Metagenome / Metatranscriptome Family F054388

Basic Information
Family ID	F054388
Family Type	Metagenome / Metatranscriptome
Number of Sequences	140
Average Sequence Length	96 residues
Representative Sequence	MHLDVERQLRTTHEPLSIVVGGDIWDLYVFGVTRVERDWWVQIAVVGPRSCTVTVRVDAANGRGAAAHEIIRLVTDWLLEDETSDHAFLEHSVLEARAS
Number of Associated Samples	106
Number of Associated Scaffolds	140

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	55.71 %
% of genes near scaffold ends (potentially truncated)	45.00 %
% of genes from short scaffolds (< 2000 bps)	89.29 %
Associated GOLD sequencing projects	87
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.75

Most Common Taxonomy
Group	Bacteria (60.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere (8.571 % of family members)
Environment Ontology (ENVO)	Unclassified (59.286 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (72.143 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 28.35% β-sheet: 32.28% Coil/Unstructured: 39.37%
Feature Viewer

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SCOP family	SCOP domain	Representative PDB	TM-score
e.29.1.1: beta and beta-prime subunits of DNA dependent RNA-polymerase	d4c2mb_	4c2m	0.62
e.29.1.1: beta and beta-prime subunits of DNA dependent RNA-polymerase	d4c2mb_	4c2m	0.62
f.4.1.1: OMPA-like	d1p4ta_	1p4t	0.58
b.61.6.1: YceI-like	d1y0ga_	1y0g	0.58
f.10.1.1: Viral glycoprotein, central and dimerisation domains	d3n40f1	3n40	0.58
d.20.1.1: UBC-like	d6s98a_	6s98	0.58
f.4.1.1: OMPA-like	d1p4ta_	1p4t	0.58
b.61.6.1: YceI-like	d1y0ga_	1y0g	0.58
f.10.1.1: Viral glycoprotein, central and dimerisation domains	d3n40f1	3n40	0.58
d.20.1.1: UBC-like	d6s98a_	6s98	0.58

Pfam ID	Name	% Frequency in 140 Family Scaffolds
PF02687	FtsX	23.57
PF12704	MacB_PCD	19.29
PF00311	PEPcase	4.29
PF01156	IU_nuc_hydro	1.43
PF13360	PQQ_2	1.43
PF13742	tRNA_anti_2	0.71
PF02570	CbiC	0.71
PF00106	adh_short	0.71
PF14559	TPR_19	0.71
PF00950	ABC-3	0.71
PF01636	APH	0.71

COG ID	Name	Functional Category	% Frequency in 140 Family Scaffolds
COG2352	Phosphoenolpyruvate carboxylase	Energy production and conversion [C]	4.29
COG1957	Inosine-uridine nucleoside N-ribohydrolase	Nucleotide transport and metabolism [F]	1.43
COG0609	ABC-type Fe3+-siderophore transport system, permease component	Inorganic ion transport and metabolism [P]	0.71
COG1108	ABC-type Mn2+/Zn2+ transport system, permease component	Inorganic ion transport and metabolism [P]	0.71
COG2082	Precorrin-8X methylmutase CbiC/CobH	Coenzyme transport and metabolism [H]	0.71
COG4606	ABC-type enterochelin transport system, permease component	Inorganic ion transport and metabolism [P]	0.71

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	60.00 %
Unclassified	root	N/A	40.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	60.00 %
Unclassified	root	N/A	40.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	60.00 %
Unclassified	root	N/A	40.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.00 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	28.57 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.57 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.71 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.00 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	20.71 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.57 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1.43 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.71 %
Vicinamibacteria	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria	0.71 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.00 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	20.71 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.57 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	1.43 %
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	0.71 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.71 %
Vicinamibacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.00 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	20.71 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.57 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	1.43 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.71 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.71 %
Vicinamibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.00 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	20.71 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.57 %
Candidatus Solibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	1.43 %
Luteitalea	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea	0.71 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.71 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.00 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	20.71 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.57 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	0.71 %
Luteitalea pratensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	0.71 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.71 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.71 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2166559005\|cont_contig54563	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	841	Open in IMG/M
3300001686\|C688J18823_10443071	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	837	Open in IMG/M
3300002568\|C688J35102_118506664	Not Available	566	Open in IMG/M
3300002568\|C688J35102_120599644	All Organisms → cellular organisms → Bacteria	1226	Open in IMG/M
3300004114\|Ga0062593_100666829	All Organisms → cellular organisms → Bacteria	1007	Open in IMG/M
3300004153\|Ga0063455_100014221	All Organisms → cellular organisms → Bacteria	1958	Open in IMG/M
3300004156\|Ga0062589_101528257	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	658	Open in IMG/M
3300005290\|Ga0065712_10005629	All Organisms → cellular organisms → Bacteria	4568	Open in IMG/M
3300005331\|Ga0070670_102263241	Not Available	501	Open in IMG/M
3300005334\|Ga0068869_100120108	All Organisms → cellular organisms → Bacteria	2009	Open in IMG/M
3300005334\|Ga0068869_100179591	All Organisms → cellular organisms → Bacteria	1659	Open in IMG/M
3300005335\|Ga0070666_10016744	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	4693	Open in IMG/M
3300005335\|Ga0070666_10162782	All Organisms → cellular organisms → Bacteria	1560	Open in IMG/M
3300005335\|Ga0070666_11058926	Not Available	602	Open in IMG/M
3300005338\|Ga0068868_100187196	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	1720	Open in IMG/M
3300005338\|Ga0068868_101532423	Not Available	625	Open in IMG/M
3300005340\|Ga0070689_101587108	Not Available	594	Open in IMG/M
3300005343\|Ga0070687_100937757	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	623	Open in IMG/M
3300005344\|Ga0070661_100365267	All Organisms → cellular organisms → Bacteria	1135	Open in IMG/M
3300005365\|Ga0070688_101538812	Not Available	542	Open in IMG/M
3300005367\|Ga0070667_101278277	All Organisms → cellular organisms → Bacteria	687	Open in IMG/M
3300005456\|Ga0070678_100518655	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1054	Open in IMG/M
3300005459\|Ga0068867_100345635	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1240	Open in IMG/M
3300005466\|Ga0070685_10999433	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	627	Open in IMG/M
3300005471\|Ga0070698_100637832	Not Available	1006	Open in IMG/M
3300005535\|Ga0070684_100232618	All Organisms → cellular organisms → Bacteria	1683	Open in IMG/M
3300005539\|Ga0068853_101651721	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	621	Open in IMG/M
3300005564\|Ga0070664_100691014	All Organisms → cellular organisms → Bacteria → Proteobacteria	950	Open in IMG/M
3300005615\|Ga0070702_101448843	Not Available	563	Open in IMG/M
3300005616\|Ga0068852_101262476	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	760	Open in IMG/M
3300005617\|Ga0068859_102532402	Not Available	565	Open in IMG/M
3300005618\|Ga0068864_100767597	All Organisms → cellular organisms → Bacteria	946	Open in IMG/M
3300005764\|Ga0066903_101413438	All Organisms → cellular organisms → Bacteria → Acidobacteria	1308	Open in IMG/M
3300005842\|Ga0068858_100039597	All Organisms → cellular organisms → Bacteria	4371	Open in IMG/M
3300005844\|Ga0068862_101822928	All Organisms → cellular organisms → Bacteria	618	Open in IMG/M
3300006047\|Ga0075024_100334661	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	752	Open in IMG/M
3300006051\|Ga0075364_10539667	Not Available	797	Open in IMG/M
3300006163\|Ga0070715_10167544	All Organisms → cellular organisms → Bacteria	1091	Open in IMG/M
3300006358\|Ga0068871_100879137	All Organisms → cellular organisms → Bacteria → Acidobacteria	830	Open in IMG/M
3300006358\|Ga0068871_102367318	Not Available	506	Open in IMG/M
3300006572\|Ga0074051_11321943	All Organisms → cellular organisms → Bacteria	859	Open in IMG/M
3300006579\|Ga0074054_11372821	Not Available	567	Open in IMG/M
3300006624\|Ga0101567_11175326	Not Available	505	Open in IMG/M
3300006881\|Ga0068865_100288903	All Organisms → cellular organisms → Bacteria	1308	Open in IMG/M
3300009098\|Ga0105245_10874621	All Organisms → cellular organisms → Bacteria → Proteobacteria	939	Open in IMG/M
3300009101\|Ga0105247_10100547	All Organisms → cellular organisms → Bacteria	1848	Open in IMG/M
3300009101\|Ga0105247_11812807	Not Available	508	Open in IMG/M
3300009174\|Ga0105241_11927737	Not Available	580	Open in IMG/M
3300009177\|Ga0105248_10005976	All Organisms → cellular organisms → Bacteria → Proteobacteria	13366	Open in IMG/M
3300009177\|Ga0105248_10102040	All Organisms → cellular organisms → Bacteria	3234	Open in IMG/M
3300009177\|Ga0105248_11740531	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	707	Open in IMG/M
3300009553\|Ga0105249_10892957	All Organisms → cellular organisms → Bacteria → Acidobacteria	955	Open in IMG/M
3300009553\|Ga0105249_12093785	Not Available	639	Open in IMG/M
3300009553\|Ga0105249_12744056	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	564	Open in IMG/M
3300009649\|Ga0105855_1014338	All Organisms → cellular organisms → Bacteria → Acidobacteria	2352	Open in IMG/M
3300009660\|Ga0105854_1068051	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1090	Open in IMG/M
3300009661\|Ga0105858_1187132	Not Available	602	Open in IMG/M
3300010397\|Ga0134124_10169785	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1959	Open in IMG/M
3300010400\|Ga0134122_11515807	Not Available	690	Open in IMG/M
3300010880\|Ga0126350_12032149	Not Available	590	Open in IMG/M
3300011106\|Ga0151489_1621533	Not Available	605	Open in IMG/M
3300011119\|Ga0105246_11203519	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	697	Open in IMG/M
3300012212\|Ga0150985_108914042	All Organisms → cellular organisms → Bacteria	2127	Open in IMG/M
3300012212\|Ga0150985_109452958	All Organisms → cellular organisms → Bacteria	1238	Open in IMG/M
3300012212\|Ga0150985_110516348	All Organisms → cellular organisms → Bacteria	1276	Open in IMG/M
3300012212\|Ga0150985_113176844	All Organisms → cellular organisms → Bacteria → Acidobacteria	770	Open in IMG/M
3300012212\|Ga0150985_115805341	All Organisms → cellular organisms → Bacteria → Acidobacteria	1643	Open in IMG/M
3300012212\|Ga0150985_120091481	All Organisms → cellular organisms → Bacteria	1624	Open in IMG/M
3300012469\|Ga0150984_103236777	All Organisms → cellular organisms → Bacteria	1301	Open in IMG/M
3300012469\|Ga0150984_107969749	All Organisms → cellular organisms → Bacteria	936	Open in IMG/M
3300012469\|Ga0150984_121449490	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	701	Open in IMG/M
3300012469\|Ga0150984_123674954	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1661	Open in IMG/M
3300012683\|Ga0137398_10822200	Not Available	650	Open in IMG/M
3300012929\|Ga0137404_10799800	Not Available	856	Open in IMG/M
3300012930\|Ga0137407_11609407	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	619	Open in IMG/M
3300012930\|Ga0137407_12277700	Not Available	518	Open in IMG/M
3300013306\|Ga0163162_12004804	Not Available	663	Open in IMG/M
3300013306\|Ga0163162_12884785	Not Available	553	Open in IMG/M
3300013306\|Ga0163162_13011276	Not Available	541	Open in IMG/M
3300013308\|Ga0157375_11243141	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	874	Open in IMG/M
3300013308\|Ga0157375_11893391	Not Available	708	Open in IMG/M
3300014325\|Ga0163163_10006407	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	10284	Open in IMG/M
3300014325\|Ga0163163_10342183	All Organisms → cellular organisms → Bacteria	1551	Open in IMG/M
3300014498\|Ga0182019_10414131	All Organisms → cellular organisms → Bacteria → Proteobacteria	921	Open in IMG/M
3300014745\|Ga0157377_10213628	Not Available	1231	Open in IMG/M
3300014968\|Ga0157379_10356821	Not Available	1339	Open in IMG/M
3300014969\|Ga0157376_10142639	Not Available	2151	Open in IMG/M
3300015245\|Ga0137409_11267900	Not Available	579	Open in IMG/M
3300015371\|Ga0132258_11789009	All Organisms → cellular organisms → Bacteria	1548	Open in IMG/M
3300015373\|Ga0132257_103729650	Not Available	554	Open in IMG/M
3300015374\|Ga0132255_104428947	Not Available	595	Open in IMG/M
3300015374\|Ga0132255_105551905	Not Available	534	Open in IMG/M
3300016422\|Ga0182039_11036673	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	737	Open in IMG/M
3300016445\|Ga0182038_11642693	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	578	Open in IMG/M
3300017792\|Ga0163161_11668745	Not Available	564	Open in IMG/M
3300019890\|Ga0193728_1088671	All Organisms → cellular organisms → Bacteria	1446	Open in IMG/M
3300019890\|Ga0193728_1294943	Not Available	619	Open in IMG/M
3300025899\|Ga0207642_10200210	All Organisms → cellular organisms → Bacteria	1102	Open in IMG/M
3300025900\|Ga0207710_10199544	All Organisms → cellular organisms → Bacteria → Proteobacteria	988	Open in IMG/M
3300025903\|Ga0207680_10880259	Not Available	642	Open in IMG/M
3300025908\|Ga0207643_10445474	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	823	Open in IMG/M
3300025911\|Ga0207654_10536789	All Organisms → cellular organisms → Bacteria → Acidobacteria	829	Open in IMG/M
3300025920\|Ga0207649_10703417	Not Available	784	Open in IMG/M
3300025923\|Ga0207681_10730390	Not Available	825	Open in IMG/M
3300025925\|Ga0207650_10174703	All Organisms → cellular organisms → Bacteria → Acidobacteria	1709	Open in IMG/M
3300025925\|Ga0207650_10612530	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	916	Open in IMG/M
3300025926\|Ga0207659_10946426	Not Available	741	Open in IMG/M
3300025938\|Ga0207704_11605452	Not Available	559	Open in IMG/M
3300025941\|Ga0207711_10065311	All Organisms → cellular organisms → Bacteria	3146	Open in IMG/M
3300025942\|Ga0207689_10349466	All Organisms → cellular organisms → Bacteria	1229	Open in IMG/M
3300025960\|Ga0207651_10768336	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	853	Open in IMG/M
3300025961\|Ga0207712_11343241	Not Available	639	Open in IMG/M
3300025961\|Ga0207712_11798990	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	549	Open in IMG/M
3300025986\|Ga0207658_12019150	Not Available	525	Open in IMG/M
3300026023\|Ga0207677_11381315	Not Available	648	Open in IMG/M
3300026035\|Ga0207703_10096515	All Organisms → cellular organisms → Bacteria	2496	Open in IMG/M
3300026035\|Ga0207703_11101660	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	763	Open in IMG/M
3300026041\|Ga0207639_10377370	Not Available	1272	Open in IMG/M
3300026089\|Ga0207648_10497915	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1115	Open in IMG/M
3300026095\|Ga0207676_10045384	All Organisms → cellular organisms → Bacteria	3395	Open in IMG/M
3300026220\|Ga0209855_1007874	All Organisms → cellular organisms → Bacteria	1904	Open in IMG/M
3300027560\|Ga0207981_1111602	Not Available	504	Open in IMG/M
3300027866\|Ga0209813_10374902	Not Available	568	Open in IMG/M
3300027894\|Ga0209068_10960393	Not Available	507	Open in IMG/M
3300027915\|Ga0209069_10303550	Not Available	848	Open in IMG/M
3300028380\|Ga0268265_12188687	Not Available	560	Open in IMG/M
3300028381\|Ga0268264_10151791	All Organisms → cellular organisms → Bacteria	2078	Open in IMG/M
3300028381\|Ga0268264_10587093	All Organisms → cellular organisms → Bacteria	1097	Open in IMG/M
3300028381\|Ga0268264_12147613	Not Available	567	Open in IMG/M
3300028768\|Ga0307280_10239263	Not Available	650	Open in IMG/M
3300028768\|Ga0307280_10284437	Not Available	601	Open in IMG/M
3300031366\|Ga0307506_10218662	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	709	Open in IMG/M
3300031546\|Ga0318538_10141866	All Organisms → cellular organisms → Bacteria	1265	Open in IMG/M
3300032044\|Ga0318558_10637821	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	532	Open in IMG/M
3300032059\|Ga0318533_10901766	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	648	Open in IMG/M
3300032063\|Ga0318504_10417045	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	640	Open in IMG/M
3300032205\|Ga0307472_101927237	Not Available	590	Open in IMG/M
3300034268\|Ga0372943_0042046	All Organisms → cellular organisms → Bacteria	2524	Open in IMG/M
3300034268\|Ga0372943_0698308	Not Available	670	Open in IMG/M
3300034268\|Ga0372943_1113897	Not Available	527	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	62.86%
Environmental	Environmental	36.43%
Engineered	Engineered	0.71%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	62.86%
Terrestrial	Environmental → Terrestrial	34.29%
Aquatic	Environmental → Aquatic	2.14%
Modeled	Engineered → Modeled	0.71%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	34.29%
Rhizoplane	Host-Associated → Plants → Rhizoplane	30.00%
Rhizosphere	Host-Associated → Plants → Rhizosphere	28.57%
Roots	Host-Associated → Plants → Roots	4.29%
Sediment	Environmental → Aquatic → Sediment	2.14%
Simulated Communities (Sequence Read Mixture)	Engineered → Modeled → Simulated Communities (Sequence Read Mixture)	0.71%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	21.43%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	21.43%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	15.00%
Soil	Host-Associated → Plants → Rhizosphere → Soil	13.57%
Loam	Environmental → Terrestrial → Soil → Loam	9.29%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	7.86%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.57%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	2.86%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.14%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	1.43%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.71%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified	0.71%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	21.43%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	15.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	13.57%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	12.86%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	7.86%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	7.14%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.71%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	3.57%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.86%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	2.86%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.14%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.43%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	1.43%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.71%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.71%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified	0.71%

Habitat	Taxonomy	Distribution
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	8.57%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	8.57%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	7.86%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	7.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.29%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	4.29%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.86%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	2.86%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.86%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.86%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.86%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.86%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.86%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	2.86%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.14%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.14%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.14%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.14%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.43%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.43%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.43%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	1.43%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	1.43%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	1.43%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.43%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.43%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.71%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	0.71%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.71%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.71%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.71%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.71%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.71%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.71%
Simulated	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified → Simulated	0.71%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.71%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2166559005	Simulated microbial communities from Lyon, France	Engineered	Open in IMG/M
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006047	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013	Environmental	Open in IMG/M
3300006051	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4	Host-Associated	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006572	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHPB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006579	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006624	Soil microbial communities from the Leymus chinensis steppe, China - after adding 1.75 g N m- 2, yr-1	Environmental	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009649	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-059	Environmental	Open in IMG/M
3300009660	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-058	Environmental	Open in IMG/M
3300009661	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-062	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010880	Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011106	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMC (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014498	Permafrost microbial communities from Stordalen Mire, Sweden - 812E2M metaG	Environmental	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300019890	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026220	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-063 (SPAdes)	Environmental	Open in IMG/M
3300027560	Soil and rhizosphere microbial communities from Laval, Canada - mgLPC (SPAdes)	Environmental	Open in IMG/M
3300027866	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes)	Host-Associated	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300027915	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)	Environmental	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300031366	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 25_S	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300034268	Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_FRD_1.2	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
cont_0563.00003820	2166559005	Simulated	GHTHSVETGMEAEMHFDVERQLRTTHEPLSIAVGSNIWDLYVFGVTRVQRDWWVQIVVVGPRACTVTVRVDSSNGRGAAAHEIIKLVTAWLLEGDTSDHVFLEHPGLRARAS
C688J18823_104430712	3300001686	Soil	PLSIMVAGDVWDLYVFGVTRVQRDWWVQIAVVGPRACTVTVRVDSANGRSAAAHQIVTLVTAWLLEDDASEHVFLEHPSLEARAS*
C688J35102_1185066641	3300002568	Soil	MHMEVERQLRSAHEPLSIVVAGDVWDLYVFGVTRVQRDWWVQIAVVGPRACTVTVRVDSANGRSAAAHQIVTLVTAWLLEDDASEHVFLEHPSLEARAS*
C688J35102_1205996442	3300002568	Soil	MHEPLSIVVADETWDLYVFDVTRVNADWWVQLAVVGPRCGKVTVRVDAANGRGAAAHEILKLVTGWLRDDDRSEHALLEQHGPEARAS*
Ga0062593_1006668292	3300004114	Soil	MHLDVERQLRTTHEPLSIVVGGDIWDLYVFGVTRVERDWWVQIAVVGPRSCTVTVRVDGANGRGAAAHEIIRLVTDWLLEDETSDHAFLEHAILEARAS*
Ga0063455_1000142211	3300004153	Soil	MHEPLSIVAGDETWDLYVIDVTRVHADWWVQLAVVGPRCGKVTVRVDAANGRGAAAHEILRLVTGWLKDEERS
Ga0062589_1015282571	3300004156	Soil	QLRTTHEPLSIVVGGDIWDLYVFGVTRVERDWWVQIAVVGPRSCTVTVRVDGANGRGAAAHEIIRLVTDWLLEDETSDHAFLEHAILEARAS*
Ga0065712_100056293	3300005290	Miscanthus Rhizosphere	MHLDVERQLRTTHEPLSIVVGGEIWDLYVFGVTRVERDWWVQIAVVGPRACTVTVRVDAANGRGAAAHEIIRLVTDWLLEDEASDHAFLEHSVLEARAS*
Ga0070670_1022632411	3300005331	Switchgrass Rhizosphere	MHLDVERQLRTTHEPLSIVVGGDIWDLYVFGVTRVVRDWWVQIAFVGPRSCTVTVRVDASHGRGAAAHEIIRLVTDWLLEDETSDHAFLEHDVLEARAS*
Ga0068869_1001201082	3300005334	Miscanthus Rhizosphere	MRSVETNMEAEMHLDVERQLRTTHEPLSIVVGGDIWDLYVFGVTRVERDWWVQIAVVGPRSCTVTVRVDGANGRGAAAHEIIRLVTDWLLEDETSDHAFLEHSILEARAS*
Ga0068869_1001795912	3300005334	Miscanthus Rhizosphere	MRIEVERQLRTAHEPLSIVVGSDIWDLYVFGVTRVQRDWWVQIAAVGPRSCTVTVRVDAAKGRGAAAHEIVTLVSEWLLEGDPSDHAFLEHPGVERRAS*
Ga0070666_100167442	3300005335	Switchgrass Rhizosphere	MQLDVERQLRTAHEPLSILVGSDIWDLYVFGVTRVHRDWWVQIAVVGPRACTVTVRVDSAAGRGAAAHEIIKLVTAWLLEDHSSDHAFLEHPRLEARAS*
Ga0070666_101627822	3300005335	Switchgrass Rhizosphere	MRIEVERQLRTAHEPLSIIVGSDIWDLYVFGVTRVQRDWWVQIALVGPRSCTVTVRVDSARGRASAAHEIVKLVREWLLEGDVTDHAFLEHPGVEARAS*
Ga0070666_110589262	3300005335	Switchgrass Rhizosphere	MRIEVERQLRTAHEPLSIVVGSDIWDLYVFGVTRVQHDWWVQIVAVGPRSCTVTVRVGAAKGRGAAAHEIVGLVRDWLLEGEVCDHAFLERPGVEAQAC*
Ga0068868_1001871962	3300005338	Miscanthus Rhizosphere	MRIEVERQLRTAHEPLSIIVGSDIWDLYVFGVTRVQRDWWVQIALVGPRSCTVTVRVDSAKGRASAAHEIVKLVREWLLEGDVTDHAFLEHPGVEARAS*
Ga0068868_1015324231	3300005338	Miscanthus Rhizosphere	MHLDVERQLRTTHEPLSIVVGGDIWDLYVFGVTRVERDWWVQIAVVGPRSCTVTVRVDGANGRGAAAHEIIRLVTDWLLEDETSDH
Ga0070689_1015871081	3300005340	Switchgrass Rhizosphere	MHLDVERQLRTTHEPLSIVVGGDIWDLYVFGVTRVARDWWVQIAVVGPRSCTVTVRVDAAHGRGAAAHEIIRLVTDWLLE
Ga0070687_1009377572	3300005343	Switchgrass Rhizosphere	MHLDVERQLRTTHEPLSIVVGGDIWDLYVFGVTRVERDWWVQIAVVGPRSCTVTVRVDAANGRGAAAHEIIRLVTDWLLEDETSDHAFLEHAILEARAS*
Ga0070661_1003652672	3300005344	Corn Rhizosphere	MHLDVERQLRTTHEPLSIVVGGEIWDLYVFGVTRVERDWWVQIAVVGPRSCTVTVRVDAANGRGAAAHEIIRLVTDWLLEDEASEHAFLEHSVLEARAS*
Ga0070688_1015388121	3300005365	Switchgrass Rhizosphere	QLRTTHEPLSIVVGGDIWDLYVFGVTRVARDWWVQIAVVGPRSCTVTVRVDAAHGRGAAAHEIIRLVTDWLLEDETSDHAFLEHSVLEARAS*
Ga0070667_1012782772	3300005367	Switchgrass Rhizosphere	MHIDVERQLRTAHEPLSIIVNDETWDLYVFGVTRVQRDWWVQIAVVGPRACTVTVRVDAARGRGAAAHEIIRLVTEWLLEDDASDHVLLEHAPLEARAS*
Ga0070678_1005186552	3300005456	Miscanthus Rhizosphere	MRIEVERQLRTAHEPLSIIVGSDIWDLYVFGVTRVQRDWWVQIALVGPRSCTVTVRVDSARGRASAAHEIVKLVREWLLEAT*
Ga0068867_1003456351	3300005459	Miscanthus Rhizosphere	MRIEVERQLRTAHEPLSIIVGSDIWDLYVFGVTRVQRDWWVQIALVGPRSCTVTVRVDSARGRASAAHEIVKLVREWLLAGDVTDHAFLEHPGVEARAS*
Ga0070685_109994332	3300005466	Switchgrass Rhizosphere	PVTRRQSKPVLEAEMQLDVERQLRTAHEPLSILVGSDIWDLYVFGVTRVHRDWWVQIAVVGPRACTVTVRVDSAAGRGAAAHEIIKLVTAWLLEDHSSDHAFLEHPRLEARAS*
Ga0070698_1006378321	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MHLDVERQLRTTHEPLSIVVGGDIWDLYVFGVTRVERDWWVQIAVVGPRSCTVTVRVDAANGRGAAAHEIIRLVTDWLLEDETSDHAFLEHSVLEARAS*
Ga0070684_1002326182	3300005535	Corn Rhizosphere	MHLDVERQLRTTHEPLSIVVGGEIWDLYVFGVTRVERDWWVQIAVVGPRACTVTVRVDAANGRGAAAHEIIRLVTDWLLEDEASEHAFLEHSVLEARAS*
Ga0068853_1016517211	3300005539	Corn Rhizosphere	EMHEPLSILVGDDIWDLYVFGVTRVHRDWWVQMAVVGPRACRVTVRVDAAYGRGAAAHEIVTLVSNWLLEDQTSDHVFLEQATLEAKAS*
Ga0070664_1006910142	3300005564	Corn Rhizosphere	MHLDVERQLRTTHEPLSIVVGGEIWDLYVFGVTRVERDWWVQIAVVGPRSCTVTVRVDAANGRGAAAHEIIRLVTDWLLEDEVSEHAFLEHSVLEARAS*
Ga0070702_1014488431	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	PLSIIVGSDIWDLYVFGVTRVQRDWWVQIALVGPRSCTVTVRVDSARGRASAAHEIVKLVREWLLEGDASDHAFLEHPAVEARAS*
Ga0068852_1012624761	3300005616	Corn Rhizosphere	VGDDIWDLYVFGVTRVHRDWWVQMAVVGPRACRVTVRVDSACGRGAAAHEIVTLVRNWLLQDETSDHVFLEQSALEACAS*
Ga0068859_1025324022	3300005617	Switchgrass Rhizosphere	MHLDVERQLRTTHEPLSIVVGGDIWDLYVFGVTRVVRDWWVQIAVVGPRSCTVTVRVDASHGRGAAAHEIIRLVTDWLLEDETSDHAFLEHDVLEARAS*
Ga0068864_1007675972	3300005618	Switchgrass Rhizosphere	MHLDVERQIRTTHEPLSIVVGGDIWDLYVFGVTRVARDWWVQIAVVGPRSCTVTVRVDASNGRGAAAHEIIRLVTEWLLENETSDHAFLEHSVLEARAS*
Ga0066903_1014134382	3300005764	Tropical Forest Soil	MQLDVERQLRTAHEPLSILVGPDIWDLYVFGVTRVHRDWWVQIAVVGPRACTVTVRVDSAGGRGAAAHEIIKLVTAWLLEDHSSDHAFLEHPGLEARAS*
Ga0068858_1000395971	3300005842	Switchgrass Rhizosphere	MHLDVERQLRTTHEPLSIVVGGEIWDLYVFGVTRVERDWWVQIAVVGPRACTVTVRVDAANGRGAAAHEIIRLVTDWLLEDEASEHAFLEHSLLEARAS*
Ga0068862_1018229282	3300005844	Switchgrass Rhizosphere	MRIEVERQLRTAHEPLSIVVGSDIWDLYVFGVTRVQRDWWVQIAAVGPRACTVTVRVDAAKGRGAAAHEIVTLVSEWLLEGDPSDHAFLEHPGVE
Ga0075024_1003346612	3300006047	Watersheds	MHIDVERQLRTAHEPLSIVVGSDIWDLYVFGVTRVQRDWWVQIAVVGPRACTVTVRVDSARGRASAAHEIVKLVKDWLLEGDASDHAFLEHPTLEARAS*
Ga0075364_105396672	3300006051	Populus Endosphere	MHIEVDRQLRVAHEPLSIVVGDDLWDLYVFGVTRIQHDWWVQIAVVGPRSCTVTVRVDSAQGRGAAAHQIVALISAWLLEDDASDHAFLEHGSVERRAS*
Ga0070715_101675442	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MHEPLSIVAGDETWDLYVLDVTRVHADWWVQLAVVGPRCGKVTVRVDAANGRAAAAHEILRLVTAWLKDEERSDHALLEQQTPEAWAS*
Ga0068871_1008791372	3300006358	Miscanthus Rhizosphere	MQLDVERQLRTAHEPLSILVGSDIWDLYVFGVTRVHRDWWVQIAVVGPRACTVTVRVDSAAGRGAAAHEIIKLVTAWLLEDHSSDHAF
Ga0068871_1023673182	3300006358	Miscanthus Rhizosphere	MHIDVERQLRTAHEPLAVVVNDEIWDLYVFGVTKVLRDWWVQIVVVGSRVCTVTVRVDSSSGRGAAAHEIIKLVTAWLREND
Ga0074051_113219432	3300006572	Soil	MHFDVERQLRTTHEPLSIAVGSNIWDLYVFGVTRVQRDWWVQIVVVGPRACTVTVRVDSASGRGAAAHEIIKLVTAWLLEDDTSDHAFLEHPGLRARAS*
Ga0074054_113728211	3300006579	Soil	RRPAMPARRSDSSRLRLYTARHNFFIVLASCGHTHSVETGMEAEMHFDVERQLRTTHEPLSIAVGSNIWDLYVFGVTRVQRDWWVQIVVVGPRACTVTVRVDSASGRGAAAHEIIKLVTAWLLEDDTSDHAFLEHPGLRARAS*
Ga0101567_111753261	3300006624	Soil	PLSILVGGEIWDLYVYGVTRVASDWWVQIAVVGPRCFTATVRVDTAQGRGPAARQIINLISGWLRKDEASDHVFLEAPALEARAS*
Ga0068865_1002889031	3300006881	Miscanthus Rhizosphere	VLEAEMQLDVERQLRTAHEPLSILVGSDIWDLYVFGVTRVHRDWWVQIAVVGPRACTVTVRVDSAAGRGAAAHEIIKLVTAWLLEDHSSDHAFLEHPRLEARAS*
Ga0105245_108746212	3300009098	Miscanthus Rhizosphere	MEAEMHIDDARQVRTTHEPLSIVVGDDIWDLYVFGVTRVERDWWVQIAVAGPRACTVTVRVDAAKGRGAAAHEIIRLVTDWLLEDEASDHAFLEHSVLEARAS*
Ga0105247_101005472	3300009101	Switchgrass Rhizosphere	MEAEMHLDVERQLRTTHEPLSIVVGGEIWDLYVFGVTRVERDWWVQIAVVGPRSCTVTVRVDAANGRGAAAHEIIRLVTDWLLEDEASEHAFLEHSVLEARAS*
Ga0105247_118128071	3300009101	Switchgrass Rhizosphere	MEAEMHIDVERQLRTAHEPLSIIVNDETWDLYVFGVTRVQRDWWVQIAVVGPRACTVTVRVDAARGRGAAAHEIIRLVTEWLLEDDASDHVLLEHAPLEARAS*
Ga0105241_119277371	3300009174	Corn Rhizosphere	MHEPLSILVGDDIWDLYVFGVTRVHRDWWVQMAVVGPRACRVTVRVDSACGRGAAAHEIVTLVRNWLLQDETSDHV
Ga0105248_1000597611	3300009177	Switchgrass Rhizosphere	MRSVEKDMEAEMHLDVERQLRTTHEPLSIVVGGEIWDLYVFGVTRVERDWWVQIAVVGPRACTVTVRVDAANGRGAAAHEIIRLVTDWLLEDEASEHAFLEHSVLEARAS*
Ga0105248_101020403	3300009177	Switchgrass Rhizosphere	GGEIWDLYVFGVTRVERDCWVQIAVVGARSCTVTVRVDAAGGRGAAAHEIIRLVTDWLLEDEASDHAFLEHSVLEARAS*
Ga0105248_117405312	3300009177	Switchgrass Rhizosphere	MRSVETNMEAEMRIDVERQLRTAHEPLSIVVGDDIWDLYVFGVTRVQHDWWVQIAVVGPRSCTVTVRVDAAKGRGAAAHEIVKLVTTWLLEDDSSDHAFLEHPSLDTRAS*
Ga0105249_108929571	3300009553	Switchgrass Rhizosphere	LDVERQLRTAHEPLSILVGSDIWDLYVFGVTRVHRDWWVQIAVVGPRACTVTVRVDSAAGRGAAAHEIIKLVTAWLLEDHSSDHAFLEHPRLEARAS*
Ga0105249_120937852	3300009553	Switchgrass Rhizosphere	MRIEVERQLRTAHEPLSIVVGSDIWDLYVFGVTRVQRDWWVQIAAVGPRSCTVTVRVDAAKGRGVAAHEIVTLVSEWLLEGDPSDHAFLEHPGVERRAS*
Ga0105249_127440562	3300009553	Switchgrass Rhizosphere	LSIVVGGDIWDLYVFGVTRVERDWWVQIAVVGPRSCTVTVRVDASHGRGAAAHEIIRLVTDWLLEDETSDHAFLEHDVLEARAS*
Ga0105855_10143382	3300009649	Permafrost Soil	MHIEAERQLRTSHEPLSIVVNEDIWDLYVFGVTRVQRDWWVQIAVVGPRACTVTVRVDSTSGRGAAAHEIIRLVTEWLLEDDATDHAYLEYAPLEARAS*
Ga0105854_10680512	3300009660	Permafrost Soil	MEAEMRMETERQLRTTHEPLSIIVNDDVWDLYVYGVTRVQSDWWVQMAVVGSRACTVTVRVNSAGGRGAAAHDIVRLVTEWLMEDETSDHAFLEHAPLEARAS*
Ga0105858_11871321	3300009661	Permafrost Soil	MEAEMHIDVERKLRTTHEPLSIVVNEDIWDLYVYGVTRVQSDWWVQLAVVGPRACTVTVRVNSAGGRGAAAHEIIKLVSDWILEDDRSDHAFLEYASLERAS*
Ga0134124_101697852	3300010397	Terrestrial Soil	MRIEVERQLRTAHEPLSIIVDSDIWDLYVFGVTRVQRDWWVQIALVGPRSCTVTVRVDSAMGRASAAHEIVKLVREWLLAGDVTDHAFLEHPGVEARAS*
Ga0134122_115158072	3300010400	Terrestrial Soil	MRIEVERQLRTAHEPLSIIVGSDIWDLYVFGVTRVQRDWWVQIALVGPRSCTVTVRVDSARGRASAAHEIVKLVREWLLEGDGSDHAFLEHPALEARAS*
Ga0126350_120321492	3300010880	Boreal Forest Soil	MEAEMHLDVERRLRTAHEPLSISVNHDTWDLYVFGVTRVQRDWWVQIAVVGPRACTVTVRVDGANGRGAAAHEIIRLVTEWLLEDDASDHVFLEHAPLEARAS*
Ga0151489_16215332	3300011106	Soil	LEVEMHMDAERQLRTAHEPLSIVVNDDTWDLYVFGVTRVQRDWWVQIAVVGPRACTVTVRVDAANGRGAAAHEIITLVTAWLLEDDARDHAYLEHAPLEARAS*
Ga0105246_112035191	3300011119	Miscanthus Rhizosphere	GRRGRSPLSIVAGGDIWDLYVFGVTRVERDWWVQIAVVGPRSCTVTVRVDGANGRGAAAHEIIRLVTDWLLEDETSDHAFLEHAILEARAS*
Ga0150985_1089140422	3300012212	Avena Fatua Rhizosphere	MHIEVERQLRSAHEPLSIVVAGDVWDLYVFGVTRVERDWWVQIAVVGPRACTVTVRVDSANGRSAAAHQIVTLVTAWLLEDDASEHVFLEHPSLEARAS*
Ga0150985_1094529582	3300012212	Avena Fatua Rhizosphere	SIVVNSDIWDLYVFGVTRVQRDWWVQIAVVGPRACTVTVRVDSAPGRGVAARQIIKLVTAWLLENHSSHHAFLEHPGLDARAS*
Ga0150985_1105163482	3300012212	Avena Fatua Rhizosphere	MHEPLSIVVADETWDLYVFDVTRVNADWWVQLAVVGPRCGKGTVRVDAANGRGAAAHEILKLVTGWLRDDDRSEHALLEQHGPEARAS*
Ga0150985_1131768442	3300012212	Avena Fatua Rhizosphere	MEAEMHIEVERELRVAHEPLALVVGDDVWDLYVFGVTRVHRDFWVQIAVVGPRSCTVTVRVDAANGRSVAAHEIVTLVRAWLLTDDGRDHAFLEHPSLEARAS*
Ga0150985_1158053412	3300012212	Avena Fatua Rhizosphere	AGDETWDLYVIDVTRVHADWWVQLAVVGPRCGKVTVRVDAANGRGAAAHEILRLVTGWLKDEERSDHALLEQHEVETRAS*
Ga0150985_1200914812	3300012212	Avena Fatua Rhizosphere	MQLDVERQLRTAHEPLSILVGSNIWDLYVFGVTRVHRDWWVQIAVVGQRACTVTVRVDSARGRGAAAREIVKLVTAWLLEDTSSDHAFLEHPDLEARAS*
Ga0150984_1032367771	3300012469	Avena Fatua Rhizosphere	EPLSLVVAGDVWDLYVFGVTRVQRDWWVQIAVVGPRACTVTVRVDSANGRSAAAHHIVTLVTAWLLEDDASEHVFLEHPSLEARAS*
Ga0150984_1079697492	3300012469	Avena Fatua Rhizosphere	MHEPLSIVAGDETWDLYVIDVTRVHADWWVQLAVVGPRCGKVTVRVDAANGRGAAAHEILRLVTGWLKDEERSDHALLEQHEVETRAS*
Ga0150984_1214494901	3300012469	Avena Fatua Rhizosphere	SFCHSLATPAKSKRTLEAEMHEPLSIVVADETWDLYVFDVTRVNADWWVQLAVVGPRCGKVTVRVDAANGRGAAAHEILKLVTGWLRDDDRSEHALLEQHGPEARAS*
Ga0150984_1236749542	3300012469	Avena Fatua Rhizosphere	EAEMHIDVERQLRTTHEPLSIVVNSDIWDLYVFGVTRVQRDWWVQIAVVGPRACTVTVRVDSAPGRGVAARQIIKLVTAWLLENHSSHHAFLEHPGLDARAS*
Ga0137398_108222002	3300012683	Vadose Zone Soil	MEAEMHIDVEQQLRSAHEPLSIIVNDDTWDLYVFGVTRVQRDWWVQIAVVGPRACTVTVRVDAAKGRGAAAHEIIRLVSEWLLEDDASDHVLLEHAPLEAQAS*
Ga0137404_107998001	3300012929	Vadose Zone Soil	MEAEMHIDVERQLRSAHEPLSIIVNDDTWDLYVFGVTRVQRDWWVQIAVVGPRACTVTVRVDAAKGRGAAAHEIIRLVTAWLLDNDASDHAFLEDPALEARAS*
Ga0137407_116094071	3300012930	Vadose Zone Soil	TAHEPLSIIVNDDTWDLYVFGVTRVQRDWWVQIAVVGPRACTVTVRVDAAKGRGAAAHEIIRLVSEWLLEDDASDHVLLEHAPLEAQAS*
Ga0137407_122777002	3300012930	Vadose Zone Soil	MRIEVERQLRTAHEPLSIVVGSDIWDLYVFGVTRVQHDWWVQIAAVGPRSCTVTVRVDSAKGRAAAAHEIVRLVKDWLLEGDGSDHAFLEHPG
Ga0163162_120048041	3300013306	Switchgrass Rhizosphere	MEAEMHLDVERQLRTTHEPLSIVVGGDIWDLYVFGVTRVERDWWVQIAVVGPRSCTVTVRVDGANGRGAAAHEIIRLVTDWLHEDETSDHAFLEHDVLEARAS*
Ga0163162_128847851	3300013306	Switchgrass Rhizosphere	MRIEVERQLRTAHEPLSIVVGSDIWDLYVFGVTRVQHDWWVQIVAVGPRSCTVTVRVGAAKGRGAAAHEIVGLVRDWLLAGGVCDHAFLERSGVDAQACCLLVRDL
Ga0163162_130112761	3300013306	Switchgrass Rhizosphere	MRIEVERQLRTAHEPLSIIVGSDIWDLYVFGVTRVQRDWWVQIALVGPRSCTVTVRVDSAGGRASAAHEIVKLVREWLLEGDVTDHAFLEHPGGEARAS*
Ga0157375_112431412	3300013308	Miscanthus Rhizosphere	MEAEMHLDVERQLRTTHEPLSIVVGGDIWALYVFGVTRVERDWWVQIAVVGPRSCTVTVRVDGANGRGAAAHEIIRLVTDWLLEDETSDHAFLEHAILEARAS*
Ga0157375_118933912	3300013308	Miscanthus Rhizosphere	MEAEMHLDVERQLRTAHEPLSIVVGGDVWDLYVFGVTRVGRDWWVQIAIVGPRSCTVTVRVDAAHGRGAAAHDIIRLVTEWLLEDETSDHAF
Ga0163163_100064072	3300014325	Switchgrass Rhizosphere	MRAVEQDMEAEMHLDVERQLRTTHEPLSIVVGGEIWDLYVFGVTRVERDWWVQIAVVGPRACTVTVRVDAANGRGAAAHEIIRLVTDWLLEDEASEHAFLEHSVLEARAS*
Ga0163163_103421832	3300014325	Switchgrass Rhizosphere	MEAEMHLDVERQLRTTHEPLSIVVGGDIWDLYVFGVTRVERDWWVQIAVVGPRSCTVTVRVDGANGRGAAAHEIIRLVTDWLLEDETSDHAFLEHAILEARAS*
Ga0182019_104141312	3300014498	Fen	VRASHEPLSIVVNDDIWDLYVYGVTRVQSDWWVQMAVVGPRACTVTVRVSSASGRGAAAHQIVRLVTEWLLGDDAEDHAFLEHAPLEARAS*
Ga0157377_102136281	3300014745	Miscanthus Rhizosphere	MRSVETDMEAEMHLDVERQLRTTHEPLSIVVGGDIWDLYVFGVTRVERDWWVQIAVVGPRSCTVTVRVDGANGRGAAAHEIIRLVTDWLLEDETSDHAFLEHAILEARAS*
Ga0157379_103568211	3300014968	Switchgrass Rhizosphere	PTCPESKSILEAEMRIEVERQLRTAHEPLSIVVGSDIWDLYVFGVTRVQHDWWVQIVAVGPRSCTVTVRVGAAKGRGAAAHEIVGLVRDWLLEGEVCDHAFLERPGVEAQAC*
Ga0157376_101426392	3300014969	Miscanthus Rhizosphere	LSILVGSDIWDLYVFGVTRVHRDWWVQIAVVGPRACTVTVRVDSAAGRGAAAHEIIKLVTAWLLEDHSSDHAFLEHPRLEARAS*
Ga0137409_112679001	3300015245	Vadose Zone Soil	MEAEMHIDVERQLRSAHEPLSIIVNDDTWDLYVFGVTRVQRDWWVQIAVVGPRACTVTVRVDAAKGRGAAAHEIIRLVSEWLLEDDASDHVLLEHA
Ga0132258_117890092	3300015371	Arabidopsis Rhizosphere	MQLDVERQLRTAHEPLSILVGSDIWDLYVFGVTRVHRDWWVQIAVVGPRACTVTVRVDSAGGRGAAAHEIIKLVTAWLLEDRSSDHAFLEHPRLEARAS*
Ga0132257_1037296501	3300015373	Arabidopsis Rhizosphere	QLRTAHEPLSIVVGGDVWDLYVFGVTRVGRDWWVQIAVVGPRSCTVTVRVDAAHGRGAAAHDIIRLVTDWLLEDETSDHAFLEHSVLELRAS*
Ga0132255_1044289472	3300015374	Arabidopsis Rhizosphere	GGDVWDLYVFGVTRVGRDWWVQIAVVGPRSCTVTVRVDAAHGRGAAAHDIIRLVTDWLLEDETSDHAFLEHSVLELRAS*
Ga0132255_1055519051	3300015374	Arabidopsis Rhizosphere	MQLDVERQLRTSHEPLSILVGSDIWDRYVFGVTRVHRDWWVQIAVVGPRACTVTVRVDSAGGRGAAAHEIIKLVTAWLLEDRSSDHAFLEHPRLEARAS*
Ga0182039_110366731	3300016422	Soil	HEPLSILVGTDIWDLYVFGVTRVHRDWWVQIAVVGPRACTVTVRVDSAGGRAAAAHEIIKLVTAWLLEDTSSDHAFLEHPGLEARAS
Ga0182038_116426931	3300016445	Soil	RVLEAEMQLDVERQLRTTHEPLSILVGTDIWDLYVFGVTRVHRDWWVQIAVVGPRACTVTVRVDSAGGRAAAAHEIIKLVTAWLLEDTSSDHAFLEHPGLEARAS
Ga0163161_116687452	3300017792	Switchgrass Rhizosphere	PTCPESKSILEAEMRIEVERQLRTAHEPLSIIVGSDIWDLYVFGVTRVQRDWWVQIALVGPRSCTVTVRVDSARGRASAAHEIVKLVREWLLAGDVTDHAFLEHPGVEARAS
Ga0193728_10886711	3300019890	Soil	MRKEVEGEGTSLQPLPIAIGKDTWDVYVFGVTRVQHDWFVQMAIVGPRACMATARVDASGGRAAAAREIIRLVREWLLEDDLSDHAFLEREGNMARAC
Ga0193728_12949432	3300019890	Soil	MHIDVERQLRTAHEPLSIIVNDDTWDLYVFGVTRVQRDWWVQIAVVGRRACTVTVRVDAARGRGAAAHEIIKLVSEWLCEDDGSDHAFLEHAPLEARAS
Ga0207642_102002102	3300025899	Miscanthus Rhizosphere	MRIEVERQLRTAHEPLSIIVGSDIWDLYVFGVTRVQRDWWVQIALVGPRSCTVTVRVDSARGRASAAHEIVKLVREWLLEGDVTDHAFLEHPGVEARAS
Ga0207710_101995442	3300025900	Switchgrass Rhizosphere	MHLDVERQLRTTHEPLSIVVGGEIWDLYVFGVTRVERDWWVQIAVVGPRSCTVTVRVDAANGRGAAAHEIIRLVTDWLLEDEASDHAFLEHSVLEARAS
Ga0207680_108802592	3300025903	Switchgrass Rhizosphere	MRIEVERQLRTAHEPLSIVVGSDIWDLYVFGVTRVQHDWWVQIVAVGPRSCTVTVRVGAAKGRGAAAHEIVGLVRDWLLEGEVCDHAFLERPGVEAQAC
Ga0207643_104454741	3300025908	Miscanthus Rhizosphere	EPLSIVVGGDIWDLYVFGVTRVERDWWVQIAVVGPRSCTVTVRVDAANGRGAAAHEIIRLVTDWLLEDETSDHAFLEHDVLEARAS
Ga0207654_105367892	3300025911	Corn Rhizosphere	MQLDVERQLRTAHEPLSILVGSDIWDLYVFGVTRVHRDWWVQIAVVGPRACTVTVRVDSAAGRGAAAHEIIKLVTAWLLEDHS
Ga0207649_107034172	3300025920	Corn Rhizosphere	MHLDVERQLRTTHEPLSIVVGGEIWDLYVFGVTRVERDWWVQIAVVGPRSCTVTVRVDAANGRGAAAHEIIRLVTDWLLEDEVSE
Ga0207681_107303902	3300025923	Switchgrass Rhizosphere	MHLDVERQLRTTHEPLSIVVGGDIWDLYVFGVTRVERDWWVQIAVVGPRSCTVTVRVDAANGRGAAAHEIIRLVTDWLLEDETSDHAFLEHAILEARAS
Ga0207650_101747032	3300025925	Switchgrass Rhizosphere	GDIWDLYVFGVTRVERDWWVQIAVVGPRSCTVTVRVDGANGRGAAAHEIIRLVTDWLLEDETSDHAFLEHAILEARAS
Ga0207650_106125302	3300025925	Switchgrass Rhizosphere	MHLDVERQLRITHEPLSIVVGGDIWDLYVFGVTRVERDWWVQIAVVGPRSCTVTVRVDAANGRGAAAHEIIRLVTDWLLEDETSDHAFLEHPVLEARAS
Ga0207659_109464261	3300025926	Miscanthus Rhizosphere	MHLDVERQQRTTHEPLSIVVGGDIWDLYVFGVTRVARDWWVQIAVVGPRSCTVTVRVDAAHGRGAAAHEIIRLVTDWLLEDET
Ga0207704_116054521	3300025938	Miscanthus Rhizosphere	VPPTRTESKPILEAEMRIEVERQLRTAHEPLSIVVGSDIWDLYVFGVTRVQHDWWVQIVAVGPRSCTVTVRVGAAKGRGAAAHEIVGLVRDWLLEGEVCDHAFLERPGVEAQAC
Ga0207711_100653113	3300025941	Switchgrass Rhizosphere	MHLDVERQLRTTHEPLSIVVGGEIWDLYVFGVTRVERDWWVQIAVVGPRACTVTVRVDAANGRGAAAHEIIRLVTDWLLEDEASDHAFLEHSVLEARAS
Ga0207689_103494662	3300025942	Miscanthus Rhizosphere	MRIEVERQLRTAHEPLSIVVGSDIWDLYVFGVTRVQRDWWVQIAVVGPRACTVTVRVDAARGRGAAAHEIIRLVTEWLLEDDASDHVLLEHAPLEARAS
Ga0207651_107683361	3300025960	Switchgrass Rhizosphere	IIVDSDIWDLYVFGVTRVQRDWWVQIALVGPRSCTVTVRVDSAMGRASAAHEIVKLVREWLLEGDVTDHAFLEHPGVEARAS
Ga0207712_113432411	3300025961	Switchgrass Rhizosphere	MRIEVERQLRTAHEPLSIVVGSDIWDLYVFGVTRVQRDWWVQIAAVGPRSCTVTVRVDAAKGRGVAAHEIVTLVSEWLLEGDPSDHAFLEHPGVERRAS
Ga0207712_117989901	3300025961	Switchgrass Rhizosphere	GGDIWDLYVFGVTRVERDWWVQIAVVGPRSCTVTVRVDAANGRGAAAHEIIRLVTDWLLEDETSDHAFLEHDVLEARAS
Ga0207658_120191501	3300025986	Switchgrass Rhizosphere	YSGRIRQSLFTPLPRPPHMRSVERDMEAEMHLDVERQLRTTHEPLSIVVGGDIWDLYVFGVTRVVRDWWVQIAVVGPRSCTVTVRVDASHGRGAAAHEIIRLVTDWLLEDETSDHAFLEHDVLEARAS
Ga0207677_113813152	3300026023	Miscanthus Rhizosphere	MHLDVERQLRTTHEPLSIVVGGDIWDLYVFGVTRVERDWWVQIAVVGPRSCTVTVRVDGANGRGAAAHEIIRLVTDWLLEDETSDHAFLEHAI
Ga0207703_100965152	3300026035	Switchgrass Rhizosphere	MHLDVERQLRTTHEPLSIVVGGEIWDLYVFGVTRVERDWWVQIAVVGPRACTVTVRVDAANGRGAAAHEIIRLVTDWLLEDEASEHAFLEHSLLEARAS
Ga0207703_111016602	3300026035	Switchgrass Rhizosphere	MRIEVERQLRTAHEPLSIVVGSDIWDLYVFGVTRVQHDWWVQIVAVGPRSCTVTVRVGAAKGRGAAAHEIVGLVRDWLLEGEVCDHA
Ga0207639_103773702	3300026041	Corn Rhizosphere	MRIEVERQLRSTPEPLSIFVGDDIWDLYVFGVTRVARDWWVQIAVVGPRSCTVTVRVDAANGRGAAAHQIIKLVSDWLIADETADHVLLEHPSLAARAS
Ga0207648_104979151	3300026089	Miscanthus Rhizosphere	MHLDVERQLRTTHEPLSIVVGGDIWDLYVFGVTREERDWWVQIAVVGPRSCTVTVRVDAANGRGAAAHEIISLVTDWLLEDETSGHAFLEHSVLEARAS
Ga0207676_100453842	3300026095	Switchgrass Rhizosphere	MHLDVERQLRTTHEPLSIVVGGEIWDLYVFGVTRVERDWWVQIAVVGPRACTVTVRVDAANGRGAAAHEIIRLVTDWLLEDEASEHAFLEHSVLEARAS
Ga0209855_10078742	3300026220	Permafrost Soil	MHIEAERQLRTSHEPLSIVVNEDIWDLYVFGVTRVQRDWWVQIAVVGPRACTVTVRVDSTSGRGAAAHEIIRLVTEWLLEDDATDHAYLEYAPLEARAS
Ga0207981_11116022	3300027560	Soil	VETDMEAEMHFDVERQLRTTHEPLSIAVGSNIWDLYVFGVTRVQRDWWVQIVVVGPRACTVTVRVDSASGRGAAAHEIIKLVTAWLLEDDTSDHAFLEHPGLRARAS
Ga0209813_103749022	3300027866	Populus Endosphere	MHIEVDRQLRVEHEPLSIVVGDDLWDLYVFGVTRIQHDWWVQIAVVGPRSCTVTVRVDSAQGRGAAAHQIVALISAWLLEDDASDHAFLEHGSVERRAS
Ga0209068_109603931	3300027894	Watersheds	RQRFFTVLPRHVHTLTVETAMEAEMHLDVERQLRTAHEPLSIIVNDDIWDLYVFGVTRVQRDWWVQIAVVGPRACTVTVRVDAAHGRGAAAREIIRLVTEWLLEDDASDHAFLEHAPLEARAS
Ga0209069_103035502	3300027915	Watersheds	MHIDVERQLRTAHEPLSIVVGSDIWDLYVFGVTRVQRDWWVQIAVVGPRACTVTVRVDSARGRASAAHEIVKLVKDWLLEGDASDHAFLEHPTLEARAS
Ga0268265_121886871	3300028380	Switchgrass Rhizosphere	MHLDVERQLRTTHEPLSIVVGGDIWDLYVFGVTRVERDWWVQIAVVGPRSCTVTVRVDAANGRGAAAHEIIRLVVDWLLEDETSDHAF
Ga0268264_101517912	3300028381	Switchgrass Rhizosphere	MHLDVERQQRTTHEPLSIVVGGDIWDLYVFGVTRVERDWWVQIAVVGPRSCTVTVRVDASHGRGAAAHEIIRLVTDWLLEDETSDHAFLEHDVLEARAS
Ga0268264_105870932	3300028381	Switchgrass Rhizosphere	MRIEVERQLRTAHEPLSIVVGSDIWDLYVFGVTRVQRDWWVQIAAVGPRSCTVTVRVDAAKGRGAAAHEIVTLVSEWLLEGDPSDHAFLEHPGVERRAS
Ga0268264_121476132	3300028381	Switchgrass Rhizosphere	MHIDVERQLRTAHEPLAVVVNDEIWDLYVFGVTKVLRDWWVQIVVVGSRVCTVTVRVDSSSGRGAAAHEIIKLVTAWLRENDSSE
Ga0307280_102392631	3300028768	Soil	MRIDVERQLRTAHEPLSIVVGDDIWDLYVFGVTRVQRDWWVQIAAVGPRSCTVTVRVDSAKGRGAAAHEIVRLITAWLLENDPSDHAFLEHPRLQARAS
Ga0307280_102844372	3300028768	Soil	MHIDVERQLRSAHEPLSIIVNDDTWDLYVFGVTRVQRDWWVQIAVVGPRACTVTVRVDAAKGRGAAAHEIIRLVTEWLLEDDASDHVLLEHAPLEA
Ga0307506_102186622	3300031366	Soil	KMHEPLSILVGDDIWDLYVFAVTRVAGDWWVQMAVVGPRACRVTVRVDASSGRGAAAHQIVRLVTDWLSTGDEHGHAFLEDPALEARAS
Ga0318538_101418662	3300031546	Soil	MQLDVERQLRTAHEPLSILVGTDIWDLYVFGVTRVHRDWWVQIAVVGPRACTVTVRVDSAGGRAAAAHEIIKLVTAWLLEDTSSDHAFLEHPGLEARAS
Ga0318558_106378211	3300032044	Soil	TAHEPLSILVGTDIWDLYVFGVTRVHRDWWVQIAVVGPRACTVTVRVDSAGGRAAAAHEIIKLVTAWLLEDTSSDHAFLEHPGLEARAS
Ga0318533_109017662	3300032059	Soil	LVGTDIWDLYVFGVTRVHRDWWVQIAVVGPRACTVTVRVDSAGGRAAAAHEIIKLVTAWLLEDTSSDHAFLEHPGLEARAS
Ga0318504_104170452	3300032063	Soil	SILVGTDIWDLYVFGVTRVHRDWWVQIAVVGPRACTVTVRVDSAGGRAAAAHEIIKLVTAWLLEDTSSDHAFLEHPGLEARAS
Ga0307472_1019272371	3300032205	Hardwood Forest Soil	MHRVETVMEAEMHIDVERQLRTAHEPLSIVVGPDTWDLYVFGVTRVQRDWWVQIAAVGPRACTVTVRVDSAGGRGAAARDIVKLVTRWLQEDDGCDHAFLEHPSLEARAS
Ga0372943_0042046_2179_2445	3300034268	Soil	MHEPLSIVVGEETWDLYVFDVTRVHTDWWVQLAVVGPRCGKVTVRVDAANGRGAAAHEILKLVTAWLRDDERRDHTLLEQHEAEARAS
Ga0372943_0698308_258_524	3300034268	Soil	MHEPLSILVGDDIWDLYVFGVTRVQRDWWVQMAVVGPRACRVTVRVDSSTGRGAAAHEIVTLVSNWLLQDETSDHVFLEQTTLEARAS
Ga0372943_1113897_266_526	3300034268	Soil	MHEPLSIVVADETWDLYVFDVTRVNADWWVQLAVVGPRCGKVTVRVDAGNGRGAAAHEILRLVTGWLKDDERGDHALLEQHEPHARA

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.75
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.75
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F054388

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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