NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F054391

Metagenome Family F054391

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F054391
Family Type Metagenome
Number of Sequences 140
Average Sequence Length 38 residues
Representative Sequence GGSLSDIETTVAMTAKDAHATFESAGKAAKNFRSAGRS
Number of Associated Samples 105
Number of Associated Scaffolds 140

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 2.14 %
% of genes near scaffold ends (potentially truncated) 95.00 %
% of genes from short scaffolds (< 2000 bps) 92.14 %
Associated GOLD sequencing projects 100
AlphaFold2 3D model prediction Yes
3D model pTM-score0.48

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (67.857 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(22.143 % of family members)
Environment Ontology (ENVO) Unclassified
(41.429 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(55.714 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 39.39%    β-sheet: 0.00%    Coil/Unstructured: 60.61%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.48
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 140 Family Scaffolds
PF04392ABC_sub_bind 5.00
PF03992ABM 3.57
PF00072Response_reg 2.86
PF10262Rdx 2.86
PF03401TctC 2.14
PF00106adh_short 1.43
PF01066CDP-OH_P_transf 1.43
PF07719TPR_2 1.43
PF14026DUF4242 1.43
PF14559TPR_19 0.71
PF02581TMP-TENI 0.71
PF01183Glyco_hydro_25 0.71
PF03951Gln-synt_N 0.71
PF06689zf-C4_ClpX 0.71
PF07769PsiF_repeat 0.71
PF02518HATPase_c 0.71
PF13417GST_N_3 0.71
PF00933Glyco_hydro_3 0.71
PF00590TP_methylase 0.71
PF13505OMP_b-brl 0.71
PF08734GYD 0.71
PF13442Cytochrome_CBB3 0.71
PF02894GFO_IDH_MocA_C 0.71
PF01527HTH_Tnp_1 0.71
PF01370Epimerase 0.71
PF00536SAM_1 0.71
PF04430DUF498 0.71
PF13356Arm-DNA-bind_3 0.71
PF08811DUF1800 0.71
PF05532CsbD 0.71
PF02582DUF155 0.71
PF03795YCII 0.71
PF09694Gcw_chp 0.71
PF03703bPH_2 0.71
PF05305DUF732 0.71
PF02566OsmC 0.71
PF05598DUF772 0.71
PF06147DUF968 0.71
PF12625Arabinose_bd 0.71
PF13699DUF4157 0.71
PF01243Putative_PNPOx 0.71
PF00027cNMP_binding 0.71
PF13180PDZ_2 0.71

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 140 Family Scaffolds
COG2984ABC-type uncharacterized transport system, periplasmic componentGeneral function prediction only [R] 5.00
COG3181Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctCEnergy production and conversion [C] 2.14
COG0558Phosphatidylglycerophosphate synthaseLipid transport and metabolism [I] 1.43
COG5050sn-1,2-diacylglycerol ethanolamine- and cholinephosphotranferasesLipid transport and metabolism [I] 1.43
COG1183Phosphatidylserine synthaseLipid transport and metabolism [I] 1.43
COG2350YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHisSecondary metabolites biosynthesis, transport and catabolism [Q] 0.71
COG5267Uncharacterized conserved protein, DUF1800 familyFunction unknown [S] 0.71
COG4274Uncharacterized conserved protein, contains GYD domainFunction unknown [S] 0.71
COG3757Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 familyCell wall/membrane/envelope biogenesis [M] 0.71
COG3737Uncharacterized protein, contains Mth938-like domainFunction unknown [S] 0.71
COG3428Uncharacterized membrane protein YdbT, contains bPH2 (bacterial pleckstrin homology) domainFunction unknown [S] 0.71
COG3402Uncharacterized membrane protein YdbS, contains bPH2 (bacterial pleckstrin homology) domainFunction unknown [S] 0.71
COG3237Uncharacterized conserved protein YjbJ, UPF0337 familyFunction unknown [S] 0.71
COG0174Glutamine synthetaseAmino acid transport and metabolism [E] 0.71
COG1765Uncharacterized OsmC-related proteinGeneral function prediction only [R] 0.71
COG1764Organic hydroperoxide reductase OsmC/OhrADefense mechanisms [V] 0.71
COG1723Mitochondrial translation protein, Rmd1/RMND1/DUF155 familyTranslation, ribosomal structure and biogenesis [J] 0.71
COG1504Uncharacterized conserved protein, DUF498 domainFunction unknown [S] 0.71
COG1472Periplasmic beta-glucosidase and related glycosidasesCarbohydrate transport and metabolism [G] 0.71
COG0673Predicted dehydrogenaseGeneral function prediction only [R] 0.71
COG0352Thiamine monophosphate synthaseCoenzyme transport and metabolism [H] 0.71


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms67.86 %
UnclassifiedrootN/A32.14 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000580|AF_2010_repII_A01DRAFT_1051881All Organisms → cellular organisms → Bacteria → Proteobacteria630Open in IMG/M
3300000675|JGI12335J11872_100790All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales635Open in IMG/M
3300000721|JGI12410J11868_103111All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria620Open in IMG/M
3300000893|AP72_2010_repI_A001DRAFT_1036615All Organisms → cellular organisms → Bacteria770Open in IMG/M
3300000955|JGI1027J12803_103866733Not Available561Open in IMG/M
3300004633|Ga0066395_10206003All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1032Open in IMG/M
3300005332|Ga0066388_106649599Not Available582Open in IMG/M
3300005457|Ga0070662_100010949Not Available5976Open in IMG/M
3300005471|Ga0070698_100141030All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2361Open in IMG/M
3300005764|Ga0066903_101022818All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1513Open in IMG/M
3300005764|Ga0066903_101389165All Organisms → cellular organisms → Bacteria1318Open in IMG/M
3300005764|Ga0066903_107603670Not Available558Open in IMG/M
3300005764|Ga0066903_107700642All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria554Open in IMG/M
3300006028|Ga0070717_10488222All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1112Open in IMG/M
3300006032|Ga0066696_10418026All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium876Open in IMG/M
3300006058|Ga0075432_10217918All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae762Open in IMG/M
3300006163|Ga0070715_10096168All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1373Open in IMG/M
3300006806|Ga0079220_10109536Not Available1449Open in IMG/M
3300006845|Ga0075421_100168884All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2727Open in IMG/M
3300006871|Ga0075434_100432322Not Available1337Open in IMG/M
3300009137|Ga0066709_101918612All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria824Open in IMG/M
3300009147|Ga0114129_10496076All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1595Open in IMG/M
3300009147|Ga0114129_11892319All Organisms → cellular organisms → Bacteria724Open in IMG/M
3300009147|Ga0114129_13482442All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium504Open in IMG/M
3300009521|Ga0116222_1329359Not Available661Open in IMG/M
3300009545|Ga0105237_10646341All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae1064Open in IMG/M
3300010047|Ga0126382_10901839Not Available765Open in IMG/M
3300010048|Ga0126373_11786130All Organisms → cellular organisms → Bacteria678Open in IMG/M
3300010301|Ga0134070_10196108All Organisms → cellular organisms → Bacteria739Open in IMG/M
3300010358|Ga0126370_10292933All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1286Open in IMG/M
3300010359|Ga0126376_10110172All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2121Open in IMG/M
3300010361|Ga0126378_11040215All Organisms → cellular organisms → Bacteria → Proteobacteria921Open in IMG/M
3300010361|Ga0126378_11858222Not Available685Open in IMG/M
3300010362|Ga0126377_10250056All Organisms → cellular organisms → Bacteria → Proteobacteria1725Open in IMG/M
3300010362|Ga0126377_12614932Not Available580Open in IMG/M
3300010366|Ga0126379_11681595All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium739Open in IMG/M
3300010366|Ga0126379_13115502Not Available555Open in IMG/M
3300010366|Ga0126379_13694634All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae513Open in IMG/M
3300010376|Ga0126381_104627704All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis530Open in IMG/M
3300010398|Ga0126383_10953244Not Available945Open in IMG/M
3300010398|Ga0126383_12732410All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria576Open in IMG/M
3300011119|Ga0105246_11787101All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium YIM 77505587Open in IMG/M
3300012198|Ga0137364_10449863All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales966Open in IMG/M
3300012200|Ga0137382_10223720All Organisms → cellular organisms → Bacteria1298Open in IMG/M
3300012960|Ga0164301_11685905Not Available529Open in IMG/M
3300012971|Ga0126369_10553621All Organisms → cellular organisms → Bacteria → Proteobacteria1215Open in IMG/M
3300012971|Ga0126369_13230401Not Available534Open in IMG/M
3300012984|Ga0164309_11006862Not Available687Open in IMG/M
3300013297|Ga0157378_10665915All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1058Open in IMG/M
3300015371|Ga0132258_13618930All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1056Open in IMG/M
3300016270|Ga0182036_10341961All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1151Open in IMG/M
3300016270|Ga0182036_11767910Not Available523Open in IMG/M
3300016294|Ga0182041_10144350All Organisms → cellular organisms → Bacteria1826Open in IMG/M
3300016294|Ga0182041_11635840Not Available595Open in IMG/M
3300016341|Ga0182035_10966842All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium753Open in IMG/M
3300016341|Ga0182035_11526889All Organisms → cellular organisms → Bacteria → Proteobacteria601Open in IMG/M
3300016371|Ga0182034_10569692Not Available952Open in IMG/M
3300016371|Ga0182034_10579143All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium945Open in IMG/M
3300016404|Ga0182037_10343176All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1214Open in IMG/M
3300016422|Ga0182039_11038795Not Available736Open in IMG/M
3300016445|Ga0182038_10150219All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1777Open in IMG/M
3300016445|Ga0182038_11169266All Organisms → cellular organisms → Bacteria → Proteobacteria685Open in IMG/M
3300018007|Ga0187805_10635385Not Available506Open in IMG/M
3300018060|Ga0187765_10365161Not Available883Open in IMG/M
3300018072|Ga0184635_10066691All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1403Open in IMG/M
3300018072|Ga0184635_10228828All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria738Open in IMG/M
3300018476|Ga0190274_12866082All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Boseaceae → Bosea → unclassified Bosea → Bosea sp. LC85578Open in IMG/M
3300021078|Ga0210381_10017412Not Available1858Open in IMG/M
3300021405|Ga0210387_10814820Not Available824Open in IMG/M
3300022534|Ga0224452_1225808All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria574Open in IMG/M
3300022756|Ga0222622_10461090Not Available903Open in IMG/M
3300023072|Ga0247799_1096356All Organisms → cellular organisms → Bacteria529Open in IMG/M
3300025915|Ga0207693_10297874Not Available1263Open in IMG/M
3300025949|Ga0207667_10381925All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1435Open in IMG/M
3300026121|Ga0207683_11047856Not Available757Open in IMG/M
3300026824|Ga0207723_102099All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1742Open in IMG/M
3300026859|Ga0207859_1002786All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → Rhodoplanes roseus1679Open in IMG/M
3300027049|Ga0207806_1026103All Organisms → cellular organisms → Bacteria673Open in IMG/M
3300027654|Ga0209799_1001146All Organisms → cellular organisms → Bacteria5126Open in IMG/M
3300027703|Ga0207862_1159963Not Available673Open in IMG/M
3300027725|Ga0209178_1150277Not Available804Open in IMG/M
3300027915|Ga0209069_10436681All Organisms → cellular organisms → Bacteria → Proteobacteria725Open in IMG/M
3300028380|Ga0268265_10679546All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria992Open in IMG/M
3300028715|Ga0307313_10177458Not Available660Open in IMG/M
3300028828|Ga0307312_10872633Not Available596Open in IMG/M
3300028878|Ga0307278_10251036All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria785Open in IMG/M
3300031226|Ga0307497_10028325All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae1803Open in IMG/M
3300031474|Ga0170818_108949055Not Available503Open in IMG/M
3300031543|Ga0318516_10087623All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1744Open in IMG/M
3300031564|Ga0318573_10669532All Organisms → cellular organisms → Bacteria → Proteobacteria558Open in IMG/M
3300031572|Ga0318515_10291637All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria875Open in IMG/M
3300031573|Ga0310915_11270606Not Available508Open in IMG/M
3300031719|Ga0306917_10061139All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium2574Open in IMG/M
3300031719|Ga0306917_11313346All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium559Open in IMG/M
3300031720|Ga0307469_10371519All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodomicrobium1209Open in IMG/M
3300031736|Ga0318501_10331638All Organisms → cellular organisms → Bacteria815Open in IMG/M
3300031744|Ga0306918_10286608All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1265Open in IMG/M
3300031744|Ga0306918_10303165All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1231Open in IMG/M
3300031751|Ga0318494_10939310Not Available508Open in IMG/M
3300031753|Ga0307477_10403097All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium937Open in IMG/M
3300031763|Ga0318537_10198480All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria747Open in IMG/M
3300031771|Ga0318546_10337916All Organisms → cellular organisms → Bacteria1046Open in IMG/M
3300031771|Ga0318546_10477088All Organisms → cellular organisms → Bacteria874Open in IMG/M
3300031771|Ga0318546_10837141All Organisms → cellular organisms → Bacteria648Open in IMG/M
3300031771|Ga0318546_10854384All Organisms → cellular organisms → Bacteria640Open in IMG/M
3300031792|Ga0318529_10017993All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2773Open in IMG/M
3300031833|Ga0310917_10905042All Organisms → cellular organisms → Bacteria → Proteobacteria593Open in IMG/M
3300031835|Ga0318517_10120586Not Available1160Open in IMG/M
3300031890|Ga0306925_10088476All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium3285Open in IMG/M
3300031890|Ga0306925_10357662All Organisms → cellular organisms → Bacteria → Proteobacteria1568Open in IMG/M
3300031912|Ga0306921_10531306All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1365Open in IMG/M
3300031912|Ga0306921_10626821All Organisms → cellular organisms → Bacteria → Proteobacteria1241Open in IMG/M
3300031941|Ga0310912_10135246All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1848Open in IMG/M
3300031944|Ga0310884_10158983Not Available1173Open in IMG/M
3300031945|Ga0310913_10263192Not Available1213Open in IMG/M
3300031945|Ga0310913_10825429All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria653Open in IMG/M
3300031946|Ga0310910_10409538All Organisms → cellular organisms → Bacteria → Proteobacteria1074Open in IMG/M
3300031946|Ga0310910_10830102All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium727Open in IMG/M
3300031946|Ga0310910_10916587Not Available687Open in IMG/M
3300031946|Ga0310910_11165985All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium598Open in IMG/M
3300031947|Ga0310909_11611393Not Available514Open in IMG/M
3300031954|Ga0306926_10445492Not Available1595Open in IMG/M
3300031954|Ga0306926_12752990All Organisms → cellular organisms → Bacteria → Proteobacteria532Open in IMG/M
3300031981|Ga0318531_10008404All Organisms → cellular organisms → Bacteria → Proteobacteria3769Open in IMG/M
3300032001|Ga0306922_11751115Not Available613Open in IMG/M
3300032013|Ga0310906_11209345All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales550Open in IMG/M
3300032052|Ga0318506_10267469Not Available758Open in IMG/M
3300032059|Ga0318533_10507364All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria884Open in IMG/M
3300032063|Ga0318504_10651657All Organisms → cellular organisms → Bacteria → Proteobacteria506Open in IMG/M
3300032076|Ga0306924_10607788All Organisms → cellular organisms → Bacteria → Proteobacteria1236Open in IMG/M
3300032076|Ga0306924_10822842All Organisms → cellular organisms → Bacteria1033Open in IMG/M
3300032076|Ga0306924_11102082Not Available865Open in IMG/M
3300032076|Ga0306924_11276450All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria790Open in IMG/M
3300032160|Ga0311301_10057740All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium8596Open in IMG/M
3300032261|Ga0306920_100368512All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2136Open in IMG/M
3300032261|Ga0306920_101276742Not Available1057Open in IMG/M
3300032261|Ga0306920_101409205All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales998Open in IMG/M
3300032261|Ga0306920_104226179All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria517Open in IMG/M
3300033289|Ga0310914_11785130Not Available519Open in IMG/M
3300033433|Ga0326726_11745437Not Available606Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil22.14%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil20.00%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil11.43%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil9.29%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil5.00%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere4.29%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere2.86%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil2.14%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment1.43%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment1.43%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil1.43%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil1.43%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil1.43%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil1.43%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil1.43%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil1.43%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment0.71%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment0.71%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds0.71%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil0.71%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.71%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil0.71%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland0.71%
Peat SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil0.71%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.71%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere0.71%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.71%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere0.71%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.71%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.71%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.71%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere0.71%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000580Forest soil microbial communities from Amazon forest - 2010 replicate II A01EnvironmentalOpen in IMG/M
3300000675Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 54EnvironmentalOpen in IMG/M
3300000721Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 41EnvironmentalOpen in IMG/M
3300000893Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A001EnvironmentalOpen in IMG/M
3300000955Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300004633Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBioEnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005457Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaGHost-AssociatedOpen in IMG/M
3300005471Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaGEnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300006028Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaGEnvironmentalOpen in IMG/M
3300006032Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145EnvironmentalOpen in IMG/M
3300006058Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1Host-AssociatedOpen in IMG/M
3300006163Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaGEnvironmentalOpen in IMG/M
3300006806Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100EnvironmentalOpen in IMG/M
3300006845Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5Host-AssociatedOpen in IMG/M
3300006871Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3Host-AssociatedOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009521Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaGEnvironmentalOpen in IMG/M
3300009545Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaGHost-AssociatedOpen in IMG/M
3300010047Tropical forest soil microbial communities from Panama - MetaG Plot_30EnvironmentalOpen in IMG/M
3300010048Tropical forest soil microbial communities from Panama - MetaG Plot_11EnvironmentalOpen in IMG/M
3300010301Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015EnvironmentalOpen in IMG/M
3300010358Tropical forest soil microbial communities from Panama - MetaG Plot_3EnvironmentalOpen in IMG/M
3300010359Tropical forest soil microbial communities from Panama - MetaG Plot_15EnvironmentalOpen in IMG/M
3300010361Tropical forest soil microbial communities from Panama - MetaG Plot_23EnvironmentalOpen in IMG/M
3300010362Tropical forest soil microbial communities from Panama - MetaG Plot_22EnvironmentalOpen in IMG/M
3300010366Tropical forest soil microbial communities from Panama - MetaG Plot_24EnvironmentalOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300010398Tropical forest soil microbial communities from Panama - MetaG Plot_35EnvironmentalOpen in IMG/M
3300011119Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaGHost-AssociatedOpen in IMG/M
3300012198Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012200Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012960Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MGEnvironmentalOpen in IMG/M
3300012971Tropical forest soil microbial communities from Panama - MetaG Plot_1EnvironmentalOpen in IMG/M
3300012984Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MGEnvironmentalOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300016270Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080EnvironmentalOpen in IMG/M
3300016294Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178EnvironmentalOpen in IMG/M
3300016341Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170EnvironmentalOpen in IMG/M
3300016371Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172EnvironmentalOpen in IMG/M
3300016404Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082EnvironmentalOpen in IMG/M
3300016422Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111EnvironmentalOpen in IMG/M
3300016445Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108EnvironmentalOpen in IMG/M
3300018007Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5EnvironmentalOpen in IMG/M
3300018060Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MGEnvironmentalOpen in IMG/M
3300018072Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2EnvironmentalOpen in IMG/M
3300018476Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 TEnvironmentalOpen in IMG/M
3300021078Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redoEnvironmentalOpen in IMG/M
3300021405Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-OEnvironmentalOpen in IMG/M
3300022534Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1EnvironmentalOpen in IMG/M
3300022756Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1EnvironmentalOpen in IMG/M
3300023072Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S151-409C-6EnvironmentalOpen in IMG/M
3300025915Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025949Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026121Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026824Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 27 (SPAdes)EnvironmentalOpen in IMG/M
3300026859Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 25 (SPAdes)EnvironmentalOpen in IMG/M
3300027049Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 72 (SPAdes)EnvironmentalOpen in IMG/M
3300027654Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio (SPAdes)EnvironmentalOpen in IMG/M
3300027703Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 81 (SPAdes)EnvironmentalOpen in IMG/M
3300027725Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)EnvironmentalOpen in IMG/M
3300027915Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)EnvironmentalOpen in IMG/M
3300028380Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028715Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_203EnvironmentalOpen in IMG/M
3300028828Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202EnvironmentalOpen in IMG/M
3300028878Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117EnvironmentalOpen in IMG/M
3300031226Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_SEnvironmentalOpen in IMG/M
3300031474Fir Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031543Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20EnvironmentalOpen in IMG/M
3300031564Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21EnvironmentalOpen in IMG/M
3300031572Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19EnvironmentalOpen in IMG/M
3300031573Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111EnvironmentalOpen in IMG/M
3300031719Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)EnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031736Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21EnvironmentalOpen in IMG/M
3300031744Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)EnvironmentalOpen in IMG/M
3300031751Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24EnvironmentalOpen in IMG/M
3300031753Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515EnvironmentalOpen in IMG/M
3300031763Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29EnvironmentalOpen in IMG/M
3300031771Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19EnvironmentalOpen in IMG/M
3300031792Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23EnvironmentalOpen in IMG/M
3300031833Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178EnvironmentalOpen in IMG/M
3300031835Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21EnvironmentalOpen in IMG/M
3300031890Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)EnvironmentalOpen in IMG/M
3300031912Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)EnvironmentalOpen in IMG/M
3300031941Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080EnvironmentalOpen in IMG/M
3300031944Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1EnvironmentalOpen in IMG/M
3300031945Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082EnvironmentalOpen in IMG/M
3300031946Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172EnvironmentalOpen in IMG/M
3300031947Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000HEnvironmentalOpen in IMG/M
3300031954Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)EnvironmentalOpen in IMG/M
3300031981Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25EnvironmentalOpen in IMG/M
3300032001Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)EnvironmentalOpen in IMG/M
3300032013Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3EnvironmentalOpen in IMG/M
3300032052Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19EnvironmentalOpen in IMG/M
3300032059Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27EnvironmentalOpen in IMG/M
3300032063Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17EnvironmentalOpen in IMG/M
3300032076Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)EnvironmentalOpen in IMG/M
3300032160Sb_50d combined assembly (MetaSPAdes)EnvironmentalOpen in IMG/M
3300032261Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)EnvironmentalOpen in IMG/M
3300033289Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108EnvironmentalOpen in IMG/M
3300033433Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MNEnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
AF_2010_repII_A01DRAFT_105188123300000580Forest SoilTDIETTVAMSAREATETFAAAGKAARSLRSAGHA*
JGI12335J11872_10079023300000675Tropical Forest SoilAGGSLSDIETTIAMTAKDAAATFESAGKAAKAFRSAGHP*
JGI12410J11868_10311123300000721Tropical Forest SoilGSLSDIETTIAMTAKDAAATFESAGKAAKAFRSAGHP*
AP72_2010_repI_A001DRAFT_103661523300000893Forest SoilGSLAEVETTVAMTAKDAHATFVSAGKAAKAFRSAGRS*
JGI1027J12803_10386673313300000955SoilGGSFSDIETTVAMTAEDARRTFEAAGAAARDFRSAGRS*
Ga0066395_1020600313300004633Tropical Forest SoilAAGGSLSNIETTVAMTAKEATATFKSAGKAAKGFRSMAHAA*
Ga0066388_10664959913300005332Tropical Forest SoilGGGSLSEVETTVAMTAKDAHATFVSAAKAAKAFRSAGRS*
Ga0070662_10001094913300005457Corn RhizosphereAGGSLSEIETTVAMTADDAKATFGAAGKAATAFRKKGACS*
Ga0070698_10014103043300005471Corn, Switchgrass And Miscanthus RhizosphereAGGSLSDIETTVAMTAKDAHATFVSAGKAAKSFRSAGRS*
Ga0066903_10102281833300005764Tropical Forest SoilGSLSDIETTVAMSAQDAHATFQAASKAAKDFRSAGRS*
Ga0066903_10138916513300005764Tropical Forest SoilGGSLSDVETTVAMTAKDAFTTFESAGKAAKAFRSAGRR*
Ga0066903_10760367033300005764Tropical Forest SoilGSLSDIETTVAMTAKEAHATFEAASKAAKDFRSAGRS*
Ga0066903_10770064223300005764Tropical Forest SoilLSDIETTVAMTAKDAVATFKSAGKAAKTFRSAGRS*
Ga0070717_1048822213300006028Corn, Switchgrass And Miscanthus RhizosphereSLSDIETTVAMTAKDAHATFVSAGKAAKSFRSAGRS*
Ga0066696_1041802613300006032SoilGGSLSEVETTVAMTAKDAAATFKSAGKVAKDFRSAGRS*
Ga0075432_1021791823300006058Populus RhizosphereGGSLSDVETTVAMTAKDAAATFEAAGKAAQGFRSAGHA*
Ga0070715_1009616833300006163Corn, Switchgrass And Miscanthus RhizosphereEIETTVAMTADDAKATFGAAGKAATAFRKKGARS*
Ga0079220_1010953633300006806Agricultural SoilGGGSLSDVETTIAMTANEAFATFESAAKAAKAFRSAGRS*
Ga0075421_10016888483300006845Populus RhizosphereAAAGGSLSEIETTVAMTAKDAHATFVSAGKAAKSFRSAGR*
Ga0075434_10043232243300006871Populus RhizosphereSDIETTVAMSAKDAVATFEAAGKAAKGFRSAGRP*
Ga0066709_10191861213300009137Grasslands SoilGGSLSEIETTVAMTAKDAHATFESAGKAAKGFRSAGRS*
Ga0114129_1049607613300009147Populus RhizosphereSLSDVETTVAMTAAEAKATFEAAGKVAEDFRSAGRS*
Ga0114129_1189231923300009147Populus RhizosphereAAGGSLSDIETTPAMTAKDAHATFVSAGKVAKGFRSAGRA*
Ga0114129_1348244223300009147Populus RhizosphereAGGSLTDIETTPAMTAKDAHATFVSAGKAAKTFRSAGRA*
Ga0116222_132935913300009521Peatlands SoilVLTVDSSLSEIETTVAMAAKDARATFESAGKAAKSFRSAGRS*
Ga0105237_1064634113300009545Corn RhizosphereAGGSLTDIETTVAMTARDAAATFESAGKAARNFRSAGHS*
Ga0126382_1090183913300010047Tropical Forest SoilLSDIETTPAMTAKDAHAAFESATKAAKAFRSAGRA*
Ga0126373_1178613013300010048Tropical Forest SoilSLSEVETTVAMTAKDAHATFVSASKAAKAFRSAGRS*
Ga0134070_1019610823300010301Grasslands SoilLVAAGGGSLSEVETTVAMTAKDAHATFVSAGKAAKAFRSAGRS*
Ga0126370_1029293323300010358Tropical Forest SoilGSLTDIETIPAMTAKDAHATFVSAGKAAKTFRSAGRAEVSGGGFS*
Ga0126376_1011017213300010359Tropical Forest SoilGGSLSEIETTVAMTAKDAHATFESAAKAAKAFRSAGRS*
Ga0126378_1104021523300010361Tropical Forest SoilLSDIETTVAMSAQDAHATFQAAAKAAKDFRSAGRA*
Ga0126378_1185822223300010361Tropical Forest SoilSLSEVETTVAMTAKDAHATFVSAAKAAKAFRRAGRS*
Ga0126377_1025005633300010362Tropical Forest SoilGGSLSDIETTVAMTAKDAAATFEIAGKAAKSFRSAGRH*
Ga0126377_1261493213300010362Tropical Forest SoilAAAGGSLTEVETTVAMTAKEAQATFESAGKAAKNFRSA*
Ga0126379_1168159533300010366Tropical Forest SoilLSDVETTVAMTAKDAFTTFESAGKAAKAFRSAGRR*
Ga0126379_1311550223300010366Tropical Forest SoilSEIETTVAMTAKDAHATFESAAKAAKAFRSAGRSQVRARLSG*
Ga0126379_1369463413300010366Tropical Forest SoilSDVETTVAMTAKDAVATFESAGKAAREFRSAGRS*
Ga0126381_10462770413300010376Tropical Forest SoilGSLSEVETTVAMTAKDAHATFVSASKAAKAFRSAGRS*
Ga0126383_1095324413300010398Tropical Forest SoilGGSLSDIETTVAMTAKDAHATFEAASKAAKDFRSAGRS*
Ga0126383_1273241013300010398Tropical Forest SoilGRSLSDVETTAAMTTKDAHATFVSAGKAAKDFRSAGRS*
Ga0105246_1178710113300011119Miscanthus RhizosphereAGGGSLSDVETNVAMTAADAKATFEAAGKAAREFRSAGRS*
Ga0137364_1044986333300012198Vadose Zone SoilLSEIETTVAMTAKDAHATFESAGKAAKGFRSAGRS*
Ga0137382_1022372013300012200Vadose Zone SoilSLSEIETTVAMTAKDAHATFESAGKAAKGFRSAGRS*
Ga0164301_1168590513300012960SoilSLCDVETTLAMTAKDAAATFEAAGKAARGFRSAGHS*
Ga0126369_1055362113300012971Tropical Forest SoilSLSDVETTVAMTAKDATATFESAGKAAREFRSAGRS*
Ga0126369_1323040113300012971Tropical Forest SoilGGSLSDVETTVAMTAKDAFTTFESASKAAKAFRSAGRR*
Ga0164309_1100686233300012984SoilGGSLTDIETTVAMTARDAAATFESAGKVARNFRSAGHS*
Ga0157378_1066591513300013297Miscanthus RhizosphereGVALSLIKTTVAMTADDAKATFGAAGKAATAFRKKGECS*
Ga0132258_1361893023300015371Arabidopsis RhizosphereLSDIETTVAMTAEDAKATFGAAGKAATAFRKAGHS*
Ga0182036_1034196113300016270SoilAAAGGGSLSEVETTVAMTAKDAHATFVSASKAAKAFRSAGRS
Ga0182036_1176791023300016270SoilGGGSLSDVETTIAMTAKEAFATFESAAKAARAFRSAGR
Ga0182041_1014435013300016294SoilLSDIETTVAMSAQDAHATFQAAAKAAKDFRSAGRS
Ga0182041_1163584023300016294SoilLSDVETTVAMTAKDAFSTFESAGKAAKAFRSAGLK
Ga0182035_1096684223300016341SoilGGGSLSDVETTVAMTAKDAFTTFESASKAAKAFRSAGRR
Ga0182035_1152688933300016341SoilAAAAGGSLTDIETVPAMTAKDAHATFMSAAKAAKTFRSAGRA
Ga0182034_1056969233300016371SoilGGSLSEVETTVAMTAKDAHATFVSASKAAKAFRSAGRS
Ga0182034_1057914333300016371SoilAAAGGSLTDIETVPAMTAKDAHATFVSAQKAAKTFRSAGRA
Ga0182037_1034317613300016404SoilAASGGGSLSDVETTIAMTAKEAFATFESAAKAARAFRSAGR
Ga0182039_1103879513300016422SoilAAGGSLSDVETTIAMTAKDAFTTFESAAKAAKAFRSAGRQ
Ga0182038_1015021933300016445SoilLTDIETVPAMTAKDAHATFVSAQKAAKAFRSAGRT
Ga0182038_1116926613300016445SoilGGSLSDIETTVAMTAKEAASTFESAGKAAKAFRSAGR
Ga0187805_1063538513300018007Freshwater SedimentLCDVETTVAMTAKDAATTFEAAGKAAKDFRSAGRS
Ga0187765_1036516113300018060Tropical PeatlandSLSDIETTVAMTARDAAATFEAAGKAARSFRSAGRS
Ga0184635_1006669143300018072Groundwater SedimentAAAAGGSLSDVETTPAMTAEDAHTTFVSAGKAAKAFRSAGRV
Ga0184635_1022882813300018072Groundwater SedimentAGGSLSDIETTPAMTAKDAHATFVSAGKAAKTFRSAGRA
Ga0190274_1286608223300018476SoilLSEIETTVAMTAKDAHATFESAGKAAKSFRSAGRS
Ga0210381_1001741233300021078Groundwater SedimentAAGGSLTDIETTPAMTAKDAHATFVSAGKAAKTFRSAGRA
Ga0210387_1081482013300021405SoilGGSLSDIETTVAMTAKDAHATFESAGKAAKNFRSAGRS
Ga0224452_122580813300022534Groundwater SedimentAAAGGSLTDIETTPAMTAKDAHATFVSAGKAAKTFRSAGRA
Ga0222622_1046109033300022756Groundwater SedimentLSEIETTVAMTAKDAHATFESAGKAAKGFRSAGRS
Ga0247799_109635613300023072SoilLSDVETTLAMTAEDARATFEAAGKVAKQFRSAGRS
Ga0207693_1029787443300025915Corn, Switchgrass And Miscanthus RhizosphereLSDVETTLAMTAKEAFATFESAAKAAKAFRSAGRS
Ga0207667_1038192533300025949Corn RhizosphereGSLSEIETTVAMTADDAKATFGAAGKAATAFRKKGARS
Ga0207683_1104785623300026121Miscanthus RhizosphereFEIETTVAMTAEDAKATFRAAGKAATAFRKKGARS
Ga0207723_10209913300026824Tropical Forest SoilGGSLTDIETVPAMTAKDAHATFMSAAKAAKTFRSAGRT
Ga0207859_100278613300026859Tropical Forest SoilLAAAAGGSLTDIETVPAMTAKDAHATFMSAAKAAKTFRSAGRT
Ga0207806_102610323300027049Tropical Forest SoilAAAGGSLTDIETVPAMTAKDAHATFMSAAKAAKTFRSAGRA
Ga0209799_100114613300027654Tropical Forest SoilVAAAGGGSLAEIETTVAMTAKDAHATFVSASKAAKAFRSAGRS
Ga0207862_115996313300027703Tropical Forest SoilLSDIETTIAMTAKDAHATFESAGKAAKEFRSAGRS
Ga0209178_115027723300027725Agricultural SoilLSDIETTVAMTAQQAAETFRAAGTAAKDFRSAGRHAA
Ga0209069_1043668113300027915WatershedsLAAAGGGSLSDVETTIAMTAKEAFATFESASKAAKTFRSAGRS
Ga0268265_1067954613300028380Switchgrass RhizosphereSLSESETTVAMTADDAKATFGAAGKAATAFRKKGACS
Ga0307313_1017745823300028715SoilAGGSLSEIETTVAMTAKDAHATFESAGKAAKGFRSAGRS
Ga0307312_1087263313300028828SoilAAAGGSLTDIETTPAMTAKDAHATFVSAAKAAKSFRSAGRA
Ga0307278_1025103613300028878SoilAGGSLSEIETTVAMTAKDAHATFQSAGKAAKGFRSAGRS
Ga0307497_1002832523300031226SoilAGGSLTDIETTPAMTAKDAHATFVSAAKAAKSFRSAGRA
Ga0170818_10894905513300031474Forest SoilGSLSDVETTVAMTAKDAATTFESAGKAARAFRSAGRA
Ga0318516_1008762323300031543SoilMQSARASDVETTVAMTAKDAHATFVSAGKAAKAFRSAGRS
Ga0318573_1066953213300031564SoilSLSDIETTVAMSAQDAHATFQAAAKAAKDFRSAGRS
Ga0318515_1029163713300031572SoilSLSDIETTIAMSAQDAHATFQAAAKAAKEFRSAGRA
Ga0310915_1127060613300031573SoilLRADIETTIAMTSKDALATFKSAGKTAKEFRSAGRS
Ga0306917_1006113943300031719SoilLSDIETTVAMTARDAAATFEAAGKAARNFRSAGRS
Ga0306917_1131334613300031719SoilAAGGGSLSDVETTVAMTAKDAFTTFESASKAAKAFRSAGRR
Ga0307469_1037151923300031720Hardwood Forest SoilGSLSDIETTVAMTAKEAAATFEAAGKAAKGFRSAGRA
Ga0318501_1033163823300031736SoilLAAAGGGSLSEVETTVAMTAKDAHATFVSASKAAKAFRSAGRP
Ga0306918_1028660813300031744SoilGGGSLSEIETTVAMNAKDAHATFESAAKAAKAFRSAGRS
Ga0306918_1030316513300031744SoilSLSDVETTVAMTAKDAHATFVSAGKAAKDFRSAGRS
Ga0318494_1093931013300031751SoilSLSEVETTVAMTAKDAHATFVSASKAAKAFRSAGRS
Ga0307477_1040309713300031753Hardwood Forest SoilLSDVETTIAITAKDAATTFETAGKAAKAFRSAARSEVNGRL
Ga0318537_1019848023300031763SoilLSDIETTVAMTAKDAHATFESAGKAAKSFRSAGRS
Ga0318546_1033791613300031771SoilMQSARASDVETTVAMTAKDAHATFVSAGKAAKAFR
Ga0318546_1047708813300031771SoilAAAGGGSLSEVETTVAMTAKDAHATFVSASKAAKAFRSAGRP
Ga0318546_1083714133300031771SoilPALLATAGGGSLAEVETTVAMTAKDAHATFVSVGKAAKAFRSAGRS
Ga0318546_1085438423300031771SoilEECTACGMQSARASDVETTVAMTAKDAHATFVSAGKAAKAFRCAGRS
Ga0318529_1001799313300031792SoilAGGSLSDIETTPAMTAKEAHATFESAAKAAKAFRSAGRS
Ga0310917_1090504213300031833SoilLSDIETTIAMSAQDAHATFQAAAKAAKDFRSAGRS
Ga0318517_1012058613300031835SoilAAAGGGSLSEIETTVAMNAKDAHATFESAAKAAKAFRSAGRS
Ga0306925_1008847653300031890SoilLSEVETTVAMTAKDAHATFVSASKAAKAFRSAGRS
Ga0306925_1035766253300031890SoilSLSEVETTVAMTAKDAHATFVSASKAAKAFRSAGRT
Ga0306921_1053130633300031912SoilAAAGGSLTDIETVPAMTAKDAHATFVSAQKAAKAFRSAGRT
Ga0306921_1062682113300031912SoilGSLSDIETTIAMTAKDAHATFESAGKAAKEFRSAGRS
Ga0310912_1013524643300031941SoilAGGGSLSDIETTIAMSAQDAHATFQAAAKAAKDFRSAGRS
Ga0310884_1015898313300031944SoilAAAGGSLSDVETTPAMTSEDAHATFVSAGKAAKAFRSAGRT
Ga0310913_1026319213300031945SoilAGGSLSDIETTIAMIAKEATATFESSGKAAKEFRSAGRS
Ga0310913_1082542913300031945SoilLAAAGGGSLSEVETTVAMTAKDAHATFVSASKAAKAFRSAGRS
Ga0310910_1040953813300031946SoilAGGGSLSEVETTVAMTAKDAHATFVSASKAAKAFRSAGRT
Ga0310910_1083010213300031946SoilLSDIETTVAMTAKDAAATFESAGRAAKAFRSAGRS
Ga0310910_1091658713300031946SoilLSDIETTVAMTAKEAHATFEAASKAAKDFRSAGRS
Ga0310910_1116598523300031946SoilGGSLSDVETTVAMTAKDAFTTFESASKAAKAFRSAGRR
Ga0310909_1161139323300031947SoilLSDVETTVAMTAKDAHATFVSAGKAAKDFRSAGRS
Ga0306926_1044549213300031954SoilGGGSLSDIETTIAMSAQDAHATFQAAAKAAKDFRSAGRS
Ga0306926_1275299013300031954SoilAAAGGGSLSEVETTVAMTAKDAHATFVSASKAAKAFRSAGRT
Ga0318531_1000840463300031981SoilAAGGGSLSEVETTVAMTAKDAHATFVSASKAAKAFRSAGRT
Ga0306922_1175111513300032001SoilGGGSLSDIETTIAMSAQDAHATFQAAAKAAKEFRSAGRS
Ga0310906_1120934513300032013SoilAGGSLSNVETTVAMTAKDAAATFEAAGKAAQGFRSAGHA
Ga0318506_1026746913300032052SoilGSLSDIETTVAMTARDAAATFEAAGKAARNFRSAGRS
Ga0318533_1050736423300032059SoilLSDIETTVAMSAKEAHATFESATKAAKNFRSAGAR
Ga0318504_1065165713300032063SoilLAAAGGGSLSEVETTVAMTAKDAHATFVSASKAAKAFRSAGRT
Ga0306924_1060778813300032076SoilGGSLSDIETTVAMSAPDAHATFQAAAKAAKDFRSAGRS
Ga0306924_1082284213300032076SoilGGSLTDIETTPAMTAKDAHATFVSAAKAAKSFRSAGRA
Ga0306924_1110208223300032076SoilGSLSDIETTVAMSAQDAHATFQAASKAAKDFRSAGRS
Ga0306924_1127645013300032076SoilGGSLSEIETTVAMTAKDAATTFESAGKAAKAFRSAGRP
Ga0311301_1005774013300032160Peatlands SoilVLTVDSSLSEIETTVAMAAKDARATFESAGKAAKSFRSAGRS
Ga0306920_10036851213300032261SoilAGGGSLSDVETTVAMTAQDAHAMFKTAAKAAKDFRSAGRS
Ga0306920_10127674213300032261SoilGSLSDVETTVAMTAKDAFTTFESAGKAAREFRSAGRS
Ga0306920_10140920533300032261SoilLSEIETTVAMNAKDAHATFESAAKAAKAFRSAGRS
Ga0306920_10422617913300032261SoilAGGGSLSDIETTVAMSAQDAHATFQAASKAAKDFRSAGRS
Ga0310914_1178513013300033289SoilGGSLSDVETTVAMTAKDAVTTFESAGKAAREFRSAGRP
Ga0326726_1174543713300033433Peat SoilAAGGSLTDIETTPAMTAKDAHATFVSAGKAAKAFRSAGRA


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