEIDANELETYEEAE*
Ga0132255_1012589602	3300015374	Arabidopsis Rhizosphere	LSPGTIRLPALGDRVNIGVMISYEELDRALARWKARAKGGVPEAPAAGYDDGATPLPIRAEELGSIPTAIPGEGTGEIDANELETYEEAE*
Ga0132255_1024083192	3300015374	Arabidopsis Rhizosphere	MISYEELDRALGKWKARAKGGVPDAPASARDSQATPMPIPAEELGSIPNEVAPGTGDSTGEIDANELETYDEAE*
Ga0132255_1046772692	3300015374	Arabidopsis Rhizosphere	YEELDRALARWKARSKGGVPDAPNDEGATPLPIRAEELGSIPHEVSPIPGESTGEIDANELETYEEAE*
Ga0132255_1061398702	3300015374	Arabidopsis Rhizosphere	RWKGRSKGGAVDAPVAPVDSNATPLPIRAEELGSIPNAMSPIPGERTGEIDANELVETYDEAE*
Ga0190266_104560202	3300017965	Soil	MISYEELDRALGRWKARSRGGAVEAPAAAPVEIPTDATPLPIPADELGSIPTAISPGTERTGEIDANDLETYED
Ga0184620_102966982	3300018051	Groundwater Sediment	MISYEELDRALARWKGRAKGVVVEAPIASDATPLPIPAEELGSIPNAVSPIPGERTGEIDVNELETYDEAD
Ga0187765_110101662	3300018060	Tropical Peatland	MISYEELDRALARWKARSKGGGVPDASAPPEDQATPLPIRAEELGSIPNVVSPIPGEGTGEIDANDLESYEEAE
Ga0184635_101898402	3300018072	Groundwater Sediment	MISYEELDRALGRWKARSRGGAVEAMPAAAPVEIPTDATPLPIPADELGSIPTAISPGTERTGEIDANDLESYED
Ga0184624_100837562	3300018073	Groundwater Sediment	MISYEELDRALGRWKARSRGGAVESPAAAPVEIASEATPLPIPADELGSIPTAISPGTERTGEIDANDLETYED
Ga0184624_102015642	3300018073	Groundwater Sediment	MISYEELDRALARWKARSKGGGVPDLPSVPDGDATPLPIRAEELGSIPTAVSPVPGERTGEIDANELVESYDEAE
Ga0184628_100495212	3300018083	Groundwater Sediment	MISYEELDRALARWKGRSKGGVPDAPTGSDATPLPIPAEELGSIPNEVSPIPGERTGEIDVNELEYDEAE
Ga0066667_104806722	3300018433	Grasslands Soil	MISYEELDRALARWKARSKGGVPEAPGAPDSELTPLPIRAEELGSIPNAVSPLPGERTGEIDANELVESYDEAD
Ga0190270_110168752	3300018469	Soil	MISYEELDRALARWKGRAKGVVVDAPSASDATPLPIPAEELGSIPNAVSPIPGERTGEIDVNELETYDEAD
Ga0190270_111782932	3300018469	Soil	MISYEELDRALGRWKARSRGGAVEAPAAAPVEIPTDATPLPIPADELGSIPTAISPGTERTGEIDANDLETYEDEPSGRQK
Ga0190274_132234621	3300018476	Soil	MISYEELDRALGRWKARSRGGAVEAPAAAPVEIPTDATPLPIPADELGSIPTAISPGAERTGEIDANDLETYED
Ga0190271_101464052	3300018481	Soil	MISYEELDRALARWKGRAKGIVVDAPSASDATPLPIPAEELGSIPNAVSPIPGERTGEIDVNELETYDEAD
Ga0190271_103789392	3300018481	Soil	MISYEELDRALGRWKARSRGGAVEAPAAAPVEISTEATPLPIPADELGSIPTAISPGTERTGEIDANDLETYED
Ga0173482_100985722	3300019361	Soil	MISYEELDRALGRWKARSRGGAVEAPAAAPVEIASEATPLPIPADELGSIPTAIAPGAERTGEIDANDLETYED
Ga0173482_104446072	3300019361	Soil	MISYEELDRALARWKARKTGGGAVDASAPAIDSSATPLPIPAEELGSIPHEVSPIPERTGEIDANELVESYDEAE
Ga0210380_100687552	3300021082	Groundwater Sediment	MISYEELDRALARWKNRGKGVVVDAPRESDATPLPIRAEELGSIPNAVSPIPGEPTGEIDVNELETYDEAD
Ga0213876_101594113	3300021384	Plant Roots	GPARISPTCAAQSRYYLPMISYEELDRALARWKARSKGGIPDAAGAPEDQATPLPIRAEELGSVPNEISPMPGEGTGEIDANDLETYEEAE
Ga0222622_102732062	3300022756	Groundwater Sediment	MISYEELDRALGRWKARSRGGAVEAPAAAPVEIASEATPLPIPADELGSIPTAISPGTERTGEIDANDLETYED
Ga0222622_107586832	3300022756	Groundwater Sediment	MISYEELDRALARWKGRSKGGVPEAPTGSDATPLPIPAEELGSIPNEVSPIPGERTGEIDVNELETYDEAE
Ga0247794_100223292	3300024055	Soil	MISYEELDRALGRWKARKAGGAVDAGAPAIDSSATPLPIPAEELGSIPHEVSPIPERTGEIDANELVESYDEAE
Ga0247794_102669382	3300024055	Soil	MISYEELDRALARWKARTKGGTIDAPLPLVDSQATPMPIRAEELGSIPNAVSPIPGERTGEIDANELVESYDEA
Ga0247672_10038022	3300024187	Soil	LPAPVPSDRVNIAAMISYEELDRALARWKARKSGGAVDAPAVATDSGATPLPIRAEELGSIPTDVSPLPGERTGEIDANELVESYDEAE
Ga0247661_10567132	3300024254	Soil	MISYEELDRALARWKARKSGGAVDAPAVATDSGATPLPIRAEELGSIPTDVSPLPGERTGEIDANELVESYDEAE
Ga0207666_10109952	3300025271	Corn, Switchgrass And Miscanthus Rhizosphere	MISYEELDRALARWKARTKGGTVEAPAPYADSQATPMPIRAEELGSIPNEVSPIPGERTGEIDANELVESYDEAE
Ga0207697_103991732	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	MISYEELDRALARWKARTKGGTVEAPAPYADSQATPMPIRAEELGSIPNAVSPIPGERTGEIDANELVESYDEAE
Ga0207642_100525112	3300025899	Miscanthus Rhizosphere	MISYEELDRALARWKARTKGGTIDAPLPLVDSQATPMPIRAEELGSIPNAVSPIPGERTGEIDANELVESYDEAD
Ga0207680_102577632	3300025903	Switchgrass Rhizosphere	MISYEELDRALGKWKARGKGGVPDAPASMRDSQATPMPIPAEELGSIPNEVAPGSGESTGEIDANELETYDEAE
Ga0207647_103276862	3300025904	Corn Rhizosphere	MISYEELDRALARWKARTKGGTVEAPAPYADSQATPMPIRAEELGSIPNAVSPIPGERTGEIDANELVESYDEA
Ga0207645_103861352	3300025907	Miscanthus Rhizosphere	MISYEELDRALARWKARKGGAVDVPQSAIDGAATPLPIPAEELGSIPNEVSPIPGERTGEIDANELVESYDEAD
Ga0207650_100762423	3300025925	Switchgrass Rhizosphere	MISYEELDRALGRWKARSRGGAVEAPAAAPVEISSEATPLPIPADELGSIPTAISPVTERTGEIDANELETYED
Ga0207650_101921181	3300025925	Switchgrass Rhizosphere	MISYEELDRALGRWKGRSKGGMPEAPTGSDATPLPIPAEELGSIPHEVSPIGGEGTGEIDANELETYDEAE
Ga0207659_101150062	3300025926	Miscanthus Rhizosphere	MISYEELDRALARWKGRAKGVVVDAPTASDATPLPIPAEELGSIPNAVSPIPGERTGEIDVNELETYDEAD
Ga0207659_101901013	3300025926	Miscanthus Rhizosphere	RALARWKARTKGGTIDAPLPLVDSQATPMPIRAEELGSIPNAVSPIPGERTGEIDANELVESYDEAD
Ga0207659_109498522	3300025926	Miscanthus Rhizosphere	MISYEELDRALARWKARKGGAVDVPQSAIDGAATPLPIPAEELGSIPNEVSPIPGERTGEIDANELVETYDE
Ga0207701_103526332	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MISYEELDRALARWKARKGGAVDVPQSAIDGAATPLPIPAEELGSIPNEVSPIPGERTGEIDANELVETYDEAE
Ga0207701_104636003	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MISYEELDRALARWKARSKGGVPEAPADDGATPLPIRAEELGSIPVAASPIPGESTGEIDANELETYEEAE
Ga0207644_113792411	3300025931	Switchgrass Rhizosphere	RALARWKARSKGGVPEAPADDGATPLPIRAEELGSIPVAASPIPGESTGEIDANELETYEEAE
Ga0207670_104012333	3300025936	Switchgrass Rhizosphere	YEELDRALARWKARTKGGTVEAPAPYADSQATPMPIRAEELGSIPNEVSPIPGERTGEIDANELVESYDEAE
Ga0207669_109478892	3300025937	Miscanthus Rhizosphere	MISYEELDRALGRWKARARGGAVEAPAAAPVEIPTDATPLPIPADELGSIPNEISPGTERTGEIDANDLESYED
Ga0207661_100032365	3300025944	Corn Rhizosphere	MISYEELDRALARWKARKGGAVDVPQATIDSAATPLPIPAEELGSIPHEVSPIPERTGEIDANELVESYDEAE
Ga0207661_112383062	3300025944	Corn Rhizosphere	MISYEELDRALARWKARKAGGGAVDAAAPAVDSSATPLPIPAEELGSIPHEVSPIPERTGEIDANELVESYDEAE
Ga0210135_10154712	3300025954	Natural And Restored Wetlands	MISYEELDRALTRWKARTKGGTVETPLPQTDSQATPMPIRAEELGSIPNAVSPIPGERTGEIDANELVESYDEAE
Ga0207674_117690852	3300026116	Corn Rhizosphere	MISYEELDRALARWKARTKGGTIDAPLPLVDSQATPMPIRAEELGSIPNAVSPIPGERTGEIDANELVESYDEAE
Ga0207683_103521221	3300026121	Miscanthus Rhizosphere	RWKARSRGGAVEAPAAAPVEIASEATPLPIPADELGSIPTAIAPGAERTGEIDANDLETYED
Ga0209465_100002698	3300027874	Tropical Forest Soil	MISYEELDRALARWKGRAKGGAPDAPAGPDDQATPLPIRAEELGSIPNAMSPGPGESTGEINADDLETYEEAE
Ga0209481_104833921	3300027880	Populus Rhizosphere	MISYEELDRALARWKGRGKGVVVEAPMASDATPLPIPAEELGSIPNAVSPIPGERTGEIDVNELETYDEAD
Ga0307280_1000013310	3300028768	Soil	MISYEELDRALGRWKARSKGGGVPELPSVPDGDATPLPIRAEELGSIPTAVSPIPGERTGEIDVNELVESYDEAE
Ga0308183_10466322	3300030988	Soil	MISYEELDRALGRWKARSKGGVPDAPGASDDQATPLPIRAEELGSIPNEVSPIPGESTGEIDANELETYEEAE
Ga0307497_106471212	3300031226	Soil	MISYEELDRALARWKGRAKGVVVDAPTASDATPLPIPAEELGSIPNAVSPIPGERTGEIDVNEIESYDEAD
Ga0307506_105160311	3300031366	Soil	MIAYEELDRALARWKARSKGGGVPEAPDSEATPLPIRAEELGSIPTAVSPVPGERTGEIDANELVETYDEAE
Ga0310813_108210372	3300031716	Soil	MISYEELDRALGKWKARGKGGVVEAPAGMSDSQATPMPIPAEELGSIPHEVAPGSGERTGEIDVNELETYDEAD
Ga0310906_103340692	3300032013	Soil	YEELDRALARWKGRGKGVVVEAPMASDATPLPIPAEELGSIPNAVSPIPGERTGEIDVNELETYDEAD
Ga0307471_1038482772	3300032180	Hardwood Forest Soil	MITYEELDRALGKWKARAKGGVIDAPAGTPDSAATPLPIPAEELGSIPNEVAPGPERTGEIDVNELETYDEAE
Ga0310810_106945721	3300033412	Soil	MISYEELDRALSRWKARKAGGGAVDAAAPAVDSSATPLPIPAEELGSIPHEVSPIPERTGEIDANELVESYDEAE

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.26
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.26
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F054959

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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