NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F054495

Metagenome Family F054495

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F054495
Family Type Metagenome
Number of Sequences 139
Average Sequence Length 51 residues
Representative Sequence LTLTPRYVAREVKKALPVSYLRVQRYAERNADKLKAIAKLERERGLNTHTLE
Number of Associated Samples 62
Number of Associated Scaffolds 139

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 11.11 %
% of genes near scaffold ends (potentially truncated) 6.47 %
% of genes from short scaffolds (< 2000 bps) 5.76 %
Associated GOLD sequencing projects 52
AlphaFold2 3D model prediction Yes
3D model pTM-score0.40

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (99.281 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(38.130 % of family members)
Environment Ontology (ENVO) Unclassified
(58.993 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(79.137 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 51.25%    β-sheet: 0.00%    Coil/Unstructured: 48.75%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.40
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 139 Family Scaffolds
PF03466LysR_substrate 5.04
PF04226Transgly_assoc 3.60
PF09084NMT1 2.88
PF00536SAM_1 2.88
PF09361Phasin_2 2.16
PF00753Lactamase_B 2.16
PF00005ABC_tran 1.44
PF00583Acetyltransf_1 1.44
PF03401TctC 1.44
PF00126HTH_1 0.72
PF07690MFS_1 0.72
PF04519Bactofilin 0.72
PF13936HTH_38 0.72
PF04126Cyclophil_like 0.72
PF00296Bac_luciferase 0.72
PF00528BPD_transp_1 0.72
PF03237Terminase_6N 0.72
PF01494FAD_binding_3 0.72
PF07045DUF1330 0.72
PF04773FecR 0.72
PF00027cNMP_binding 0.72
PF13545HTH_Crp_2 0.72
PF04632FUSC 0.72
PF06411HdeA 0.72
PF11146DUF2905 0.72

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 139 Family Scaffolds
COG2261Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein familyGeneral function prediction only [R] 3.60
COG0715ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic componentInorganic ion transport and metabolism [P] 2.88
COG4521ABC-type taurine transport system, periplasmic componentInorganic ion transport and metabolism [P] 2.88
COG06542-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductasesEnergy production and conversion [C] 1.44
COG3181Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctCEnergy production and conversion [C] 1.44
COG0578Glycerol-3-phosphate dehydrogenaseEnergy production and conversion [C] 0.72
COG0644Dehydrogenase (flavoprotein)Energy production and conversion [C] 0.72
COG0665Glycine/D-amino acid oxidase (deaminating)Amino acid transport and metabolism [E] 0.72
COG1289Uncharacterized membrane protein YccCFunction unknown [S] 0.72
COG1664Cytoskeletal protein CcmA, bactofilin familyCytoskeleton [Z] 0.72
COG2141Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)Coenzyme transport and metabolism [H] 0.72
COG5470Uncharacterized conserved protein, DUF1330 familyFunction unknown [S] 0.72


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A99.28 %
All OrganismsrootAll Organisms0.72 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300005764|Ga0066903_101916436Not Available1136Open in IMG/M
3300010048|Ga0126373_10348545Not Available1492Open in IMG/M
3300010376|Ga0126381_100189166All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae2742Open in IMG/M
3300010376|Ga0126381_100995524Not Available1209Open in IMG/M
3300010376|Ga0126381_104428147Not Available543Open in IMG/M
3300012948|Ga0126375_11069621Not Available662Open in IMG/M
3300016319|Ga0182033_10313232Not Available1300Open in IMG/M
3300016404|Ga0182037_10767619Not Available829Open in IMG/M
3300026908|Ga0207787_1008607Not Available1066Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil38.13%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil20.86%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil18.70%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil18.70%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland2.88%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil0.72%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000580Forest soil microbial communities from Amazon forest - 2010 replicate II A01EnvironmentalOpen in IMG/M
3300004633Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBioEnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300010048Tropical forest soil microbial communities from Panama - MetaG Plot_11EnvironmentalOpen in IMG/M
3300010358Tropical forest soil microbial communities from Panama - MetaG Plot_3EnvironmentalOpen in IMG/M
3300010359Tropical forest soil microbial communities from Panama - MetaG Plot_15EnvironmentalOpen in IMG/M
3300010360Tropical forest soil microbial communities from Panama - MetaG Plot_6EnvironmentalOpen in IMG/M
3300010361Tropical forest soil microbial communities from Panama - MetaG Plot_23EnvironmentalOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300012948Tropical forest soil microbial communities from Panama - MetaG Plot_14EnvironmentalOpen in IMG/M
3300012971Tropical forest soil microbial communities from Panama - MetaG Plot_1EnvironmentalOpen in IMG/M
3300016270Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080EnvironmentalOpen in IMG/M
3300016294Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178EnvironmentalOpen in IMG/M
3300016319Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00HEnvironmentalOpen in IMG/M
3300016341Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170EnvironmentalOpen in IMG/M
3300016357Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000EnvironmentalOpen in IMG/M
3300016371Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172EnvironmentalOpen in IMG/M
3300016387Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176EnvironmentalOpen in IMG/M
3300016404Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082EnvironmentalOpen in IMG/M
3300016422Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111EnvironmentalOpen in IMG/M
3300016445Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108EnvironmentalOpen in IMG/M
3300017970Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MGEnvironmentalOpen in IMG/M
3300021560Tropical forest soil microbial communities from Panama - MetaG Plot_4EnvironmentalOpen in IMG/M
3300026908Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 77 (SPAdes)EnvironmentalOpen in IMG/M
3300026945Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 55 (SPAdes)EnvironmentalOpen in IMG/M
3300027039Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 14 (SPAdes)EnvironmentalOpen in IMG/M
3300027043Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 11 (SPAdes)EnvironmentalOpen in IMG/M
3300027063Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 37 (SPAdes)EnvironmentalOpen in IMG/M
3300027680Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 80 (SPAdes)EnvironmentalOpen in IMG/M
3300027703Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 81 (SPAdes)EnvironmentalOpen in IMG/M
3300027874Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)EnvironmentalOpen in IMG/M
3300031543Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20EnvironmentalOpen in IMG/M
3300031668Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23EnvironmentalOpen in IMG/M
3300031682Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22EnvironmentalOpen in IMG/M
3300031719Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)EnvironmentalOpen in IMG/M
3300031744Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)EnvironmentalOpen in IMG/M
3300031748Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22EnvironmentalOpen in IMG/M
3300031764Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27EnvironmentalOpen in IMG/M
3300031770Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17EnvironmentalOpen in IMG/M
3300031780Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21EnvironmentalOpen in IMG/M
3300031781Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20EnvironmentalOpen in IMG/M
3300031833Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178EnvironmentalOpen in IMG/M
3300031879Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)EnvironmentalOpen in IMG/M
3300031890Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)EnvironmentalOpen in IMG/M
3300031894Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18EnvironmentalOpen in IMG/M
3300031910Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)EnvironmentalOpen in IMG/M
3300031912Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)EnvironmentalOpen in IMG/M
3300031941Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080EnvironmentalOpen in IMG/M
3300031942Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176EnvironmentalOpen in IMG/M
3300031945Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082EnvironmentalOpen in IMG/M
3300031946Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172EnvironmentalOpen in IMG/M
3300031947Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000HEnvironmentalOpen in IMG/M
3300031954Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)EnvironmentalOpen in IMG/M
3300031959Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24EnvironmentalOpen in IMG/M
3300031981Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25EnvironmentalOpen in IMG/M
3300032035Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170EnvironmentalOpen in IMG/M
3300032051Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26EnvironmentalOpen in IMG/M
3300032054Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23EnvironmentalOpen in IMG/M
3300032059Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27EnvironmentalOpen in IMG/M
3300032076Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)EnvironmentalOpen in IMG/M
3300032261Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
AF_2010_repII_A01DRAFT_106137823300000580Forest SoilMPFTLTLTPQYVAREMKKALPVSFLRVQRYAERNADKLRAIAKLERERGLDTHTLE*
Ga0066395_1065757033300004633Tropical Forest SoilMPFTLTLTPQYVAREIKKALPVSFLRVQRYAERNADKLKSIAKLERERGLNTHTLE*
Ga0066388_10624466313300005332Tropical Forest SoilDPMPFTLTLTPQYVAREMKKKPPVSYLKVQRYAERNADKLKAIAKLERECGLNMHTLE*
Ga0066388_10683529523300005332Tropical Forest SoilVAREIKKPPPVSYLRVQRYAERNADKLKAIAKLERERGLKTHTLE*
Ga0066388_10873062713300005332Tropical Forest SoilLTLTPQYVAREMKKALPVSFLRVQRYAERNADKLRAIAKLERERGLDTHTLE*
Ga0066903_10100323233300005764Tropical Forest SoilMPFTLTLTPQYVAREIKKALPVSFLRVQRYAERNADKLKSIAKLERERGLDTHTLE*
Ga0066903_10191643613300005764Tropical Forest SoilQYVAREVKKAPPVSYLRVQRYAERNADKLKAVAKLERERGLNTHTLE*
Ga0066903_10260909113300005764Tropical Forest SoilPFTLTLTPQYVAREVKKKPPVSYLRVQRYAERNADKLKAIAKLERERGLNTHILE*
Ga0066903_10287232023300005764Tropical Forest SoilVKKKLPVSYLKVQRYAERNADKLKAIAKIERERGINNHTLD*
Ga0066903_10289737913300005764Tropical Forest SoilREIKKALPVSFLRVQRYAERNADKLKSIAKLERERGLNTHILE*
Ga0066903_10418360723300005764Tropical Forest SoilPQYVAREIKKALPVSFLRVQRYAERNADKLKAIAKLERERGLNTHTLE*
Ga0066903_10486912613300005764Tropical Forest SoilTPQYVAREMKKALPVSFLRVQRYAERNADKLRAIAKLERDRGLDTHTLE*
Ga0066903_10518681913300005764Tropical Forest SoilMPFTLTLTPRYVAREVQKALPISYLRVQSYAERNADKLKAIAKLERERGLNTHTLESALKGKREPRAVG*
Ga0066903_10537343213300005764Tropical Forest SoilMPFTLTLTPRYVAREVKKAPPVSYLRVQRYAERNADKLKAIAKLERERGLNTHTLE*
Ga0066903_10696658623300005764Tropical Forest SoilLRHLRYGTGHNDPTPFTLTLAPQYVVREVKKALPVSYLRVQRYAERNADKLKAIAKLERERGSNT
Ga0066903_10847218223300005764Tropical Forest SoilAREVKKKLPVSYLKVQRYAERNADKLKAIAKLERERGLNTHTLE*
Ga0066903_10849902023300005764Tropical Forest SoilGTGHDDPMPFTLTLTPQYVAREVKKKLPVSYLKVQRYAERNADKLKAIAKIERERGINNHILE*
Ga0126373_1001064153300010048Tropical Forest SoilMPFILTLTPQYVAREMKKALPVSFLRVQRYAERNADKLRAIAKLERERGLDTHTLE*
Ga0126373_1034854543300010048Tropical Forest SoilSYLRVQRYAERNADKLKAIAKLEKERGLNTHTLE*
Ga0126373_1108876613300010048Tropical Forest SoilMPFTLTLTPQYVARELKKKLQVSYLKVQRYAERNADKLKAIAKIERERGINNHTLE*
Ga0126373_1117751313300010048Tropical Forest SoilDDPMPFTLTLTPRYVAREVKKALPVSYRRVQRYAERNADKLKAIAKLERERGLNTHTLESALKGKREPRAVG*
Ga0126373_1309639123300010048Tropical Forest SoilVAREVKKKLPVSYLKVQRYAERNADKLKAIAKIERERGINNHTLE*
Ga0126370_1033231823300010358Tropical Forest SoilMPFTLTLTPQYVAREMKKALPVSFLRVQRYAERNADKLRAIAKLERERGLNTHTLE*
Ga0126376_1127848333300010359Tropical Forest SoilPISFLRVQRYAGRNADKLKAIAKFERERGLNMHTLE*
Ga0126372_1217043413300010360Tropical Forest SoilMPFTLTLTPQYVAREMKKKPPVSYLKVQRYAERNADKLKAIAKLERERGLNTHTLE*
Ga0126378_1001074323300010361Tropical Forest SoilMPFTLTMTPQYVAREMKKALPVSFLRVQRYAERNADKLRAIAKLERERGLDTHTLE*
Ga0126378_1075572613300010361Tropical Forest SoilFTLTLTPQYVAREIKKALPVSFLRVQRYAERNADKLKSIAKLERERGLNTHTLE*
Ga0126378_1272796423300010361Tropical Forest SoilMPFTLTLTPQYVAREIKKALPISFLRVQRYAERNADKLKSIAKLERERGLKTHTLE*
Ga0126378_1279876223300010361Tropical Forest SoilMPFTLTLTPQYVAREIKKALPVSFLRVQRYAERNADKLK
Ga0126378_1312418113300010361Tropical Forest SoilGTGHDDPTPFTLTLTPQYVAREVKKAPPVSYLRVQRYAERNADKLKAIAKLERERGLNTHTLE*
Ga0126381_10018916673300010376Tropical Forest SoilSGLRHLRYGTGHDDPTPFTLTLTPQYVAREVKKAPPVSFLRVQRYAERNAEKLKAIAKSERERGLNTQTLE*
Ga0126381_10063128133300010376Tropical Forest SoilLTLTPRYVAREVKKALPVSYLRVQRYAERNADKLKAIAKLERERGLNTHTLE*
Ga0126381_10087894013300010376Tropical Forest SoilMPFTLTLTPQYVAREMKKALPVSFLRVQRYAERNADKLRAIAKLERERG
Ga0126381_10097359613300010376Tropical Forest SoilPQYVAREMKKALPVSFLRVQRYAERNADKLRAIAKLERERGLDTHTLE*
Ga0126381_10099552413300010376Tropical Forest SoilMPFTLTLTPRYVAREVKKALPVSYLRVQRYAERNADKLKAI
Ga0126381_10116885613300010376Tropical Forest SoilQYVAREIKKALPVSFLRVQRYAERNADKLKSIAKLERERGLNTHTLE*
Ga0126381_10442814713300010376Tropical Forest SoilFSGLRHLRYGTGHDDPTPFTLTLTPQYVAREVKKAPPVSYLRVQRYAERNADKLKAIAKLERERGLNTHTLE*
Ga0126381_10458335913300010376Tropical Forest SoilLPVSYLKVQRYAERNADKLKAVAKLERERGLNTHTLE*
Ga0126375_1106962133300012948Tropical Forest SoilMPFTLTLTPQYVAREIKKALPVSFLRVQRYAERNADKLKSIAKLER
Ga0126369_1013871943300012971Tropical Forest SoilLRYGTGHDDPMPFTLTLTPQYVAREIKKALPVSFLRVQRYAERNADKLKSIAKLERERGLNTHTLE*
Ga0126369_1091569033300012971Tropical Forest SoilMPFTLTLTPQYVAREVKKKPPVSYLRVQRYAERNADMLKAIAKLERERGLNTHTLE*
Ga0126369_1166425223300012971Tropical Forest SoilSGLRHLRYGTGHDDPTPFTLTLTPQCVAREVKKAPPVSFLRVQRYAERNAEKLKAIAKSERERGLNTQTLE*
Ga0182036_1081323223300016270SoilALPVSYLKVQRYAERNADKLKAVAKLERERGLNTHTLE
Ga0182041_1004594673300016294SoilGLRHLRYGTGHDDLMPFTLSLTPQYVARELKKKLPVSYLRVQRYPERNADKLKAIAKIERERGINKHTLE
Ga0182041_1156356523300016294SoilMPFTLTLTPQYVAREIKKALPVSFLRVQRYAERNADKLKSIAMLERERGLNTHTLE
Ga0182033_1022419913300016319SoilKALPVSFLRVQRYAERNADKLKSIAKLERERGLNTHTLE
Ga0182033_1031323213300016319SoilAREVKKALPVSYLRVQRYAERNADKLKAIAKLERERGLNTHTLE
Ga0182033_1106313413300016319SoilPQYVAREIKKALPISFLRVQRYAERNADKLKAIAKLERERGFNTHTLK
Ga0182035_1004679513300016341SoilLRYGTGRDDPMPFTLTLTPQYVAREAKKKLPVSYLRVQRHAERNADKLKAIAKIERERGINKHTLE
Ga0182035_1087085213300016341SoilTLTLTPQYVAREVKKKLPVSYLKVQRYAERNADKLKAKAKLERERGLSTHTLE
Ga0182035_1217221813300016341SoilLRYGNGHDDPIPFTLTLTPQYVAREIKRTLPVSYLKVQRYAERNADKLKAIAKSEKERGSKRHTLE
Ga0182032_1058888113300016357SoilKKAPPVSYLRVQRYAERNADKLKAIAKLERERGLKTLTLE
Ga0182032_1117216323300016357SoilLRHLRYGTGHDDPMPFILTLTPQYVAREMRKTPLISYLKIHRYAERNADRLKAIAKLEKGRGFNTRP
Ga0182034_1071911723300016371SoilQKKLPVSYLKVQRYAERNADKLKAKAWFEKERGFNTHTLE
Ga0182040_1011262713300016387SoilTLTLTPQYVAREVKKAPPVSYLRIQRYAERNADKLKAIAKLERERGLKSSLSNSQ
Ga0182040_1023928713300016387SoilKKPPVSYLRVQRYAERNADKLKAIAKLERERGFNTHTLK
Ga0182040_1036770223300016387SoilPVSYLKVQRYAERNADKLKAKAKLEKERGLNTHTLE
Ga0182040_1144615713300016387SoilMPFTLTLTPQYVACEIKKALPVSYLRVQRYAERNADKLKAIAKLEREHGLNTHTLE
Ga0182040_1182967223300016387SoilTPQYVAREVKKAPPVSYLRVQRYAERNADKLKAIAKLERERGLKTLTLE
Ga0182037_1067586313300016404SoilKKALPVSFLRVQGYAERNADKLRAIAKLERERGLDTHTLE
Ga0182037_1076761923300016404SoilFSGLRHLRYGTGHDDPTPFTLTLTPQYVAREVKKKPPVSYLRVQRYAERNADKLKAIAKLERERGLNTHTLE
Ga0182037_1120241213300016404SoilGQDDPMPFTLTLTPQYVAREVKKAPPVSYLRVQRYAERNADKLKAIAKLERERGLNTHTL
Ga0182037_1122554313300016404SoilFTLTLTPQYVAREIKKALPVSFLRVQRYAERNADKLKSIAKLERERGLNTHTLE
Ga0182037_1134452723300016404SoilMPFTLPLTPQYVAREMKKKPPVSYLRVQRYAERNADKLKAIAKLERERGLNTHTLE
Ga0182039_1004804013300016422SoilDPMPFTLTLTPQYVAREVKKKLPVSYLRVQRYAERNADKLKAIAKIERERGINKHTLE
Ga0182039_1013410843300016422SoilKKAPPVSYLKVQRYAERNADKLKAKAKFEKERGLNTHTLE
Ga0182039_1015819243300016422SoilPFILTLTPQYVAREMRKTPLISYLKIHRYAERNADRLKAIAKLEKGRGFNTRP
Ga0182039_1074964213300016422SoilLPVSYLRVQRYAERNADKLKAIAKLERERGSNTHTLE
Ga0182038_1037738823300016445SoilMPFTLTLTPQYVAREVKKAPPVSYLRVQRKAERNGDKLKTIAKLERERGLNTHTLE
Ga0187783_1012625313300017970Tropical PeatlandVSYLKVQRYAERNADKLKAIAKSEKERGSKRHTLE
Ga0187783_1062538813300017970Tropical PeatlandLTLTPQYVAREIRKTLPVSYLKVQRYAQRNADKLKAIAKFEKERGVNAHSLQ
Ga0187783_1099238413300017970Tropical PeatlandYVAREIRKTLPVSYLKVQRYAKRNADKLKAIAKLKKERGVNAHTLQ
Ga0187783_1101784813300017970Tropical PeatlandPFTLTLTPQYVAREIRKTLPVSYLKVQRYAKRNADKLKAIAKLEKERGVNAHTLQ
Ga0126371_1271941513300021560Tropical Forest SoilPMPFTLTLTPQYVAREVKKKPPVSYLRVQRYAERNADKLKAIAKLERERGLNTHTLE
Ga0207787_100860733300026908Tropical Forest SoilFSGLRHLRYGTGHDDPMRFTLTLTPQYVAREMKKKPPVSYLRVQRYAERNADKLKAIAKLERERGLNTHTLE
Ga0207743_102808123300026945Tropical Forest SoilSGLRHLRYGTGHDDPMRFTLTLTPQYVAREMKKKPPVSYLRVQRYAERNADKLKAIAKLERERGINKHTLE
Ga0207855_102299013300027039Tropical Forest SoilPVPYRRWRKPPQYVAREIQKKLPVSYLKVQRYAEQNADKLKAKAKFEKEHGVNTHTLE
Ga0207800_103036323300027043Tropical Forest SoilLTLTPQYVAREIKKTLPVSYLKVQRYAERNADKLKAIAKLERERGLNTHTLE
Ga0207762_103465513300027063Tropical Forest SoilLTLTPQYVAREIRKTLPVSYLKVQRYAQRNADKLKAIAKFEKERGVNAHTLQ
Ga0207826_109966623300027680Tropical Forest SoilVAREVKKALPVSYLRVQRYAERNADKLKAIAKLERERGLNTHTLE
Ga0207826_116239013300027680Tropical Forest SoilYGTGHDDPMPFTLTLTPQYVAREVKKKLPVSYLKVQRYAERNADKLKAIAKLERERGLNTHTLE
Ga0207862_102334343300027703Tropical Forest SoilAREIKRALPVSYLKVQRYAEQNADKLKAIAKFGKKRGLNAHTLQ
Ga0207862_115420813300027703Tropical Forest SoilRYGTGHDNPMPFTLTLTPQYVAREVKKALPVSYLRVQRYAERNADRLKAIAKLEGERGLNTHTLE
Ga0209465_1042527523300027874Tropical Forest SoilKKALPVSYLRVQRYAERNADKLKAIAKLEKERGLNTHTLE
Ga0318516_1058709823300031543SoilYVAREIKKALPVSFLRVQRYAERNADKLKSIAMLERERGLNTHTLE
Ga0318542_1031136123300031668SoilTLTPQYVAREVKKKLPVSYLRVQRYAERNADKLKAIAKIERERGINNHTLE
Ga0318560_1078000413300031682SoilLRHLRYGTGQDDPTPFTLTLTPQYVAREIQKKLPVSYLKVQRYAERNADKLKAKAKLERERGVNAHTLQ
Ga0306917_1075939213300031719SoilPVSYLKVQRYAERNADKLKAIAKFERERGLNTHTLE
Ga0306917_1088164913300031719SoilTLTLTPQYVAREMKKKPPVSYLKVQRYAERNADKLKAKAKLERERGLSTHTLE
Ga0306917_1088409723300031719SoilMPFILTLTPQYVAREMRKTPLISYLKIHRYAERNADRLKAIAKLEKGRGFNTRP
Ga0306918_1002317513300031744SoilLPVSYLRVQRYAERNADKLKAIAKLERERGINKHTLE
Ga0318492_1079617913300031748SoilHDDPMPFTLTLTPRYVAREVKKALPVSYLRVQRYAERNAEKLKVIAKLERERGLNTYTLE
Ga0318535_1025082213300031764SoilVAREIKKAPPVSYLKVQRYAERNADKLKAKAKFEKERGLNTHTLE
Ga0318521_1101691913300031770SoilTPQYVARKIQKKLPVSYLKVQRYAERNADKLKAKAKLEKEHGLNTHTLE
Ga0318508_112847323300031780SoilTLTPQDVAREIKKALPVSFLRVQRYAERNADKLKSIAMLERERGLNTHTLE
Ga0318547_1022356233300031781SoilGRDDPMPFTLTLTPQYVAREVKKKLPVSYLRVQRYAERNADKLKAIAKIERERGINKHTL
Ga0310917_1026674943300031833SoilVSYLKVKRYAERNADKLKAKAKFEKERGLNTHTLA
Ga0306919_1023012533300031879SoilSKRLPVSYLKVQRYAERNADKLKAIAKFEGERGLNTHTLE
Ga0306919_1033221313300031879SoilTLTPQYVACEIKKALPVSFLRVQRYAERNADKLKSIAMLERERGLNTHTLE
Ga0306919_1122125413300031879SoilPVSYLRVQRYAERNADKLKAIAKLERERGLNTHTLE
Ga0306919_1146629213300031879SoilYGTGHDDPTPFTLTLTPQYVAREVKKAPPVSYLRVQRYAERSADKLKAIAKLERERGLNTHTLE
Ga0306925_1005376733300031890SoilMPFTLTLTPQYVAREVKKAPPVSYLRVQRYAERNADKLKAIAKLERERGLNTHTLE
Ga0306925_1022868413300031890SoilREVKKALPVSYLRVQRYAQRNADKLKAIAKLERERGLNTHTLE
Ga0306925_1078221523300031890SoilVAREIKKALSVSYLKVQRYAERNADKLKAKAKFEKECGFNTHTLE
Ga0306925_1158195213300031890SoilQYVAREIQKKLPVSYLKVQRYAERNADKLKAKAWFEKERGFNTHTLE
Ga0306925_1173193713300031890SoilMPFTLTLTPQYVAREIKKKLPVSYLKVQRYAERNADKLKAIAKLERERGLNTRTLE
Ga0306925_1226459413300031890SoilAREIKKALPVSYLRVQRYAERNADKLKAIAKLERERGLNTHTLE
Ga0318522_1023636113300031894SoilDDPMPFTLTLTPQYVAREVKKALPVSYLRVQRYAERNADKLKAIAKLERERGLNTHTLE
Ga0306923_1069732213300031910SoilREIQKKLPVSYLKVQRYAERNADKLKATAKLEKERGLNTHTLE
Ga0306921_1024003953300031912SoilREIRKTLPVSYLKVQRYAKRNADKLKAIAKFERERGVSAHTLQ
Ga0306921_1024580043300031912SoilRHSTSHAKSKKPPVSYLRVQRYAERNADKLKAIAKLERERGLNTHTLE
Ga0306921_1178872923300031912SoilHSTWHAKSKRLPVSYLKVQRYAERNADKLKAIAKFEGERGLNTHTLE
Ga0306921_1194762523300031912SoilRYGTGHDDPMPFTLTLTPRFVAREVKKALPVSYLRVQRYAERNADKLKAIAKLERERGLKTTPSNSYE
Ga0310912_1020414133300031941SoilDPTPFTLTLTPQYVAREVKKAPPVSYLRIQRYAERNADKLKAIAKLERERGLKSSLSNSQ
Ga0310912_1139319513300031941SoilTLTLTPQYVAREMKKKPPVSYLRVQRYAERNADKLKAIAKLERERGLNTHTLE
Ga0310912_1152489323300031941SoilLTLTPQYVAREVKKKLPVSYLKVQRYAERNADKLKAIAKIERERGINNHTLE
Ga0310916_1040749423300031942SoilLPVSYLKVQRYAERNADKLKAIAKIERERGINNHTLE
Ga0310916_1146938513300031942SoilMLTPQYVAREVKKALPVSYLRVQRYAQRNADKLKAIAKLERERGLNTHTLE
Ga0310913_1019933113300031945SoilVKKAPPVSFLRVQRYAERNADKLKAIAKLERERGLNKHTLE
Ga0310913_1062964423300031945SoilTLTPQYVAREVKKKPPVSYLRVQRYAERNADKLKAIAKLERERGLNTHTLE
Ga0310913_1128138223300031945SoilYVAREIRKTLPVSYLKVQRYAKRNADKLKAIAKFERERGVSAHTLQ
Ga0310910_1005241713300031946SoilTGRDDPMPFTLTLTPQYVAREVKKILPVSYLRVQRYAERNADKLKAIAKIERERGINKHTLE
Ga0310910_1134653213300031946SoilQKLAVSYLKVQRYAERNADKLKAKAKLEKERGLNTHTLE
Ga0310909_1004784613300031947SoilVSYLRVQRYPERNADKLKAIAKIERERGINKHTLE
Ga0310909_1037193633300031947SoilMPFTLTLTPQYVAREIRKTLPVSYLKVQRYAERNADNLKAIAKFGKKRGLNAHTLQ
Ga0306926_1056567433300031954SoilPQYVAREVKKKPPVSYLRVQRYAERNADKLKAIAKLERERGLNTHTLE
Ga0306926_1071491913300031954SoilYVAREVKKALPVSYLKVQRYAERNADKLKAKAKFERERGYNTHTLE
Ga0318530_1005316513300031959SoilFSGLRHLRYGTGQDDPMPFTLTLTPQYVAREVKKAPPVSYLRVQRYAERNADKLKAIAKLERERGLKSSLSNSQ
Ga0318531_1013737223300031981SoilTPQYVAREIQQKLPVSYLKVQRYAERNADKLKAKAKLEKERGLNTHTLE
Ga0310911_1004257913300032035SoilKLPVSYLRVQRYAERNADKLKAIAKIERERGINKHTLE
Ga0318532_1030960323300032051SoilYVAREVKKKLPVSYLRVQRYAERNADKLKAIAKLERERGINKHTLE
Ga0318570_1039106223300032054SoilDDPTPFTLTLTPQYVAREVKKASPPVSYLRVQRYAERNADKLKAIAKLERERGLKTTPSNSYE
Ga0318533_1031305513300032059SoilLTPQYVAREIQKKLPVSYLKVQRYAERNADKLKAKAKLEKEHGLNTHTLE
Ga0318533_1050611013300032059SoilVSYLKVQRYAERNADKLKAKAKLERERGLSTHTLE
Ga0306924_1042723513300032076SoilKLPVSYLKVQRYAERNADKLKAKAKLEKERGLNTHTLE
Ga0306924_1074269733300032076SoilDPMPFILTLTPQYVAREMRKTPLISYLKIHRYAERNADRLKAIAKLEKGRGFNTRP
Ga0306920_10070644213300032261SoilMPFTLTLTPQYVAREIKKALSVSYLRVQRYAERNADKLKAARKRAWV
Ga0306920_10192858813300032261SoilPVSYLKVQRYAERNADKLEAIAKLERERGLNTHTLE
Ga0306920_10301424423300032261SoilKKLPVSYLKVQRYAERNADKLKAIAKFERERGLNTHTLE


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.