Metagenome / Metatranscriptome Family F054836

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F054836
Family Type	Metagenome / Metatranscriptome
Number of Sequences	139
Average Sequence Length	63 residues
Representative Sequence	MSTSRPLHLTDTQLASVRRAAALLRPGERSQFLQAIAYELADVDPIDDEAVKGAVEAIMDAAARR
Number of Associated Samples	105
Number of Associated Scaffolds	139

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	26.62 %
% of genes near scaffold ends (potentially truncated)	24.46 %
% of genes from short scaffolds (< 2000 bps)	95.68 %
Associated GOLD sequencing projects	95
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.76

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (52.518 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (27.338 % of family members)
Environment Ontology (ENVO)	Unclassified (33.813 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (51.799 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 46.24% β-sheet: 0.00% Coil/Unstructured: 53.76%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.76
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.76
Powered by PDBe Molstar

SCOP family	SCOP domain	Representative PDB	TM-score
a.138.1.3: Di-heme elbow motif	d1h21a_	1h21	0.69961
a.22.1.4: Bacterial histone-fold protein	d1wwia1	1wwi	0.68502
c.37.1.0: automated matches	d4r7ya2	4r7y	0.6792
a.24.13.1: Domain of the SRP/SRP receptor G-proteins	d1ls1a1	1ls1	0.67305
a.24.13.1: Domain of the SRP/SRP receptor G-proteins	d1j8mf1	1j8m	0.66798

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 139 Family Scaffolds
PF05532	CsbD	7.19
PF00216	Bac_DNA_binding	1.44
PF05598	DUF772	1.44
PF01553	Acyltransferase	0.72
PF13340	DUF4096	0.72
PF02535	Zip	0.72
PF02371	Transposase_20	0.72
PF04191	PEMT	0.72
PF03734	YkuD	0.72
PF13358	DDE_3	0.72
PF00005	ABC_tran	0.72
PF01220	DHquinase_II	0.72
PF02738	MoCoBD_1	0.72

COG ID	Name	Functional Category	% Frequency in 139 Family Scaffolds
COG3237	Uncharacterized conserved protein YjbJ, UPF0337 family	Function unknown [S]	7.19
COG0776	Bacterial nucleoid DNA-binding protein IHF-alpha	Replication, recombination and repair [L]	1.44
COG0428	Zinc transporter ZupT	Inorganic ion transport and metabolism [P]	0.72
COG0757	3-dehydroquinate dehydratase	Amino acid transport and metabolism [E]	0.72
COG1376	Lipoprotein-anchoring transpeptidase ErfK/SrfK	Cell wall/membrane/envelope biogenesis [M]	0.72
COG3034	Murein L,D-transpeptidase YafK	Cell wall/membrane/envelope biogenesis [M]	0.72
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.72

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	52.52 %
Unclassified	root	N/A	47.48 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	52.52 %
Unclassified	root	N/A	47.48 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	52.52 %
Unclassified	root	N/A	47.48 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.48 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	17.99 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.48 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	12.95 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.44 %
Vicinamibacteria	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.48 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	10.07 %
Pseudomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales	1.44 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	1.44 %
Vicinamibacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.48 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3.60 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.44 %
Pseudomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae	1.44 %
Vicinamibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae	0.72 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.48 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.16 %
Pseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	1.44 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.44 %
Luteitalea	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea	0.72 %
unclassified Hyphomicrobiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.48 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	2.16 %
Pseudomonas fluorescens group	species group	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas fluorescens group	1.44 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.44 %
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	0.72 %
Luteitalea pratensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.48 %
Bradyrhizobium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	2.16 %
Pseudomonas fluorescens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas fluorescens group → Pseudomonas fluorescens	1.44 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.44 %
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	0.72 %
Luteitalea pratensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	0.72 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004267\|Ga0066396_10032068	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	770	Open in IMG/M
3300005162\|Ga0066814_10019143	All Organisms → cellular organisms → Bacteria	935	Open in IMG/M
3300005293\|Ga0065715_11065767	All Organisms → cellular organisms → Bacteria	528	Open in IMG/M
3300005328\|Ga0070676_10135942	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1560	Open in IMG/M
3300005329\|Ga0070683_100774674	All Organisms → cellular organisms → Bacteria	919	Open in IMG/M
3300005332\|Ga0066388_104771818	Not Available	690	Open in IMG/M
3300005332\|Ga0066388_104988956	All Organisms → cellular organisms → Bacteria	674	Open in IMG/M
3300005332\|Ga0066388_107781824	Not Available	537	Open in IMG/M
3300005337\|Ga0070682_100732511	All Organisms → cellular organisms → Bacteria	796	Open in IMG/M
3300005341\|Ga0070691_10169997	All Organisms → cellular organisms → Bacteria	1129	Open in IMG/M
3300005343\|Ga0070687_100414457	All Organisms → cellular organisms → Bacteria	887	Open in IMG/M
3300005354\|Ga0070675_101408831	Not Available	642	Open in IMG/M
3300005363\|Ga0008090_10165685	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3435	Open in IMG/M
3300005455\|Ga0070663_101907270	All Organisms → cellular organisms → Bacteria	534	Open in IMG/M
3300005466\|Ga0070685_11602451	Not Available	504	Open in IMG/M
3300005468\|Ga0070707_101612381	Not Available	616	Open in IMG/M
3300005526\|Ga0073909_10368078	Not Available	670	Open in IMG/M
3300005535\|Ga0070684_101907726	Not Available	561	Open in IMG/M
3300005539\|Ga0068853_100734937	All Organisms → cellular organisms → Bacteria	943	Open in IMG/M
3300005544\|Ga0070686_101219084	Not Available	626	Open in IMG/M
3300005564\|Ga0070664_101968262	All Organisms → cellular organisms → Bacteria	555	Open in IMG/M
3300005578\|Ga0068854_101177347	Not Available	686	Open in IMG/M
3300005713\|Ga0066905_100255462	All Organisms → cellular organisms → Bacteria → Proteobacteria	1349	Open in IMG/M
3300005713\|Ga0066905_101012115	All Organisms → cellular organisms → Bacteria	733	Open in IMG/M
3300005718\|Ga0068866_11077289	Not Available	575	Open in IMG/M
3300005764\|Ga0066903_100264882	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	2672	Open in IMG/M
3300005764\|Ga0066903_100350419	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2386	Open in IMG/M
3300005764\|Ga0066903_101486098	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1278	Open in IMG/M
3300005764\|Ga0066903_102018283	All Organisms → cellular organisms → Bacteria	1108	Open in IMG/M
3300005764\|Ga0066903_102260796	All Organisms → cellular organisms → Bacteria	1050	Open in IMG/M
3300005764\|Ga0066903_102355195	All Organisms → cellular organisms → Bacteria	1029	Open in IMG/M
3300005764\|Ga0066903_104731945	Not Available	724	Open in IMG/M
3300005764\|Ga0066903_105930835	Not Available	641	Open in IMG/M
3300005764\|Ga0066903_106250074	Not Available	622	Open in IMG/M
3300005764\|Ga0066903_106815765	Not Available	593	Open in IMG/M
3300005764\|Ga0066903_107118729	Not Available	579	Open in IMG/M
3300005764\|Ga0066903_108152422	Not Available	536	Open in IMG/M
3300005764\|Ga0066903_108909968	Not Available	509	Open in IMG/M
3300005844\|Ga0068862_101239290	All Organisms → cellular organisms → Bacteria	745	Open in IMG/M
3300006578\|Ga0074059_12109578	Not Available	805	Open in IMG/M
3300006580\|Ga0074049_13205577	All Organisms → cellular organisms → Bacteria	533	Open in IMG/M
3300006606\|Ga0074062_12799084	All Organisms → cellular organisms → Bacteria	959	Open in IMG/M
3300009011\|Ga0105251_10601744	Not Available	522	Open in IMG/M
3300009094\|Ga0111539_11425821	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	803	Open in IMG/M
3300009094\|Ga0111539_11960321	All Organisms → cellular organisms → Bacteria	679	Open in IMG/M
3300009094\|Ga0111539_12291095	Not Available	627	Open in IMG/M
3300009098\|Ga0105245_12294338	Not Available	593	Open in IMG/M
3300009101\|Ga0105247_11814262	Not Available	508	Open in IMG/M
3300009148\|Ga0105243_10773346	All Organisms → cellular organisms → Bacteria	944	Open in IMG/M
3300009156\|Ga0111538_10623101	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1368	Open in IMG/M
3300009162\|Ga0075423_12227007	Not Available	596	Open in IMG/M
3300009176\|Ga0105242_10125149	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	2211	Open in IMG/M
3300009177\|Ga0105248_13076366	Not Available	531	Open in IMG/M
3300009553\|Ga0105249_10575566	Not Available	1179	Open in IMG/M
3300009553\|Ga0105249_11010950	All Organisms → cellular organisms → Bacteria	900	Open in IMG/M
3300009678\|Ga0105252_10581247	Not Available	517	Open in IMG/M
3300010359\|Ga0126376_10194137	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1675	Open in IMG/M
3300010359\|Ga0126376_10244363	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	1522	Open in IMG/M
3300010375\|Ga0105239_12552459	All Organisms → cellular organisms → Bacteria	596	Open in IMG/M
3300010376\|Ga0126381_100350117	All Organisms → cellular organisms → Bacteria	2042	Open in IMG/M
3300010398\|Ga0126383_10857651	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	993	Open in IMG/M
3300010399\|Ga0134127_12108181	Not Available	642	Open in IMG/M
3300010400\|Ga0134122_10976875	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	827	Open in IMG/M
3300010401\|Ga0134121_11372250	Not Available	716	Open in IMG/M
3300011423\|Ga0137436_1118541	All Organisms → cellular organisms → Bacteria	703	Open in IMG/M
3300012882\|Ga0157304_1035024	Not Available	711	Open in IMG/M
3300012892\|Ga0157294_10015728	All Organisms → cellular organisms → Bacteria	1403	Open in IMG/M
3300012897\|Ga0157285_10209901	Not Available	617	Open in IMG/M
3300012900\|Ga0157292_10150578	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas fluorescens group → Pseudomonas fluorescens	741	Open in IMG/M
3300012901\|Ga0157288_10110004	Not Available	763	Open in IMG/M
3300012902\|Ga0157291_10242183	All Organisms → cellular organisms → Bacteria	595	Open in IMG/M
3300012906\|Ga0157295_10167652	All Organisms → cellular organisms → Bacteria	673	Open in IMG/M
3300012907\|Ga0157283_10395467	All Organisms → cellular organisms → Bacteria	512	Open in IMG/M
3300012910\|Ga0157308_10213689	Not Available	659	Open in IMG/M
3300012911\|Ga0157301_10395423	Not Available	534	Open in IMG/M
3300012912\|Ga0157306_10194570	All Organisms → cellular organisms → Bacteria	677	Open in IMG/M
3300012913\|Ga0157298_10002116	All Organisms → cellular organisms → Bacteria → Proteobacteria	2624	Open in IMG/M
3300012951\|Ga0164300_10370796	Not Available	776	Open in IMG/M
3300012960\|Ga0164301_10272956	All Organisms → cellular organisms → Bacteria	1123	Open in IMG/M
3300012961\|Ga0164302_10135190	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1427	Open in IMG/M
3300012961\|Ga0164302_11041046	Not Available	641	Open in IMG/M
3300012987\|Ga0164307_11716095	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	532	Open in IMG/M
3300013306\|Ga0163162_10632255	Not Available	1195	Open in IMG/M
3300014325\|Ga0163163_11048203	All Organisms → cellular organisms → Bacteria	879	Open in IMG/M
3300014968\|Ga0157379_12412570	Not Available	525	Open in IMG/M
3300015200\|Ga0173480_10165612	Not Available	1142	Open in IMG/M
3300015200\|Ga0173480_10766627	Not Available	612	Open in IMG/M
3300015371\|Ga0132258_12002263	All Organisms → cellular organisms → Bacteria	1457	Open in IMG/M
3300015372\|Ga0132256_103450301	Not Available	531	Open in IMG/M
3300015373\|Ga0132257_102527697	Not Available	667	Open in IMG/M
3300015374\|Ga0132255_103784717	Not Available	643	Open in IMG/M
3300015374\|Ga0132255_105356024	Not Available	543	Open in IMG/M
3300017792\|Ga0163161_10867697	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	763	Open in IMG/M
3300017792\|Ga0163161_11829723	Not Available	540	Open in IMG/M
3300018073\|Ga0184624_10526156	Not Available	512	Open in IMG/M
3300018432\|Ga0190275_12088897	Not Available	645	Open in IMG/M
3300018432\|Ga0190275_13472531	Not Available	510	Open in IMG/M
3300018469\|Ga0190270_11116848	All Organisms → cellular organisms → Bacteria	822	Open in IMG/M
3300018469\|Ga0190270_11364431	All Organisms → cellular organisms → Bacteria	754	Open in IMG/M
3300018469\|Ga0190270_13111939	Not Available	525	Open in IMG/M
3300018476\|Ga0190274_11983344	Not Available	678	Open in IMG/M
3300018476\|Ga0190274_12628475	Not Available	600	Open in IMG/M
3300018476\|Ga0190274_13939763	Not Available	503	Open in IMG/M
3300018481\|Ga0190271_10384368	Not Available	1494	Open in IMG/M
3300018481\|Ga0190271_10404907	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1460	Open in IMG/M
3300018481\|Ga0190271_11426041	Not Available	811	Open in IMG/M
3300018481\|Ga0190271_11700877	Not Available	744	Open in IMG/M
3300018481\|Ga0190271_12917872	All Organisms → cellular organisms → Bacteria	574	Open in IMG/M
3300019356\|Ga0173481_10130149	All Organisms → cellular organisms → Bacteria	1011	Open in IMG/M
3300019361\|Ga0173482_10245074	All Organisms → cellular organisms → Bacteria	760	Open in IMG/M
3300019361\|Ga0173482_10568798	Not Available	563	Open in IMG/M
3300019362\|Ga0173479_10209851	All Organisms → cellular organisms → Bacteria	828	Open in IMG/M
3300021560\|Ga0126371_13283467	All Organisms → cellular organisms → Bacteria	547	Open in IMG/M
3300025899\|Ga0207642_10466608	Not Available	767	Open in IMG/M
3300025900\|Ga0207710_10486157	Not Available	640	Open in IMG/M
3300025907\|Ga0207645_10162978	All Organisms → cellular organisms → Bacteria → Proteobacteria	1459	Open in IMG/M
3300025907\|Ga0207645_10246888	Not Available	1180	Open in IMG/M
3300025920\|Ga0207649_10449960	All Organisms → cellular organisms → Bacteria	972	Open in IMG/M
3300025924\|Ga0207694_10681802	Not Available	866	Open in IMG/M
3300025925\|Ga0207650_10816697	All Organisms → cellular organisms → Bacteria → Proteobacteria	790	Open in IMG/M
3300025932\|Ga0207690_11585212	All Organisms → cellular organisms → Bacteria	547	Open in IMG/M
3300025936\|Ga0207670_11915098	Not Available	504	Open in IMG/M
3300025945\|Ga0207679_11707744	All Organisms → cellular organisms → Bacteria	576	Open in IMG/M
3300025981\|Ga0207640_11952473	Not Available	531	Open in IMG/M
3300025986\|Ga0207658_12201844	Not Available	500	Open in IMG/M
3300026067\|Ga0207678_10299944	All Organisms → cellular organisms → Bacteria → Proteobacteria	1381	Open in IMG/M
3300026088\|Ga0207641_11091103	All Organisms → cellular organisms → Bacteria	797	Open in IMG/M
3300026095\|Ga0207676_11692497	Not Available	631	Open in IMG/M
3300026116\|Ga0207674_10718139	All Organisms → cellular organisms → Bacteria	965	Open in IMG/M
3300026118\|Ga0207675_101119857	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas fluorescens group → Pseudomonas fluorescens	807	Open in IMG/M
3300028380\|Ga0268265_11427452	Not Available	695	Open in IMG/M
3300031199\|Ga0307495_10018841	Not Available	1138	Open in IMG/M
3300031226\|Ga0307497_10534400	Not Available	584	Open in IMG/M
3300031724\|Ga0318500_10645263	All Organisms → cellular organisms → Bacteria	538	Open in IMG/M
3300031890\|Ga0306925_10797333	All Organisms → cellular organisms → Bacteria	980	Open in IMG/M
3300031954\|Ga0306926_11820568	All Organisms → cellular organisms → Bacteria	690	Open in IMG/M
3300032003\|Ga0310897_10030650	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1812	Open in IMG/M
3300032059\|Ga0318533_10625412	All Organisms → cellular organisms → Bacteria	790	Open in IMG/M
3300032076\|Ga0306924_11675718	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	667	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	64.03%
Host-Associated	Host-Associated	35.97%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	61.87%
Plants	Host-Associated → Plants	35.97%
Aquatic	Environmental → Aquatic	2.16%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	61.87%
Rhizosphere	Host-Associated → Plants → Rhizosphere	21.58%
Rhizoplane	Host-Associated → Plants → Rhizoplane	13.67%
Sediment	Environmental → Aquatic → Sediment	2.16%
Roots	Host-Associated → Plants → Roots	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	41.73%
Loam	Environmental → Terrestrial → Soil → Loam	20.14%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	12.23%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	10.07%
Soil	Host-Associated → Plants → Rhizosphere → Soil	9.35%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.60%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.16%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	36.69%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	13.67%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	12.23%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	10.07%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	9.35%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.47%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.60%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.60%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.16%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.72%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.72%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.72%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	27.34%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	13.67%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	4.32%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	4.32%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.60%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.60%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.88%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.88%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.88%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.88%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.88%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.16%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.16%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.16%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.16%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.16%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	1.44%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.44%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.44%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.44%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.44%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.44%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.72%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.72%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.72%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.72%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.72%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004267	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 6 MoBio	Environmental	Open in IMG/M
3300005162	Soil and rhizosphere microbial communities from Laval, Canada - mgLAB	Environmental	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006578	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006580	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006606	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009011	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009678	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT100	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011423	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT119_2	Environmental	Open in IMG/M
3300012882	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2	Environmental	Open in IMG/M
3300012892	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1	Environmental	Open in IMG/M
3300012897	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S074-202C-1	Environmental	Open in IMG/M
3300012900	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S179-409R-1	Environmental	Open in IMG/M
3300012901	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S119-311C-1	Environmental	Open in IMG/M
3300012902	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S169-409C-1	Environmental	Open in IMG/M
3300012906	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S212-509R-1	Environmental	Open in IMG/M
3300012907	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S044-104R-1	Environmental	Open in IMG/M
3300012910	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S198-509B-2	Environmental	Open in IMG/M
3300012911	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S088-202R-2	Environmental	Open in IMG/M
3300012912	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S163-409C-2	Environmental	Open in IMG/M
3300012913	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S043-104R-2	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300031199	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 7_S	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032003	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066396_100320682	3300004267	Tropical Forest Soil	MTTSSRPLRLSDSQLALVRRAAASLPPNLRGKFLQSIAHELAEVDPIDDEAVRRAVDAIMDAAARR*
Ga0066814_100191432	3300005162	Soil	MSTSRPLHLTDTQLASVRRAGALLRPGERSQFLQAIAYELADVDPIDDEAVKGAVEAIMDAAARR*
Ga0065715_110657672	3300005293	Miscanthus Rhizosphere	MSTSRPLHLTDTQLASVRRAAALLRPGERSQFLQAIAHELADIDPIDDEAVKGAVEAIMDAAARR*
Ga0070676_101359422	3300005328	Miscanthus Rhizosphere	MSTSRPLHLTDTQLASVRRAAALLRPGERSQFLQAIAYELADIDPIDDEAVKGAVEAIMDAAARR*
Ga0070683_1007746742	3300005329	Corn Rhizosphere	MSTSRPLHLTDTQLASVRRAAALLRPGERSQFLQAIAYELADIDPIDDEAVKGA
Ga0066388_1047718182	3300005332	Tropical Forest Soil	MSTPLCLSDRQLALVRRAAARLQPNARSQFLQSIAQELADVDPIDDEAVQRAVEAIMEAAPRRFDIRR*
Ga0066388_1049889561	3300005332	Tropical Forest Soil	MESSSSVSRPLRLSDSQLALVRRVAALLQPNARSQFLQSIAHELADVDPIDDEAVQRAVDAIMDAAARR*
Ga0066388_1077818242	3300005332	Tropical Forest Soil	MTPLRLTHQQLAAVRRAAAGLQPNARSQFLQSVASELADVYPIDDEAVQGAVEAIMDAAARK*
Ga0070682_1007325111	3300005337	Corn Rhizosphere	MSTSRPLHLTDTQLASVRRAAALLRPGERSQFLQAIASELADVDPIDDEAVKEAVEAIM
Ga0070691_101699972	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	MSTSRPLHLTDTQLASVRRAAALLRPGERSQFLQAIAYELADVDPIDDEAVKGAVEAIMDATARR*
Ga0070687_1004144572	3300005343	Switchgrass Rhizosphere	MSTSRPLHLTDTQLASVRRAAALLRPGERSQFLQAIAYELADIDPIDDEAVKGAVE
Ga0070675_1014088312	3300005354	Miscanthus Rhizosphere	MSTSRPLHLTDTQLASVRRAAALLRPGERSQFLQAIAYELADVDPIDDEAVKEAVEAIMDVAARR*
Ga0008090_101656853	3300005363	Tropical Rainforest Soil	MIAPRPLRLSDSQLALVRRAAALLTPNLRGKFLQSIAHELADADLIDDEAVQRAVDAIIDAAARR*
Ga0070663_1019072702	3300005455	Corn Rhizosphere	MSTSRPLHLTDTQLASVRRAAALLRPGERSQFLQAIAYELADIDPIDDEAVKEAVEAILDAAARR*
Ga0070685_116024511	3300005466	Switchgrass Rhizosphere	MSTSRPLHLTDTQLASVRRAAALLRPGERSQFLQAIAYELADVDPIDDEAVKGAVEAIMDAAA
Ga0070707_1016123811	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MSTSRPLHLTDTQLASVRRAAALLRPGERSQFLQAIAYELADVDPIDDEAVKGVVEAIMGAAARR*
Ga0073909_103680782	3300005526	Surface Soil	MSTSRPLHLTDTQLASVRRAAALLRPGERSQFLQAIAYELADVDPVDDEAVKEAVEAIMDAAARR*
Ga0070684_1019077262	3300005535	Corn Rhizosphere	MSTSRPLHLTDTQLASVRRAAALLRPGERSQFLQAIPYELADVDPIDDEAVKEAVEAIMDAAARR*
Ga0068853_1007349372	3300005539	Corn Rhizosphere	MSTSRPLHLTDTQLASVRRAAALLRPGERSQFLQAIAYELADVDPIDDEAVKGAVEAIMAARR*
Ga0070686_1012190842	3300005544	Switchgrass Rhizosphere	MSTSRPLHLTDTQLASVRRAAALLRPGERSQFFQAIAYELGDVDPIDDDEAVKGAVEAIMDAAARR*
Ga0070664_1019682621	3300005564	Corn Rhizosphere	MSTSRPFHLTEAQLASVRRAAALLRPGERSQFLQAIAYELADVDPIDDEAVKGAVEAIMDAAARR*
Ga0068854_1011773472	3300005578	Corn Rhizosphere	MSTSRPLHLTDTQLASVRRAAALLRPGERSQFLRAIAYELADIDPIDDEAVKAAVEAIMDATARR*
Ga0066905_1002554621	3300005713	Tropical Forest Soil	MSKPVTIAGNAASPLRLNDSQLALVRRAAALLSPNLRGKFLQSIARELADVDPIDDEAVQRAVEAIMDAAARRLDIRR*
Ga0066905_1010121153	3300005713	Tropical Forest Soil	AQLQLVRRTAALLAPKRRGKFLQSIARKLADVDPIDDEAVQRAVDAIVNAAAARW*
Ga0068866_110772892	3300005718	Miscanthus Rhizosphere	MSTSRPLHLTDTQLASVRRAAALLRPGERSQFLQAIAYELADVDPIDDEAVKGAVEAIMDAAARR*
Ga0066903_1002648823	3300005764	Tropical Forest Soil	MSTPLCLSDRQLALVRRAAARLQPNARSQFLQSIAQELADVDPIDDEAVQRAVEAIMDAAPRR*
Ga0066903_1003504193	3300005764	Tropical Forest Soil	MPEPRPLRLSDAQLQLVRRTAALLAPKRRGKFLQSIARKLADVDPIDDEAVQRAVDAIVNAAAARW*
Ga0066903_1014860983	3300005764	Tropical Forest Soil	ITPRPLRLSDSQLALVRRAAALLTPNLRGKFLRSIAHELADVDPIDDEAVQRAVDAIIDAAARR*
Ga0066903_1020182832	3300005764	Tropical Forest Soil	MESSSNVSRPLRLSDSQLALVRRAAALLQRQARSQFLQSIAHELANVDPLTDDAVQWAVDAIMDAAARR*
Ga0066903_1022607961	3300005764	Tropical Forest Soil	MAEPRPLRLSDEQLQLVRRAAALLAPNLRSKFLQSIARELADVDPIDDEAVQRAVEAIIDAGARR*
Ga0066903_1023551952	3300005764	Tropical Forest Soil	ITPRPLRLSDSQLALVRRAAALLTPNLRGKFLRSIAHELADVDPIDDEAVQGAVDAIIDAAAR*
Ga0066903_1047319451	3300005764	Tropical Forest Soil	VEAHSRKLMTISSRPLRLSDSQLALVRRTAASLAPNLRGRFLQSIAHELADVDPIDDEAVQRAVEAIMDAAARR*
Ga0066903_1059308351	3300005764	Tropical Forest Soil	MSAPPLRLTDSQLTLVRRAAALLAPNLRGKFLQSIAQELADVHPIDDETVQRAVDAIMDVAARR*
Ga0066903_1062500743	3300005764	Tropical Forest Soil	FVSLGRILRAALRTESNSSVSRPLRLSDRQLALVRRAAASLVPNLRGRFLQSIAHELADVDPLTDDAVQRAVDAIMDAAARR*
Ga0066903_1068157651	3300005764	Tropical Forest Soil	PLRLTDSQLTLVRRAAALLAPNQRNNFLQSIAHELADVGPIDDETVQQAVDAIMDAAAQR
Ga0066903_1071187292	3300005764	Tropical Forest Soil	RPLRLSDSQLALVRRVAALLQPNARSQFLQSIAHELADVDAIDDEAVQRAVDAIIDAAARR*
Ga0066903_1081524222	3300005764	Tropical Forest Soil	RPLRLSDSQLALVRRVAALLQPNARSQFLQSIAHELADVDPIDDEAVQRAVDAIMDAAARR*
Ga0066903_1089099681	3300005764	Tropical Forest Soil	MKSSSSVSRPLRLSDSQLALVRRAAALLQPNARSPFLHSIAYELADVDAIDDEAVQRAVDAIIDAAARR*
Ga0068862_1012392901	3300005844	Switchgrass Rhizosphere	MSTSRPLHLTDTQLASVRRAAALLRPGERSQFLQAIAYELADVDPIDDEAVKEAVEAIMDAAARR*
Ga0074059_121095782	3300006578	Soil	MSTSRPLHLTDTQLASVRRAAALLRPGERSQFLQAIASELADVDPIDDEAVKGAVEAILWMP*
Ga0074049_132055772	3300006580	Soil	MSTSRPLHLTDTQLASVRRAAALLRPGERSQFLQAIASELADVDPIDDEAVKGAVEAIMD
Ga0074062_127990841	3300006606	Soil	MSTSRPLHLTDTQLASVRRAAALLRPGERSQFLHAIAHELADIDPIDDEAVKEAVEAIMDAAARR*
Ga0105251_106017441	3300009011	Switchgrass Rhizosphere	LHLTDTQLASVRRAAALLRPGERSQFLQAIASELADVDPIDDEAVKGAVEAILWMP*
Ga0111539_114258212	3300009094	Populus Rhizosphere	MTPLRLTDQQLAAVRHARSQFLQSIARELANVDPIDDEAVQCAVDVSKCLEA*
Ga0111539_119603211	3300009094	Populus Rhizosphere	MSTSRPLHLTDTQLASVRRAAALLRPGERSQFLRAIAYELADVDPIDDEAVKGAVEAIMDAAARR*
Ga0111539_122910951	3300009094	Populus Rhizosphere	MSTSRPLHLTDTQLVLVRRAAALLRPGERSQFLQAIASELADVDPIDDEAVKEAVEAIMDAAARR*
Ga0105245_122943381	3300009098	Miscanthus Rhizosphere	STLHLTDTQLAAVRRAAALLRPGERSRFLQAIAYELADVDSIDDEAVKAAVEAIIDATARR*
Ga0105247_118142621	3300009101	Switchgrass Rhizosphere	MSTSRPLHLTDTQLASVRRAAALLRPGERSQFLQAIAYELADIDPIDDEAVKGAVEAIM
Ga0105243_107733461	3300009148	Miscanthus Rhizosphere	LHLTDTQLASVRRAAALLRPGERSQFLRAIAYELADVDPIDDEAVKGAVEAIMDAAARR*
Ga0111538_106231011	3300009156	Populus Rhizosphere	QLASVRRAAALLRPGERSQFLQAIAYELADIDPIDDEAVKGAVEAIMDAAARR*
Ga0075423_122270072	3300009162	Populus Rhizosphere	LHLTDTQLASVRRAAALLRPGERSQFLQAIASELADVDPIDDEAVKGVVEAIMGAAARR*
Ga0105242_101251493	3300009176	Miscanthus Rhizosphere	LTDTQLASVRRAAALLRPGERSQFLQAIAYELADIEPIDDEAVKEAVEAIMDAAARR*
Ga0105248_130763661	3300009177	Switchgrass Rhizosphere	TDTQLASVRRAAALLRPGERSQFLQAIAYELADIDPIDDEAVKEAVEAIMDAAARR*
Ga0105249_105755662	3300009553	Switchgrass Rhizosphere	LHLTDTQLASVRRAAALLRPGERSQFLQAIAHELADIDPIDDEAVKAAVEAIMDATARR*
Ga0105249_110109501	3300009553	Switchgrass Rhizosphere	MSMSRPLHLTDTQLASVRRAAALLRPGERWQFLQAIAYELADIDPIDDEAVKGAVEAIMDATARR*
Ga0105252_105812471	3300009678	Soil	LHLTDTQLASVRRAAALLRPGERSQFLQAIAYELADVDPIDDEAVKGAVEAIMDAAARR*
Ga0126376_101941373	3300010359	Tropical Forest Soil	MTTSSRPLRLSDSQLALVRRAAASLPPNLRGKFLQSIAHELAEVDPIDDEAVRRAVDSPSSRHWV*
Ga0126376_102443631	3300010359	Tropical Forest Soil	MESSSSASRPLRLSDTQLALVRRAAALLQPQARSQFLQSIAHELADVDAIDDEAVQWAVDAIMDAAARR*
Ga0105239_125524591	3300010375	Corn Rhizosphere	MSTSRPLHLTDTQLASVRRAAALLRPGERSQFLRAIAYELADIDPIDDEAVKGAVEAIMDATARR*
Ga0126381_1003501173	3300010376	Tropical Forest Soil	MITPRPLRLSDSQLALVRRAAALLTPNLRGKFLQSIAHELADADLIDDEAVQRAVDAIIDAAARR*
Ga0126383_108576512	3300010398	Tropical Forest Soil	MPEPRPLRLSDAQLQLVRRTAALLAPKQRGKFLQSIARELADVDPIDDEAVQRAVDAIVNAAAARW*
Ga0134127_121081811	3300010399	Terrestrial Soil	MSTSRPLHLTDTQLASIRRAAALLRPGERSQFLQAIAHELADVDPIDDEAVKGAVKAIMDAAARR*
Ga0134122_109768752	3300010400	Terrestrial Soil	LHLTDTQLASVRRAAALLRPGERSQFLQAIAYELADIDPIDDEAVKEAVEAIMDAAARR*
Ga0134121_113722501	3300010401	Terrestrial Soil	LHLTDTQLASVRRAAALLRPGERSQFLQAIAYELADVDPIDDEAVKEAVEAIMDAAARR*
Ga0137436_11185412	3300011423	Soil	MSTSRSLHLTDTQLASVRRAAALLRPGERSQFLQAIAYELADVDPIDDEAVKGAVEAIMDAAARR*
Ga0157304_10350241	3300012882	Soil	MSTSRPLHLTDAQLASVRRAAALLRPGERSQFLQAIAHELADIDPIDDEAVKGAVEAIMDAAARR*
Ga0157294_100157282	3300012892	Soil	LHLTDTQLASVRRAAALLRPGERSQFLQAIPYELADVDPIDDEAVKEAVEAIMDAAARR*
Ga0157285_102099012	3300012897	Soil	MSTSRPLHLTDTQLASVRRAAALLRPGERSQFLQAIAYELADVYPIDDEAVKGAVEAIMDAAARR*
Ga0157292_101505781	3300012900	Soil	MSTSRPLHLTDTQLASVRRAAALLRPGERSQFFQAIAYELGDVDPIDDDEAVK
Ga0157288_101100041	3300012901	Soil	MSTSRPLHLTDTQLASVRRAAALLRPGERSQFLKAIAYELADVDPIDDEAVKGVVEAIMGAAARR*
Ga0157291_102421832	3300012902	Soil	LHLTDTQLASVRRAAALLRPGERSQFLQAIAYELADVDPIDDEAVKGAVEAIMDSTARR*
Ga0157295_101676522	3300012906	Soil	LHLTDTQLASVRRAAALLRPGERSQFLQAIAHELADIDPIDDEAVKGAVEAIMDAAARR*
Ga0157283_103954672	3300012907	Soil	MSTSRPLHLTDTQLASVRRAAALLRPSERSQFLQAIAYELAEIDPIDDEAVKEAVEA
Ga0157308_102136892	3300012910	Soil	MSASRPLHLTDTQLASVRRAAALLRPGERSQFLQAIAYELADVDPINDEAVKGAVEAIMDAAARR*
Ga0157301_103954232	3300012911	Soil	MSTSRPLHLTDTQLASVRRAAALLRPVERSQFLQAIAYELADIDPIDDEAVKGAVEALMDAAARR*
Ga0157306_101945702	3300012912	Soil	MSTSRPLHLTDTQLASVRRAAALLRPGERSQFLQAIAYELADIDPIDDEAVKGAVEAIMDTAARR*
Ga0157298_100021162	3300012913	Soil	MSTSRPLHLTDTQLASVRRAAALLRPGERSQFLQAIPYELADVDPIDDEAVKEAVEAIMDAAARK*
Ga0164300_103707962	3300012951	Soil	MSTSRPLHLTDTQLASVRRAAALLRPGERSQFLQAIASELADVDPIDDEAVKGAVEAIMDAAARR*
Ga0164301_102729562	3300012960	Soil	LHLTDTQLASVRRAAALLRPGEHSLFLQAIAYELADIDLIDDEAVKGAVEAIMDT
Ga0164302_101351903	3300012961	Soil	LVLVRRAAALMRPVERSQFLQAIAYELADIDPIDDEAVKGAVEAIMDAAARCARRPGSVR
Ga0164302_110410462	3300012961	Soil	LASVRRAAATGRALAILAAIAYELADVDPIDDEAVKEAVEAILDAAARR*
Ga0164307_117160952	3300012987	Soil	LTDTQLALVRRAAALMRPGERSQFLQAIARELADIDPIDDDAVKEAVEAIMDAAARR*
Ga0163162_106322552	3300013306	Switchgrass Rhizosphere	MSTSRPLHLTETQLASVRRAAALLRPGERSQFLQAIAYELADVDPIDDEAVKGAVEAIMDAAARR*
Ga0163163_110482032	3300014325	Switchgrass Rhizosphere	LHLTDTQLASVRRAAALLRPGERSQFLRAIAYDLADVDPIDDDAVKGAVEAIMDAAARR*
Ga0157379_124125701	3300014968	Switchgrass Rhizosphere	MSTFRPLHLTDTQLASVRRAAALLRPGERSQFLRAIAHELADIDPIDDEAVKGAVEAIMDAAARR*
Ga0173480_101656121	3300015200	Soil	LFTDDHLTDTQLASLRRAAALLRPGERSQFLQAIAHELADVDPIDDEAVKEAVEAIMDAAARR*
Ga0173480_107666272	3300015200	Soil	LHLTDTQLASVRRAAALLRPGERSQFLQAIAYELADVDPIDDEAVKGAVEALVDAATRR*
Ga0132258_120022632	3300015371	Arabidopsis Rhizosphere	LHLTDTQLPSVRRAAALLRPGERSQFLQAIPYELADVDPIDDDAVKGAVEAIMDAAARR*
Ga0132256_1034503012	3300015372	Arabidopsis Rhizosphere	MRTSRPLHLTDTQLASVRRAAALLRPGERSQFLQAIAYELADVDPIDDEAVKGAVEAILWMP*
Ga0132257_1025276972	3300015373	Arabidopsis Rhizosphere	MSTSRPLHLTDTQLASVRRAAALLRPGERSRFLQAIAYELADIDPIDDEAVKGAVEAIMDAAARR*
Ga0132255_1037847171	3300015374	Arabidopsis Rhizosphere	MSMSRPLHLTDTQLASVRRAAALLRPGERSQFLQAIAYELADVDPIDDEAVKEAVEAIMDAAARR*
Ga0132255_1053560241	3300015374	Arabidopsis Rhizosphere	MSTSRPFHLTEAQLASVRRAAALLRPGERSQFLQAIAYELADVDPIDDEAVKGAVEAIMDAAAR
Ga0163161_108676971	3300017792	Switchgrass Rhizosphere	MSTSRPLHLTDTQLASVRRAVALLRPGERSQFLQAIAYELADVDPIDDDAVKGAVEAIMDAAARR
Ga0163161_118297232	3300017792	Switchgrass Rhizosphere	MSTSRPLHLTDTQLASVRRAAALLRPGERSQFLQAIAYELADVDPIDDEAVKEAVEAIMDAAA
Ga0184624_105261561	3300018073	Groundwater Sediment	MSTSRPLHLTDTQLASVRRAAALLRPGERSQFLQAIASELADVDPIDDEAVKEAVEAIMDATARR
Ga0190275_120888971	3300018432	Soil	MSTSRPLHLTDTQLASVRRAAALLRPGERSQFLQAIAYELADIDPIDDEVVKEAVEVIMDAAARR
Ga0190275_134725312	3300018432	Soil	MSTSRPLHLTDTQLASVRRAAALLRPGERSHFLQAIAHELADIDPIDDEAVKEAVEAIMDAAERR
Ga0190270_111168482	3300018469	Soil	MSTSRPLHLTDTQLASVRRAAALLRPGERSQFLQAIAYELADVDPIDDEAVKGAVEAIMDAAARR
Ga0190270_113644313	3300018469	Soil	MSTSRPLHLTDTQLASVRRAAALLRPGERSHFLQAIAYELADVDPTDDEAVKGAVEAILDPAARR
Ga0190270_131119392	3300018469	Soil	MGTSRPLHLTDTQLASVRRAAALLQPGERSQFLQAIARELADIDPIDDEAVKEAVEAIVDAAARR
Ga0190274_119833441	3300018476	Soil	QLASVRRAAAPLRPGERSQFLQAIAYELADIDPIDDEAVKEAVEAIMDAAARR
Ga0190274_126284752	3300018476	Soil	MGTSRPLHLTDTQLASVRRAAALLRPDERSQFLQAIAYELADIDPIDDEAVNEAVEAIMDAAARR
Ga0190274_139397632	3300018476	Soil	LHLTDTQLASVRRAAALLRPGERSQFLQAIAHELADIDPIDDEAVKGAVEAILDAAARR
Ga0190271_103843681	3300018481	Soil	RPLHLTDTQLASVRRAAALLRPGERSQFLQAIAYELADTDPIDDDAVKEAVEAIVDAAAR
Ga0190271_104049072	3300018481	Soil	MGTSRPLHLTDTQLASVRRAAALLRPGERSQFLHAIAYELADIDPIDDDAVKGAVEAIMEAAARR
Ga0190271_114260411	3300018481	Soil	LHLTDTQLASVRRAAALMRPGERPQFLQAIARELADIDPIDDAAVKEAVEAILDATARR
Ga0190271_117008771	3300018481	Soil	MSTSRPLHLTDTQLASVRRAAALLRPGERPQFLQAIAYELADIDPIDDEAVKEAVEAIMDAAARR
Ga0190271_129178721	3300018481	Soil	MSTSRPLHLTDTQLALVRRAAALLRPGERAQFLQAIAYELADIDPVDDEAVKGAVEAIMDAAARR
Ga0173481_101301492	3300019356	Soil	LHLTDTQLASVRRAAALLRPGERSQFLQAIAYELADIDPIDDEAVKGAVEAIMDATARR
Ga0173482_102450741	3300019361	Soil	MSTSRPLHLTDAQLASVRRAAALLRPGERSQFLQAIAYELADVDPIDDEAVKGAVEAIMDAAARR
Ga0173482_105687981	3300019361	Soil	TQLASVRRAAALLRLGERSQFLQAIAHELADIDPIDDDAVKEALEAIMDVAARR
Ga0173479_102098512	3300019362	Soil	MSTSRPLHLTDTQLASVRRAAALLRPGERSQFFQAIAYELGDVDPIDDDEAVKGAVEAIMDAAARR
Ga0126371_132834672	3300021560	Tropical Forest Soil	MITPRPLRLSDSQLALVRRAAALLTPNLRGKFLRSIAHELADVDPIDDEAVQGAVDAIIDAAA
Ga0207642_104666081	3300025899	Miscanthus Rhizosphere	LHLTDTQLASVRRAAALLRPGERSQFLQAIAYELADVDPIDDEAVKGAVEAIMDAAARR
Ga0207710_104861572	3300025900	Switchgrass Rhizosphere	PLHLTDTQLASVRRAAALLRPGERSQFLQAIAYELADIDPIDDEAVKGAVEAIMDAAARR
Ga0207645_101629782	3300025907	Miscanthus Rhizosphere	MSTSRPLHLTDTQLASVRRAAALLRPGERSQFLQAIAYELADVDPIDDEAVKEAVEAIMDVAARR
Ga0207645_102468882	3300025907	Miscanthus Rhizosphere	MSTSRPLHLTDTQLASVRRAAALLRPGERSQFLQAIPYELADVDPIDDEAVKEAVEAIMDAAARR
Ga0207649_104499602	3300025920	Corn Rhizosphere	MSTSRPLHLTDTQLASVRRAAALLRPGERSQFLQAIAHELADIDPIDDEAVKGAVEAIMDAAARR
Ga0207694_106818022	3300025924	Corn Rhizosphere	MSTSRPLHLTDTQLASVRRAAALLRPGERSQFLQAIAYELADVDPIDDEAVKEAVEAIMDAAARR
Ga0207650_108166972	3300025925	Switchgrass Rhizosphere	MSTSRPLHLTDTQLASVRRAAALLRPGERSQFLQAIAYELADIDPIDDEAVKGAVEAIMDAAARR
Ga0207690_115852121	3300025932	Corn Rhizosphere	MSTSRPLHLTDTQLASVRRAAALLRPGERSQFLQAIAYELADVDPIDDGAVKEAVEAIMDAAERR
Ga0207670_119150982	3300025936	Switchgrass Rhizosphere	MSTSRPLHLTDTQLALVRRTAALLRPGERSQFLHAIASELADVDPIDDEAVKEAVEA
Ga0207679_117077441	3300025945	Corn Rhizosphere	LASVRRAAALLRPGERSQFLQAIAYELADVDPIDDEAVKGAVEAIMDAAARR
Ga0207640_119524732	3300025981	Corn Rhizosphere	MSTSRPLHLTDTQLASVRRAAALLRPGERSQFLRAIAYELADIDPIDDEAVKAAVEAIMDATARR
Ga0207658_122018441	3300025986	Switchgrass Rhizosphere	TEAQLASVRRAAALLRPGERSQFLQAIAYELADVDPIDDEAVKGAVEAIMDAAARR
Ga0207678_102999442	3300026067	Corn Rhizosphere	MSTSRPLHLTDTQLASVRRAAALLRPGERSQFLQAIASELADVDPIDDEAVKEAVEAIMDAAARR
Ga0207641_110911032	3300026088	Switchgrass Rhizosphere	MSTSRPLHLTDTQLASVRRAAALLRPGERSQFSQAIAYELADVDPIDDEAVKGAVEAIMDAAARR
Ga0207676_116924971	3300026095	Switchgrass Rhizosphere	MSTSRPLHLTDTQLASVRRAAALLRPGERSQFLQAIAYELADVDPIDDEAVKGAVEAIMDTAARR
Ga0207674_107181392	3300026116	Corn Rhizosphere	MSTSRPLHLTDTQLASVRRAAALLRPGERSQFLRAIAYELADIDPIDDEAVKGAVEAIMDAAARR
Ga0207675_1011198571	3300026118	Switchgrass Rhizosphere	MSTSRPLHLTDTQLASVRRAAALLRPGERSQFLQAIAHELADVDPIDDEAVKEAVEAIMDAAARR
Ga0268265_114274521	3300028380	Switchgrass Rhizosphere	MSTSRPLHLTDTQLASVRRAAALLRPGERSQFLQAIAYELADVDPIDDEAVKAAVEAIMDAAARR
Ga0307495_100188412	3300031199	Soil	MSTSRPLHLTDTQLASVRRAAALLRPGERSQFLHAIAHELADIDPIDDEAVKEAVEATMDAAARR
Ga0307497_105344002	3300031226	Soil	MSTSRPLHLTETQLASVRRAAALLRPGERSQFLQAIAYELADVDPIDDEAVKGAVEAIMDAAARR
Ga0318500_106452632	3300031724	Soil	MPEPRPLRLSDAQLQLVRRAAALLAPKQRGKFLQLIARELADVDPIDDEAVQRAVDATVNAAAARW
Ga0306925_107973332	3300031890	Soil	MIAPRPLRLSDSQLALVRRAAALLTPNLRGKFLQSIAHELADADLIDDEAVQRAVDAIIDAAARR
Ga0306926_118205683	3300031954	Soil	MIAPRPLRLSDSQLALVRRAAALLTPNLRGKFLQSIAHELADADLIDDEAVQRAVDAIID
Ga0310897_100306503	3300032003	Soil	MSTSRPLHLTDTQLASVRRAAALLRPGERSQFLQAIASELADIDPIDDEAVKGAVEAIMDAAARR
Ga0318533_106254122	3300032059	Soil	ALEAYSGEFMIAPRPLRLSDSQLALVRRAAALLTPNLRGKFLQSIAHELADADLIDDEAVQRAVDAIIDAAARR
Ga0306924_116757182	3300032076	Soil	RLSDAQLQLVRRAAALLAPKQRGKFLQLIARELADVDPIDDEAVQRAVDATVNAAAARW

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F054836

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences