Metagenome / Metatranscriptome Family F054384

Basic Information
Family ID	F054384
Family Type	Metagenome / Metatranscriptome
Number of Sequences	140
Average Sequence Length	68 residues
Representative Sequence	MHKPYLHIPTAEERCIVRAWTWRVLIIYGAFVLTAFGVVSLGQHFGQGSKDLIAADVRALTSGRN
Number of Associated Samples	134
Number of Associated Scaffolds	140

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	82.14 %
% of genes near scaffold ends (potentially truncated)	30.00 %
% of genes from short scaffolds (< 2000 bps)	91.43 %
Associated GOLD sequencing projects	125
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Unclassified (52.143 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (25.000 % of family members)
Environment Ontology (ENVO)	Unclassified (37.857 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (45.714 % of family members)

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 70.77% β-sheet: 0.00% Coil/Unstructured: 29.23%
Feature Viewer

Powered by Feature Viewer

Pfam ID	Name	% Frequency in 140 Family Scaffolds
PF00893	Multi_Drug_Res	10.71
PF03401	TctC	2.86
PF04392	ABC_sub_bind	2.86
PF13417	GST_N_3	0.71
PF13586	DDE_Tnp_1_2	0.71
PF08042	PqqA	0.71
PF14347	DUF4399	0.71
PF13384	HTH_23	0.71
PF01047	MarR	0.71
PF12146	Hydrolase_4	0.71
PF00353	HemolysinCabind	0.71
PF05036	SPOR	0.71

COG ID	Name	Functional Category	% Frequency in 140 Family Scaffolds
COG2076	Multidrug transporter EmrE and related cation transporters	Defense mechanisms [V]	10.71
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	2.86
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	2.86

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.14 %
All Organisms	root	All Organisms	47.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.14 %
cellular organisms	root	All Organisms → cellular organisms	47.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.14 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	47.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.14 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	43.57 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.14 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	42.14 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.14 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	20.00 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	2.14 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.14 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	11.43 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	3.57 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.14 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.14 %
Hyphomicrobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	3.57 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.86 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.14 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.14 %
unclassified Hyphomicrobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → unclassified Hyphomicrobium	3.57 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.86 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.14 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.14 %
Hyphomicrobium sp. SCN 65-11	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → unclassified Hyphomicrobium → Hyphomicrobium sp. SCN 65-11	3.57 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.86 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.14 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.71 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2199352025\|deepsgr__Contig_188407	All Organisms → cellular organisms → Bacteria → Proteobacteria	1767	Open in IMG/M
3300001686\|C688J18823_10705760	Not Available	642	Open in IMG/M
3300002568\|C688J35102_120266687	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	958	Open in IMG/M
3300004114\|Ga0062593_100042063	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2751	Open in IMG/M
3300005159\|Ga0066808_1013012	Not Available	765	Open in IMG/M
3300005163\|Ga0066823_10008748	Not Available	1396	Open in IMG/M
3300005169\|Ga0066810_10198028	Not Available	504	Open in IMG/M
3300005328\|Ga0070676_11010462	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	625	Open in IMG/M
3300005332\|Ga0066388_107208154	Not Available	559	Open in IMG/M
3300005339\|Ga0070660_101873564	Not Available	511	Open in IMG/M
3300005354\|Ga0070675_101912582	Not Available	547	Open in IMG/M
3300005355\|Ga0070671_100574781	Not Available	973	Open in IMG/M
3300005356\|Ga0070674_100340206	Not Available	1209	Open in IMG/M
3300005367\|Ga0070667_100628231	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	991	Open in IMG/M
3300005436\|Ga0070713_101837736	Not Available	588	Open in IMG/M
3300005438\|Ga0070701_10787362	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	647	Open in IMG/M
3300005444\|Ga0070694_101008865	Not Available	691	Open in IMG/M
3300005456\|Ga0070678_100078886	Not Available	2488	Open in IMG/M
3300005458\|Ga0070681_11615761	Not Available	574	Open in IMG/M
3300005459\|Ga0068867_101306307	Not Available	670	Open in IMG/M
3300005466\|Ga0070685_10562439	Not Available	816	Open in IMG/M
3300005539\|Ga0068853_102286166	Not Available	524	Open in IMG/M
3300005543\|Ga0070672_101582611	Not Available	588	Open in IMG/M
3300005544\|Ga0070686_101016255	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	681	Open in IMG/M
3300005549\|Ga0070704_100976127	Not Available	765	Open in IMG/M
3300005564\|Ga0070664_100249494	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1595	Open in IMG/M
3300005718\|Ga0068866_10299488	All Organisms → cellular organisms → Bacteria	1004	Open in IMG/M
3300005764\|Ga0066903_101718940	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1195	Open in IMG/M
3300005841\|Ga0068863_101971185	Not Available	594	Open in IMG/M
3300005843\|Ga0068860_100455143	Not Available	1273	Open in IMG/M
3300005844\|Ga0068862_100632329	Not Available	1031	Open in IMG/M
3300005937\|Ga0081455_10022110	All Organisms → cellular organisms → Bacteria	5952	Open in IMG/M
3300006038\|Ga0075365_10190756	All Organisms → cellular organisms → Bacteria	1434	Open in IMG/M
3300006048\|Ga0075363_100525961	Not Available	704	Open in IMG/M
3300006051\|Ga0075364_10073555	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2253	Open in IMG/M
3300006163\|Ga0070715_10316936	Not Available	840	Open in IMG/M
3300006358\|Ga0068871_100315177	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1376	Open in IMG/M
3300009092\|Ga0105250_10382665	Not Available	621	Open in IMG/M
3300009098\|Ga0105245_10459858	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1283	Open in IMG/M
3300009147\|Ga0114129_12441975	Not Available	626	Open in IMG/M
3300009156\|Ga0111538_10475479	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → unclassified Hyphomicrobium → Hyphomicrobium sp. SCN 65-11	1584	Open in IMG/M
3300009156\|Ga0111538_11711312	Not Available	792	Open in IMG/M
3300009176\|Ga0105242_11467301	Not Available	712	Open in IMG/M
3300009177\|Ga0105248_10828408	Not Available	1044	Open in IMG/M
3300009545\|Ga0105237_11382375	Not Available	710	Open in IMG/M
3300010159\|Ga0099796_10171265	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	866	Open in IMG/M
3300010373\|Ga0134128_12258629	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	599	Open in IMG/M
3300011000\|Ga0138513_100023952	Not Available	858	Open in IMG/M
3300011119\|Ga0105246_10446206	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1086	Open in IMG/M
3300011412\|Ga0137424_1136284	Not Available	519	Open in IMG/M
3300012685\|Ga0137397_10880152	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	664	Open in IMG/M
3300012915\|Ga0157302_10276418	Not Available	641	Open in IMG/M
3300012924\|Ga0137413_10583725	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	834	Open in IMG/M
3300012938\|Ga0162651_100005947	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1355	Open in IMG/M
3300012939\|Ga0162650_100000366	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3683	Open in IMG/M
3300012951\|Ga0164300_10754432	Not Available	597	Open in IMG/M
3300012955\|Ga0164298_10404355	Not Available	883	Open in IMG/M
3300012955\|Ga0164298_10962931	Not Available	627	Open in IMG/M
3300012984\|Ga0164309_11498637	Not Available	577	Open in IMG/M
3300012986\|Ga0164304_10049776	All Organisms → cellular organisms → Bacteria	2275	Open in IMG/M
3300012988\|Ga0164306_10942480	Not Available	707	Open in IMG/M
3300012989\|Ga0164305_10873250	Not Available	753	Open in IMG/M
3300013296\|Ga0157374_10977265	Not Available	865	Open in IMG/M
3300013297\|Ga0157378_10818552	Not Available	958	Open in IMG/M
3300013306\|Ga0163162_11154644	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	878	Open in IMG/M
3300014968\|Ga0157379_12374500	Not Available	529	Open in IMG/M
3300014969\|Ga0157376_10359398	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1396	Open in IMG/M
3300015242\|Ga0137412_10670078	Not Available	776	Open in IMG/M
3300015373\|Ga0132257_101844655	Not Available	777	Open in IMG/M
3300017965\|Ga0190266_10882027	Not Available	585	Open in IMG/M
3300018027\|Ga0184605_10005432	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4605	Open in IMG/M
3300018027\|Ga0184605_10106858	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1239	Open in IMG/M
3300018028\|Ga0184608_10445393	Not Available	558	Open in IMG/M
3300018031\|Ga0184634_10048590	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → unclassified Hyphomicrobium → Hyphomicrobium sp. SCN 65-11	1746	Open in IMG/M
3300018051\|Ga0184620_10049826	Not Available	1174	Open in IMG/M
3300018054\|Ga0184621_10113496	Not Available	965	Open in IMG/M
3300018055\|Ga0184616_10106221	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1006	Open in IMG/M
3300018061\|Ga0184619_10058081	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1693	Open in IMG/M
3300018061\|Ga0184619_10079663	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1453	Open in IMG/M
3300018067\|Ga0184611_1008542	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2831	Open in IMG/M
3300018067\|Ga0184611_1098545	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1014	Open in IMG/M
3300018071\|Ga0184618_10402764	Not Available	579	Open in IMG/M
3300018073\|Ga0184624_10218808	Not Available	851	Open in IMG/M
3300018076\|Ga0184609_10196988	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	938	Open in IMG/M
3300018077\|Ga0184633_10045399	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2230	Open in IMG/M
3300018082\|Ga0184639_10074266	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1780	Open in IMG/M
3300019362\|Ga0173479_10899622	Not Available	501	Open in IMG/M
3300019767\|Ga0190267_10109668	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1118	Open in IMG/M
3300019867\|Ga0193704_1051227	Not Available	807	Open in IMG/M
3300019996\|Ga0193693_1035592	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	851	Open in IMG/M
3300020001\|Ga0193731_1166692	Not Available	531	Open in IMG/M
3300020002\|Ga0193730_1034200	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1473	Open in IMG/M
3300020016\|Ga0193696_1048126	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1127	Open in IMG/M
3300021363\|Ga0193699_10202509	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	824	Open in IMG/M
3300021510\|Ga0222621_1045752	Not Available	914	Open in IMG/M
3300021951\|Ga0222624_1451257	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1021	Open in IMG/M
3300022694\|Ga0222623_10161461	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	872	Open in IMG/M
3300022889\|Ga0247785_1050591	Not Available	525	Open in IMG/M
3300025901\|Ga0207688_10155856	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1352	Open in IMG/M
3300025927\|Ga0207687_11170933	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	661	Open in IMG/M
3300025933\|Ga0207706_10291314	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1423	Open in IMG/M
3300025934\|Ga0207686_10341913	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1124	Open in IMG/M
3300025940\|Ga0207691_10428092	Not Available	1127	Open in IMG/M
3300025945\|Ga0207679_10238109	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1541	Open in IMG/M
3300025986\|Ga0207658_11260417	Not Available	676	Open in IMG/M
3300026067\|Ga0207678_10091513	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2600	Open in IMG/M
3300026075\|Ga0207708_10071755	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2653	Open in IMG/M
3300026088\|Ga0207641_10973137	Not Available	845	Open in IMG/M
3300026142\|Ga0207698_10588609	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1095	Open in IMG/M
3300027669\|Ga0208981_1066939	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	915	Open in IMG/M
3300027903\|Ga0209488_10428750	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	976	Open in IMG/M
3300027909\|Ga0209382_10307374	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → unclassified Hyphomicrobium → Hyphomicrobium sp. SCN 65-11	1787	Open in IMG/M
3300028380\|Ga0268265_10537310	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1108	Open in IMG/M
3300028381\|Ga0268264_10863843	Not Available	906	Open in IMG/M
3300028589\|Ga0247818_11260370	Not Available	530	Open in IMG/M
3300028708\|Ga0307295_10190387	Not Available	579	Open in IMG/M
3300028710\|Ga0307322_10024337	Not Available	1410	Open in IMG/M
3300028716\|Ga0307311_10145148	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	681	Open in IMG/M
3300028719\|Ga0307301_10022288	All Organisms → cellular organisms → Bacteria	1858	Open in IMG/M
3300028720\|Ga0307317_10088622	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1019	Open in IMG/M
3300028720\|Ga0307317_10112902	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	904	Open in IMG/M
3300028754\|Ga0307297_10400116	Not Available	507	Open in IMG/M
3300028778\|Ga0307288_10203973	Not Available	762	Open in IMG/M
3300028782\|Ga0307306_10158371	Not Available	633	Open in IMG/M
3300028784\|Ga0307282_10308260	Not Available	763	Open in IMG/M
3300028790\|Ga0307283_10096861	Not Available	767	Open in IMG/M
3300028807\|Ga0307305_10071009	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1607	Open in IMG/M
3300028819\|Ga0307296_10018894	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3623	Open in IMG/M
3300028872\|Ga0307314_10031745	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1256	Open in IMG/M
3300028881\|Ga0307277_10055046	All Organisms → cellular organisms → Bacteria	1627	Open in IMG/M
3300028889\|Ga0247827_10947996	Not Available	581	Open in IMG/M
3300031184\|Ga0307499_10242427	Not Available	572	Open in IMG/M
3300031421\|Ga0308194_10364545	Not Available	518	Open in IMG/M
3300031562\|Ga0310886_10211711	Not Available	1064	Open in IMG/M
3300031720\|Ga0307469_12229070	Not Available	534	Open in IMG/M
3300031944\|Ga0310884_10885449	Not Available	550	Open in IMG/M
3300032205\|Ga0307472_100388202	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1163	Open in IMG/M
3300034150\|Ga0364933_030347	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → unclassified Hyphomicrobium → Hyphomicrobium sp. SCN 65-11	1317	Open in IMG/M
3300034151\|Ga0364935_0154400	Not Available	727	Open in IMG/M
3300034643\|Ga0370545_014887	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → unclassified Hyphomicrobium → Hyphomicrobium sp. SCN 65-11	1236	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	65.71%
Host-Associated	Host-Associated	34.29%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	51.43%
Plants	Host-Associated → Plants	34.29%
Aquatic	Environmental → Aquatic	14.29%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	47.86%
Rhizosphere	Host-Associated → Plants → Rhizosphere	20.71%
Sediment	Environmental → Aquatic → Sediment	13.57%
Rhizoplane	Host-Associated → Plants → Rhizoplane	10.71%
Roots	Host-Associated → Plants → Roots	2.86%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	2.14%
Floodplain	Environmental → Terrestrial → Floodplain	1.43%
Freshwater	Environmental → Aquatic → Freshwater	0.71%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	37.86%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	13.57%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	11.43%
Loam	Environmental → Terrestrial → Soil → Loam	10.00%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	9.29%
Soil	Host-Associated → Plants → Rhizosphere → Soil	9.29%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	2.14%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	2.14%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	1.43%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.71%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.71%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.71%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.71%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	32.14%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	13.57%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	11.43%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	9.29%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	9.29%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.43%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.86%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.14%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	2.14%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	2.14%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.43%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.43%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.43%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	1.43%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.71%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.71%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.71%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.71%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	25.00%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	11.43%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.29%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	4.29%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.57%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.57%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	3.57%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	3.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.86%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.86%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	2.14%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	2.14%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.14%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.14%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.43%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.43%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.43%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.43%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.43%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	1.43%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.43%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.43%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.43%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.71%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.71%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.71%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.71%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.71%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.71%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.71%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.71%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.71%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.71%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.71%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.71%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.71%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2199352025	Soil microbial communities from Rothamsted, UK, for project Deep Soil - DEEP SOIL	Environmental	Open in IMG/M
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300005159	Soil and rhizosphere microbial communities from Laval, Canada - mgLPB	Environmental	Open in IMG/M
3300005163	Soil and rhizosphere microbial communities from Laval, Canada - mgHMB	Environmental	Open in IMG/M
3300005169	Soil and rhizosphere microbial communities from Laval, Canada - mgHPA	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006038	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5	Host-Associated	Open in IMG/M
3300006048	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3	Host-Associated	Open in IMG/M
3300006051	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4	Host-Associated	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300009092	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300011000	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t6i015	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300011412	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT620_2	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012938	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t2i015	Environmental	Open in IMG/M
3300012939	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t1i015	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018031	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1	Environmental	Open in IMG/M
3300018051	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018055	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_90_coex	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018067	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coex	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018077	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b1	Environmental	Open in IMG/M
3300018082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b2	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300019767	Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 T	Environmental	Open in IMG/M
3300019867	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m1	Environmental	Open in IMG/M
3300019996	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3a2	Environmental	Open in IMG/M
3300020001	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a2	Environmental	Open in IMG/M
3300020002	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a1	Environmental	Open in IMG/M
3300020016	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3m1	Environmental	Open in IMG/M
3300021363	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3c2	Environmental	Open in IMG/M
3300021510	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_coex	Environmental	Open in IMG/M
3300021951	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300022889	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S096-311B-4	Environmental	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027669	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M1 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028589	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day1	Environmental	Open in IMG/M
3300028708	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_152	Environmental	Open in IMG/M
3300028710	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_380	Environmental	Open in IMG/M
3300028716	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_198	Environmental	Open in IMG/M
3300028719	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182	Environmental	Open in IMG/M
3300028720	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_357	Environmental	Open in IMG/M
3300028754	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_157	Environmental	Open in IMG/M
3300028778	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142	Environmental	Open in IMG/M
3300028782	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_193	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028790	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_122	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028872	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_204	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300028889	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day2	Environmental	Open in IMG/M
3300031184	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 13_S	Environmental	Open in IMG/M
3300031421	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031944	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300034150	Sediment microbial communities from East River floodplain, Colorado, United States - 25_j17	Environmental	Open in IMG/M
3300034151	Sediment microbial communities from East River floodplain, Colorado, United States - 2_s17	Environmental	Open in IMG/M
3300034643	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_120 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
deepsgr_03242950	2199352025	Soil	MHKPYRYIPTAEERCIVRAWTWRVLIIYGAFVLTAFGVVSLGQHFGQGSKDLIAADVRVLTSGSN
C688J18823_107057602	3300001686	Soil	MHKPYLHIPTAEERSIVRGWTLRVLIIYGAFVLTAFGVVSLGQHFGQGSKDLITADVRALTSGRN*
C688J35102_1202666871	3300002568	Soil	RCIVRAWTWRVLIIYGAFVLTAFGVVSLGQNFGQGSKDVIAADVRVLTSGSN*
Ga0062593_1000420635	3300004114	Soil	MHRPYLHIPTAEERCIVRGWTWRVLIIYGACVLTAFGVVSLGQHFDQGSKDVRTADVRALTSGRN*
Ga0066808_10130121	3300005159	Soil	MHKPYLHIPTAEERCIVRAWTWRVLIIYGAFVLTAFGVVSLGQNFGQGSKDLIADVRVLTSGSN*
Ga0066823_100087481	3300005163	Soil	MHKPYLHIPTAEERCIVRGWTWRVLIIYGAFVLTAFGVVSLGQNFGQGSKDLIAADVRVLTSGSN*
Ga0066810_101980281	3300005169	Soil	MHKPYRYIPTAEERCIVRAWTWRVLIIYGAFVLTAFGVVSLGQHFGQGSKDLIADVRVLTSGSN*
Ga0070676_110104621	3300005328	Miscanthus Rhizosphere	MHKPYRYIPTAEERCIVRAWTWRVLIIYGAFVLTAFGVVSLGQNFGQGSKDLIADVRVLTSGSN*
Ga0066388_1072081542	3300005332	Tropical Forest Soil	MHKPYLYIPTPEERCVVRSWAWHVLIIYGAFVLTAFGLVSLSQHSGQGSKDLIAAAVTAPTSDRNQATVKTHEAATTRLQTTP*
Ga0070660_1018735641	3300005339	Corn Rhizosphere	MHKPYRYIPTAEERCIVRAWTWRVLIIYGAFVLTAFGVVSLGQNFGQGSKDLIADVRV
Ga0070675_1019125822	3300005354	Miscanthus Rhizosphere	MHKPYRHIPTAEERCIVRAWTWRVLIIYGAFVLTAFGVVSLGQNFGQGSKDLIADVRVLTSGSN*
Ga0070671_1005747811	3300005355	Switchgrass Rhizosphere	MHKPYLHIPTAEERCVVGGWTWRVLIIYGAFVLTAFGVVSLGQNFGQGSKDLIAADVRVLTSGSN*
Ga0070674_1003402062	3300005356	Miscanthus Rhizosphere	MHKPYLHIPTAEERCIVRAWTWRVLIIYGAFVLTAFGVVSLGQHFGQGSKDLIAADVRVLTSGSN*
Ga0070667_1006282311	3300005367	Switchgrass Rhizosphere	MHKPYRYIPTAEERCIVRGWTWRVLIIYGAFVLTAFGVVSLGQHFSQGSKDLIAADVRVLTSGRN*
Ga0070713_1018377362	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MHKPYRHIPTAEERCIVRAWTWRVLIIYGAFVLTAFGVVSLGQHFGQGSKDLIAADVRVLTSGSN*
Ga0070701_107873621	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	MHKPYLHIPTAEERCVVRGWTWRVLIIYGACVLTAFGVVSLGQHFDQGSKDVRTADVRALTSGRN*
Ga0070694_1010088651	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MHKPYRHIPTAEERCIVRAWTWRVLIIYGAFVLTAFGVVSLGQNFGQGSKDLIAADVRVLTSGSN*
Ga0070678_1000788864	3300005456	Miscanthus Rhizosphere	MHKPYLHIPTAEERSVVRGWTWRVLIIYGAFVLTAFGVMSLGQHFGQGSKDLITADIRALTSGRN*
Ga0070681_116157611	3300005458	Corn Rhizosphere	MHKPYRYIPTAEERCIVRAWTWRVLIIYGAFVLTAFGVVSLGQNFGQGSKDLIAADVRVLTSGSN*
Ga0068867_1013063072	3300005459	Miscanthus Rhizosphere	MHKPYRHIPTAEERCIVRAWTWRVLIIYGAFVLTAFGVVSLGQHFGQGSKDLITADIRALTSGRN*
Ga0070685_105624392	3300005466	Switchgrass Rhizosphere	MHKPYRYIPTAEERCIVRAWTWRVLIIYGAFVLTAFGVVSLGQHFGQGSKDLIAADVRVLTSGSN*
Ga0068853_1022861661	3300005539	Corn Rhizosphere	MHKPYLHIPTAEERCIVRRWTWRVLIIYGAFVLTAFGVLSLGQGSKELITADVRAPTSGRN*
Ga0070672_1015826112	3300005543	Miscanthus Rhizosphere	AEERCIVRAWTWRVLIIYGAFVLTAFGVVSLGQNFGQGSKDLIAADVRVLTSGSN*
Ga0070686_1010162551	3300005544	Switchgrass Rhizosphere	MRKPYRYIPTAEERCIVRVWTWRVLIIYGAFVLTAFGVVSLGQHFGQGSKDLIAADVRVLTSGSN*
Ga0070704_1009761272	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MHKPYRHIPTAEERCIVRAWTWRVLIIYGAFVLTAFGVVSLGQNFGQGSKDLIADVR
Ga0070664_1002494943	3300005564	Corn Rhizosphere	MHKPYLHIPTAEERCIVRGWTWRVLIIYGACVLTAFGVVSLGQHFDQGSKDVRTADVRALTSGRN*
Ga0068866_102994882	3300005718	Miscanthus Rhizosphere	MHKPYRHIPTAEERCIVRAWTWRVLIIYGAFVLTAFGVVSLGQHFGQGSKDLI
Ga0066903_1017189402	3300005764	Tropical Forest Soil	MHKPYLYIPTPEERCVVRSWAWHVLIIYGAFVLTAFGLVSLSQHSGQRSKDLIAAAVTAPTSDRNQSTVKTHEAVTTRLQTTP*
Ga0068863_1019711851	3300005841	Switchgrass Rhizosphere	MHKPYLHIPTAEERCIVRGWTWRVLIIYGAFVLTAFGVVSLGQHFGHGSKDLITADARALTSGRN*
Ga0068860_1004551432	3300005843	Switchgrass Rhizosphere	MHKPYRHIPTAEERCIVRAWTWRVLIIYGAFVLTAFGVVSLGQHFSQGSKDLIAADVRVLTSGSN*
Ga0068862_1006323292	3300005844	Switchgrass Rhizosphere	MHKPYRHIPTAEERCIVRAWTWRVLIIYGAFVLTAFGVVSLGQHFGQGSKDLIAADVRVLTSGRN*
Ga0081455_100221102	3300005937	Tabebuia Heterophylla Rhizosphere	MHKPYLYIPTAEDAAFVRRWTWRVLIIYGAFVLTAFGLVSLNQHSGQGSKDLIAADVTAPTSGRNQSTVRTHEAATTRLQTTTP*
Ga0075365_101907561	3300006038	Populus Endosphere	MHKPYLYIPTAEERRVVRRWTWRVLIIYGALVLTAFGVVSLSQHPGQGSKDLIAADVTDPTTGRNQSSVKTHEAATTRL
Ga0075363_1005259612	3300006048	Populus Endosphere	NHIGASNMHRPYLHIPTAEERCIVRGWTWRVLIIYGACVLTAFGVVSLGQHFDQGSKDLITADVRAQTSGRN*
Ga0075364_100735552	3300006051	Populus Endosphere	MHKPYLYIPTAEERRVVRRWTWRVLIIYGALVLTAFGVVSLSQHPGQGSKDLIAADVTDPTTGRNQSSVKTHEAATTRLQTTTP*
Ga0070715_103169362	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MHKPYLHIPTAEERCVVRGWTWRVLIIYGAFVLTAFGVVSLGQHFGQGSKDLIAADVRVLTSGSN*
Ga0068871_1003151772	3300006358	Miscanthus Rhizosphere	MHKPYLHIPTAEERCVVRGWTWRVLIIYGAFVLTAFGVISLGQHFGQGSKDLITADIRALTSGRN*
Ga0105250_103826651	3300009092	Switchgrass Rhizosphere	MHRPYLHIPTAEERCIVRGWTWRVLIIYGACVLTAFGVVSLGQHFSQGSKDLIAADVRVLTSGSN*
Ga0105245_104598583	3300009098	Miscanthus Rhizosphere	MHKPYLHIPTAEERCIVRGWTWRVLIIYGAFVLTAFGVVSLGQNFGQGSKELIADVRVLTSGSN*
Ga0114129_124419751	3300009147	Populus Rhizosphere	TAEERRVVRRWTWRVLIIYGALVLTAFGVVSLSQHPGQGSKDLIAADVTDPTTGRNQSSVKTHEAATTRLQTTTP*
Ga0111538_104754794	3300009156	Populus Rhizosphere	MHKPYLYIPTAEERRVVRRWTWRVLIIYGAFVLTAFGLVSLGQHSGQGSKDLIAADVTDPTTGRNQSSVKTHEAATTRLQTTTP*
Ga0111538_117113122	3300009156	Populus Rhizosphere	MHKPYRYIPTAEERCIVRAWTWRVLIIYGAFVLTAFGVVSLGQHFGQGSKDLIAAEVTAPTAGRNQSTVKTHKAAATRLQTTP*
Ga0105242_114673011	3300009176	Miscanthus Rhizosphere	MHRPYMHIPTAEERCIVRGWTWRVLIIYGACVLTAFGVVSLGQHFDQGSKDVRTADVRALTSGRN*
Ga0105248_108284082	3300009177	Switchgrass Rhizosphere	MHKPYRHIPTAEERCIVRAWTWRVLIIYGAFVLTAFGVVSLGQHFGQGSKDLIADVRVLTSGSN*
Ga0105237_113823751	3300009545	Corn Rhizosphere	MHKPYLHIPTAEERCIVRGWTWRVLIIYGAFVLTAFGVVSLGQHFSQGSKDLIAADVRVLTSGRN*
Ga0099796_101712652	3300010159	Vadose Zone Soil	MHKPYLYIPTAEERRVVRRWTWRVLIIYGAFVLTAFGLLSLSQHYDQGSKDLIAADVTAPTSGRNQSTVKTHEAATTRLQTTP*
Ga0134128_122586292	3300010373	Terrestrial Soil	SNMHRPYLHIPTAEERCIVRGWTWRVLIIYGACVLTAFGVVSLGQHFDQGSKDVRTADVRALTSGRN*
Ga0138513_1000239521	3300011000	Soil	IGASKMHKPYRHIPTAEERCIVRAWTWRVLIIYGAFVLTAFGVVSLGQNFGQGSKDLIAADVRVLTSGSN*
Ga0105246_104462062	3300011119	Miscanthus Rhizosphere	MHKPYLHIPTAEERCIVRAWTWRVLIIYGAFVLTAFGVVSLGQHFGHGSKDLITADARALTSGRN*
Ga0137424_11362841	3300011412	Soil	MHKPYRYIPTAEERCIVRAWTWRVLIIYGAFVLTAFGVVSLGQNFGQGSKDLIAADVRV
Ga0137397_108801522	3300012685	Vadose Zone Soil	MHKPYLYIPTAEERRVVRRWTWRVLIIYGAFVLTAFGLLSLSQHYGQGSKDLIAADVTAPTSGRNQSTVKTHEAATIRLQTTP*
Ga0157302_102764181	3300012915	Soil	ERCIVRGWTWRVLIIYGACVLTAFGVVSLGQHFDQGSKDVRTADVRALTSGRN*
Ga0137413_105837252	3300012924	Vadose Zone Soil	MHKPYLYIPTAEERRVVRRWTWRVLIIYGAFVLTAFGLLSLSQHYGQGSKDLIAADVTAPASGRNQSTVKTHEAATIRLQTTP*
Ga0162651_1000059473	3300012938	Soil	MHKPYRHIPTAEERCIVRAWTWRVLIIYGAFVLTAFGVVSLGQHFGQGSKDLITAEVRALTSGRN*
Ga0162650_1000003662	3300012939	Soil	MHKPYLYIPTAEERSIVRGWTLRVLIIYGAFVLTAFGVVSLGQHFGQGSKDLITAEVRALTSGRN*
Ga0164300_107544322	3300012951	Soil	MHKPYLYIPTAEERCIVRAWTWRVLIIYGALVLTAFGVVSLGQNFGQGSKDLIADVRVLTSGSN*
Ga0164298_104043551	3300012955	Soil	MHKPYLHIPTAEERCIVRGWTWRVLIIYGAFVLTAFGVVSLGQHFGQGSKDLIAADVRVLTSGSN*
Ga0164298_109629311	3300012955	Soil	TAEERCIVRRWTWRVLIIYGAFVLTAFGLLSLSQHFGQRSKDLITADARALTSGRN*
Ga0164309_114986371	3300012984	Soil	MHKPYRHIPTAEERCIVRAWTWRVLIIYGAFVLTAFGVVSLGHHFGQGSKGLIAADARVLTSGSN*
Ga0164304_100497762	3300012986	Soil	MHKPYLHIPTAEERCVVRGWTWRVLIIYGAFVLTAFGVVSLGQNFGQGSKDLIADVRVPTSGSN*
Ga0164306_109424801	3300012988	Soil	MHKPYLHIPTAEERCIVRGWTWRVLIIYGAFVLTAFGVVSLGQHFGQGSKDLIAADVRVLTSGRN*
Ga0164305_108732501	3300012989	Soil	MHKPYLHIPTAEEHCIVRGWTWRVLIIYGAFVLTAFGVVSLGQHFGQGSKDLIAADVRVLTSGSN*
Ga0157374_109772651	3300013296	Miscanthus Rhizosphere	MHKPYLHIPTAEERCIVRGWTWRVLIIYGAFVLTAFGVVSLGQNFGQGSKDLIADVRVLTSGSN*
Ga0157378_108185521	3300013297	Miscanthus Rhizosphere	MHKPYLHIPTAEERCIVRGWTWRVLIIYGAFVLTAFGVVSLGQHFGQGSKDLITADIRALTSGRN*
Ga0163162_111546441	3300013306	Switchgrass Rhizosphere	LHIPTAEERCIVRGWTWRVLIIYGAFVLTAFGVVSLGQHFGQGSKDLIAADVRVLTSGSN
Ga0157379_123745001	3300014968	Switchgrass Rhizosphere	MRKPYLYIPTAEEGCIVRRWTWRVLIIYGAFVLTAFGVVSLGQHFGHGSKDLITADARALTSGRN*
Ga0157376_103593982	3300014969	Miscanthus Rhizosphere	MHKPYLHIPTAEERCVVRGWTWRVLIIYGAFVLTAFGVVSLGQHFGHGSKDLITADARALTSGRN*
Ga0137412_106700782	3300015242	Vadose Zone Soil	MHKPYLYIPTAEERRVVRRWTWRVLIIYGAVVLTAFGLLSLSEHYDQGSKDLIAADVTAPASGRNQSTVKTHEAATIRLQTTP*
Ga0132257_1018446551	3300015373	Arabidopsis Rhizosphere	MHKPYLHIPTAEERCVVRGWTWRVLIIYGAFVLTAFGVVSLGQHFGQGSKDLITADIRALTSGRN*
Ga0190266_108820271	3300017965	Soil	MHKPYRHIPTAEERCIVRAWTWRVLIIYGTFVLTAFGVVSLGQHFGQGSKDLIAADVRVLTS
Ga0184605_100054326	3300018027	Groundwater Sediment	MHKPYLYIPTAEERCIVRRWTSRVLIIYGAFVLAAFGLVSLSQHFGQGSKDLIAADVTAPTAGRNQSTIKTHEAAATRPQTTP
Ga0184605_101068582	3300018027	Groundwater Sediment	MHKPYLYIPTAEERRVVRRWTWRVLIIYGAFVLTAFGLLSLSQHYGQASKDLIAADVTAPTSGRNQSTVRTHEAATTRLQTTP
Ga0184608_104453931	3300018028	Groundwater Sediment	MHKPYLYIPTAEERRIVRRWTWRVLIIYGAFVLTAFGVVSLGQGSKDLITADVRAPTSGR
Ga0184634_100485904	3300018031	Groundwater Sediment	MHKPYRHIPTAEERCIVRAWTWRVLIIYGAFVLTAFGVVSLGQHFGQGSKDLIAADVRVLTSGSN
Ga0184620_100498262	3300018051	Groundwater Sediment	MHKPYRYIPTAEERCIVRAWTWRVLIIYGAFVLTAFGVVSLGQNFGQGSKDLIADVRVLTSGSN
Ga0184621_101134962	3300018054	Groundwater Sediment	MHKPYLYIPTAEERRVVRRWTWRVLIIYGAFVLTAFGLLSLSQHFGQGSKDLIAADVTAPTSGRNQSTVRTHEAATTRLQTTP
Ga0184616_101062211	3300018055	Groundwater Sediment	MHKPYRYIPTAEERCIVRAWTWRVLIIYGAFVLTAFGVVSLGQHFGQGSKDLIAADVRVPTSGSN
Ga0184619_100580814	3300018061	Groundwater Sediment	MHKPYLYIPTAEERCIVRRWTSRVLIIYGAFVLAAFGLVSLSQHFGQGSKDLIAADVRVLTSGSN
Ga0184619_100796633	3300018061	Groundwater Sediment	MHKPYLYIPTAEERRVVRRWTWRVLIIYGAFVLTAFGLLSLSQHYGQASKDLIAADVTAPTSGRNQSTVKTHEAATTRLQTTP
Ga0184611_10085425	3300018067	Groundwater Sediment	MHKPYRYIPTAEERCIVRAWTWRVLIIYGAFVLTAFGVVSLGQNFGQGSKDLIADGRVLTSGSN
Ga0184611_10985453	3300018067	Groundwater Sediment	MHKPYLYIPTAEERCIVRRWTWRVLIIYGAFVLTAFGLLSLSQHFGQGSKDLIAANVTAPTSGRNQSTVKTHEAATTRLQTTP
Ga0184618_104027642	3300018071	Groundwater Sediment	MHKPYLYIPTAEERCIVRRWTWRVLIIYGAFVLAAFGLVSLSQHFGQGSKDLIAADVTAPTAGRNQSTIKTHEAAATRPQTTP
Ga0184624_102188081	3300018073	Groundwater Sediment	MHKPYLHIPTAEERSIVRGWTLRVLIIYGAFVLTAFGVVSLGQHFGQGSKDLITAEVRALTSGRN
Ga0184609_101969883	3300018076	Groundwater Sediment	MHKPYRYIPTAEERCIVRAWTWRVLIIYGAFVLTAFGLLSLSQHFGQGSKDLIAADVTAPTSGRNQSTVKTHEAAATRPQTTP
Ga0184633_100453994	3300018077	Groundwater Sediment	MHKPYLHIPTAEERSIVRGWTLRVLIIYGAFVLTAFGVVSLGQNFGQGSKDLIADVRVLTSGSN
Ga0184639_100742663	3300018082	Groundwater Sediment	MHKPYLHIPTAEERSIVRGWTLRVLIIYGAFVLTAFGVVSLGQNFGQGSKDLIAADVRVLTSGSN
Ga0173479_108996221	3300019362	Soil	LHIPTAEERCIVRGWTWRVLIIYGACVLTAFGVVSLGQHFDQGSKDVRTADVRALTSGRN
Ga0190267_101096682	3300019767	Soil	MHKPYRHIPTAEERCIVRAWTWRALIIYGAFVLTAFGVVSLGQHFGQGSKDLITAEVRALTSGRN
Ga0193704_10512272	3300019867	Soil	MRKPYLYIPTAEEGCIVRRWTWRVLIIYGAFVLAAFGLVSLSQHFGQGSKDLIAADVTAPTAGRNQSTIKTHEAAATRPQTTP
Ga0193693_10355922	3300019996	Soil	MHKPYLHIPTAEERCIVRGWTWRVLIIYGAFVLTAFGVVSLGQHFGQGSKDLIAADVRALTSGRN
Ga0193731_11666921	3300020001	Soil	MHKPYLHIPTAEERCIVRGWTWRVLIIYGAFVLTAFGVVSLGQHFGQGSKDLIAADVTAPTVGRNQSTIKTHEAAATRPQTTP
Ga0193730_10342003	3300020002	Soil	MHKPYLYIPTAEERCIVRRWTWRVLIIYGAFVLAAFGLVSLSQHFGQGSKDLIAADVTAPTAGRNQSTVKTHEAAATRPQTTP
Ga0193696_10481261	3300020016	Soil	IPTAEERCIVRAWTWRVLIIYGAFVLTAFGVVSLGQNFGQGSKDLIAADVRVLTSGSN
Ga0193699_102025092	3300021363	Soil	LYIPTAEERCIVRRWTWRVLIIYGAFVLAAFGLVSLSQHFGQGSKDLIAADVTAPTAGRNQSTIKTHEAAATRPQTTP
Ga0222621_10457522	3300021510	Groundwater Sediment	MHKPYRYIPTAEERCIVRAWTWRVLIIYGAFVLTAFGVVSLGQNFGQGSKDLIAADVRVLTSGSN
Ga0222624_14512572	3300021951	Groundwater Sediment	MHKPYLYIPTAEERCIVRRWTSRVLIIYGAFVLAAFGLVSLSQHFGQGSKDLIAADVTAPTAGRNQSTIK
Ga0222623_101614611	3300022694	Groundwater Sediment	MHKPYRHIPTAEERCIVRAWTWRVLIIYGAFVLTAFGVVSLGQNFGQGSKDLIAADVRVLTSGSN
Ga0247785_10505911	3300022889	Soil	MHRPYLHIPTAEERCIVRGWTWRVLIIYGACVLTAFGVVSLGQHFDQGSKDVRTADVRALTSGRN
Ga0207688_101558564	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	AEERCIVRVWTWRVLIIYGAFVLTAFGVVSLGQNFGQGSKDLIAADVRVLTSGSN
Ga0207687_111709331	3300025927	Miscanthus Rhizosphere	HKPYRHIPTAEERCIVRAWTWRVLIIYGAFVLTAFGVVSLGQNFGQGSKDLIAADVRVLTSGSN
Ga0207706_102913142	3300025933	Corn Rhizosphere	MHKPYLHIPTAEERCIVRAWTWRVLIIYGAFVLTAFGVVSLGQHFGQGSKDLIAADVRALTSGRN
Ga0207686_103419133	3300025934	Miscanthus Rhizosphere	HKPYRHIPTAEERCIVRAWTWRVLIIYGAFVLTAFGVVSLGQNFGQGSKDLIADVRVLTSGSN
Ga0207691_104280922	3300025940	Miscanthus Rhizosphere	MHKPYRYIPTAEERGIVRAWTWRVLIIYGAFVLTAFGVVSLGQNFGQGSKDLIADVRVLTSGSN
Ga0207679_102381093	3300025945	Corn Rhizosphere	YLHIPTAEERCIVRGWTWRVLIIYGACVLTAFGVVSLGQHFDQGSKDVRTADVRALTSGR
Ga0207658_112604172	3300025986	Switchgrass Rhizosphere	MHKPYRYIPTAEERCIVRGWTWRVLIIYGAFVLTAFGVVSLGQHFSQGSKDLIAADVRVLTSGRN
Ga0207678_100915134	3300026067	Corn Rhizosphere	MHKPYRYIPTAEERCIVRAWTWRVLIIYGAFVLTAFGVVSLGQNFGQGSKDLIAADVRVLTSGRN
Ga0207708_100717552	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MHKPYLHIPTAEERCIVRAWTWRVLIIYGAFVLTAFGVVSLGQNFGQGSKDLIAADVRVLTSGSN
Ga0207641_109731371	3300026088	Switchgrass Rhizosphere	MHRPYMHIPTAEERCIVRGWTWRVLIIYGACVLTAFGVVSLGQHFDQGSKDVRTADVRA
Ga0207698_105886092	3300026142	Corn Rhizosphere	MHKPYRHIPTAEERCIVRAWTWRVLIIYGAFVLTAFGVVSLGQHFGHGSKDLITADARALTSGRN
Ga0208981_10669391	3300027669	Forest Soil	MHKPYLYIPTAEERRVVRRWTWRVLIIYGAFVLTAFGLLSLSQHYGQGSKDLIAA
Ga0209488_104287502	3300027903	Vadose Zone Soil	MHKPYLYIPTAEERRVVRRWTWRVLIIYGAFVLTAFGLLSLSQHYDQGSKDLIAADVTAPTSGRNQSTVKTHEAATTRLQTTP
Ga0209382_103073742	3300027909	Populus Rhizosphere	MHKPYLYIPTAEERRVVRRWTWRVLIIYGALVLTAFGVVSLSQHPGQGSKDLIAADVTDPTTGRNQSSVKTHEAATTRLQTTTP
Ga0268265_105373103	3300028380	Switchgrass Rhizosphere	MHKPYLHIPTAEERCIVRGWTWRVLIIYGAFVLTAFGVVSLGQHFGQGSKDLIAADVRVLTSGRN
Ga0268264_108638432	3300028381	Switchgrass Rhizosphere	MHKPYRHIPTAEERCIVRAWTWRVLIIYGAFVLTAFGVVSLGQNFGQGSKDVIAADVRVLTSGSN
Ga0247818_112603701	3300028589	Soil	MHKPYRHIPTAEERCIVRAWTWRVLIIYGAFVLTAYGVVSLGQNFGQGSEDLIAADARVLTSGSN
Ga0307295_101903872	3300028708	Soil	MHKPYLHIPTAEERSIVRGWTLRVLIIYGAFVLTAFGVVSLGQHFGQGSKDLITADVRALTSGRN
Ga0307322_100243372	3300028710	Soil	MHKPYLYIPTAEERCIVRRWTSRVLIIYGAFVLAAFGLVSLSQHFGQGSKDLIAADVT
Ga0307311_101451482	3300028716	Soil	PYRYIPTAEERCIVRAWTWRVLIIYGAFVLTAFGVVSLGQNFGQGSKDLIAADVRVLTSGSN
Ga0307301_100222881	3300028719	Soil	MHKPYLYIPTAEERRVVRRWTWRVLIIYGAFVLTAFGLLSLSQHYGQASKDLIAADVTAPTSGRNQST
Ga0307317_100886221	3300028720	Soil	PYLYIPTAEERCIVRRWTWRVLIIYGAFVLTAFGLLSLSQHYGQASKDLIAADVTAPTSGRNQSTVKTHEAATTRLQTTP
Ga0307317_101129021	3300028720	Soil	MHKPYLYIPTAEERCIVRRWTSRVLIIYGAFVLAAFGLVSLSQHFGQGSKDLIAADVTAPTA
Ga0307297_104001161	3300028754	Soil	MHKPYLYIPTAEERRVVRRWTWRVLIIYGAFVLTAFGLLSLSQHYGQASKDLIAADVTAPTSGRNQSTVKTHEAATTRL
Ga0307288_102039732	3300028778	Soil	MHKPYLYIPTAEERRVVRRWTWRVLIIYGAFVLTAFGLLSLSQHYGQASKDLIAADVTAPTSGRNQSTVKTHEA
Ga0307306_101583711	3300028782	Soil	MHKPYRYIPTAEERCIVRAWTWRVLIIYGAFVLTAFGVVSLGQHFGQGSKDLITADVRALTSGRN
Ga0307282_103082602	3300028784	Soil	MHKPYLYIPTAEERRVVRRWTWRVLIIYGAFVLTAFGLLSLSQHYGQASKDLIAADVTAPTSGRNQSTVKTHEAA
Ga0307283_100968612	3300028790	Soil	MHKPYLHIPTAEERSIVRGWTLRVLIIYGAFVLTAFGVVSLGQHFGQGSKDLIAADVTAPTAGRNQSTIKTHEAAATRPQTTP
Ga0307305_100710091	3300028807	Soil	MHKPYLYIPTAEERCIVRRWTSRVLIIYGAFVLAAFGLVSLSQHFGQGSKDLIAADVTA
Ga0307296_100188943	3300028819	Soil	MHKPYLYIPTAEERRVVRRWTWRVLIIYGAFVLTAFGLLSLSQHYGQASKDLIAADVTAPTSGRNQSTVKTHEAPTTRLQTTP
Ga0307314_100317451	3300028872	Soil	MHKPYLHIPTAEERSIVRGWTLRVLIIYGAFVLTAFGVVSLGQHFGQGSKDLITA
Ga0307277_100550462	3300028881	Soil	MHKPYLYIPTAEERRVVRRWTWRVLIIYGAFVLTAFGLLSLSQHYGQASKDLIAADVTAPTSGRNQ
Ga0247827_109479961	3300028889	Soil	MHKPYRYIPTAEERCIVRAWTWRVLIIYGAFVLTAFGVVSLGQNFGQGSKDLIAADVRVPTSGSN
Ga0307499_102424271	3300031184	Soil	MHKPYRHIPTAEERCIVRAWTWRVLIIYGAFVLTAFGVVSLGQHFGQGGSKDLIAADVRVLTSGSN
Ga0308194_103645451	3300031421	Soil	MHKPYLYIPTAEERCIVRRWTSRSLIIYGAFVLAAFGLVSLSQHFGQGSKDLIAADVTAPTAGRNQSTIKTHEAAATRPQTTP
Ga0310886_102117111	3300031562	Soil	MHKPYRYIPTAEERCIVRAWTWRVLIIYGAFVLTAFGVVSLGQHFGQGSKDLIADVRVLTSGSN
Ga0307469_122290701	3300031720	Hardwood Forest Soil	MHKPYLHIPTAEERCIVRGWTWRVLIIYGAFVLTAFGVVSLGQHFGQGSKDLIAADVRVLTSGSN
Ga0310884_108854492	3300031944	Soil	SKMHKPYRYIPTAEERCIVRAWTWRVLIIYGAFVLTAFGVVSLGQNFGQGSKDLIADVRVLTSGSN
Ga0307472_1003882021	3300032205	Hardwood Forest Soil	IVRRWTWRVLIIYGAFVLTAFGLVSLSQHSGQGSKDLIAADVKAPTSGRNQSTVKTHEAATTRLQTTP
Ga0364933_030347_1_180	3300034150	Sediment	RYIPTAEERCIVRAWTWRVLIIYGAFVLTAFGVVSLGQNFGQGSKDLIADVRVLTSGSN
Ga0364935_0154400_530_727	3300034151	Sediment	MHKPYLHIPTAEERSIVRGWTLRVLIIYGAFVLTAFGVVSLGQHFGQGSKDLIAADVRVLTSGSN
Ga0370545_014887_3_176	3300034643	Soil	IPTAEERCIVRAWTWRVLIIYGAFVLTAFGVVSLGQNFGQGSKDLIADVRVLTSGSN

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F054384

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign