Metagenome / Metatranscriptome Family F054826

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F054826
Family Type	Metagenome / Metatranscriptome
Number of Sequences	139
Average Sequence Length	96 residues
Representative Sequence	MTSTWTNGLAEGSAPPNWVRDADGRHYCLVCRRERAIDDALEEAGEVGIEARAKLRSKAVVRFEIARDPERTEGEIAKAARTSIGAVRNARKELAS
Number of Associated Samples	114
Number of Associated Scaffolds	139

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	2.90 %
% of genes near scaffold ends (potentially truncated)	35.25 %
% of genes from short scaffolds (< 2000 bps)	82.73 %
Associated GOLD sequencing projects	109
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.72

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (92.806 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (30.216 % of family members)
Environment Ontology (ENVO)	Unclassified (28.777 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (53.957 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 44.35% β-sheet: 4.03% Coil/Unstructured: 51.61%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.72
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.72
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SCOP family	SCOP domain	Representative PDB	TM-score
d.92.1.5: Neurolysin-like	d1i1ip_	1i1i	0.63404
d.92.1.13: Zn aminopeptidase catalytic domain	d1z1wa2	1z1w	0.60457
a.128.1.1: Isoprenyl diphosphate synthases	d1rtra_	1rtr	0.5911
f.20.1.1: Clc chloride channel	d4enea_	4ene	0.59068
a.128.1.0: automated matches	d3lsna1	3lsn	0.58878

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 139 Family Scaffolds
PF04545	Sigma70_r4	42.45
PF00437	T2SSE	10.07
PF00990	GGDEF	2.88
PF01638	HxlR	2.16
PF03320	FBPase_glpX	1.44
PF08445	FR47	1.44
PF02374	ArsA_ATPase	1.44
PF00436	SSB	0.72
PF07995	GSDH	0.72
PF03976	PPK2	0.72
PF07690	MFS_1	0.72
PF02190	LON_substr_bdg	0.72
PF00884	Sulfatase	0.72
PF07676	PD40	0.72

COG ID	Name	Functional Category	% Frequency in 139 Family Scaffolds
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	2.16
COG1494	Fructose-1,6-bisphosphatase/sedoheptulose 1,7-bisphosphatase or related protein	Carbohydrate transport and metabolism [G]	1.44
COG0629	Single-stranded DNA-binding protein	Replication, recombination and repair [L]	0.72
COG2133	Glucose/arabinose dehydrogenase, beta-propeller fold	Carbohydrate transport and metabolism [G]	0.72
COG2326	Polyphosphate kinase 2, PPK2 family	Energy production and conversion [C]	0.72
COG2965	Primosomal replication protein N	Replication, recombination and repair [L]	0.72

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	93.53 %
Unclassified	root	N/A	6.47 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	92.81 %
Unclassified	root	N/A	6.47 %
Viruses	superkingdom	All Organisms → Viruses	0.72 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	92.81 %
Unclassified	root	N/A	6.47 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.72 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	91.37 %
Unclassified	root	N/A	6.47 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.72 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	91.37 %
Unclassified	root	N/A	6.47 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.72 %

Name	Rank	Taxonomy	Distribution
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	18.71 %
Unclassified	root	N/A	6.47 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5.76 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.72 %

Name	Rank	Taxonomy	Distribution
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	12.95 %
Unclassified	root	N/A	6.47 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	5.76 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	6.47 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	5.76 %
unclassified Solirubrobacterales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales	2.16 %
Solirubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae	2.16 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	6.47 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	5.76 %
Solirubrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	2.16 %
Solirubrobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	2.16 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	6.47 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	5.76 %
Solirubrobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	2.16 %
Solirubrobacter soli	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	0.72 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.72 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000956\|JGI10216J12902_101684656	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	733	Open in IMG/M
3300000956\|JGI10216J12902_102925684	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	683	Open in IMG/M
3300001205\|C688J13580_1022364	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	770	Open in IMG/M
3300001536\|A1565W1_11738055	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	524	Open in IMG/M
3300002568\|C688J35102_119435515	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	694	Open in IMG/M
3300002568\|C688J35102_120635732	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1274	Open in IMG/M
3300003373\|JGI25407J50210_10023626	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1596	Open in IMG/M
3300004156\|Ga0062589_100220015	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	1392	Open in IMG/M
3300004156\|Ga0062589_100869078	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	826	Open in IMG/M
3300004463\|Ga0063356_101211694	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1097	Open in IMG/M
3300004463\|Ga0063356_102507326	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	790	Open in IMG/M
3300004463\|Ga0063356_103056387	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	721	Open in IMG/M
3300004480\|Ga0062592_100078378	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1946	Open in IMG/M
3300005093\|Ga0062594_101567884	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	680	Open in IMG/M
3300005172\|Ga0066683_10485901	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	755	Open in IMG/M
3300005338\|Ga0068868_101796470	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	579	Open in IMG/M
3300005366\|Ga0070659_100723172	Not Available	862	Open in IMG/M
3300005456\|Ga0070678_101176796	Not Available	710	Open in IMG/M
3300005467\|Ga0070706_100779883	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	885	Open in IMG/M
3300005529\|Ga0070741_10012972	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	14869	Open in IMG/M
3300005529\|Ga0070741_10522912	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1070	Open in IMG/M
3300005884\|Ga0075291_1028170	Not Available	699	Open in IMG/M
3300005888\|Ga0075289_1084078	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	529	Open in IMG/M
3300006046\|Ga0066652_101668599	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	582	Open in IMG/M
3300006635\|Ga0075526_1003741	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1062	Open in IMG/M
3300006794\|Ga0066658_10276706	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	899	Open in IMG/M
3300006847\|Ga0075431_101918042	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	548	Open in IMG/M
3300006852\|Ga0075433_10032221	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	4489	Open in IMG/M
3300006871\|Ga0075434_100053207	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	4023	Open in IMG/M
3300006871\|Ga0075434_101023540	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	840	Open in IMG/M
3300006880\|Ga0075429_100806041	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	822	Open in IMG/M
3300006904\|Ga0075424_100087978	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	3266	Open in IMG/M
3300006904\|Ga0075424_100837565	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	981	Open in IMG/M
3300006969\|Ga0075419_10870404	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	649	Open in IMG/M
3300007076\|Ga0075435_100485354	Not Available	1067	Open in IMG/M
3300009012\|Ga0066710_100034601	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	5968	Open in IMG/M
3300009012\|Ga0066710_101247479	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1152	Open in IMG/M
3300009137\|Ga0066709_100945068	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1259	Open in IMG/M
3300009156\|Ga0111538_11850075	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	760	Open in IMG/M
3300009840\|Ga0126313_10066860	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2575	Open in IMG/M
3300009840\|Ga0126313_10507665	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	966	Open in IMG/M
3300010037\|Ga0126304_10241861	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1186	Open in IMG/M
3300010038\|Ga0126315_10157521	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1348	Open in IMG/M
3300010040\|Ga0126308_10682176	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	705	Open in IMG/M
3300010041\|Ga0126312_10000056	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	43531	Open in IMG/M
3300010042\|Ga0126314_10905023	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	652	Open in IMG/M
3300010085\|Ga0127445_1051226	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	614	Open in IMG/M
3300010119\|Ga0127452_1152964	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	512	Open in IMG/M
3300010133\|Ga0127459_1152247	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1024	Open in IMG/M
3300010329\|Ga0134111_10436363	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	566	Open in IMG/M
3300010333\|Ga0134080_10262162	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	765	Open in IMG/M
3300010400\|Ga0134122_10000052	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	55084	Open in IMG/M
3300012198\|Ga0137364_10581795	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	843	Open in IMG/M
3300012204\|Ga0137374_10003325	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	19004	Open in IMG/M
3300012204\|Ga0137374_10013781	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	9383	Open in IMG/M
3300012204\|Ga0137374_10264841	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	1432	Open in IMG/M
3300012212\|Ga0150985_120473491	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2033	Open in IMG/M
3300012349\|Ga0137387_10070649	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2378	Open in IMG/M
3300012350\|Ga0137372_10919714	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	618	Open in IMG/M
3300012356\|Ga0137371_10431103	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1021	Open in IMG/M
3300012358\|Ga0137368_10605288	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	696	Open in IMG/M
3300012360\|Ga0137375_10817297	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	748	Open in IMG/M
3300012380\|Ga0134047_1013376	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	506	Open in IMG/M
3300012385\|Ga0134023_1032692	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	726	Open in IMG/M
3300012400\|Ga0134048_1119605	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	532	Open in IMG/M
3300012409\|Ga0134045_1169657	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	622	Open in IMG/M
3300012410\|Ga0134060_1463430	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	540	Open in IMG/M
3300012469\|Ga0150984_120373744	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2011	Open in IMG/M
3300012955\|Ga0164298_10318006	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	972	Open in IMG/M
3300012957\|Ga0164303_11036824	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	587	Open in IMG/M
3300012958\|Ga0164299_10025356	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2499	Open in IMG/M
3300012984\|Ga0164309_11124620	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	655	Open in IMG/M
3300012986\|Ga0164304_11068412	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	644	Open in IMG/M
3300014157\|Ga0134078_10514420	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	559	Open in IMG/M
3300015077\|Ga0173483_10994894	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	502	Open in IMG/M
3300015162\|Ga0167653_1000279	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	14147	Open in IMG/M
3300015190\|Ga0167651_1002795	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	4170	Open in IMG/M
3300015371\|Ga0132258_10725439	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	2503	Open in IMG/M
3300015371\|Ga0132258_13012266	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1167	Open in IMG/M
3300018056\|Ga0184623_10115339	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1243	Open in IMG/M
3300018061\|Ga0184619_10259729	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	798	Open in IMG/M
3300018066\|Ga0184617_1272722	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	508	Open in IMG/M
3300018075\|Ga0184632_10108568	All Organisms → Viruses → Predicted Viral	1218	Open in IMG/M
3300018432\|Ga0190275_12842564	Not Available	560	Open in IMG/M
3300018433\|Ga0066667_10928459	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	749	Open in IMG/M
3300018466\|Ga0190268_10262029	Not Available	1004	Open in IMG/M
3300018466\|Ga0190268_10310992	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	953	Open in IMG/M
3300018466\|Ga0190268_10745671	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	729	Open in IMG/M
3300018469\|Ga0190270_10074168	All Organisms → cellular organisms → Bacteria	2492	Open in IMG/M
3300018469\|Ga0190270_10273340	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1486	Open in IMG/M
3300018476\|Ga0190274_13087831	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	560	Open in IMG/M
3300018481\|Ga0190271_13008261	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	566	Open in IMG/M
3300019255\|Ga0184643_1189372	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1086	Open in IMG/M
3300019879\|Ga0193723_1059443	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1114	Open in IMG/M
3300020003\|Ga0193739_1015402	Not Available	1999	Open in IMG/M
3300021080\|Ga0210382_10536836	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	518	Open in IMG/M
3300022756\|Ga0222622_10368957	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1004	Open in IMG/M
3300022756\|Ga0222622_10881030	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	656	Open in IMG/M
3300025910\|Ga0207684_10830782	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	780	Open in IMG/M
3300025937\|Ga0207669_10307136	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1208	Open in IMG/M
3300025942\|Ga0207689_10928468	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	734	Open in IMG/M
3300025972\|Ga0207668_11130051	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	703	Open in IMG/M
3300026004\|Ga0208416_1015369	Not Available	602	Open in IMG/M
3300026023\|Ga0207677_11342436	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	657	Open in IMG/M
3300026300\|Ga0209027_1009772	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3618	Open in IMG/M
3300026326\|Ga0209801_1055584	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1788	Open in IMG/M
3300026535\|Ga0256867_10005647	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	5469	Open in IMG/M
3300027647\|Ga0214468_1093069	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	766	Open in IMG/M
3300027907\|Ga0207428_10694580	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	728	Open in IMG/M
3300028597\|Ga0247820_10970798	All Organisms → cellular organisms → Bacteria	605	Open in IMG/M
3300028708\|Ga0307295_10183187	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	590	Open in IMG/M
3300028711\|Ga0307293_10071657	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1089	Open in IMG/M
3300028711\|Ga0307293_10308375	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	502	Open in IMG/M
3300028720\|Ga0307317_10286466	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	556	Open in IMG/M
3300028722\|Ga0307319_10109903	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	885	Open in IMG/M
3300028722\|Ga0307319_10313975	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	519	Open in IMG/M
3300028744\|Ga0307318_10093471	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1014	Open in IMG/M
3300028771\|Ga0307320_10067950	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1329	Open in IMG/M
3300028771\|Ga0307320_10075668	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1262	Open in IMG/M
3300028793\|Ga0307299_10134998	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	927	Open in IMG/M
3300028807\|Ga0307305_10472354	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	563	Open in IMG/M
3300028814\|Ga0307302_10462377	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	629	Open in IMG/M
3300028819\|Ga0307296_10107692	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1495	Open in IMG/M
3300028819\|Ga0307296_10333951	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	827	Open in IMG/M
3300028819\|Ga0307296_10691631	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	557	Open in IMG/M
3300028824\|Ga0307310_10127177	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1158	Open in IMG/M
3300028828\|Ga0307312_10023126	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3561	Open in IMG/M
3300028828\|Ga0307312_10172096	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1382	Open in IMG/M
3300028828\|Ga0307312_10239523	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1172	Open in IMG/M
3300028828\|Ga0307312_11176049	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	507	Open in IMG/M
3300028875\|Ga0307289_10078554	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	1336	Open in IMG/M
3300028878\|Ga0307278_10518096	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	520	Open in IMG/M
3300030006\|Ga0299907_10358535	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1179	Open in IMG/M
3300030990\|Ga0308178_1113289	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	589	Open in IMG/M
3300031091\|Ga0308201_10224413	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	634	Open in IMG/M
3300031229\|Ga0299913_10243582	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	1781	Open in IMG/M
3300031652\|Ga0315553_10013999	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	5321	Open in IMG/M
3300031949\|Ga0214473_10004248	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	17242	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	81.30%
Host-Associated	Host-Associated	18.70%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	74.82%
Plants	Host-Associated → Plants	18.70%
Aquatic	Environmental → Aquatic	6.47%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	74.82%
Rhizosphere	Host-Associated → Plants → Rhizosphere	10.79%
Rhizoplane	Host-Associated → Plants → Rhizoplane	7.19%
Sediment	Environmental → Aquatic → Sediment	4.32%
Freshwater	Environmental → Aquatic → Freshwater	1.44%
Marine	Environmental → Aquatic → Marine	0.72%
Roots	Host-Associated → Plants → Roots	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	69.06%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	7.91%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.32%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.32%
Loam	Environmental → Terrestrial → Soil → Loam	3.60%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.88%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.16%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.16%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.44%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	0.72%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.72%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	53.96%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	7.91%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	7.91%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.32%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.32%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.88%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.88%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	2.16%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.16%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.16%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.16%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.44%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.44%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.44%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	0.72%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.72%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.72%
Unclassified	Host-Associated → Plants → Roots → Rhizosphere → Unclassified	0.72%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	30.22%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	8.63%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	7.91%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.47%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	5.04%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.32%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.60%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	2.16%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	2.16%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.16%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	2.16%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.16%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.44%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.44%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	1.44%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.44%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.44%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.44%
Salt Marsh Sediment	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh Sediment	0.72%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.72%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.72%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.72%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.72%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.72%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Unclassified → Tabebuia Heterophylla Rhizosphere	0.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.72%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.72%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.72%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.72%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001205	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300001536	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A15-65cm-8A)- 1 week illumina	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300003373	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1	Host-Associated	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005884	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_302	Environmental	Open in IMG/M
3300005888	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_103	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006635	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost154B-three	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010085	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_2_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010119	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010133	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_8_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012380	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012385	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_4_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012395	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_8_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012400	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_4_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012409	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_16_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012410	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_16_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015162	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-4c, rock/ice/stream interface)	Environmental	Open in IMG/M
3300015190	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-4a, rock/ice/stream interface)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300018056	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018066	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1	Environmental	Open in IMG/M
3300018075	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300019255	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019879	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m2	Environmental	Open in IMG/M
3300020003	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2a2	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026004	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_302 (SPAdes)	Environmental	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026300	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)	Environmental	Open in IMG/M
3300026535	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT150D86 (HiSeq)	Environmental	Open in IMG/M
3300027647	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38 HiSeq	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028597	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day14	Environmental	Open in IMG/M
3300028708	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_152	Environmental	Open in IMG/M
3300028711	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150	Environmental	Open in IMG/M
3300028720	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_357	Environmental	Open in IMG/M
3300028722	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368	Environmental	Open in IMG/M
3300028744	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_367	Environmental	Open in IMG/M
3300028771	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369	Environmental	Open in IMG/M
3300028793	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028875	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300030006	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67	Environmental	Open in IMG/M
3300030990	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_149 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031091	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_355 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031229	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38	Environmental	Open in IMG/M
3300031652	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - Salt Marsh Sediment SW1601-40	Environmental	Open in IMG/M
3300031949	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT98D197	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10216J12902_1016846561	3300000956	Soil	LERGNLPPNWVRERDGSDYCLSCQRERAVEKALASAGEVDIEGRAKLRSAAVVEFEILRDPERTEGEIASAASTSVLAVRNARKRL
JGI10216J12902_1029256841	3300000956	Soil	MTSTWTNGLERGKLPPNWVRERDGSHYCLSCQRERAVEKALADAGEVGIEGRAKLRSAAVVEFEILRDPERTEGEIASAASTSVLAVRNARKRLGSRRRNG*
C688J13580_10223641	3300001205	Soil	MTXTWTNGLARGNTPPNWDRDGNLHYCLACRRERAVDRALDKAGDIGIEARAKVRSAAVVEFEIKRDPERTEGEIAKAARTSIGAVRKARRQLGLRPVTG*
A1565W1_117380552	3300001536	Permafrost	MTSTWTNGLETGSAPPNWARVGGLHYCLVCRRERAVESALEVAGDIGIEARAKVRSAAVVEFEITRNPQRTEGEIAKAARTSIGAVRKARKQMG
C688J35102_1194355151	3300002568	Soil	MTSTWTNGLGEGSAPPNWVLEDDGRHYCLVCRRERAIETALEEAGDVGIEARAKLRSQAVVRFEIARDPARTEGEIAKAARTSILAVRNARKEMAA*
C688J35102_1206357322	3300002568	Soil	MTSTWTNGLARGNTPPNWDRDGNLHYCLACRRERAVDRALDKAGDIGIEARAKVRSAAVVEFEIKRDPERTEGEIAKAARTSIGAVRKARRQLGLRPVTG*
JGI25407J50210_100236262	3300003373	Tabebuia Heterophylla Rhizosphere	MTSRWVHGLVDDATAPPNWLTDDEGNHFCLACRRERAVEMALAEAGELGTEARAKLRSAAVVEFEIERDPERPEGEIARAAHTSIGAVRKVRKQLQDSSAG*
Ga0062589_1002200152	3300004156	Soil	MTSTWTNGLERGNLPPNWIREPDGSHYCLFCQRERAVEKALADAGEVGIEGRAKLRSAAVVEFEILRDPERTEGEIASAASTSVLAVRNARKRLGSRRSNG*
Ga0062589_1008690782	3300004156	Soil	MTSTWTNGLERGNLPPNWVRERDGSHYCLSCQRERAVEKALADAGEVGIEGRAKLRSAAVVEFEILRDPERTEGEIASAASTSVLAVRNARKRLGSRRRNG*
Ga0063356_1012116942	3300004463	Arabidopsis Thaliana Rhizosphere	MTSTWTNGLDEGTTPPNWAREGGLHYCLVCRRERAIETALEDAGELAIEDRAKLRRSAMVEFEVRRDPERTEGEIAKAARTSIAAVRKARQRLGLRPVTG*
Ga0063356_1025073262	3300004463	Arabidopsis Thaliana Rhizosphere	CARCEMKSTWTNGLAEGSAPPNWVRDADGRHYCLVCRRERAIDEALEEAGEVGIEARAKLRSKAVVRFEIARDPERTEGEIAKAARTSIGAVRNARKELAS*
Ga0063356_1030563872	3300004463	Arabidopsis Thaliana Rhizosphere	PNWVQDPEGRHYCLSCRRERAVDEALEAAGDIGIDARAKLRSKAVVRFEIARDPERTEGEIARAARTSIGAVRNARKQAAEQS*
Ga0062592_1000783781	3300004480	Soil	PPNWVRERDGSHYCLSCQRERAVEKALADAGEVGIEGRAKLRSAAVVEFEILRDPERTEGEIASAASTSVLAVRNARKRLGSRRRNG*
Ga0062594_1015678842	3300005093	Soil	MKSTWTKGLAEGSAPPNWIRDAEGRHYCLSCRRERAIDEALEGAGDVGIEARAKLRSKAVVRFEIERDPERTEGEIARAARTSIGAVRNARREVAGQS*
Ga0066683_104859011	3300005172	Soil	MTSTWVNGLEEGTAPPNWIREADGNYYCLVCRRERAIDAALAEATDIGTEARAKLRATAVVEFEIERDPDRTEGEIAKASRTSVAAVRKTRKRLGL
Ga0068868_1017964702	3300005338	Miscanthus Rhizosphere	LSRGKLPPHWVREPDGSHYCLACRRERAIEAMLADADEVGAEARAKLRSAAVVEFEIQRDPERTEGEIAKAASTSVLAVRKARQRLGSRRSSG*
Ga0070659_1007231721	3300005366	Corn Rhizosphere	PPNWIRDAEGRHYCLSCRRERAIDEALEGAGDVGIEARAKLRSKAVVRFEIERDPERTEGEIARAARTSIGAVRNARREVAGQS*
Ga0070678_1011767961	3300005456	Miscanthus Rhizosphere	MTSTWTNGLERGNLPPNWIREPDGSHYCLFCQRERAVEKALADAGEVGIEGRAKLRSAAVVEFEILRDPERTEGEIASAASTSVLAVRNARKRLGSRRTNA*
Ga0070706_1007798831	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	LERGNLPPNWVRERDGSDYCLSCQRERAVEKALADAGEVGIEGRAKLRSAAVVEFEILRDPERTEGEIASAASTSVLAVRNARKRLGSRRRNG*
Ga0070741_100129729	3300005529	Surface Soil	MTSTWTNGLEGASAPPNWVREGGLYYCLACRRERAIEAAVERAGDVSIEAKAKLRSAALVEFEIKRDPKRTEGEIAKAAQTSIGAVRKVRRELGLRPVTG*
Ga0070741_105229122	3300005529	Surface Soil	MTSTWTNGLERGTMPPNWARDKDGRHYCLACQRERAAEKALQGAGELGIEGRAKVRSAAVVEFEIMRDPDRTEGEIASAASASVLAVRNARRRLGSRRAPR*
Ga0075291_10281702	3300005884	Rice Paddy Soil	MTSTWTNGLERGTLPPNWVRERDGSHYCLSCQRERAVDKALADAGEVGIEGRAKLRSAAVVEFEILRDPERTEGEIANAASTSVLAVRNARKRLGSRRSNG*
Ga0075289_10840782	3300005888	Rice Paddy Soil	MTSTWTNGLERGTLPPNWVRERDGSHYCLSCQRERAVDKALADAGEVGIEGRAKLRSAAVVEFEILRDPERTEGEIANAASTSVL
Ga0066652_1016685991	3300006046	Soil	MTSTWINGLAEGTAPPHWVREPGGSHYCLACRRERAIEVALEDAGDLGIEDRAQLRRAAVVEFEVRRDPERTEGEIAKAAHTSVAAVRKARGRLGLRPVTG*
Ga0075526_10037412	3300006635	Arctic Peat Soil	MTSTWTNGLDDDATAPPNWFTDENGDHYCLVCRRERAVDIALADAGELGTEARAKLRSTTVVEFEIERDPERPEGEIARAARTSIGAVRKARKRLEDSGGG*
Ga0066658_102767061	3300006794	Soil	MTSTWTNGLGEGTAPPHWVRDADGHHYCLVCRRERAIDAALEEAGEVGIVARAKLRSQAVVKFEIARDPERTEGEIARAAHTSIGAVRNARKEVAA*
Ga0075431_1019180422	3300006847	Populus Rhizosphere	CEMTSTWTNGLAEGSAPPNWVRDADGRHYCLVCRRERAIDDALEEAGEVGIEARAKLRSKAVVRFEIARDPERTEGEIAKAARTSIGAVRNARKELAS*
Ga0075433_100322215	3300006852	Populus Rhizosphere	MTSTWTNGLERGNLPPNWVRERDGSDYCLSCQRERAVEKALADAGEVGIEGRAKLRSAAVVEFEILRDPERTEGEIASAASTSVLAVRNARKRLGSRRRNG*
Ga0075434_1000532076	3300006871	Populus Rhizosphere	MTSTWTNGLERGNLPPNWVRERDGSDYCLSCQRERAVEKALADAGEVGIESRAKLRSAAVVEFEILRDPERTEGEIASAASTSVLAVRNARKRLGSRRRNG*
Ga0075434_1010235401	3300006871	Populus Rhizosphere	LPPNWIRESDGNHYCLVCRRERAIEATLAEACDVDPERRAKLRSTAVVEFEIKRDPDRTEGEIAKAAGTSVLAVRKARRRLGSRTNN*
Ga0075429_1008060412	3300006880	Populus Rhizosphere	MTSTWTNGLAEGSAPPNWVRDADGRHYCLVCRRERAIDDALEEAGEVGIEARAKLRSKAVVRFEIARDPERTEGEIAKAARTSIGAVRNARKELAS*
Ga0075424_1000879781	3300006904	Populus Rhizosphere	MTSTWTNGLERGNLPPNWVRERDGSDYCLSCQRERAVEKALADAGEVGIEGRAKLRSAAVVEFEILRDPERTEGEIASAASTSVLAVRNARKRLGSRRRNA*
Ga0075424_1008375651	3300006904	Populus Rhizosphere	MTSRWTLGLSGAELPPNWIRESDGNHYCLVCRRERAIEATLAEACDVDPEKRAKLRSTAVVEFEIKRDPDRTEGEIAKAAGTSVLAVRKARRRLGSRTNN*
Ga0075419_108704042	3300006969	Populus Rhizosphere	MTSTWTNGLAEGSAPPNWVRDADGRHFCLVCRRERAVEDALEEAGEVGIEARAKLRSKAVVRFEIARDPERTEGEIAKAARTSIGAVRNARKELAS*
Ga0075435_1004853542	3300007076	Populus Rhizosphere	MTSTWTNGLERGNLPPNWVRERDGSDYCLSCQRERAVEKALADAGEVGIEGRAKLRSAAVVEFEILRDPERTEGEFASAASTSVLAVRNARKRLG
Ga0066710_1000346012	3300009012	Grasslands Soil	MTSTWTNGLGEGTAPPHWVRDADGHHYCLVCRRERAIDAALEEAGEVGIVARAKLRSQAVVKFEIARDPERTEGEIARAAHTSIGAVRNARKEVAA
Ga0066710_1012474792	3300009012	Grasslands Soil	MTSTWINGLEEGTTPPNWVREPSGSHYCLVCRRERAIEMALEDAGELGIEDRAQLRRAAVVEFEVRRDPERTEGEIAKAAHTSVAAVRKARRRLGLRPVTG
Ga0066709_1009450682	3300009137	Grasslands Soil	MTSTWTNGLLEGVAGPPNWAREDDGRHYCLACRRERAIDVALEEAGEVDIEVRAKLRSEAVVKFEIARDPERTEGEIAKAARTSILAVRNARRAMAL*
Ga0111538_118500752	3300009156	Populus Rhizosphere	CEMKSTWTKGLAEGSAPPNWVQDTDGRHYCLSCRRERAVDEALEAAGDIGIDARAKLRSKAVVRFEIARDPDRTEGEIAKAARTSIGAVRNARQQAAEQS*
Ga0126313_100668602	3300009840	Serpentine Soil	MTSRWTHGLEGDATTPPNWFTDENGDHYCLVCRRERAIDIALAGAGDVGTEARAKLRSAAVVEFEIERDPERPEGEIARAAHTSIGAVRKVRKQLQGAGGQ*
Ga0126313_105076652	3300009840	Serpentine Soil	MTSTWTNGLDKGSAPPNWEKANGLYYCLACRRERAVDAALEDVGDVGIEKRAKVRSQAVVTFEILRDPDRTEGEIAKAARTSIGAVRKARKSVAA*
Ga0126304_102418613	3300010037	Serpentine Soil	MTSRWTNGLEGDATTPPNWFTDENGDHYCLVCRRERAIDIALADAGDVGTEARAKLRSAAVVEFEIERDPERPEGEIARAAHTSIGAVRKVRKQLQGAGGK*
Ga0126315_101575213	3300010038	Serpentine Soil	MTSTWLHGLDAGTAPPNWAQEGDGLYYCLACRRERAIERALENAGEIGIAARAKLRSTAVVEFELARDPERSEGEIARAARTSIGAVRKARRSAASLQFVKH*
Ga0126308_106821761	3300010040	Serpentine Soil	MTSTWTNGCDTKAPPNWEKQNGLYYCLSCRRERAVERALERAGDIGIEARAKVRSSAVVKFEILRDPDRTEGEIAKAARTSI
Ga0126312_1000005614	3300010041	Serpentine Soil	MTSTWTNGCDTKAPPNWEKQNGLYYCLSCRRERAVERALERAGDIGIEARAKVRSSAVVKFEILRDPDRTEGEIAKAARTSIGAVRKARREVAAGA*
Ga0126314_109050232	3300010042	Serpentine Soil	MTSRWTHGLEGDATTPPNWFTDENGDHYCLVCRRERAIDIALAGAGDVGTEARAKLRSAAVVEFEIERDPERPEGEIARAAHTSIGAVRKVRKQLHGAGGQ*
Ga0127445_10512261	3300010085	Grasslands Soil	MTSTWTNGLGEGSAPPNWVLEHDRHYCLACRRERAIEIALEEAGDVGIEARAKLRSQAVVKFEIARDPERTEGEIAKAARTSILAVRNARKEMAA
Ga0127452_11529641	3300010119	Grasslands Soil	EGSAPPNWVRDADGRHYCLACRRERAIDDALEEAGEVGIEVRAKLRSKAVVRFEIARDPERTEGEIAKAARTSIGAVRNARKEIAS*
Ga0127459_11522471	3300010133	Grasslands Soil	MKSTWTNGLAEGSAPPNWVRDADGRHYCLACRRERAIDDALEEAGEVGIEARAKLRSKAVVRFEIARDPERTEGQIAKAARTSIGAVRNARKE
Ga0134111_104363631	3300010329	Grasslands Soil	MTSTWTNGLGEGSAPPNWVLEHDRHYCLACRRERAIEIALEEAGDVGIEARAKLRSQAVVKFEIARDPERTEGEIAKAART
Ga0134080_102621622	3300010333	Grasslands Soil	EMTSTWTNGLGEGSAPPNWVLEHDRHYCLACRRERAIEIALEEAGDVGIEARAKLRSQAVVKFEIARDPERTEGEIAKAARTSILAVRNARKEMAAA*
Ga0134122_1000005210	3300010400	Terrestrial Soil	MKSTWTKGLAEGSAPPHWVQDPDGRHYCLSCRRERAVDDALEAAGDIGIDARAKLRSKAVVRFEIARDPERTEGEIAKAARTSIGAVRNARKQAAEQS*
Ga0137364_105817951	3300012198	Vadose Zone Soil	MTSTWTNGLGEGTAPPHWVRDADGHHYCLACRRERAIDAALEEAGEVGIEARAKLRSQAVVKFEIARDPERTEGEIARAARTSIGAVRNARKDVAA*
Ga0137374_100033258	3300012204	Vadose Zone Soil	MTSTWINGLEQGTAPPHWVRENGRHYCLACQRERAIERALEEAGEVGIEARAKLRSAAVVEFEIARDPERTEGEIARAARTSIGAVRKARKATD*
Ga0137374_100137819	3300012204	Vadose Zone Soil	MTSTWLNGLEEGTAPPHWVREKGRHYCLACQRERAIERALEEAGEVGIEARAKLRSAAVVEFEIARDPERTEGEIARAARTSIGAVRKARKATD*
Ga0137374_102648412	3300012204	Vadose Zone Soil	MKSTWTNGLAEGSAPPNWVRDADGRHYCLACRRERAIDDALEEAGEVGIEVRAKLRSKAVVRFEIARDPERTEGEIAKAARTSIGAVRNARKEIAS*
Ga0150985_1204734911	3300012212	Avena Fatua Rhizosphere	MTSTWTNGVEKGFAPPNWVKAKGLYYCLACRRERAVEEELDKAGKIGIEARAKIRSTAIVHFEIARDPDRTEGEIAKAAQTSIGAVRK
Ga0137387_100706492	3300012349	Vadose Zone Soil	MTSTWTNGLGEGTAPPHWVRDADGHHYCLVCRRERAIDAALEEAGEVGIEARAKLRSQAVVKFEIARDPERTEGEIARAAHTSIGAVRNARKEVAA*
Ga0137372_109197141	3300012350	Vadose Zone Soil	MTSRWTLGLEDGVDSPPNWAHEADGNYYCLICRRERAIEAALDDAGEVSAEARAKLRSTAVVEFEIRRDPERTEGEIAKAARASVAAVRKARQRLGLRRAA*
Ga0137371_104311032	3300012356	Vadose Zone Soil	MGAVTATQPVEWACARCEMTSRWTHGLDDAEAPPNWLCTPDGNFYCLACRRERAVEAALEGAGDAGIEARAKLRSSAVVEFELDRDPDRTEGEIARAARTSIGAVRKARKRLEGD*
Ga0137368_106052882	3300012358	Vadose Zone Soil	MKSTWTNGLAEGSAPPNWVRDADGRHYCLACRRERAIDDALEEAGEVGIEVRAKLRSKAVVRFEFARDPERTEGEIAKAARTSIGAVRNARKEIAS*
Ga0137375_108172972	3300012360	Vadose Zone Soil	MKSTWTNGLAEGSAPPNWVRDADGRHYCLACRRERAIDDALEEAGDVGIEARAKLRSKAVVRFEIARDPERTEGEIAKAARTSIGAVRNARKEIAS*
Ga0134047_10133761	3300012380	Grasslands Soil	MTSTWTNGLLEGVAGPPNWAQEEDGRHYCLACRRERAIDAALEEAGEVGIEARAKLRSEAVVKFEIARDPERTEGEIAKAARTSILAVRNARKAMAV*
Ga0134023_10326922	3300012385	Grasslands Soil	MTSTWTNGLARGNTPPNWDRDGNLHYCLACRRERAVDRALDKAGDIGIEARAKVRSAAVVEFEIKRDPERTEGEIAKAAGTSIGAVRVARKTVAGVTS*
Ga0134044_11829082	3300012395	Grasslands Soil	MTSTWTNGLHEGTAPPHWVRDAEGHHYCLACRRERAIDAALQEAGEVSIEARAKLRSQAVVKFEIARDPERTEGEIA
Ga0134048_11196051	3300012400	Grasslands Soil	MTSTWTNGLGEGSAPPNWVLEHDRHYCLACRRERAIEIALEEAGDVGIEARAKLRSQAVVKFEIARDPERTEGEIAKAARTSILAVRNARKEMAAA*
Ga0134045_11696572	3300012409	Grasslands Soil	MTSTWTNGLARGNTPPNWDRDGNLHYCLACRRERAVDRALDKAGDIGIEARAKVRSAAVVEFEIKRDPERTEGEIARAARTSIGAVRNARKDVAA*
Ga0134060_14634301	3300012410	Grasslands Soil	MKSTWTNGLAEGFTPPNWVRDADGRHYCLSCRRERAIDDALEEAGEVGIDARAKLRAKAVVRFEIARDPERTEGEIAKAARTSIG
Ga0150984_1203737441	3300012469	Avena Fatua Rhizosphere	MTSTWTNGVEKGFAPPNWVKAKGLYYCLACRRERAVEEELDKAGKIGIEARAKIRSTAIVHFEIARDPDRTEGEIAKAAQTSIGA
Ga0164298_103180062	3300012955	Soil	MTSTWTNGLGEGSAPPHWVRDPDGRHYCLACRRERAIEIALEEAGEVGIEARAKLRSQAVVRFEIARDPERTEGEIAKAARPSTLAD
Ga0164303_110368242	3300012957	Soil	MTSTWTNGLERGKLPPNWVREPDGSDYCLSCQRERAVDKALADAGEVGIEGRAKLRSAAVVEFEILRDPERTEGEIASAASTSVLAVRNARKRLGSRRTNA*
Ga0164299_100253563	3300012958	Soil	MTSTWTNGLGEGSAPPHWVRDPDGRHYCLACRRERAIEIALEEAGEVGIEARAKLRSQAVVKFEIARDPERTEGEIAKAARTSILAVRNARKAMAG*
Ga0164309_111246201	3300012984	Soil	MTSRWTLGLSGAELPPNWIRESDGNDYCLVCRRERAIEATLAEACDVDPEKRAKLRSTAVVEFEIKRDPDRTEGEIAKAAGTSVLAVRKARRLLGSRTNN*
Ga0164304_110684121	3300012986	Soil	WTNGLERGKLPPNWVRERDGSDYCLSCQRERAVDKALADAGEVGIEGRAKLRSAAVVEFEILRDPERTEGEIASAASTSVLAVRNARKRLGSRRRNA*
Ga0134078_105144202	3300014157	Grasslands Soil	GNTPPNWDRDGNLHYCLACRRERAVDRALDKAGDIGIEARAKVRSAAVVEFEIKRDPERTEGEIAKAARTSIGAVRKARRQLGLRPVTG*
Ga0173483_109948942	3300015077	Soil	MTSRWTQGLSGGKLPPHWVRESDGNHYCLACRRERAIEAMLAESSEAGAEARAKLRSAAVVEFEIQRDPERTEGEIAKAASTSVLAVRKARQRLGSRRSSG*
Ga0167653_100027913	3300015162	Glacier Forefield Soil	MTSTWTNGLTRGTSPPNWDREGNLHYCLACRRERAVDRALETAGDIGIEARAKVRSAAVVEFEIKRDPERTEGEIAKAARTSIGAVRKARRQLGLRPVTG*
Ga0167651_10027953	3300015190	Glacier Forefield Soil	MTSRWADGLDGGADMPPHWAREADGREYCLVCRRERAVEIALEEAEDIGTEARAKLRASTVVKFEIERDPERTEGEIAKAARTSIGAVRKARQQLGLRRAA*
Ga0132258_107254393	3300015371	Arabidopsis Rhizosphere	MTSTWTNGLERGTLPPNWVRERDGSHYCLSCQRERAVDKALADAGEVGIEGRAKLRSAAVVEFEILRDPERTEGEIANAASTSVLAVRNARKRLGSRRSNA*
Ga0132258_130122662	3300015371	Arabidopsis Rhizosphere	MKSTWTNGLAEGSAPPNWVQDEDGRHYCLACRRERAIDEALADAGEVGIEARAKLRSKALVRFEITRDPERTEGEIARAARTSIGAVRSARREISA*
Ga0184623_101153391	3300018056	Groundwater Sediment	MKSTWTNGLAEGSAPPNWVRDADGRHYCLACRRERAIDDALEEAGEVGIEARAKLRSKAVVRFEIARDPERTEGEIAKAARTSIGAVRNARKEIAS
Ga0184619_102597292	3300018061	Groundwater Sediment	MTSTWLNGLEGTAPPHWVRDSHGRHYCLACQRERAIERALEEAGEVGIEARAKLRSAAVVEFEIARDPERTEGEIARAARTSIGAVRKARKSGS
Ga0184617_12727221	3300018066	Groundwater Sediment	TASKTRPAEWTCARCEMKSTWTNGLTEGLAPPNWVRDAEGRHYCLACRRERAIDDALEEAGEIGIEARAKLRSKAVVRFEIARDPERTEGEIAKAARTSILAVRNARKAMAG
Ga0184632_101085681	3300018075	Groundwater Sediment	MKSTWTNGLAEGSAPPNWVRDADGRHYCLACRRERAIDDALEEAGEVGIEVRAKLRSKAVVRFEIARDPERTEGEIAKAARTS
Ga0190275_128425641	3300018432	Soil	TTAKTPRTQWTCARCQMTSTWINGLEGDATAPPNWFTDDNGDHYCLVCRRERAVEIALAEADGLNTEARAKLRSTAVVEFEIERDPERPEGEIARAARTSIAAVRKVRKQLQAPATG
Ga0066667_109284591	3300018433	Grasslands Soil	RPAQWTCARCEMTSTWTNGLGEGTAPPHWVRDADGHHYCLVCRRERAIDAALEEAGEVGIVARAKLRSQAVVKFEIARDPERTEGEIARAAHTSIGAVRNARKEDAA
Ga0190268_102620291	3300018466	Soil	DAPPHWDKVGRSFYCLACRRERAIEAALETCGEEGIEARAKVRSAAVVEFEILRDPERTEGEIARAARTSIGAVRKARKALAN
Ga0190268_103109922	3300018466	Soil	MTSTWTNGLEEGTAPPHWDKVGSSFYCLACRRERAIEAALETCGEEGIEARAKVRSAAVVEFGILRDPDRTEGEIARAARTSIGAVRKARKALTN
Ga0190268_107456712	3300018466	Soil	MTSTWTNGLAEGSAPPNWVRDADGRHYCLACRRERAIDDALEEAGEVGIEARAKLRSKAVVRFEIARDPERTEGEIAKAARTSIGAVRNARKEMGP
Ga0190270_100741682	3300018469	Soil	MTSTWTNGLEQGTAPPHWDSAGGKHYCLACRRERAIDAALEDAGDIGIEARAKVRSAAVVEFEILRDPDRTEGEIARAARTSIGAVRKARKALTN
Ga0190270_102733403	3300018469	Soil	MTSTWINGLEGDATAPPNWFTDDNGDHYCLVCRRERAVEMALAEADGLGTEARAKLRSTAVVEFEIERDPERPEGEIARAARTSIAAVRKVRKQLQAPATG
Ga0190274_130878311	3300018476	Soil	MTSTWTNGLEEGTAPPHWDSAGGKHYCLACRRERAIDAALEDAGDIGIEARAKVRSAAVVEFEILRDPDRTEGEIARAAR
Ga0190271_130082612	3300018481	Soil	MTSTWTNGLEQGTAPPHWDSAGGKHYCLACRRGRAIDAALEDAGDIGIEARAKVRSAAVVEFEILRDPDRTEGEIARAARTSIGAVRKAR
Ga0184643_11893721	3300019255	Groundwater Sediment	MTSTWTNGLHEGTAPPHWARDAEGHHYCLACRRERAIDAALQEAGEVSIEARAKLRSQAVVKFEIARDPERTEGEIARAARTSIGA
Ga0193723_10594432	3300019879	Soil	MTSTWTNGLGEGSAPPHWVRDPDGRHYCLACRRERAIEIALEEAGEVGIEARAKLRSQAVVRFEIARDPERTEGEIAKAARTSILAVRNARKAMAG
Ga0193739_10154022	3300020003	Soil	MTSTWTNGLEGDATAPPNWFTDDNGDHHCLVCRRERAVEMALAEADGLGTEARAKLRSTAVVEFEIERDPERPEGEIARAARTSIAAVRKARKRLDGTADD
Ga0210382_105368362	3300021080	Groundwater Sediment	AEWTCARCEMTSTWTNGLHEGTAPPHWARDAEGHHYCLACRRERAIDAALQEAGEVSIEARAKLRSQAVVKFEIARDPERTEGEIARAARTSIGAVRNARKEVAA
Ga0222622_103689572	3300022756	Groundwater Sediment	MTSTWTNGLEKGSAPPNWVKAKGLYYCLACRRERAVEEELDKAGKIGIEARAKIRSTAIVHFEIARDPDRTEGEIAKAAQTSIGAVRKARRSLD
Ga0222622_108810301	3300022756	Groundwater Sediment	PAQWTCARCEMTSTWTNGLGEGSAPPHWVRDPDGRHYCLACRRERAIEIALEEAGEVGIEARAKLRSQAVVKFEIARDPERTEGEIAKAARTSILAVRNARKAMAG
Ga0207684_108307821	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	LERGNLPPNWVRERDGSDYCLSCQRERAVEKALADAGEVGIEGRAKLRSAAVVEFEILRDPERTEGEIASAASTSVLAVRNARKRLGSRRRNA
Ga0207669_103071362	3300025937	Miscanthus Rhizosphere	MTSTWTNGLERGNLPPNWIREPDGSHYCLFCQRERAVEKALADAGEVGIEGRAKLRSAAVVEFEILRDPERTEGEIASAASTSVLAVRNARKRLGSRRSNG
Ga0207689_109284682	3300025942	Miscanthus Rhizosphere	PITTTTKTPTAEWTCARCEMTSRWTQGLSRGKLPPHWVREPDGSHYCLACRRERAIEAMLADADEVGAEARAKLRSAAVVEFEIQRDPERTEGEIAKAASTSVLAVRKARQRLGSRRSSG
Ga0207668_111300511	3300025972	Switchgrass Rhizosphere	ARCEMKSTWTKGLAEGSAPPNWIRDAEGRHYCLSCRRERAIDEALEGAGDVGIEARAKLRSKAVVRFEIERDPERTEGEIARAARTSIGAVRNARREVAGQS
Ga0208416_10153691	3300026004	Rice Paddy Soil	MTSTWTNGLERGTLPPNWVRERDGSHYCLSCQRERAVDKALADAGEVGIEGRAKLRSAAVVEFEILRDPERTEGEIANAASTSVLAVRNARKRLGSRRSNG
Ga0207677_113424361	3300026023	Miscanthus Rhizosphere	MTSRWTQGLSRGKLPPHWVREPDGSHYCLACRRERAIEAMLADADEVGAEARAKLRSAAVVEFEIQRDPERTEGEIAKAASTSVLAVRKARQRLGSRRSSG
Ga0209027_10097724	3300026300	Grasslands Soil	MTSTWTNGLLEGVAGPPNWAREDDGRHYCLACRRERAIDVALEEAGEVDIEVRAKLRSEAVVKFEIARDPERTEGEIAKAARTSILAVRNARRAMAL
Ga0209801_10555842	3300026326	Soil	MTSTWTNGLGEGTAPPHWVRDADGHHYCLACRRERAIDAALQEAGEVGIEARAKLRSQAVVKFEIARDPERTEGEIARAAHTSIGAVRNARKEVAA
Ga0256867_100056473	3300026535	Soil	MTSTWTNGLDDDATAPPNWFTDENGDHYCLVCRRERAVDIALADAGELGTEARAKLRSTTVVEFEIERDPERPEGEIARAARTSIGAVRKARKRLEDSGGG
Ga0214468_10930692	3300027647	Soil	MTSTWTNGLDEGTAPPHWTREGRSYYCLACRRERAVDAALEDAGDIGIEARAKVRSAAVVEFEILRDPERTEGEIARAART
Ga0207428_106945801	3300027907	Populus Rhizosphere	MKSTWTKGLAEGSAPPNWIRDAEGRHYCLSCRRERAIDEALEGAGDVGIEARAKLRSKAVVRFEIERDPERTEGEIARAARTSIGAVRNARREVAGQS
Ga0247820_109707981	3300028597	Soil	EGSAPPNWIRDAEGRHYCLSCRRERAIDEALEGAGDVGIEARAKLRSKAVVRFEIERDPERTEGEIARAARTSIGAVRNARREVAGQS
Ga0307295_101831871	3300028708	Soil	AQWTCARCEMTSTWTNGLGEGSAPPHWVRDPDGRHYCLACRRERAIEIALEEAGEVGIEARAKLRSQAVVRFEIARDPERTEGEIAKAARTSILAVRNARKAMAG
Ga0307293_100716571	3300028711	Soil	SIATATKARPAEWTCARCEMKSTWTNGLAEGSAPPNWVRDADGRHYCLVCRRERAIDDALEEAGEVGIEARAKLRSKAVVRFEIARDPERTEGEIAKAARTSIGAVRNARKEIAS
Ga0307293_103083752	3300028711	Soil	MTSRWTQGLSGGKLPPHWVREPDGNHYCLACRRERAIEAMLAEASEAGAEARAKLRSAAVVEFEIQRDPERTEGEIAKAASTSVLAVRKARQRLGSRRSSA
Ga0307317_102864662	3300028720	Soil	LPPHWVREPDGNHYCLACRRERAIEAMLAEASEAGAEARAKLRSAAVVEFEIQRDPERTEGEIAKAASTSVLAVRKARQRLGSRRSSA
Ga0307319_101099032	3300028722	Soil	MKSTWTNGLAEGSAPPNWVRDADGRHYCLVCRRERAIDDALEEAGEVGIEARAKLRSKAVVRFEIARDPERTEGEIAKAARTSIGAVRNARKEVAS
Ga0307319_103139751	3300028722	Soil	MKSRWTNGLAEGSAPPHWIREADGRHYCLACRRERAIDDALEEAGDVGIGDRAKLRSKALVRFELDRDPERTEGEIAKAARTSIGAVR
Ga0307318_100934712	3300028744	Soil	MTSTWTNGLETGSAPPHWVHEGGLHYCLACRRERAVDKALSKAGDIGIEARAKVRSAAVVEFEILRDPERTEGEIARAARTSIGAVRKARRALTN
Ga0307320_100679502	3300028771	Soil	MKSTWTNGLAEGSAPPNWVRDAEGRHYCLACRRERAIDDALEEAGEVGIEARAKLRSKAVVRFEIARDPERTEGEIAKAARTSIGAVRNARKEIAS
Ga0307320_100756682	3300028771	Soil	MKSTWTNGLTEGLAPPNWVRDAEGRHYCLACRRERAIDDALEEAGEIGIEARAKLRSKAVVRFEIARDPERTEGEIAKAARTSIGAVRNARKEIAPS
Ga0307299_101349981	3300028793	Soil	TWTNGLGEGSAPPHWVRDPDGRHYCLACRRERAIEIALEEAGEVGIEARAKLRSQAVVRFEIARDPERTEGEIAKAARTSILAVRNARKAMAG
Ga0307305_104723541	3300028807	Soil	MKSTWTNGLAEGSAPPNWVRDADGRHYCLACRRERAIDDALEEAGEIGIEARAKLRSKAVVKFEIARDPERTEGEIAKAARTSIGAVRNARKEIAS
Ga0307302_104623772	3300028814	Soil	MTSTWTNGLDEGTTPPNWAREGGLHYCLVCRRERAIETALEDAGELAIEDRAKLRRSTMVEFEVRRDPERTEGEIAKAART
Ga0307296_101076922	3300028819	Soil	MTSTWTNGLHEGTAPPHWARDAEGHHYCLACRRERAIDAALQEAGEVSIEARAKLRSQAVVKFEIARDPERTEGEIARAARTSIGAVRNARKEVAA
Ga0307296_103339511	3300028819	Soil	MTSTWTNGLEKGSAPPNWVKAKGLYYCLACRRERAVEEELDKAGKIGIEARAKIRSTAIVHFEIARDPDRTEGEIAKAAQ
Ga0307296_106916311	3300028819	Soil	MKSTWTNGLTEGLAPPNWVRDAEGRHYCLVCRRERAIDDALEEAGEIGIEARAKLRSKAVVKFEIARDPERTEGEIAKAARTSIGAVRNARKEIAPS
Ga0307310_101271772	3300028824	Soil	INPQLAQWTCARCEMTSTWTNGLGEGSAPPHWVRDPDGRHYCLACRRERAIEIALEEAGEVGIEARAKLRSQAVVRFEIARDPERTEGEIAKAARTSILAVRNARKAMAG
Ga0307312_100231262	3300028828	Soil	MKSTWTNGLAEGSAPPNWVRDADGRHYCLVCRRERAIDDALEEAGEVGIEARAKLRSKAVVRFEIARDPERTEGEIAKAARTSIGAVRNARKEIAS
Ga0307312_101720961	3300028828	Soil	MTSTWTNGLDEGSAPPNWVLEDDRHYCLACRRERAIETALEEAGDVGIEARAKLRSRAVVRFEIARDPERTEGEIAKAARTSILAVRNARKEMAAA
Ga0307312_102395232	3300028828	Soil	MTSRWTLGLDGAELPPNWEREPDGNYYCLVCRRERAIEIALANASEMDTEVRAKLRASAVVEFEIRRDPERTEGEIARAARTSIAAVRKARKEVGAARS
Ga0307312_111760492	3300028828	Soil	MTSRWTRGLDGVDSPPNWVRGPGGKHYCLACQRERAVDAALEGAADAGIEARAKLRSAAVVEFEITRDPDRTEGEIARSARTSIGAVRKARKRLETAA
Ga0307289_100785542	3300028875	Soil	MTSRWTQGLSGGKLPPHWVREPDGNHYCLACRRERAIEAMLAEASEAGAEARAKLRSAAVVEFEIQRDPERTEGEIAKAASTSVLAVRKARQRLGSRRSSG
Ga0307278_105180962	3300028878	Soil	MTSTWTNGLDEGTTPPNWAREGGLHYCLVCRRERAIETALEDAGELAIEERAKLRRSAMVEFEVRRDPERTEGEIAKAARTSIAAVRKARQRLGLRPVTG
Ga0299907_103585351	3300030006	Soil	MTSTWTNGLDEGTAPPHWTREGRSYYCLACRRERAVDAALEDAGDIGIEARAKVRSAAVVEFEILRDPERTEGEIARAARTSIGAVRKARKALAN
Ga0308178_11132891	3300030990	Soil	MTSTWTNGLGEGSAPPHWVRDPDGRHYCLACRRERAIEIALEEAGEVGIEARAKLRSQAVVRVEIARDPERTEGEIAKAARTSILAVRNARKAMAG
Ga0308201_102244132	3300031091	Soil	MTSTWTNGLGEGSAPPHWVRDPDGRHYCLACRRERAIEIALEEAGEVGIEARAKLRSQAVVRFEIARDPERTEGEIAKAARTSILAVRNARKEMAAA
Ga0299913_102435822	3300031229	Soil	MTSTWTNGLEDAAPPHWESEDDGSHYCLACRRERAVDAALDDAGDIGIEARAKLRSAAVVRFEILRDPERTEGEIAKAARTSIGAVRNARKALTEA
Ga0315553_100139994	3300031652	Salt Marsh Sediment	MTSTWPHGLERGKLPPNWVRDDDGRDYCLACQRERAVDKALEEAGQVGIEGRAKLRSAAVVEFEIKRDPERTEGEIANAASTSVLAVRKARQRLSSRRTTG
Ga0214473_1000424813	3300031949	Soil	MTSRWVNGLQDDAASAPPHWFTDEAGDHFCLACRRERAVEIALDDAPDASTEARAKLRSAAVVEFELERDPERTEGEIARSARTSIGAVRKARKRLGV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F054826

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences