Metagenome Family F054635

Basic Information
Family ID	F054635
Family Type	Metagenome
Number of Sequences	139
Average Sequence Length	42 residues
Representative Sequence	MTLTAKDVAEITRLLEDSSFDELHLEIDGLKLHLKRGAA
Number of Associated Samples	122
Number of Associated Scaffolds	139

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	99.24 %
% of genes near scaffold ends (potentially truncated)	93.53 %
% of genes from short scaffolds (< 2000 bps)	87.05 %
Associated GOLD sequencing projects	120
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.45

Most Common Taxonomy
Group	Bacteria (94.245 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (24.460 % of family members)
Environment Ontology (ENVO)	Unclassified (28.058 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (39.568 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 19.40% β-sheet: 17.91% Coil/Unstructured: 62.69%
Feature Viewer

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Pfam ID	Name	% Frequency in 139 Family Scaffolds
PF01326	PPDK_N	90.65
PF00391	PEP-utilizers	8.63
PF16177	ACAS_N	0.72

COG ID	Name	Functional Category	% Frequency in 139 Family Scaffolds
COG0574	Phosphoenolpyruvate synthase/pyruvate phosphate dikinase	Carbohydrate transport and metabolism [G]	90.65

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	94.24 %
Unclassified	root	N/A	5.76 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	94.24 %
Unclassified	root	N/A	5.76 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	94.24 %
Unclassified	root	N/A	5.76 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	83.45 %
Unclassified	root	N/A	5.76 %

Name	Rank	Taxonomy	Distribution
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	54.68 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	28.06 %
Unclassified	root	N/A	5.76 %

Name	Rank	Taxonomy	Distribution
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	54.68 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	17.99 %
Unclassified	root	N/A	5.76 %
Parvularculales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Parvularculales	2.16 %

Name	Rank	Taxonomy	Distribution
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	54.68 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	12.95 %
Unclassified	root	N/A	5.76 %
Erythrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Erythrobacteraceae	2.88 %
Parvularculaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Parvularculales → Parvularculaceae	2.16 %

Name	Rank	Taxonomy	Distribution
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	54.68 %
Sphingobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingobium	12.23 %
Unclassified	root	N/A	5.76 %
Erythrobacter/Porphyrobacter group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Erythrobacteraceae → Erythrobacter/Porphyrobacter group	2.88 %
Marinicaulis	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Parvularculales → Parvularculaceae → Marinicaulis	2.16 %

Name	Rank	Taxonomy	Distribution
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	54.68 %
unclassified Sphingobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingobium → unclassified Sphingobium	12.23 %
Unclassified	root	N/A	5.76 %
Erythrobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Erythrobacteraceae → Erythrobacter/Porphyrobacter group → Erythrobacter	2.88 %
Marinicaulis flavus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Parvularculales → Parvularculaceae → Marinicaulis → Marinicaulis flavus	2.16 %

Name	Rank	Taxonomy	Distribution
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	54.68 %
Sphingobium sp. SYK-6	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingobium → unclassified Sphingobium → Sphingobium sp. SYK-6	12.23 %
Unclassified	root	N/A	5.76 %
unclassified Erythrobacter	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Erythrobacteraceae → Erythrobacter/Porphyrobacter group → Erythrobacter → unclassified Erythrobacter	2.88 %
Marinicaulis flavus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Parvularculales → Parvularculaceae → Marinicaulis → Marinicaulis flavus	2.16 %

Name	Rank	Taxonomy	Distribution
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	54.68 %
Sphingobium sp. SYK-6	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingobium → unclassified Sphingobium → Sphingobium sp. SYK-6	12.23 %
Unclassified	root	N/A	5.76 %
Erythrobacter sp. SG61-1L	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Erythrobacteraceae → Erythrobacter/Porphyrobacter group → Erythrobacter → unclassified Erythrobacter → Erythrobacter sp. SG61-1L	2.88 %
Marinicaulis flavus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Parvularculales → Parvularculaceae → Marinicaulis → Marinicaulis flavus	2.16 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000881\|JGI10215J12807_1127967	All Organisms → cellular organisms → Bacteria	530	Open in IMG/M
3300001471\|JGI12712J15308_10053821	All Organisms → cellular organisms → Bacteria	1020	Open in IMG/M
3300002245\|JGIcombinedJ26739_101406040	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingobium → unclassified Sphingobium → Sphingobium sp. SYK-6	591	Open in IMG/M
3300003505\|JGIcombinedJ51221_10038441	All Organisms → cellular organisms → Bacteria	1775	Open in IMG/M
3300003999\|Ga0055469_10099561	All Organisms → cellular organisms → Bacteria	835	Open in IMG/M
3300004145\|Ga0055489_10218692	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingobium → unclassified Sphingobium → Sphingobium sp. SYK-6	597	Open in IMG/M
3300004463\|Ga0063356_103612920	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingobium → unclassified Sphingobium → Sphingobium sp. SYK-6	666	Open in IMG/M
3300005179\|Ga0066684_10919258	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	570	Open in IMG/M
3300005340\|Ga0070689_102082857	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingobium → unclassified Sphingobium → Sphingobium sp. SYK-6	519	Open in IMG/M
3300005365\|Ga0070688_101429532	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingobium → unclassified Sphingobium → Sphingobium sp. SYK-6	561	Open in IMG/M
3300005367\|Ga0070667_100515986	All Organisms → cellular organisms → Bacteria	1096	Open in IMG/M
3300005466\|Ga0070685_11561245	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingobium → unclassified Sphingobium → Sphingobium sp. SYK-6	510	Open in IMG/M
3300005529\|Ga0070741_11489914	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingobium → unclassified Sphingobium → Sphingobium sp. SYK-6	558	Open in IMG/M
3300005529\|Ga0070741_11542175	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingobium → unclassified Sphingobium → Sphingobium sp. SYK-6	546	Open in IMG/M
3300005538\|Ga0070731_10611820	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	725	Open in IMG/M
3300005541\|Ga0070733_10355625	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingobium → unclassified Sphingobium → Sphingobium sp. SYK-6	972	Open in IMG/M
3300005591\|Ga0070761_10113829	All Organisms → cellular organisms → Bacteria	1567	Open in IMG/M
3300005610\|Ga0070763_10670697	All Organisms → cellular organisms → Bacteria	605	Open in IMG/M
3300005764\|Ga0066903_103719084	All Organisms → cellular organisms → Bacteria	820	Open in IMG/M
3300005842\|Ga0068858_100819558	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingobium → unclassified Sphingobium → Sphingobium sp. SYK-6	908	Open in IMG/M
3300005842\|Ga0068858_102400823	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingobium → unclassified Sphingobium → Sphingobium sp. SYK-6	521	Open in IMG/M
3300005844\|Ga0068862_101545711	All Organisms → cellular organisms → Bacteria	670	Open in IMG/M
3300006102\|Ga0075015_100704709	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingobium → unclassified Sphingobium → Sphingobium sp. SYK-6	599	Open in IMG/M
3300006876\|Ga0079217_10912305	All Organisms → cellular organisms → Bacteria	629	Open in IMG/M
3300009147\|Ga0114129_10358063	All Organisms → cellular organisms → Bacteria	1931	Open in IMG/M
3300009147\|Ga0114129_13458439	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	506	Open in IMG/M
3300009700\|Ga0116217_10535108	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	734	Open in IMG/M
3300009792\|Ga0126374_10666449	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	778	Open in IMG/M
3300010048\|Ga0126373_10105205	All Organisms → cellular organisms → Bacteria	2617	Open in IMG/M
3300010361\|Ga0126378_11945075	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	670	Open in IMG/M
3300010371\|Ga0134125_12312160	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	584	Open in IMG/M
3300010376\|Ga0126381_100766429	All Organisms → cellular organisms → Bacteria	1384	Open in IMG/M
3300010376\|Ga0126381_104731037	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	524	Open in IMG/M
3300010376\|Ga0126381_104897216	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	514	Open in IMG/M
3300010398\|Ga0126383_12155854	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	644	Open in IMG/M
3300012207\|Ga0137381_10401902	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1195	Open in IMG/M
3300012209\|Ga0137379_11595002	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	551	Open in IMG/M
3300012362\|Ga0137361_10854616	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	826	Open in IMG/M
3300012931\|Ga0153915_12642009	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	587	Open in IMG/M
3300012971\|Ga0126369_10227628	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Erythrobacteraceae → Erythrobacter/Porphyrobacter group → Erythrobacter → unclassified Erythrobacter → Erythrobacter sp. SG61-1L	1819	Open in IMG/M
3300012977\|Ga0134087_10770834	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	518	Open in IMG/M
3300014839\|Ga0182027_11491982	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingobium → unclassified Sphingobium → Sphingobium sp. SYK-6	665	Open in IMG/M
3300015356\|Ga0134073_10133276	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	769	Open in IMG/M
3300017959\|Ga0187779_10051936	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Erythrobacteraceae → Erythrobacter/Porphyrobacter group → Erythrobacter → unclassified Erythrobacter → Erythrobacter sp. SG61-1L	2392	Open in IMG/M
3300017961\|Ga0187778_10195681	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingobium → unclassified Sphingobium → Sphingobium sp. SYK-6	1287	Open in IMG/M
3300017973\|Ga0187780_11179467	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	561	Open in IMG/M
3300017975\|Ga0187782_10812052	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	723	Open in IMG/M
3300018009\|Ga0187884_10332475	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	613	Open in IMG/M
3300018058\|Ga0187766_10405603	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	902	Open in IMG/M
3300018062\|Ga0187784_10794395	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	755	Open in IMG/M
3300018086\|Ga0187769_10029157	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	3732	Open in IMG/M
3300018433\|Ga0066667_10871532	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	772	Open in IMG/M
3300018481\|Ga0190271_11879213	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	710	Open in IMG/M
3300020582\|Ga0210395_10883952	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingobium → unclassified Sphingobium → Sphingobium sp. SYK-6	664	Open in IMG/M
3300021178\|Ga0210408_10559142	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	908	Open in IMG/M
3300021560\|Ga0126371_11433387	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	821	Open in IMG/M
3300025911\|Ga0207654_10397248	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	958	Open in IMG/M
3300025920\|Ga0207649_10710358	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	780	Open in IMG/M
3300025920\|Ga0207649_11373304	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	559	Open in IMG/M
3300025923\|Ga0207681_11825247	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	507	Open in IMG/M
3300025931\|Ga0207644_10000984	All Organisms → cellular organisms → Bacteria → Proteobacteria	18201	Open in IMG/M
3300025940\|Ga0207691_10473867	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1064	Open in IMG/M
3300026316\|Ga0209155_1001815	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	9927	Open in IMG/M
3300026322\|Ga0209687_1195430	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	626	Open in IMG/M
3300026332\|Ga0209803_1219641	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	675	Open in IMG/M
3300026547\|Ga0209156_10255992	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	809	Open in IMG/M
3300027676\|Ga0209333_1088568	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	846	Open in IMG/M
3300027842\|Ga0209580_10280780	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	829	Open in IMG/M
3300027867\|Ga0209167_10237664	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	976	Open in IMG/M
3300027965\|Ga0209062_1090166	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Erythrobacteraceae → Erythrobacter/Porphyrobacter group → Erythrobacter → unclassified Erythrobacter → Erythrobacter sp. SG61-1L	1316	Open in IMG/M
3300028381\|Ga0268264_12304911	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	545	Open in IMG/M
3300029910\|Ga0311369_10148739	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2260	Open in IMG/M
3300031170\|Ga0307498_10423856	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	528	Open in IMG/M
3300031226\|Ga0307497_10136675	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1002	Open in IMG/M
3300031236\|Ga0302324_102400703	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	647	Open in IMG/M
3300031543\|Ga0318516_10463568	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	728	Open in IMG/M
3300031544\|Ga0318534_10234299	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1059	Open in IMG/M
3300031546\|Ga0318538_10541191	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	631	Open in IMG/M
3300031564\|Ga0318573_10721577	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	536	Open in IMG/M
3300031713\|Ga0318496_10208835	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1074	Open in IMG/M
3300031719\|Ga0306917_10302629	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1235	Open in IMG/M
3300031724\|Ga0318500_10516549	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	601	Open in IMG/M
3300031747\|Ga0318502_10031450	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2684	Open in IMG/M
3300031751\|Ga0318494_10670357	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	607	Open in IMG/M
3300031768\|Ga0318509_10122508	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Parvularculales → Parvularculaceae → Marinicaulis → Marinicaulis flavus	1419	Open in IMG/M
3300031769\|Ga0318526_10356335	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	598	Open in IMG/M
3300031770\|Ga0318521_10171212	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1242	Open in IMG/M
3300031770\|Ga0318521_10384213	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	835	Open in IMG/M
3300031779\|Ga0318566_10106833	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Parvularculales → Parvularculaceae → Marinicaulis → Marinicaulis flavus	1376	Open in IMG/M
3300031781\|Ga0318547_10452329	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	791	Open in IMG/M
3300031781\|Ga0318547_10823631	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	578	Open in IMG/M
3300031792\|Ga0318529_10020987	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Erythrobacteraceae → Erythrobacter/Porphyrobacter group → Erythrobacter → unclassified Erythrobacter → Erythrobacter sp. SG61-1L	2606	Open in IMG/M
3300031798\|Ga0318523_10570126	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	558	Open in IMG/M
3300031821\|Ga0318567_10393098	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	785	Open in IMG/M
3300031846\|Ga0318512_10038228	All Organisms → cellular organisms → Bacteria	2093	Open in IMG/M
3300031846\|Ga0318512_10289143	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	813	Open in IMG/M
3300031854\|Ga0310904_10704382	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	699	Open in IMG/M
3300031858\|Ga0310892_11177729	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	546	Open in IMG/M
3300031912\|Ga0306921_10418092	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1564	Open in IMG/M
3300031918\|Ga0311367_12173947	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	533	Open in IMG/M
3300031947\|Ga0310909_10286500	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Parvularculales → Parvularculaceae → Marinicaulis → Marinicaulis flavus	1379	Open in IMG/M
3300031947\|Ga0310909_10920622	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	717	Open in IMG/M
3300031954\|Ga0306926_10364387	All Organisms → cellular organisms → Bacteria	1786	Open in IMG/M
3300032001\|Ga0306922_11272592	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	745	Open in IMG/M
3300032005\|Ga0307411_10366006	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1181	Open in IMG/M
3300032017\|Ga0310899_10238548	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	821	Open in IMG/M
3300032041\|Ga0318549_10142604	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1064	Open in IMG/M
3300032043\|Ga0318556_10243968	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	938	Open in IMG/M
3300032043\|Ga0318556_10707666	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	524	Open in IMG/M
3300032044\|Ga0318558_10704835	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	505	Open in IMG/M
3300032052\|Ga0318506_10191133	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	902	Open in IMG/M
3300032055\|Ga0318575_10322962	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	781	Open in IMG/M
3300032059\|Ga0318533_10358762	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1062	Open in IMG/M
3300032067\|Ga0318524_10030867	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2472	Open in IMG/M
3300032075\|Ga0310890_10595440	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	855	Open in IMG/M
3300032076\|Ga0306924_10277103	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1926	Open in IMG/M
3300032076\|Ga0306924_11510029	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingobium → unclassified Sphingobium → Sphingobium sp. SYK-6	712	Open in IMG/M
3300032091\|Ga0318577_10296717	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	773	Open in IMG/M
3300032094\|Ga0318540_10203068	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	955	Open in IMG/M
3300032261\|Ga0306920_102607725	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	693	Open in IMG/M
3300032783\|Ga0335079_11053498	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	826	Open in IMG/M
3300032805\|Ga0335078_10660329	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1305	Open in IMG/M
3300032805\|Ga0335078_10997067	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	992	Open in IMG/M
3300032805\|Ga0335078_12068125	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	606	Open in IMG/M
3300032892\|Ga0335081_11987631	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingobium → unclassified Sphingobium → Sphingobium sp. SYK-6	621	Open in IMG/M
3300032896\|Ga0335075_10643803	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	1035	Open in IMG/M
3300032955\|Ga0335076_10470526	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1140	Open in IMG/M
3300033134\|Ga0335073_10909633	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	925	Open in IMG/M
3300033158\|Ga0335077_10593398	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1157	Open in IMG/M
3300034115\|Ga0364945_0113612	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	799	Open in IMG/M
3300034151\|Ga0364935_0093953	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	916	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	87.05%
Host-Associated	Host-Associated	12.95%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	81.30%
Plants	Host-Associated → Plants	12.95%
Aquatic	Environmental → Aquatic	5.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	76.98%
Rhizosphere	Host-Associated → Plants → Rhizosphere	8.63%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.32%
Peat	Environmental → Terrestrial → Peat	2.88%
Freshwater	Environmental → Aquatic → Freshwater	2.16%
Sediment	Environmental → Aquatic → Sediment	2.16%
Marine	Environmental → Aquatic → Marine	1.44%
Floodplain	Environmental → Terrestrial → Floodplain	1.44%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	56.12%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	12.95%
Loam	Environmental → Terrestrial → Soil → Loam	7.91%
Soil	Host-Associated → Plants → Rhizosphere → Soil	5.76%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.32%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.88%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.88%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.16%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.44%
Wetlands	Environmental → Aquatic → Marine → Wetlands	1.44%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	1.44%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.72%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	29.50%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	18.70%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	12.23%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	5.76%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.04%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.32%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.32%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.88%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.88%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.88%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.16%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.16%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	1.44%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	1.44%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.72%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.72%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.72%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.72%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.72%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.72%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	24.46%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	6.47%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	6.47%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	5.76%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	5.04%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.04%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.88%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.88%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.88%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.16%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.16%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.16%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	2.16%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	1.44%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.44%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.44%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.44%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	1.44%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.44%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.44%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.44%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.44%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.72%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.72%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.72%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.72%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.72%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.72%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.72%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.72%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	0.72%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.72%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.72%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.72%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.72%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.72%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000881	Soil microbial communities from Great Prairies - Wisconsin Restored Prairie soil	Environmental	Open in IMG/M
3300001471	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300003999	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleA_D2	Environmental	Open in IMG/M
3300004145	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqB_D2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009157	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014839	Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015258	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT45_16_1Da	Environmental	Open in IMG/M
3300015356	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018009	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_40	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026316	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122 (SPAdes)	Environmental	Open in IMG/M
3300026322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136 (SPAdes)	Environmental	Open in IMG/M
3300026332	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)	Environmental	Open in IMG/M
3300026547	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)	Environmental	Open in IMG/M
3300027676	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O3 (SPAdes)	Environmental	Open in IMG/M
3300027717	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes)	Host-Associated	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027965	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen12_06102014_R2 (SPAdes)	Environmental	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300029910	III_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031918	III_Fen_N3 coassembly	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032005	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1	Host-Associated	Open in IMG/M
3300032017	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D4	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300034115	Sediment microbial communities from East River floodplain, Colorado, United States - 29_s17	Environmental	Open in IMG/M
3300034151	Sediment microbial communities from East River floodplain, Colorado, United States - 2_s17	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.45
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.45
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F054635

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10215J12807_11279671	3300000881	Soil	VTLTAREIAEITRLLEDSSFDELHLEIDGLKLHLRRGS
JGI12712J15308_100538212	3300001471	Forest Soil	VSLTAKDVAEITRLLEASHFDELYLELDGLKLSLTRGSPANA
JGIcombinedJ26739_1014060402	3300002245	Forest Soil	MTLTAKDVAEIMRLLEQSSFDTLSLEIDGVKLNLQRGSPAPLR
JGIcombinedJ51221_100384411	3300003505	Forest Soil	VTLTAKDVAEITRLLEESDFDELYLELDGMTLSLRRTGSAELADETAS
Ga0055469_100995613	3300003999	Natural And Restored Wetlands	VTLTAREVAEITRLLEDSNFDELHLEIDGLKLHLKRGNAASTEPLPG
Ga0055489_102186922	3300004145	Natural And Restored Wetlands	VTLTARDVAEIERLLEESTFDELHLEIDGLKLSLKRHGTGPTAAAA
Ga0063356_1036129202	3300004463	Arabidopsis Thaliana Rhizosphere	MTLTARDVAEITRLLEDSSFDELELEIDGLKIHLRRGSGNGDIP
Ga0066684_109192581	3300005179	Soil	VPLTAEDVAEITRLLEESQFDELHLEHAGFKLTLKRGAAL
Ga0070689_1020828571	3300005340	Switchgrass Rhizosphere	MSLTARDIAEITRLLEDSSFDELQLEIDGLKIHLRRSGAP
Ga0070688_1014295321	3300005365	Switchgrass Rhizosphere	MSLTARDVAEITKLLEDSSFDELDLEIDGLKIHLRRSGAP
Ga0070667_1005159861	3300005367	Switchgrass Rhizosphere	VTLTAKDVAEITRLLEESTFDELYLELDGVKLSLKRNGAA
Ga0070685_115612452	3300005466	Switchgrass Rhizosphere	MTLTARDIAEITRLLEDSSFDELELEIDGLKIHLRRNGDI
Ga0070741_114899142	3300005529	Surface Soil	VTLTAKEVAEITRLLEESSFDEMDLELDGLRLTLRRHG
Ga0070741_115421752	3300005529	Surface Soil	VTLTAKDVAQITRLLEDSSFDEMILELDGLKLTLRRQGA
Ga0070731_106118202	3300005538	Surface Soil	LSLTSKDVAEITRILEESSFDELYLEINGFKLTLKRT
Ga0070733_103556252	3300005541	Surface Soil	VTLTSKDVAEITRLLEQSAFTELQLEIDGLKISLKRDAAG
Ga0070761_101138291	3300005591	Soil	VSLTSKDVAEITRILEESSFDELYLEINGFKLTLKRSGAASSN
Ga0070763_106706972	3300005610	Soil	VSLTAKDVAEITRLLEASHFDELYLELDGLKLSLTRGSPANAP
Ga0066903_1037190842	3300005764	Tropical Forest Soil	VPLTAQDVAEITRLLEESEFDELHIEHEGLKLTLRRHA
Ga0068858_1008195582	3300005842	Switchgrass Rhizosphere	MTLTARDIAEITRLLEDSSFDELELEIDGLKIHLR
Ga0068858_1024008231	3300005842	Switchgrass Rhizosphere	MTLTARDIAEITRLLEDSSFDELELEIDGLKIHLRRNGDIPRFL
Ga0068862_1015457112	3300005844	Switchgrass Rhizosphere	VSLTSKDIAEITRLLEDSSFDELELEIAGLKVHLRRGASAL
Ga0075019_108569432	3300006086	Watersheds	VSLTSADVAEIMRLVEQSVFDELHLEIDGIKLNLRRGAASSGPATLVAASPPT
Ga0075015_1007047091	3300006102	Watersheds	MTLTAKDVAEIMRLLEESNFDSLALEINGIKLNLQRGSAAPVSPAPE
Ga0079217_109123052	3300006876	Agricultural Soil	VTLTAREIAEITRLLEESSFDELHLEIDGLKLHLKRGST
Ga0114129_103580631	3300009147	Populus Rhizosphere	VTLTAREIAEITRLLEDSSFDELHLEIDGLKLHLRRGSPAP
Ga0114129_134584391	3300009147	Populus Rhizosphere	VTLTAREIAEITRLLEDSNFDELRLEIDGLKLHLKR
Ga0105092_102996091	3300009157	Freshwater Sediment	VTITARDVAEITRLLEDSSFDELHLEIDGLKLHLKRGAAVPGQPTTDSAA
Ga0116217_105351081	3300009700	Peatlands Soil	LTLTAKDVAEIMRILEESSFDQLTLEMDGVKLSLQRGSALPQV
Ga0126374_106664491	3300009792	Tropical Forest Soil	VPLTAQDVAEITRLLEESDFLELRIEHEGFKLTLKRAAPAGGE
Ga0126373_101052051	3300010048	Tropical Forest Soil	LTLTSKDVAEIIRILEESSFDELTLEIDGVKLSLQRGSGLRPTPN
Ga0126378_119450752	3300010361	Tropical Forest Soil	MTLTAKDVAEIMRLLEESSFDSLSLEINGIKLNLQRG
Ga0134125_123121602	3300010371	Terrestrial Soil	VPLTAQDVAEILRLLEESDFLELRIEHEGLKLTLRRAGARDADTA
Ga0126381_1007664291	3300010376	Tropical Forest Soil	LTLTAKDVAEIIRILEESSFDELTLEIDGVKLSLQRGSG
Ga0126381_1047310372	3300010376	Tropical Forest Soil	VPLTAQDVAEITRLLEESEFDELHIEHEGLKLTLKRNAAR
Ga0126381_1048972161	3300010376	Tropical Forest Soil	LTLTAKDVAEILRLLEESSFDELSLELEGVKLKLQRGSGRP
Ga0126383_121558542	3300010398	Tropical Forest Soil	VPLTAQDVAEIMRLLEESDFLELRIEHEGLKLTLRR
Ga0137381_104019022	3300012207	Vadose Zone Soil	VTLTAKDVAEITRLLEESNFDELYLELDGLKLSLRRGSAADIQPL
Ga0137379_115950022	3300012209	Vadose Zone Soil	VTLTAQDVAQITRLLEESNFDELYLEIDGLKLSLR
Ga0137361_108546162	3300012362	Vadose Zone Soil	VPLTAGDVAEIVRLLEESEFDELHIEQDGLKLTLKRGSAPTAPGA
Ga0153915_126420092	3300012931	Freshwater Wetlands	VSLTAKDVAEIMRLLEDSSFDTLDLEVGDMRLSLRRGEGGIAA
Ga0126369_102276281	3300012971	Tropical Forest Soil	VPLTAKDVAEITRLLEQSDFLELRLEHEGFKLTLRRAGARTQG
Ga0134087_107708342	3300012977	Grasslands Soil	VPLSAQDVAEITRLLEESEFDELHLEHEGFKLTLKRGAAARN
Ga0182027_114919822	3300014839	Fen	VTLTAKDVQEIMRLLESSSFDSLSLEMNGVKLHLERGSTAAPAQQ
Ga0180093_10763211	3300015258	Soil	VTLTAKDVAEITRLLEDSSFDELHLEIDGLKLDLKRGAPVPAQPATDSAAV
Ga0134073_101332762	3300015356	Grasslands Soil	VPLSAQDVAEITRLLEESEFDELHLEHEGFKLTLKRGAAARNTA
Ga0187779_100519363	3300017959	Tropical Peatland	VPLTAKDVAEITRLLEESDFLELRLEHEGFKLTLKRAGAR
Ga0187778_101956812	3300017961	Tropical Peatland	MTLTAKDVAEIMRLLESSGFDSLSLEINGVKLNLQRGSAAPVRQTTPVAIAPP
Ga0187780_111794671	3300017973	Tropical Peatland	VTLTAKDVAEITRLLEESSFDELYLELDGLKLSLRRGGGAGST
Ga0187782_108120521	3300017975	Tropical Peatland	VSLTSKEVAEITRLLEDSSFDELHLEIDGLTLKLRRAAAASPA
Ga0187782_110039131	3300017975	Tropical Peatland	VPLTAQDVAEITRLLEQSDFLELRIEHEGFKLILRRRGARTDLSAVTSAAAAADA
Ga0187884_103324752	3300018009	Peatland	LTLTAKDVAEIMRLLEDSSFDSLSLEIDGMKLHLQ
Ga0187766_104056032	3300018058	Tropical Peatland	VTLTAKDVAEIMRLLEESSFDSLSLEIGGVKLNLQRGSAAPVRQVSAPAAA
Ga0187784_107943951	3300018062	Tropical Peatland	MTLTAKDVAEIMRLLEQSSFDSLSLEIDGVKLHLQRGSAAPA
Ga0187769_100291574	3300018086	Tropical Peatland	MTLTAKDVAEIMRLLEQSSFDSLSLEIDGVKLNLQRGSAVPVHQAPAAAAPQ
Ga0066667_108715322	3300018433	Grasslands Soil	VPLSAQDVAEITRLLEESEFDELHLEHEGFKLTLKRG
Ga0190271_118792131	3300018481	Soil	VSLTARDIAEITRLLEDSSFDELELEIDGLKIHLVRS
Ga0210395_108839521	3300020582	Soil	VTLTAKDVAEIMRLLEQSSFDSLSIEIDGVKLNLQRGSAAPVQRAVVAAPS
Ga0210408_105591421	3300021178	Soil	VTLTARDVAEITRLLEESDFDELHLEHEGFRLTLRRGAGGARAP
Ga0126371_114333871	3300021560	Tropical Forest Soil	VPLTAQDVAEITRLLEESDFLELRIEHEGFKLTLKRAAPAGGEA
Ga0207654_103972482	3300025911	Corn Rhizosphere	VPLSAADVAEIARLLEESDFEELHVEQDGLKLTLRRGA
Ga0207649_107103582	3300025920	Corn Rhizosphere	MTLTARDVAEITRLLEDSSFDELELEIDGLKIHLRRGSGNGDI
Ga0207649_113733042	3300025920	Corn Rhizosphere	VTLTAKDVAEIMRLLEDSSFDELDLQVGDLKLNLRRGSPLPRPTGGPP
Ga0207681_118252471	3300025923	Switchgrass Rhizosphere	MTLTARDVAEITRLLEDSSFDELELEIDGLKIHLRRGSGNG
Ga0207650_104895631	3300025925	Switchgrass Rhizosphere	VTLTAKDVAEITRLLEESNFDELYLELDGLKLSLRHGSAGAAQPLGNSDGP
Ga0207644_100009841	3300025931	Switchgrass Rhizosphere	VTLTAKDVAEITRLLEESNFDELYLELDGLKLSLRRGSA
Ga0207691_104738672	3300025940	Miscanthus Rhizosphere	VTLTAREIAEITRLLEESSFDELHLEIDGLKLHLRRGSPAP
Ga0207691_115954542	3300025940	Miscanthus Rhizosphere	MTLTARDIAEITRLLEDSSFDELELEIDGLKIHLRRNGDIPRFLA
Ga0209155_10018151	3300026316	Soil	VPLSAQDVAEITRLLEESEFDELHLEHEGFKLTLKRGAAVRREG
Ga0209687_11954301	3300026322	Soil	VPLSAQDVAEITRLLEESEFDELHLEHEGFKLTLKR
Ga0209803_12196411	3300026332	Soil	VPLTAGDVAEIVRLLEGSEFDELHIEQDGLKLTLKRGSAP
Ga0209156_102559921	3300026547	Soil	VPLTAGDVAEILRLLEESEFDELHIEQDGLKLTLKRGSAPRGKGAET
Ga0209333_10885682	3300027676	Forest Soil	VSLTSKEVAEITRLLEDSSFDELYLELGDLKLSLKRSAAAPDSTDALV
Ga0209998_100051274	3300027717	Arabidopsis Thaliana Rhizosphere	VTLTAREIAEITRLLEDSSFDELHLEIDGLKLHLRRRSTAPPQMVDDSAVAGV
Ga0209580_102807802	3300027842	Surface Soil	MPLTAQDVAEITRLLEESEFDELYLEQDGLKLFTRHDR
Ga0209167_102376641	3300027867	Surface Soil	VTLTSKDVAEITRLLEQSAFTELQLEIDGLKISLKRDAA
Ga0209062_10901663	3300027965	Surface Soil	MTLTAKDVAEILRLLDSSSFDTLSLEMNGVKLNLQRGSAAPVRQSAAPAP
Ga0268264_123049112	3300028381	Switchgrass Rhizosphere	VTLTAREIAEITRLLEESSFDELHLEIDGLKLHLRRGSPAPPQMVD
Ga0311369_101487391	3300029910	Palsa	VTLTSKDVAEITRLLEESTFTELQLEVDGLKISLRRGAA
Ga0307498_104238562	3300031170	Soil	MSLTARDIAEITRLLEDSSFDELDLEIDGLKIHLVRS
Ga0307497_101366751	3300031226	Soil	MSLTARDIAEITRLLEDSSFDELDLEIDGLKIHLR
Ga0302324_1012809562	3300031236	Palsa	VTLTSKDVAEITRLLEDSTFTELHLEIDGLKISLRRGAPPPSTPTATGAERAETRP
Ga0302324_1024007031	3300031236	Palsa	VTLTSKDVAEITRLLEESTFTELHLEIDGLKISLRRGAPSSSGPST
Ga0318516_104635682	3300031543	Soil	VPLTAQDVAEITRLLEESDFLELRLEHEGFKLTLKRAAVA
Ga0318534_102342992	3300031544	Soil	VPLTAQDVAEITRLLEESDFLELRLEHEGFKLTLKRAAVASEAGA
Ga0318538_105411911	3300031546	Soil	VPLTAKDVAEIMRLLEESDFLELRLEHEGFKLTLKRAVVG
Ga0318573_107215771	3300031564	Soil	VPLTAKDVAEIMRLLEESDFLELRLEHEGFKLTLKRAGARNAGTDD
Ga0318496_102088352	3300031713	Soil	VPLTAQDVAEITRLLEESDFLELRLEHEGFKLTLKRAA
Ga0306917_103026291	3300031719	Soil	VPLTAKDVAEITRLLEESDFIELRLEHEGFKLTLKRAG
Ga0318500_105165492	3300031724	Soil	VPLTAQDVAEIVRLLEKSDFLELRIEHEGLKLTLKRAGARDADTA
Ga0318502_100314503	3300031747	Soil	VPLTAQDVAEITRLLEESDFLELRIEHEGFKLTLKRAP
Ga0318494_106703572	3300031751	Soil	VPLTARDVAEIARLLEESDFEELHIEHEGFKLTLKRGAAARSESA
Ga0318509_101225083	3300031768	Soil	VPLTAQDVAEITRLLEESDFLELRIEHEGFKLTLKRAGARGARTD
Ga0318526_103563352	3300031769	Soil	VPLTAQDVAEILRLLEESDFLELRIEHEGLKLTLR
Ga0318521_101712122	3300031770	Soil	VPLTAQDVAEITRLLEESDFLELRIEHEGFKLTLK
Ga0318521_103842132	3300031770	Soil	VPLTAKDVAEIMRLLEESDFLELRLEHEGFKLTLKRAG
Ga0318566_101068333	3300031779	Soil	VPLTAKDVAEIMRLLEESDFLELRLEHEGFKLTLKRAGAR
Ga0318547_104523292	3300031781	Soil	VPLTAKDVAEITRLLEGSDFLELRLEHEGFKLTLKRAGSSLP
Ga0318547_108236312	3300031781	Soil	VPLTAQDVAEITRLLEESDFLELRIEHEGMKLTLKRAGARGAL
Ga0318529_100209871	3300031792	Soil	VPLTAKDVAEITRLLEESDFIELRLEHEGFKLTLKRAGAPRS
Ga0318523_105701261	3300031798	Soil	VPLTAQDVAEITRLLEESDFLELRIEHEGMKLTLKRAGA
Ga0318567_103930981	3300031821	Soil	VPLTAQDVAEITRLLEESDFLELRIEHEGFKLTLKRAGARG
Ga0318512_100382283	3300031846	Soil	VPLTAQDVAEITRLLEESDFLELRIEHEGMKLTLK
Ga0318512_102891431	3300031846	Soil	VPLTAQDVAEITRLLEESDFLELRIEHEGFKLTLKR
Ga0310904_107043822	3300031854	Soil	VTLTAREIAEITRLLEESSFDELHLEIDGLKLHLRRGSPAPPQMVDDS
Ga0310892_111777292	3300031858	Soil	MTLTARDIAEITRLLEDSSFDELELELDGLKIHLRRNGDIPDLPAKG
Ga0306921_104180921	3300031912	Soil	VPLTAKDVAEIMRLLEESDFLELRLEHEGFKLTLKRAGARNAGTDDRAT
Ga0311367_121739472	3300031918	Fen	VSLTAKDVAEILKLLEDSSFNELTLDMNGVKIELR
Ga0310909_102865001	3300031947	Soil	VPLTAQDVAEITRLLEESDFLELRIEHEGFKLTLKRAPAA
Ga0310909_109206222	3300031947	Soil	LTLTAKDVAEILRILEESSFDQLSLEIDGVKLNLQRTSAV
Ga0306926_103643871	3300031954	Soil	LTLTAKDVAEILRILEESSFDQLSLEIDGMKLNLQRTSAVPQAPEAPR
Ga0306922_112725921	3300032001	Soil	VPLTAQDVAEILRLLEESDFLELRIEHEGLKLTLRRAG
Ga0307411_103660062	3300032005	Rhizosphere	MTLTARDIAEITRLLEDSSFDELELEIDGLKVHLK
Ga0310899_102385482	3300032017	Soil	VTLTAREIAEITRLLEESSFDELHLEIDGLKLHLRRGSPAPPQMVDDSA
Ga0318549_101426041	3300032041	Soil	VPLTAQDVAEIVRLLEKSDFLELRIEHEGLKLTLKRAGARDADTAG
Ga0318556_102439681	3300032043	Soil	VPLTAQDVAEITRLLEESDFLELRLEHEGFKLTLKRAAVASEA
Ga0318556_107076662	3300032043	Soil	LTLTAKDVAEILRILEESSFDQLSLEIDGMKLNLQRTSAVPQ
Ga0318558_107048352	3300032044	Soil	VPLTAKDVAEIMRLLEESDFLELRLEHEGFKLTLK
Ga0318506_101911332	3300032052	Soil	VPLTAKDVAEIMRLLEESDFLELRLEHEGFKLTLKRAGARNAG
Ga0318575_103229621	3300032055	Soil	VPLTAQDVAEITRLLEESDFLELRIEHEGFKLTLKRA
Ga0318533_103587621	3300032059	Soil	VPLTAQDVAEITRLLEESDFLELRLEHEGFKLTLK
Ga0318524_100308673	3300032067	Soil	VPLTAKDVAEIMRLLEESDFLELRLEHEGFKLTLKRAGAQN
Ga0310890_105954401	3300032075	Soil	MTLTARDIAEITRLLEDSSFDELELEIDGLKIHLRR
Ga0306924_102771031	3300032076	Soil	VPLTAKDVAEIMRLLEESDFLELRLEHEGFKLTLKRAGARNAGTDDRA
Ga0306924_115100292	3300032076	Soil	MTLTAKDVAEIMRLLEQSSFDSLSLEMNGVKLNLRRGAAVP
Ga0318577_102967172	3300032091	Soil	VPLTAQDVAEITRLLEESDFLELRLEHEGFKLTLKR
Ga0318540_102030681	3300032094	Soil	VPLTAQDVAEITRLLEESEFDELHIEHEGLKLTLRRRAAHY
Ga0306920_1026077251	3300032261	Soil	LTLTAKDVAEILRILEESSFDQLSLEIDGVKLNLQRTSAVPQAPGH
Ga0335079_110534981	3300032783	Soil	VTLTAKDVAEITRLLEDSSFDELHLEIDGLKLSLRRSGAPPTRAALGTPA
Ga0335078_106603293	3300032805	Soil	VTLTAKDVQEIMRLLESSSFDSLSLEMNGVKLHLE
Ga0335078_109970671	3300032805	Soil	MTFTAKDVAEIMRLLESSTFDSLSLEIDGVKLNLQRGSTSPVQPPAAAQ
Ga0335078_120681252	3300032805	Soil	VTLTAKDVAEITRLLEDSSFDELHLEIDGLKLSLRRSGAPPTRAA
Ga0335081_119876311	3300032892	Soil	VTLTAKDVAEIMRLLEESSFDSLSLEMGGVKLNLQRGSAAPVRQASAPAT
Ga0335075_106438032	3300032896	Soil	VTLTAKDVAEITKLLEESSFDELSLEIDGVKLSLRRGGA
Ga0335076_104705261	3300032955	Soil	VSLTAKDVLEITRLLEASDFTELNLEIDGLKLNLRRGSAPSEPTVAVAS
Ga0335073_109096331	3300033134	Soil	VTLTAKDVAEIMRLLETSSFNSLSLEIDGVKLNLQRGSAVP
Ga0335077_105933982	3300033158	Soil	MTLTAKEVAEITRLLEESSFDELNLEMEGLKLTLRR
Ga0364945_0113612_3_119	3300034115	Sediment	MTLTAKDVAEITRLLEDSSFDELHLEIDGLKLHLKRGAA
Ga0364935_0093953_767_916	3300034151	Sediment	MTLTAKDVAEITRLLEDSSFDELHLEIDGLKLDLKRGAPVPAQPATDSAA

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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