Metagenome / Metatranscriptome Family F054957

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F054957
Family Type	Metagenome / Metatranscriptome
Number of Sequences	139
Average Sequence Length	73 residues
Representative Sequence	MHPELMRQVAVARMADFRRDAARYRRARAASVRPPQPVRTAIQLRLSACREELERLAALSERPLHGGDWLV
Number of Associated Samples	121
Number of Associated Scaffolds	139

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	97.84 %
% of genes near scaffold ends (potentially truncated)	99.28 %
% of genes from short scaffolds (< 2000 bps)	94.96 %
Associated GOLD sequencing projects	117
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.42

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (99.281 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (12.230 % of family members)
Environment Ontology (ENVO)	Unclassified (20.144 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (56.835 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 58.59% β-sheet: 0.00% Coil/Unstructured: 41.41%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.42
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.42
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 139 Family Scaffolds
PF07336	ABATE	54.68
PF11706	zf-CGNR	33.81
PF03641	Lysine_decarbox	6.47
PF07992	Pyr_redox_2	1.44
PF07136	DUF1385	0.72
PF08281	Sigma70_r4_2	0.72
PF04542	Sigma70_r2	0.72

COG ID	Name	Functional Category	% Frequency in 139 Family Scaffolds
COG5516	Uncharacterized conserved protein containing a Zn-ribbon-like motif, possibly RNA-binding	General function prediction only [R]	54.68
COG1611	Nucleotide monophosphate nucleosidase PpnN/YdgH, Lonely Guy (LOG) family	Nucleotide transport and metabolism [F]	6.47
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.72
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.72
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.72
COG3872	Uncharacterized conserved protein YqhQ, DUF1385 family	Function unknown [S]	0.72
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	0.72

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.28 %
Unclassified	root	N/A	0.72 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.28 %
Unclassified	root	N/A	0.72 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.28 %
Unclassified	root	N/A	0.72 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	95.68 %
Unclassified	root	N/A	0.72 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	95.68 %
Unclassified	root	N/A	0.72 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	91.37 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.72 %
Unclassified	root	N/A	0.72 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	91.37 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.72 %
Unclassified	root	N/A	0.72 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	91.37 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.72 %
Unclassified	root	N/A	0.72 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000793\|AF_2010_repII_A001DRAFT_10141496	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	500	Open in IMG/M
3300001305\|C688J14111_10076189	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1018	Open in IMG/M
3300001305\|C688J14111_10096028	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	902	Open in IMG/M
3300003994\|Ga0055435_10113472	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	727	Open in IMG/M
3300004157\|Ga0062590_100504451	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1032	Open in IMG/M
3300004479\|Ga0062595_100583135	All Organisms → cellular organisms → Bacteria	866	Open in IMG/M
3300005171\|Ga0066677_10801124	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	521	Open in IMG/M
3300005176\|Ga0066679_10449716	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	843	Open in IMG/M
3300005179\|Ga0066684_10831542	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	608	Open in IMG/M
3300005179\|Ga0066684_10900129	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	578	Open in IMG/M
3300005181\|Ga0066678_10487275	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	820	Open in IMG/M
3300005181\|Ga0066678_10702039	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	674	Open in IMG/M
3300005184\|Ga0066671_10283601	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1033	Open in IMG/M
3300005332\|Ga0066388_106800957	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	576	Open in IMG/M
3300005338\|Ga0068868_100470010	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1097	Open in IMG/M
3300005345\|Ga0070692_11083990	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	565	Open in IMG/M
3300005437\|Ga0070710_11347208	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	532	Open in IMG/M
3300005466\|Ga0070685_11422874	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	532	Open in IMG/M
3300005467\|Ga0070706_101412416	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	637	Open in IMG/M
3300005468\|Ga0070707_101495641	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	642	Open in IMG/M
3300005518\|Ga0070699_100607965	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	997	Open in IMG/M
3300005537\|Ga0070730_10189984	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1375	Open in IMG/M
3300005540\|Ga0066697_10618631	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	599	Open in IMG/M
3300005546\|Ga0070696_100297114	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1236	Open in IMG/M
3300005554\|Ga0066661_10470911	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	764	Open in IMG/M
3300005559\|Ga0066700_10030386	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3151	Open in IMG/M
3300005560\|Ga0066670_10517714	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	732	Open in IMG/M
3300005561\|Ga0066699_10860859	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	635	Open in IMG/M
3300005563\|Ga0068855_101956241	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	593	Open in IMG/M
3300005575\|Ga0066702_10329241	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	930	Open in IMG/M
3300005577\|Ga0068857_101472405	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	663	Open in IMG/M
3300005586\|Ga0066691_10106276	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1581	Open in IMG/M
3300005764\|Ga0066903_100826182	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1662	Open in IMG/M
3300006028\|Ga0070717_11810920	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	552	Open in IMG/M
3300006034\|Ga0066656_10112114	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1669	Open in IMG/M
3300006057\|Ga0075026_101083357	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	503	Open in IMG/M
3300006237\|Ga0097621_100857940	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	844	Open in IMG/M
3300006755\|Ga0079222_10737523	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	789	Open in IMG/M
3300006755\|Ga0079222_11902696	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	580	Open in IMG/M
3300006794\|Ga0066658_10256394	All Organisms → cellular organisms → Bacteria	936	Open in IMG/M
3300006806\|Ga0079220_10869420	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	694	Open in IMG/M
3300006893\|Ga0073928_10764890	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	670	Open in IMG/M
3300006914\|Ga0075436_100855573	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	679	Open in IMG/M
3300007076\|Ga0075435_100985272	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	736	Open in IMG/M
3300009093\|Ga0105240_11568784	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	689	Open in IMG/M
3300009094\|Ga0111539_10259034	All Organisms → cellular organisms → Bacteria	2025	Open in IMG/M
3300009098\|Ga0105245_10521741	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1206	Open in IMG/M
3300009137\|Ga0066709_101024162	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1210	Open in IMG/M
3300009176\|Ga0105242_11659508	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	674	Open in IMG/M
3300009176\|Ga0105242_11903990	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	635	Open in IMG/M
3300010043\|Ga0126380_11055002	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	689	Open in IMG/M
3300010046\|Ga0126384_11656080	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	604	Open in IMG/M
3300010048\|Ga0126373_11458059	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	750	Open in IMG/M
3300010048\|Ga0126373_13292093	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	503	Open in IMG/M
3300010159\|Ga0099796_10327009	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	656	Open in IMG/M
3300010359\|Ga0126376_11797848	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	650	Open in IMG/M
3300010360\|Ga0126372_12252706	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	594	Open in IMG/M
3300010375\|Ga0105239_10658587	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1196	Open in IMG/M
3300010376\|Ga0126381_100718352	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1430	Open in IMG/M
3300010376\|Ga0126381_105029399	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	507	Open in IMG/M
3300010398\|Ga0126383_11361043	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	800	Open in IMG/M
3300010398\|Ga0126383_13601252	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	506	Open in IMG/M
3300010401\|Ga0134121_12608567	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	549	Open in IMG/M
3300012199\|Ga0137383_10476881	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	914	Open in IMG/M
3300012211\|Ga0137377_10012114	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	7320	Open in IMG/M
3300012357\|Ga0137384_11094467	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	639	Open in IMG/M
3300012896\|Ga0157303_10158805	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	615	Open in IMG/M
3300012899\|Ga0157299_10051629	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	924	Open in IMG/M
3300012907\|Ga0157283_10152255	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	683	Open in IMG/M
3300012960\|Ga0164301_10026551	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2692	Open in IMG/M
3300012960\|Ga0164301_10602155	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	811	Open in IMG/M
3300012960\|Ga0164301_10625273	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	799	Open in IMG/M
3300012971\|Ga0126369_10651549	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1127	Open in IMG/M
3300012971\|Ga0126369_13546502	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	511	Open in IMG/M
3300012975\|Ga0134110_10176368	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	890	Open in IMG/M
3300012977\|Ga0134087_10175977	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	945	Open in IMG/M
3300012984\|Ga0164309_11546333	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	568	Open in IMG/M
3300012986\|Ga0164304_10109165	All Organisms → cellular organisms → Bacteria	1666	Open in IMG/M
3300012986\|Ga0164304_10660776	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	789	Open in IMG/M
3300012989\|Ga0164305_10204496	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1391	Open in IMG/M
3300013105\|Ga0157369_10994280	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	859	Open in IMG/M
3300013763\|Ga0120179_1018397	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1739	Open in IMG/M
3300013764\|Ga0120111_1113621	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	633	Open in IMG/M
3300014299\|Ga0075303_1072058	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	627	Open in IMG/M
3300014969\|Ga0157376_11800025	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	649	Open in IMG/M
3300015357\|Ga0134072_10229838	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	657	Open in IMG/M
3300015357\|Ga0134072_10291413	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	605	Open in IMG/M
3300017959\|Ga0187779_11278753	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	519	Open in IMG/M
3300017961\|Ga0187778_11124204	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	548	Open in IMG/M
3300017974\|Ga0187777_11465823	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	505	Open in IMG/M
3300018058\|Ga0187766_10536400	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	792	Open in IMG/M
3300018433\|Ga0066667_10869957	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	773	Open in IMG/M
3300018433\|Ga0066667_11281325	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	640	Open in IMG/M
3300018433\|Ga0066667_11328644	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	629	Open in IMG/M
3300019361\|Ga0173482_10381386	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	649	Open in IMG/M
3300019361\|Ga0173482_10386974	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	646	Open in IMG/M
3300020010\|Ga0193749_1089884	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	555	Open in IMG/M
3300020069\|Ga0197907_10293425	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	679	Open in IMG/M
3300020082\|Ga0206353_10468848	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	678	Open in IMG/M
3300021445\|Ga0182009_10138531	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1146	Open in IMG/M
3300021560\|Ga0126371_10716470	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1148	Open in IMG/M
3300024245\|Ga0247677_1025349	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	849	Open in IMG/M
3300024249\|Ga0247676_1023295	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	982	Open in IMG/M
3300024288\|Ga0179589_10194392	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	884	Open in IMG/M
3300024331\|Ga0247668_1103660	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	576	Open in IMG/M
3300025912\|Ga0207707_10085947	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2749	Open in IMG/M
3300025913\|Ga0207695_11031381	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	702	Open in IMG/M
3300025916\|Ga0207663_10893678	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	710	Open in IMG/M
3300025920\|Ga0207649_10941914	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	678	Open in IMG/M
3300025921\|Ga0207652_11591069	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	558	Open in IMG/M
3300025929\|Ga0207664_11430766	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	612	Open in IMG/M
3300025944\|Ga0207661_10395142	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1253	Open in IMG/M
3300025981\|Ga0207640_10828534	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	803	Open in IMG/M
3300026023\|Ga0207677_10250380	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1438	Open in IMG/M
3300026078\|Ga0207702_11175173	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	761	Open in IMG/M
3300026088\|Ga0207641_10659413	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1028	Open in IMG/M
3300026088\|Ga0207641_11600562	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	653	Open in IMG/M
3300026300\|Ga0209027_1226077	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	600	Open in IMG/M
3300026548\|Ga0209161_10405509	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	599	Open in IMG/M
3300026552\|Ga0209577_10468406	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	864	Open in IMG/M
3300027725\|Ga0209178_1112243	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	918	Open in IMG/M
3300027857\|Ga0209166_10273064	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	893	Open in IMG/M
3300027874\|Ga0209465_10293014	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	815	Open in IMG/M
3300027907\|Ga0207428_10826606	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	657	Open in IMG/M
3300028812\|Ga0247825_11403335	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	512	Open in IMG/M
3300031199\|Ga0307495_10130840	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	629	Open in IMG/M
3300031231\|Ga0170824_105364463	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	708	Open in IMG/M
3300031544\|Ga0318534_10095953	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1695	Open in IMG/M
3300031764\|Ga0318535_10533643	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	521	Open in IMG/M
3300031792\|Ga0318529_10334420	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	705	Open in IMG/M
3300031795\|Ga0318557_10030937	Not Available	2164	Open in IMG/M
3300032043\|Ga0318556_10548621	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	604	Open in IMG/M
3300032044\|Ga0318558_10111185	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1291	Open in IMG/M
3300032054\|Ga0318570_10147813	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1050	Open in IMG/M
3300032076\|Ga0306924_10250956	All Organisms → cellular organisms → Bacteria	2032	Open in IMG/M
3300032180\|Ga0307471_101856419	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	753	Open in IMG/M
3300032180\|Ga0307471_103053982	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	594	Open in IMG/M
3300032261\|Ga0306920_102309559	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	745	Open in IMG/M
3300032828\|Ga0335080_11528023	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	660	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	84.17%
Host-Associated	Host-Associated	15.83%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	82.01%
Plants	Host-Associated → Plants	15.83%
Aquatic	Environmental → Aquatic	2.16%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	82.01%
Rhizosphere	Host-Associated → Plants → Rhizosphere	9.35%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.76%
Marine	Environmental → Aquatic → Marine	0.72%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.72%
Sediment	Environmental → Aquatic → Sediment	0.72%
Roots	Host-Associated → Plants → Roots	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	64.03%
Loam	Environmental → Terrestrial → Soil → Loam	13.67%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	8.63%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.76%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.32%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.72%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.72%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.72%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.72%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	30.22%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	15.83%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	11.51%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	9.35%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	8.63%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.76%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.32%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.32%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.16%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.16%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.44%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.72%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.72%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.72%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.72%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.72%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.72%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	12.23%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	10.07%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	9.35%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	7.19%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.76%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.60%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.60%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.88%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.88%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.88%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.88%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.88%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.16%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.16%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.16%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.16%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.16%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.44%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.44%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.44%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	1.44%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.44%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.44%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.44%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.44%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.44%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.72%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.72%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.72%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.72%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.72%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.72%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.72%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.72%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.72%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.72%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.72%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.72%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000793	Forest soil microbial communities from Amazon forest - 2010 replicate II A001	Environmental	Open in IMG/M
3300001305	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300003994	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqA_D2	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012896	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S118-311C-2	Environmental	Open in IMG/M
3300012899	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S058-202B-2	Environmental	Open in IMG/M
3300012907	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S044-104R-1	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013763	Permafrost microbial communities from Nunavut, Canada - A15_65cm_0M	Environmental	Open in IMG/M
3300013764	Permafrost microbial communities from Nunavut, Canada - A28_35cm_6M	Environmental	Open in IMG/M
3300014299	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleC_D1	Environmental	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015357	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300020010	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1s2	Environmental	Open in IMG/M
3300020069	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020082	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300024245	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK18	Environmental	Open in IMG/M
3300024249	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK17	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300024331	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK09	Environmental	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026300	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300027725	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028812	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48	Environmental	Open in IMG/M
3300031199	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 7_S	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A001DRAFT_101414961	3300000793	Forest Soil	MHPELMRQVAMFRMADFHRNAARYRRVRQAMRESSVNPRQSVRTAIELRLSACREELERLAALSERQLHEGEW
C688J14111_100761891	3300001305	Soil	MMHPELMRQVAMSRMDDFNRSAVRYRRARQASIHPAQPVRTAIQLRLSACREEL
C688J14111_100960283	3300001305	Soil	MMHPELMRQVAMSRMADFNRSAVKYRRAREASVRSPQPVRTAIELRLSACREELERLAQLSERPLHD
Ga0055435_101134722	3300003994	Natural And Restored Wetlands	MHPEFMHQIARDRAADFQRAAANYRRAREASRRPPQPVRAAIELRLSACRAELERL
Ga0062590_1005044511	3300004157	Soil	MHPELMRQVAMTRVADFQRNAVRYRRVREAMRGSSVSPRQSVRSAIELRVSAC
Ga0062595_1005831352	3300004479	Soil	MHPEISHFLALDRMVGFRRDAERYRRVRAASLHPSQQVRTAIQLRLSACREELERLAALSERPLQDGDWLVADLDGVPVAAVSIED
Ga0066677_108011242	3300005171	Soil	MHPELLRQVAMARAADFQRDAARYRRGRAASARPAQPVRVAIELRLSACRDELERLAALSERTLKDGDWLVADVDGVPVAAVSVEDGTT
Ga0066679_104497162	3300005176	Soil	MMHPELTRQFALDRIAGFHRDARRYRLAREASVQPPTPVRTQIQLRLSACREELERLAQLSERPLREGDWIV
Ga0066684_108315422	3300005179	Soil	MHPELLRQVAMARMADLRRDAVRYRRAREASFHAPQPVRMAISLRLSACRDELERLAALSERPLHDGDWLVAELDGVP
Ga0066684_109001292	3300005179	Soil	MHPELMRQVAMARMAGFQRDAIRYRRAREGYSRPPQPVRTAIELRLSACRDELERLAQLSERPLHDGDWIVADVD
Ga0066678_104872751	3300005181	Soil	MHPELIRQVAMARIADLHRDGARYRRARKASFHPPQPVRTAIQLRLSACRDELERLAALSDRPLHDGDWIVAD
Ga0066678_107020392	3300005181	Soil	MMHPELMRQVALSRMADLNRNAVRYRRAREASVRSPQPVRTAIELRLSACREELERLAQLSERPLHDG
Ga0066671_102836013	3300005184	Soil	MHPELIRQVAMARMADFHRDAARYRRARAASERPPQPVRTAIQLRLSDCRDELERLAALSDRPLHDGDWIVADLD
Ga0066388_1068009572	3300005332	Tropical Forest Soil	MHPELSRQIAFARMATFQRDAARYRRAREASAHPPQPVRTAIQLRLSACREELERLGALSERPVHGGDWLVAELDGVPVAAV
Ga0068868_1004700103	3300005338	Miscanthus Rhizosphere	MHPEISRLIALDRVVGFRREAERYRRVRAASLHPSQAVRTAIQLRLSACREELERLAALSERPLQDGDWLVADLDG
Ga0070692_110839902	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	MHPELTHLIVLDKMAGFERDARRYRRARDSHAAPPRPVRTAIELRLSACREEIERLAQLSERPLHDGDWLVADVDGVPVAAVSVED
Ga0070710_113472082	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MHPELIRQVALARMATFERDAARYRRVRQASAHAPQPVRAAIQLRLSACREELERLA
Ga0070685_114228741	3300005466	Switchgrass Rhizosphere	MHPELIHQIVLERTARFQRDADRYRQAREAHIRPSQPVRTAIELRLSACREELERLAALSERPLQDGDWLVADLDGVPVAAV
Ga0070706_1014124161	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MHPEISRLIALERVVGFRREAERYRRVRAASLHPSQAVRTAIQLRLSACREELERLAALSERPLQDGDWLVADLDGVPVAAV
Ga0070707_1014956412	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MMHPELMRQVAMSRMADLNRNAVRYRRAREASVRSPQPVRTAIQLRLSACREELERLA
Ga0070699_1006079653	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MMHPELMRQVAMSRMADLNRNAVRYRRAREASVRSPQPVRTAIQLRLSACREEL
Ga0070730_101899841	3300005537	Surface Soil	MHPDLTYHFALEHTAALRQDAATYRRAKAASLHPPQHVRAAIQLRLSACRDELERLAALSERRLSGGDWIVADVNGVAVAAVSLV
Ga0066697_106186312	3300005540	Soil	MHPELIRQVAMARMADFHRDAARYRRARAASERPPQPVRTAIRLRLSDCRDELERLAALSDRPLH
Ga0070696_1002971143	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MMHPELMRQVAMSRMADLNRNAVRYRRAREASVHSPQPVRTAIQLRLSACREELERLAQL
Ga0066661_104709111	3300005554	Soil	MHPELLRQVAMARAADFQRDAARYRRGRAASARPAQPVRVAIELRLSACRDELERLA
Ga0066700_100303861	3300005559	Soil	MMHPELMRQVALSRMADLNRNAVRYRRAREASVRSPQPVRTAIELRLSACREELERLAQLSERPLHDGDWIVADVDGVAVAAVAVDDGTTVYD
Ga0066670_105177141	3300005560	Soil	MHPELMRQVAMARMADLQRDARNARRYRRARAASAHPYHPVRIAIQLRLSECLDELERLAALSERQLH
Ga0066699_108608592	3300005561	Soil	MHPELLRQVAMARAADFQRDAARYRRGRAASARPAQPVRVAIELRLSACRDELERLAALSERTLKDGDWLVADVDGVPVAAV
Ga0068855_1019562411	3300005563	Corn Rhizosphere	MMHPELMRQVAMSRMADLNRNAVRYRRAREASVPSPQPVRTAIQLRLSACREELERL
Ga0066702_103292411	3300005575	Soil	VKHPALLHQVALARMGDRHRDASRFRRARQAYTRPPQPVRTAIELRLSACREELERLA
Ga0068857_1014724052	3300005577	Corn Rhizosphere	MHPELTHLMVLDKMAGFERDARRYRRARESHAAPPRPVRTAIELRLSACREEIERLAQLSERPLHEGDWLVADVDGVPVAAVSVEDGATVYD
Ga0066691_101062761	3300005586	Soil	MHPELLRQVAMARAADFQRDAARYRRGRAASARPAQPVRVAIELRLSACREELERLAALSERTLKDGDWLVADVDGVPVAAVSVEDGTTVYDP
Ga0066903_1008261825	3300005764	Tropical Forest Soil	VIHPVLMHQMVVAKMADRNRDAVRYRQAHHDRTRRSQPVRTAIELRLSACREELERLAQLSERPLHEGDWLVADVDGVPV
Ga0070717_118109202	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MHPELMHQVALARIGDRRRDAVRYRRARQSYSRPPMPVRTAIELRISQCREELERLALLSERPLREGDFIVADVDGVAV
Ga0066656_101121145	3300006034	Soil	MHPELLRQVAMARMADLRRDAVRYRRAREASFHAPQPVRMAISLRLSACRDELERLAALSERPLHDGDWLVAELDGVPVAAVSVEN
Ga0075026_1010833572	3300006057	Watersheds	MHPDLTFQFALEHNAALRRDAARYRRARAASLQPPQPVRAAIQLRLSACRDELERLAALSDRKLRSGDWLVADVNGEAVAAVSLD
Ga0097621_1008579402	3300006237	Miscanthus Rhizosphere	MMHPELMRQVAMSRMADLNRNAARYRRAREASVHSPQPVRTAIQLRLSA
Ga0079222_107375231	3300006755	Agricultural Soil	MHPVLMHQMVVAKMADRNRDAVRYRESHQKRSRSSQPVRAAIELRLSACREELERLALLSERPLHEGDWLVADVDG
Ga0079222_119026962	3300006755	Agricultural Soil	MHPELMRQVAVARMADFRRDAARYRRARAASVRPPQPVRTAIQLRLSACREELERLAALSERPLHGGDWLVADVNGVAVAAVAVD
Ga0066658_102563943	3300006794	Soil	MHPELMRQVAMARMADLQRDARNARRYRRARAASAHPYHPVRIAIQLRLSECLDELERLAAL
Ga0079220_108694201	3300006806	Agricultural Soil	MHPVLMHQMVVAKMADRNRDAVRYRQSHQKRSRSSQPVRAAIELRLSACREELERLALLSERPLHEGDWLVADVDGVPV
Ga0073928_107648901	3300006893	Iron-Sulfur Acid Spring	MYPELTHQIVLDKMATFQRDARRYRRAREASARPPQPVRTAIQLRLSACREELERLALLSERPLPEGDWIVADVDGVPVAAV
Ga0075436_1008555731	3300006914	Populus Rhizosphere	MMHPELMRQVAMSRMADLNRNAARYRRAREASVRSPQPVRTAIQLRLSACREELERLAQLSER
Ga0075435_1009852721	3300007076	Populus Rhizosphere	MMHPELMRQVAMSRMADLNRNAARYRRAREASVRSPQPVRTAIQLRLSACREELERLAQLSERPLHEGEWIVADVDGVAV
Ga0105240_115687841	3300009093	Corn Rhizosphere	MHPELIRQVAIARIADFQRDAVRYRRARAASVHPPQPVRAAIQLRLSACRDELE
Ga0111539_102590344	3300009094	Populus Rhizosphere	MMHPELMRQVAMSRMADLNRNAARYRRAREASVRSPQPVRTAIQLRLSACREELERLAQLSERPLHEGEWI
Ga0105245_105217411	3300009098	Miscanthus Rhizosphere	MHPELTHLMVLDKMAGFERDARRYRRARESHAAPPRPVRTAIELRLSACREEIERLAQLSERPLHDGDWLVADVD
Ga0066709_1010241621	3300009137	Grasslands Soil	MHPELLRQVAMARVADLRRDAVRYRRAREASFHAPQPVRTAISLRLSACRDELERLAALSERPLHDGDWLVAELDGVPVAAVSVEDG
Ga0105242_116595081	3300009176	Miscanthus Rhizosphere	MMHPELMRQVAMSRMADLNRNAVRYRRAREASVRSPQPVRTAIQLRLSACREELERLAQLSERP
Ga0105242_119039902	3300009176	Miscanthus Rhizosphere	MHPDVMNQIAHDRAADLQRAAANYRRAREASHRPSQPVRAAIELRLSACRDELERLA
Ga0126380_110550021	3300010043	Tropical Forest Soil	MHPELSRQIAFARMATFQRDAARYRRSREASVHPPQPVRTAIQLRLSACREELERLAALSERPVHDGDWLVAELDGVPVAAVAV
Ga0126384_116560801	3300010046	Tropical Forest Soil	MHPELMRQVAMSRVAEFSNQAARYRRVRAAMREASVAPRPSVRAAIELRLSACRDELERLAALSERQLHDGEWIVADVDGVPVAAVAVDDGTT
Ga0126373_114580592	3300010048	Tropical Forest Soil	MYPELSLMMANDRIAGLKRDARRYRRTRASSEFAPQPVRTAIQLRLSACREELERLAALS
Ga0126373_132920931	3300010048	Tropical Forest Soil	MHPELTHQIVLDKMAGFQRDARRYRRAREASVRPPQPVRTAIQLRLSACREELERLALLSERDLHDGDWIVADVDEVPVAAIAIDDGTT
Ga0099796_103270091	3300010159	Vadose Zone Soil	MRQVAMARMAGFQRDAIRYRQAREGYSRPPQTVRTAIELRLSACREELERLSQLSERPLHEGDWIVADVDGVAVAAV
Ga0126376_117978482	3300010359	Tropical Forest Soil	MMHPVLMHQVAIARMADRNRDAACYRRAREGYTRPPQTVRTAIELRLSACREELERLALLSERPLHEGDWLIADVDGVPVA
Ga0126372_122527061	3300010360	Tropical Forest Soil	MHPEISRMIAFDRMADFRRSAVRYRRAREASARPPQAVRTAIQLRLSACREELERLAALSERPLHEGDWLVADLDGVPVAA
Ga0105239_106585871	3300010375	Corn Rhizosphere	MHPELTHLMVLDKMAGFERDARRYRRARESHAAPPRPVRTAIELRLSACREEIERLAQLSERPLHDGDWLVADVDGVPVA
Ga0126381_1007183521	3300010376	Tropical Forest Soil	MAMFQRDAARYRRAREAATHPPQPVRTAIQLRLSACREELERLAALSERPLHDGDWIVADVDGVPVAAM
Ga0126381_1050293992	3300010376	Tropical Forest Soil	MHPELVRQVAMARVADFHRSARRYREAREAYVRPPQAVRTAIQLRLSACREELERLA
Ga0126383_113610431	3300010398	Tropical Forest Soil	MHPVLMHQMVVAKMAERNRDAVRYRQAHHGHTRRSQPVRTAIELRLSACREELERLAQLSERPLHEGDWLVA
Ga0126383_136012522	3300010398	Tropical Forest Soil	MHPELTHQIVLDKMATFQRDARRYRRAREASSRPPQPVRTAIQLRLSACREELERLAQLSERPL
Ga0134121_126085672	3300010401	Terrestrial Soil	MHPELTHLMVLDKMAGFERDARRYRRARDSHAAPPRPVRTAIELRLSACREEIERLAQLSERPLHDGDWLVADVDGVPVAAVSVEDG
Ga0137383_104768811	3300012199	Vadose Zone Soil	MMHPELTRQFALDRIAGFHRDARRYRLARDASVQPPTPVRTQIQLRLRACREELERLAQLSERPLHEGDWLAADVDGVAVAAVSV
Ga0137377_100121149	3300012211	Vadose Zone Soil	MMHPELTRQFALDRIAGFHRDARRYRLAREASVQPPTPVRTQIQLRLSACREELERLAQLSERPLHEGDWIVAD
Ga0137384_110944671	3300012357	Vadose Zone Soil	MRQVAMARMAGFQRDAIRYRRAREGYSRPPQPVRTAIELRLSACRDELERLAQLSERPLHDGDWILSDVDGEAVAAVAVD
Ga0157303_101588051	3300012896	Soil	MMHPELMRQVVMSRMADLNRNAARYRRAREASVRSPQPVRTAIQLRLSACREELERLAQLSERPLHEGEWIVADVDGVAVA
Ga0157299_100516291	3300012899	Soil	MMHPELMRQVAMSRMADLNRNAARYRRAREASVRAPQPVRTAIELRLSACREELERLAQLSERP
Ga0157283_101522552	3300012907	Soil	MMHPELMRQVAMSHISDLNRNTVRYRLAREASNRPSQPVRTAIQLRLSACREELERLALLSERPLHD
Ga0164301_100265511	3300012960	Soil	MMQPELMRQVAMSRMADFNRNAARYRRVREASFPSPQPVRTAIQLRLSACREELERLAQLSERLLHEGEWIVADVDGVAVA
Ga0164301_106021551	3300012960	Soil	MHPELMRQFALDRAADLQRNAANYRRARGASRRQAQPVRAAIELRLSACRDELERLAALSERRLGGGDWLIADVNGVPVAA
Ga0164301_106252732	3300012960	Soil	MMHPELMRQVAMSRMADLNRSAARYRRAREASVRSPQPVRTAIQLRLS
Ga0126369_106515491	3300012971	Tropical Forest Soil	MYPDLSRYLALDRISRFQLAAARYRRARNASVYPPQPVRTAIQLRLSACREELERLAALTERTARDGDWIVAELDGVPVAAVSIDDGTTLY
Ga0126369_135465021	3300012971	Tropical Forest Soil	MMHPELMRQVAMSRMADLNESAARYRRAHQDRPRQSQVVRTAIE
Ga0134110_101763682	3300012975	Grasslands Soil	MAGFQRDAIRYRRAREGYSRPPQPVRTAIELRLSACRDELERLAQLSERPLHDGDWIVADVDGEAVAAVAVDDGTTLY
Ga0134087_101759772	3300012977	Grasslands Soil	MRQVAMARMAGFQRDAIRYRRAREGYSRPPQPVRTAIELRLSACRDELERLAQLSERPLHDGDWIVADVDGEAVAAVAVD
Ga0164309_115463332	3300012984	Soil	MHPVLMHQMVVAKMADRNRDAVRYRQSHQDRSRPSRPVRTAIELRLSACREELERLAQLSERPLHQGEWLVADVDGVPVA
Ga0164304_101091651	3300012986	Soil	MMHPELMRQVAMSRMADLNRSAARYRRAREASVRSPQPVRTAIQLRLSAC
Ga0164304_106607761	3300012986	Soil	MHPELLRQVAMARVADLRRDAVRYRRAREASFHAPQPVRTAISLRLSACRDELERLAALSERP
Ga0164305_102044964	3300012989	Soil	MMHPELMRQVAMSRMADLNRNAARYRRAREASVHSPQPVRTAIQLRLSACREELERLAQLSERPLHEGEWI
Ga0157369_109942802	3300013105	Corn Rhizosphere	MHPEISRLIALERVVGFRREAERYRRVRAASLHPSQAVRTAIQLRLSACREELERLAALSERPLQDGDWLVADLDGVPVAAVSI
Ga0120179_10183974	3300013763	Permafrost	MHPELSRQVALDRMAGFQRDAARYRRARTASLHPPQPVRTAIQLRLSACREELERLAALSERPARDGDWLVAD
Ga0120111_11136211	3300013764	Permafrost	MHPELSRQVALDRMAGFQRDAARYRRARTASLHPPQPVRTAIQLRLSACREELERLAAQSERPARDG
Ga0075303_10720581	3300014299	Natural And Restored Wetlands	MHPEFMHQIARDRAADFQRAAANYRRAREAARRPPQPVRAAIELRLSACRAELERLAA
Ga0157376_118000251	3300014969	Miscanthus Rhizosphere	MHPELTHLMVLDKMAGFERDARRYRRARESHTAPPRPVRTAIELRLSACREETERLAQLRERPRHDGDWLVADVD*
Ga0134072_102298383	3300015357	Grasslands Soil	MHPELIRQVAMARMADFQRDAARYRRARAASERPPQPVRTAIQLRLSDCRDELERLAA
Ga0134072_102914132	3300015357	Grasslands Soil	MMHPELMRQVAMSRMADFNRSAVRYRRAKQASIRPAQPVRTAIQLRLSACREEL
Ga0187779_112787531	3300017959	Tropical Peatland	MHPELTLMLARDRMAGFRSSAERYRRARQASTRPPQPVRTAIQLRLSACREELERLAALSERPLHDGDWIVADVDGVPVAA
Ga0187778_111242042	3300017961	Tropical Peatland	MFPQFAYDFAKERIAARHFEAARDRLAREASVRPPQPVRAAIQLRLSACRDELERLAALSECTLASGDWIVADVNGVPVAAVSLEDGTTVYDPFR
Ga0187777_114658232	3300017974	Tropical Peatland	MYMHPELSFQIGLDRAATLRRNAERYRRARAASIHPPQAVRTAIQLRLSACREELERLAALTSRPAR
Ga0187766_105364001	3300018058	Tropical Peatland	MHPQLTHQIALDRMASFQRDARRYRLAREASARPPQPVRTAIQLRLSACREELERLAQLSERPLHGGDWIVADLDE
Ga0066667_108699571	3300018433	Grasslands Soil	MHPELMRQVALARMADFSREAARYRRVREASARPRQPVRAAIELRLSACRDELERLAA
Ga0066667_112813252	3300018433	Grasslands Soil	MMHPELMRQVALSRMADLNRNAVRYRRAREASVRSPQPVRTAIELRLSACREELERLAQLSERPLHDGEWIVADVDGVAVAAV
Ga0066667_113286441	3300018433	Grasslands Soil	MHPLLSFYMGLEKTDGLRRDAVQYRLGREAGRRPAQAVRTAIELRLSACREELERLAALSERPLHEGDWLVADVDGVAVAAVSVDDGATV
Ga0173482_103813861	3300019361	Soil	MHPELMRQVAMTRVADFQRNAVRYRRVREAMRGSSVSPRQSVRSAIELRVSACRDELERL
Ga0173482_103869741	3300019361	Soil	MMHPELMRQVAMSRMADLNRNAARYRRAREASVRSPQPVRTAIQLRLSACREELERLAQLSERPLHEGE
Ga0193749_10898841	3300020010	Soil	MHPELSRQVALDRMAGFQRDAARYRRARAASLHPPQPVRTAIQLRLSACREELERLAALSERPARDGE
Ga0197907_102934251	3300020069	Corn, Switchgrass And Miscanthus Rhizosphere	MHPELMRQVAMARMAGFQRDAVRYRQARQGYSRPPQTVRTAIELRISACREELERLALLSERPLHEGDWLVADVDGVAVAAVSVDD
Ga0206353_104688481	3300020082	Corn, Switchgrass And Miscanthus Rhizosphere	MMHPELMRQVAMSRMADFNRDAVRYRRARQASVRSPQPVRTAIELRLSACREELERLAQL
Ga0182009_101385313	3300021445	Soil	MMHPELMRQVAMSHISDLNRNAVRYRRAREASNRPSQPVRTAIQLRLSACREEIERLAPLSERP
Ga0126371_107164703	3300021560	Tropical Forest Soil	MYPDLSRYRALDRISRFQLAAARYRRARAASAYPPQPVRAAIQLRLSACREELERLAALTERTARDGDWI
Ga0247677_10253491	3300024245	Soil	MHPELMRQVAMARMAGFQRDAVRYRQARQGYSRPPQTVRTAIELRISACREELERLALLSERPLHEG
Ga0247676_10232951	3300024249	Soil	MHPELMRQVAMARMAGFQRDAVRYRQARQGYSRPPQTVRTAIELRISACREELERLALLSERPLHEGDWLVA
Ga0179589_101943921	3300024288	Vadose Zone Soil	MYPELNHQMVLERMARFQRDADRYRQAREAHIRPPQPVRTAIELRLSACREELERLSQLSERPLHEGDWIVADVDGVAVAAVS
Ga0247668_11036601	3300024331	Soil	MHPELTHLMVLDKMAGFERDARRYRRARESHAAPPRPVRTAIELRLSACREEIERLAQLSERPLHDGDWLVADVDGVPVAAVS
Ga0207707_100859476	3300025912	Corn Rhizosphere	MHPLLLHQVAMARTADFRREAARYRRARQASFHAPQPVRTAIQLRLSACREELERLAALSERPLHDG
Ga0207695_110313812	3300025913	Corn Rhizosphere	MHPELMRQVAVARMAGFQRDAIRYRRARQGYSRPPQTVRTAIELRISACREELERLALLSERPLHEGDWLVADVDG
Ga0207663_108936782	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MMHPELMRQVAMSRMADLNRNAARYRRAREASVHSPQPVRTAIQLRLSACREELERLAQLSERPLHEGEWIVADVDGVAV
Ga0207649_109419141	3300025920	Corn Rhizosphere	MHPELTHLMVLDKMAGFERDARRYRRARDSHAAPPRPVRTAIELRLSACREEIERLAQLSERPLHDGDWLVA
Ga0207652_115910691	3300025921	Corn Rhizosphere	MMHPELMRQVAMSRMADLNRNAVRYRRAREASVRSPQPVRTAIQLRLSACREELERLAQLSERPLHEGEWIV
Ga0207664_114307662	3300025929	Agricultural Soil	MHPELTHQIVLDKMAGFQRDARRYRRAREASSRPPQPVRTAIQLRLSACRDELERLAQLSDRPLHEGDWIVADVDGTPVAAVSVDDGMTL
Ga0207661_103951423	3300025944	Corn Rhizosphere	MMHPELMRQVAMSRMADLHHNAARYRRAREAAVHSPQPVRTAIQLRLSACREELERLAQLSERPLHEGEWIVADV
Ga0207640_108285342	3300025981	Corn Rhizosphere	MHPELTHLMVLDKRAGFERAARRYRRAREANSRPPQPVRTAIQLRVSACREEIERLALLSERPLHDGDWIVADVDGIPVAAVSVEDG
Ga0207677_102503801	3300026023	Miscanthus Rhizosphere	MMHPELMRQVAMSRMADLNRNAVRYRRAREASVRSPQPVRTAIQLRLSACREELERLAQLSERPLHEGEWIVADVDGVAVAAV
Ga0207702_111751731	3300026078	Corn Rhizosphere	MHPELMRQVAMARMAGFQRDAVRYRQARQGYSRPPQTVRTAIELRISACREELERLALLSERPLHEGDWLVADVDGVAVAAV
Ga0207641_106594133	3300026088	Switchgrass Rhizosphere	MMHPELMRQVAMSRMADLNRNAVRYRRAREASVRSPQPVRTAIQLRLS
Ga0207641_116005622	3300026088	Switchgrass Rhizosphere	MHPEISRLIALERVVGFRREAERYRRVRAASLHPSQAVRTAIQLRLSACREELERLAALSERPLQDGDWLVADLDGVPV
Ga0209027_12260771	3300026300	Grasslands Soil	MHPELMRQVALARMADFSREAARYRRVREASARPRQPVRAAIELRLSAC
Ga0209161_104055092	3300026548	Soil	MHPELIRQVAMARIADLHRDGARYRRARKASFHPPQPVRTAIQLRLSACRDELERLAALSDRPLHDGDWIVADLDGVPVAAVSVDDGT
Ga0209577_104684062	3300026552	Soil	MHPELIRQVAMARMADFHRDAARYRRARAVSERPPQPVRTAIQLRLSDCRDELERLAALSDRPLHDGDWIVADLD
Ga0209178_11122432	3300027725	Agricultural Soil	MHPELMRQVAVARMADFRRDAARYRRARAASVRPPQPVRTAIQLRLSACREELERLAALSERPLHGGDWLV
Ga0209166_102730642	3300027857	Surface Soil	MHPDLTYHFALEHTAALRQDAATYRRAKAASLQPPQPVRAAIQLRLSACRDELERLAALSERRLSGGDWIVADVNGVAVAAVSLV
Ga0209465_102930141	3300027874	Tropical Forest Soil	MHPVLMHQMVVAKMADRNRDAVRYRRAHHDRARSAQVVRTAIELRLSACREELERLAQLSERPLH
Ga0207428_108266062	3300027907	Populus Rhizosphere	MMHPELMRQVAMSRMADLNRNAARYRRAREASVRSPQPVRTAIQLRLSACREELERLAQLSERPLHEGEWIVADVDGV
Ga0247825_114033352	3300028812	Soil	MMHPELMRQVAMSRMADLHHNAARYRRAREAAVHSPQPVRTAIQLRLSACREELERLAQLSERPLHEGDWIVADVDGVAVAQ
Ga0307495_101308401	3300031199	Soil	MHPELMRQVAMARMAGFQRDAIRYRQAREGYSRPPQTVRTAIELRLSACREELERL
Ga0170824_1053644632	3300031231	Forest Soil	MHPELMRQVAMARMAGFQRDAIRYRQAREGYSRPPQTVRTAIELRLSACREELERLSQLSERPLHEGDWIVADVDGVAVAAVSVEDG
Ga0318534_100959535	3300031544	Soil	MHPELTHQIVLDKMAGFQRDARRYRRAREASSRPPQPVRTAIQLRLSACREELERLALLSERPLHDGDWIVADVDGIAVAAVALDD
Ga0318535_105336432	3300031764	Soil	MHPELTRQIAFARMATFQRDAARYRRAREASTHPPQPVRTAIQLRLSACREELERLGALSERPVHD
Ga0318529_103344202	3300031792	Soil	MHPELTHQIVLDKMAGFQRDARRYRRAREASSRPPQPVRTAIQLRLSACREELERLALL
Ga0318557_100309371	3300031795	Soil	MHPELTHQIVLDKMAGFQRDARRYRRAREASSRPPQPVRTAIQLRLSACREELERLALLSERPLHDGDWIVADVDGIA
Ga0318556_105486211	3300032043	Soil	MHPELTHQIVLDKMATFQRDARRYRRAREASSRPPQPVRTAIQLRLSACREELERLALLSERPLHDGDWIVADVDGIAVAAVALDDGTTVY
Ga0318558_101111851	3300032044	Soil	MHPELTHQIVLDKMAGFQRDARRYRRAREASSRPPQPVRTAIQLRLSACREELERLALLSERPLHDGDWIVADVDGIAVAAVA
Ga0318570_101478133	3300032054	Soil	MHPELTHQIVLDKMAGFQRDARRYRRAREASSRPPQPVRTAIQLRLSACREELERLALLSERPLHDGDWIVADVDGIAVAAVALDDGTTVYD
Ga0306924_102509561	3300032076	Soil	MHPELTHQIVLDKMAGFQRDARRYRRAREASSRPPQPVRTAIQLRLSACREELERLALLSERPLHDGDWIVADVDGIAVAA
Ga0307471_1018564191	3300032180	Hardwood Forest Soil	MHPELMRQVAMSRMADRHRDAARYRRERQGYARPPQTVRTAIELRLSACRDELERLAS
Ga0307471_1030539821	3300032180	Hardwood Forest Soil	MMHPELSLQFALDRMARFESDAQRYRRARQASKHALQPVRTQIQLRLSACREELERLAQLSERPLH
Ga0306920_1023095592	3300032261	Soil	MHPELTHQMVLDRMAGFQRDARRYRRAREATVRAPQPVRTAIQLRLSACIEEIERLAQLSERPLHGGDWLVADVD
Ga0335080_115280231	3300032828	Soil	MHPELTHQIVLDKIAGFERDARRYRRAREASSRPPQPVRTAIQLRLSACRDEIERLAQLSERPL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F054957

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences