Metagenome / Metatranscriptome Family F054369

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F054369
Family Type	Metagenome / Metatranscriptome
Number of Sequences	140
Average Sequence Length	62 residues
Representative Sequence	MTQVERQQLIEFGILTPDCGPSITYWKLSPELKREARRRMKERERMTGGLLLTRILERLKRA
Number of Associated Samples	87
Number of Associated Scaffolds	140

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	76.43 %
% of genes near scaffold ends (potentially truncated)	27.86 %
% of genes from short scaffolds (< 2000 bps)	77.14 %
Associated GOLD sequencing projects	80
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.55

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (92.143 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil (20.714 % of family members)
Environment Ontology (ENVO)	Unclassified (40.714 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (67.857 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 44.44% β-sheet: 0.00% Coil/Unstructured: 55.56%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.55
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.55
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 140 Family Scaffolds
PF00589	Phage_integrase	19.29
PF04773	FecR	2.86
PF00903	Glyoxalase	1.43
PF04326	AlbA_2	0.71
PF01575	MaoC_dehydratas	0.71
PF05231	MASE1	0.71
PF07007	LprI	0.71
PF04015	DUF362	0.71
PF13884	Peptidase_S74	0.71
PF12120	Arr-ms	0.71
PF12728	HTH_17	0.71
PF10518	TAT_signal	0.71
PF00082	Peptidase_S8	0.71
PF12681	Glyoxalase_2	0.71
PF03167	UDG	0.71

COG ID	Name	Functional Category	% Frequency in 140 Family Scaffolds
COG0642	Signal transduction histidine kinase	Signal transduction mechanisms [T]	0.71
COG0692	Uracil-DNA glycosylase	Replication, recombination and repair [L]	0.71
COG1573	Uracil-DNA glycosylase	Replication, recombination and repair [L]	0.71
COG2006	Uncharacterized conserved protein, DUF362 family	Function unknown [S]	0.71
COG2865	Predicted transcriptional regulator, contains HTH domain	Transcription [K]	0.71
COG3447	Integral membrane sensor domain MASE1	Signal transduction mechanisms [T]	0.71
COG3663	G:T/U-mismatch repair DNA glycosylase	Replication, recombination and repair [L]	0.71
COG3755	Uncharacterized conserved protein YecT, DUF1311 family	Function unknown [S]	0.71
COG3851	Signal transduction histidine kinase UhpB, glucose-6-phosphate specific	Signal transduction mechanisms [T]	0.71

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	92.86 %
Unclassified	root	N/A	7.14 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	92.14 %
Unclassified	root	N/A	7.14 %
Viruses	superkingdom	All Organisms → Viruses	0.71 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	92.14 %
Unclassified	root	N/A	7.14 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.71 %

Name	Rank	Taxonomy	Distribution
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	75.71 %
Unclassified	root	N/A	7.14 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.71 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.71 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	75.71 %
Unclassified	root	N/A	7.14 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.71 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.71 %

Name	Rank	Taxonomy	Distribution
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	66.43 %
Unclassified	root	N/A	7.14 %
Spartobacteria	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	5.71 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.71 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.71 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	66.43 %
Unclassified	root	N/A	7.14 %
Chthoniobacterales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales	5.71 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.71 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.71 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	66.43 %
Unclassified	root	N/A	7.14 %
Chthoniobacteraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	5.71 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.71 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.71 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	66.43 %
Unclassified	root	N/A	7.14 %
Candidatus Udaeobacter	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	5.71 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.71 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.71 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	66.43 %
Unclassified	root	N/A	7.14 %
unclassified Candidatus Udaeobacter	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → unclassified Candidatus Udaeobacter	5.71 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.71 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.71 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	66.43 %
Unclassified	root	N/A	7.14 %
Candidatus Udaeobacter sp.	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → unclassified Candidatus Udaeobacter → Candidatus Udaeobacter sp.	5.71 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.71 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.71 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2070309004\|prs_FHA1B5K04XX9TD	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	514	Open in IMG/M
2088090014\|GPIPI_16759078	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2368	Open in IMG/M
2088090014\|GPIPI_16765105	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	10328	Open in IMG/M
2088090014\|GPIPI_17076829	All Organisms → cellular organisms → Bacteria	4560	Open in IMG/M
2088090014\|GPIPI_17485179	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	4013	Open in IMG/M
2124908045\|KansclcFeb2_ConsensusfromContig361340	Not Available	610	Open in IMG/M
2170459007\|GKWS7RC02I3MA9	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	530	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_100380051	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	574	Open in IMG/M
3300000580\|AF_2010_repII_A01DRAFT_1059731	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	583	Open in IMG/M
3300000881\|JGI10215J12807_1356887	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1647	Open in IMG/M
3300000953\|JGI11615J12901_10539616	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	586	Open in IMG/M
3300000955\|JGI1027J12803_100412785	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2214	Open in IMG/M
3300000955\|JGI1027J12803_101013732	Not Available	530	Open in IMG/M
3300000955\|JGI1027J12803_103603787	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1014	Open in IMG/M
3300000955\|JGI1027J12803_104745454	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1209	Open in IMG/M
3300000956\|JGI10216J12902_102028026	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1556	Open in IMG/M
3300000956\|JGI10216J12902_112514980	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	855	Open in IMG/M
3300002899\|JGIcombinedJ43975_10001836	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	3297	Open in IMG/M
3300003911\|JGI25405J52794_10015522	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1497	Open in IMG/M
3300004114\|Ga0062593_100692740	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	992	Open in IMG/M
3300004114\|Ga0062593_100851707	All Organisms → cellular organisms → Bacteria	914	Open in IMG/M
3300004156\|Ga0062589_101847375	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	608	Open in IMG/M
3300004157\|Ga0062590_100088904	All Organisms → cellular organisms → Bacteria	1907	Open in IMG/M
3300004463\|Ga0063356_100517779	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1584	Open in IMG/M
3300004463\|Ga0063356_101239538	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1086	Open in IMG/M
3300004463\|Ga0063356_105957010	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → unclassified Candidatus Udaeobacter → Candidatus Udaeobacter sp.	523	Open in IMG/M
3300004479\|Ga0062595_100500679	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	912	Open in IMG/M
3300004479\|Ga0062595_100544146	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	887	Open in IMG/M
3300005093\|Ga0062594_100735257	All Organisms → cellular organisms → Bacteria	898	Open in IMG/M
3300005186\|Ga0066676_10048744	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2398	Open in IMG/M
3300005290\|Ga0065712_10587186	All Organisms → cellular organisms → Bacteria	595	Open in IMG/M
3300005294\|Ga0065705_10245107	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1216	Open in IMG/M
3300005295\|Ga0065707_10182581	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → unclassified Candidatus Udaeobacter → Candidatus Udaeobacter sp.	1409	Open in IMG/M
3300005332\|Ga0066388_100022184	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	5619	Open in IMG/M
3300005332\|Ga0066388_100184754	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2696	Open in IMG/M
3300005332\|Ga0066388_100232965	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2475	Open in IMG/M
3300005332\|Ga0066388_100268878	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2346	Open in IMG/M
3300005332\|Ga0066388_100837373	All Organisms → cellular organisms → Bacteria	1507	Open in IMG/M
3300005332\|Ga0066388_100963265	All Organisms → cellular organisms → Bacteria	1422	Open in IMG/M
3300005332\|Ga0066388_101825473	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1082	Open in IMG/M
3300005332\|Ga0066388_101880112	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1068	Open in IMG/M
3300005332\|Ga0066388_102009191	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1037	Open in IMG/M
3300005332\|Ga0066388_102035572	All Organisms → cellular organisms → Bacteria	1031	Open in IMG/M
3300005332\|Ga0066388_102409734	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	955	Open in IMG/M
3300005332\|Ga0066388_102878928	Not Available	879	Open in IMG/M
3300005332\|Ga0066388_104758229	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	691	Open in IMG/M
3300005332\|Ga0066388_105947225	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	616	Open in IMG/M
3300005332\|Ga0066388_106927143	Not Available	570	Open in IMG/M
3300005355\|Ga0070671_101041897	All Organisms → cellular organisms → Bacteria	718	Open in IMG/M
3300005445\|Ga0070708_101848901	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	560	Open in IMG/M
3300005467\|Ga0070706_100112030	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2539	Open in IMG/M
3300005471\|Ga0070698_101174371	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	716	Open in IMG/M
3300005518\|Ga0070699_101599578	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	597	Open in IMG/M
3300005535\|Ga0070684_100527085	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1095	Open in IMG/M
3300005536\|Ga0070697_100088938	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2551	Open in IMG/M
3300005713\|Ga0066905_100295131	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1270	Open in IMG/M
3300005764\|Ga0066903_100001185	All Organisms → cellular organisms → Bacteria	18573	Open in IMG/M
3300005764\|Ga0066903_100006317	All Organisms → cellular organisms → Bacteria	10502	Open in IMG/M
3300005764\|Ga0066903_100092821	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	4025	Open in IMG/M
3300005764\|Ga0066903_100131460	All Organisms → cellular organisms → Bacteria	3522	Open in IMG/M
3300005764\|Ga0066903_101155643	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1433	Open in IMG/M
3300005764\|Ga0066903_101475267	All Organisms → cellular organisms → Bacteria	1282	Open in IMG/M
3300005764\|Ga0066903_101651306	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1218	Open in IMG/M
3300005764\|Ga0066903_101805851	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1168	Open in IMG/M
3300005764\|Ga0066903_101860153	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1152	Open in IMG/M
3300005764\|Ga0066903_103691624	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	824	Open in IMG/M
3300005764\|Ga0066903_104209299	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	770	Open in IMG/M
3300005764\|Ga0066903_105801188	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	648	Open in IMG/M
3300005764\|Ga0066903_107203816	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	576	Open in IMG/M
3300005937\|Ga0081455_10165502	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1690	Open in IMG/M
3300005937\|Ga0081455_10393865	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → unclassified Candidatus Udaeobacter → Candidatus Udaeobacter sp.	963	Open in IMG/M
3300005983\|Ga0081540_1084508	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1416	Open in IMG/M
3300006163\|Ga0070715_10869445	All Organisms → cellular organisms → Bacteria	553	Open in IMG/M
3300006169\|Ga0082029_1313750	All Organisms → cellular organisms → Bacteria	10680	Open in IMG/M
3300006844\|Ga0075428_101549445	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	694	Open in IMG/M
3300006844\|Ga0075428_102066987	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → unclassified Candidatus Udaeobacter → Candidatus Udaeobacter sp.	590	Open in IMG/M
3300006871\|Ga0075434_100576754	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1144	Open in IMG/M
3300007255\|Ga0099791_10075995	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1527	Open in IMG/M
3300009147\|Ga0114129_10043040	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	6356	Open in IMG/M
3300010043\|Ga0126380_10641346	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	844	Open in IMG/M
3300010043\|Ga0126380_10811406	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	767	Open in IMG/M
3300010043\|Ga0126380_11703133	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	567	Open in IMG/M
3300010046\|Ga0126384_10755457	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	867	Open in IMG/M
3300010047\|Ga0126382_10722107	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	839	Open in IMG/M
3300010048\|Ga0126373_10587547	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1165	Open in IMG/M
3300010048\|Ga0126373_13273267	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	504	Open in IMG/M
3300010358\|Ga0126370_10384092	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1148	Open in IMG/M
3300010359\|Ga0126376_12667174	Not Available	549	Open in IMG/M
3300010360\|Ga0126372_10045518	All Organisms → cellular organisms → Bacteria	2918	Open in IMG/M
3300010360\|Ga0126372_13332830	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → unclassified Candidatus Udaeobacter → Candidatus Udaeobacter sp.	500	Open in IMG/M
3300010362\|Ga0126377_10859856	All Organisms → cellular organisms → Bacteria	968	Open in IMG/M
3300010376\|Ga0126381_100006575	All Organisms → cellular organisms → Bacteria	12868	Open in IMG/M
3300010376\|Ga0126381_101489485	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	978	Open in IMG/M
3300010376\|Ga0126381_102594145	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	725	Open in IMG/M
3300010376\|Ga0126381_103264546	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	640	Open in IMG/M
3300012198\|Ga0137364_10917445	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	663	Open in IMG/M
3300012198\|Ga0137364_11210926	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	565	Open in IMG/M
3300012205\|Ga0137362_11486554	Not Available	564	Open in IMG/M
3300012208\|Ga0137376_10100840	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2445	Open in IMG/M
3300012208\|Ga0137376_10959198	All Organisms → cellular organisms → Bacteria	733	Open in IMG/M
3300012360\|Ga0137375_11227414	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	572	Open in IMG/M
3300012948\|Ga0126375_10157058	Not Available	1442	Open in IMG/M
3300012955\|Ga0164298_11294238	Not Available	558	Open in IMG/M
3300012971\|Ga0126369_12295260	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → unclassified Candidatus Udaeobacter → Candidatus Udaeobacter sp.	626	Open in IMG/M
3300012975\|Ga0134110_10454950	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	576	Open in IMG/M
3300015371\|Ga0132258_10464456	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	3158	Open in IMG/M
3300015372\|Ga0132256_101658512	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	749	Open in IMG/M
3300016294\|Ga0182041_11592171	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	603	Open in IMG/M
3300016341\|Ga0182035_10177640	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1663	Open in IMG/M
3300016357\|Ga0182032_10328379	All Organisms → Viruses → Predicted Viral	1217	Open in IMG/M
3300016357\|Ga0182032_11453218	Not Available	594	Open in IMG/M
3300016387\|Ga0182040_10038679	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2871	Open in IMG/M
3300016387\|Ga0182040_10551348	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	928	Open in IMG/M
3300016422\|Ga0182039_10318703	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1294	Open in IMG/M
3300018067\|Ga0184611_1235633	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	650	Open in IMG/M
3300019881\|Ga0193707_1178803	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	563	Open in IMG/M
3300021411\|Ga0193709_1038357	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1138	Open in IMG/M
3300021560\|Ga0126371_10346452	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1620	Open in IMG/M
3300021560\|Ga0126371_11520471	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → unclassified Candidatus Udaeobacter → Candidatus Udaeobacter sp.	797	Open in IMG/M
3300021560\|Ga0126371_12438022	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	633	Open in IMG/M
3300025898\|Ga0207692_10456802	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → unclassified Candidatus Udaeobacter → Candidatus Udaeobacter sp.	805	Open in IMG/M
3300025910\|Ga0207684_11202566	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	627	Open in IMG/M
3300025930\|Ga0207701_10091930	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2729	Open in IMG/M
3300026496\|Ga0257157_1087370	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	541	Open in IMG/M
3300027502\|Ga0209622_1000545	All Organisms → cellular organisms → Bacteria	4869	Open in IMG/M
3300030842\|Ga0075404_11556133	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1354	Open in IMG/M
3300031446\|Ga0170820_12150945	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1427	Open in IMG/M
3300031469\|Ga0170819_15130061	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	716	Open in IMG/M
3300031719\|Ga0306917_10256960	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1340	Open in IMG/M
3300031720\|Ga0307469_10377357	All Organisms → cellular organisms → Bacteria	1201	Open in IMG/M
3300031744\|Ga0306918_10824832	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	724	Open in IMG/M
3300031910\|Ga0306923_10385969	All Organisms → cellular organisms → Bacteria	1595	Open in IMG/M
3300031912\|Ga0306921_10126937	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2975	Open in IMG/M
3300031945\|Ga0310913_10978568	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	593	Open in IMG/M
3300032035\|Ga0310911_10036656	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2485	Open in IMG/M
3300032076\|Ga0306924_10231341	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2123	Open in IMG/M
3300032180\|Ga0307471_100086322	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2785	Open in IMG/M
3300032261\|Ga0306920_100026853	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	8150	Open in IMG/M
3300032261\|Ga0306920_102148785	Not Available	778	Open in IMG/M
3300033412\|Ga0310810_10170455	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2502	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	89.29%
Host-Associated	Host-Associated	10.71%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	88.57%
Plants	Host-Associated → Plants	10.71%
Aquatic	Environmental → Aquatic	0.71%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	88.57%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.43%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.29%
Sediment	Environmental → Aquatic → Sediment	0.71%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	60.71%
Loam	Environmental → Terrestrial → Soil → Loam	27.86%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.86%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.43%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.43%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.71%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	26.43%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	21.43%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	16.43%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	12.14%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.43%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	5.00%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.86%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.43%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.43%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.71%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.71%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	20.71%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	15.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	10.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	10.00%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.71%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	5.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.86%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	2.86%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.86%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.14%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	2.14%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	1.43%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.43%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.71%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.71%
Termite Nest	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Termite Nest	0.71%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.71%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.71%
Green-Waste Compost	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Green-Waste Compost	0.71%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.71%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.71%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.71%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.71%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.71%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.71%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2070309004	Green-waste compost microbial communities at University of California, Davis, USA, from solid state bioreactor - Luquillo Rain Forest, Puerto Rico	Environmental	Open in IMG/M
2088090014	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
2124908045	Soil microbial communities from Great Prairies - Kansas assembly 1 01_01_2011	Environmental	Open in IMG/M
2170459007	Grass soil microbial communities from Rothamsted Park, UK - March 2009 indirect in plug lysis (for fosmid construction) 10-21cm	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000580	Forest soil microbial communities from Amazon forest - 2010 replicate II A01	Environmental	Open in IMG/M
3300000881	Soil microbial communities from Great Prairies - Wisconsin Restored Prairie soil	Environmental	Open in IMG/M
3300000953	Soil microbial communities from Great Prairies - Kansas Corn soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300002899	Soil microbial communities from Manhattan, Kansas, USA - Combined assembly of Kansas soil 100-500um Nextera (ASSEMBLY_DATE=20140607)	Environmental	Open in IMG/M
3300003911	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300005983	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006169	Termite nest microbial communities from Madurai, India	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300018067	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coex	Environmental	Open in IMG/M
3300019881	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3c2	Environmental	Open in IMG/M
3300021411	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3c2	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300026496	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-69-A	Environmental	Open in IMG/M
3300027502	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300030842	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OB3 SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
prs_07207400	2070309004	Green-Waste Compost	DCGRSVTYWKLPPERKREARRRMKEREQMTGGLLLTRILERLKAAL
GPIPI_03214380	2088090014	Soil	MTQAQRQQLIEFGILTPDCGPSSKYSQLSPELKREVRRRMKERERMTGGLLLTRILVRLKRA
GPIPI_03227310	2088090014	Soil	MTQKERRQLIELGILTEDCGPSITYWKLSPELKREARRRMNEKERMTGGRLLSRILECLTRP
GPIPI_01312070	2088090014	Soil	MTQKERRQLIELGILTKDCGPSSTYWKLSAELKREAGRRMKERERMTGGHLLTRILELLKRA
GPIPI_02749000	2088090014	Soil	MGHLLCLNVLKMKNKMTQAQRQQLIEFGILTPDCGPSSKYWKLSPELKREARRRIKEKERMTGGLLLTRILERLKKA
KansclcFeb2_04512190	2124908045	Soil	VLKRRNKMTQVQRKQLIEWGILTPDCGPSIKYWKLSAELKREARRRMKERERMTGGLLLNRILERLKKGGTK
L02_06641150	2170459007	Grass Soil	LIELGILTEDCGPSISYWKLSPQVKREARRRMNERERMAGGLLLARILERLKRT
INPhiseqgaiiFebDRAFT_1003800512	3300000364	Soil	MTQAQRQQLIELGVLTPDCGPCIRYGRLSPELKREATRLMRERERMTGGLLLSRILERL
AF_2010_repII_A01DRAFT_10597312	3300000580	Forest Soil	VLKRRNNVTQIERRQLIELGILTPDCGPSTGYWKLSPELKREVRRQMKEKERMTGGLLLARILERLNGA*
JGI10215J12807_13568873	3300000881	Soil	MTQMERQQLIEFGILTPDCGPSSTYWKLSPELKREARRRMKERERMTGGLLLTRILERLKRA*
JGI11615J12901_105396161	3300000953	Soil	MTQVQRKQLIEWGILTPDCGPSIKYWKLSAELKREARRRMKERERMTGGLLLNRILERLKKGGTK*
JGI1027J12803_1004127853	3300000955	Soil	MTKVERQQLIELGILTEDCVPGITSRKPSPELKRQAIRRVKERELIFDRARPGLLLTRILNRLKTPH*
JGI1027J12803_1010137321	3300000955	Soil	LCLSVLKRRNEMTQKERLQLIELGVLTEDCGPSIRYWELSPQLKREARRRMSKRERMTGGLLLIRILERLKKG*
JGI1027J12803_1036037873	3300000955	Soil	MTQAQRQQLIELGVLTPDCGPCIRYGRLSPELKREATRLMRERERMTGGLLLSRILERLKTAH*
JGI1027J12803_1047454542	3300000955	Soil	MTLVERQQLIELGVLTPDCGPSITYWKLSPELKREARRRMKEREQMTGGHLLTRILERLKTMH*
JGI10216J12902_1020280262	3300000956	Soil	ILTPDCGPSIKYWKLSAELKREARRRMKERERMTGGLLLNRILERLKKGGTK*
JGI10216J12902_1125149801	3300000956	Soil	MTQKERRQLIELGILTEDCGPSITYWKLSPELKREARRRMYDRERMTGGRLLTRILERLKTG*
JGIcombinedJ43975_100018364	3300002899	Soil	MTQMERQQLIEFGILTPDCGPSTKYWKLSPELKREARRRMKERERMTGGLLLTRILVRLTRS*
JGI25405J52794_100155223	3300003911	Tabebuia Heterophylla Rhizosphere	MTQKERQQLIELGILTEDCGPSITYWKLSSQLKREARRRMNQRERMAGGGLLTRILERLKTD*
Ga0062593_1006927401	3300004114	Soil	GHLLCLNVLKMKNKMTQAQRQQLIEFGILTPDCGPSSKYWKLSPELKREARRRIKEKERMTGGLLLTRILERLKKA*
Ga0062593_1008517071	3300004114	Soil	MTQIERQKLIELGVLTPDCGPSLTYRKLPIELKREARRRIRDREGMTGGLLLTRILEQLKTAH*
Ga0062589_1018473751	3300004156	Soil	MTQMERQQLIEFGILTPDCGPSITYWKLSPELKREARRRMKERERMTGGLLLTRILERLKRA*
Ga0062590_1000889044	3300004157	Soil	MTQIERQKLIELGVLTPDCGPSLTYRKLPIELKREARRRIRNRERMTGGLLLTRILEQLKTAH
Ga0063356_1005177792	3300004463	Arabidopsis Thaliana Rhizosphere	MKNKMTQAQRQQLIEFGILTPDCGPSSKYWKLSPELKREARRRIKEKERMTGGLLLTRILERLKKA*
Ga0063356_1012395381	3300004463	Arabidopsis Thaliana Rhizosphere	MTQVEREKLIELGVLTPDCGPSVTYWKLPPERKREARRRMKEREQMTSGLLLSRILERLKTAYEWL*
Ga0063356_1059570102	3300004463	Arabidopsis Thaliana Rhizosphere	MTQKERRQLIELGILTKDCGPSSTYWKLSAELKREAGRRMKEREHMTGGHLLTRILELLKRA*
Ga0062595_1005006792	3300004479	Soil	MTQTQRQQLIEFGILTPDCGPSGKYSKLSPELKREVRRRMKERERMTGGLLLTRILERLKRA*
Ga0062595_1005441462	3300004479	Soil	MGHLLCLNVLKMKNKMTQAQRQQLIEFGILTPDCGPSSKYWKLSPELKREARRRIKEKERMTGGLLLTRILERLK
Ga0062594_1007352571	3300005093	Soil	MTQIERQKLIELGVLTPDCGPSLTYRKLPIELKREARRRIRDREGMTGGLLLTRIL
Ga0066676_100487443	3300005186	Soil	MTQKERRQLIKLGILTEDCGPSIIYWKLSPELKRQARRQMNERERMTEGLLLARILERLKRG*
Ga0065712_105871862	3300005290	Miscanthus Rhizosphere	MRQLERQQLIELGILTEECGPSISYWKLSPQVKREARRRMNERERMTGGLLLARILERLKRT*
Ga0065705_102451073	3300005294	Switchgrass Rhizosphere	NSMTQMERQQLIEFGILTPDCGPSSTYWKLSPELKREARRRMKERERMTGGLLLTRILERLKRA*
Ga0065707_101825812	3300005295	Switchgrass Rhizosphere	MTQVERQQLIEFGILTPDCGPSITYWKLSPELKREARRRMKERERMTGGLLLTRILERLKGA*
Ga0066388_1000221845	3300005332	Tropical Forest Soil	MTQMERQKLIEMGVLTPDCGPGITYWKLSPELKREARRRMKKREQMTGGLLLTRILQRLKTAH*
Ga0066388_1001847543	3300005332	Tropical Forest Soil	MTQAERQQLIEFGILTPDCGPSITYWKLSPELKQEARRRMKERERMTGGLLLTRILERLKRA*
Ga0066388_1002329652	3300005332	Tropical Forest Soil	MTQMERQKLINLGVLTPDCGPSIRYCKLSPELKREARRRMQRREQMTGGLLLTRILERLKTAN*
Ga0066388_1002688784	3300005332	Tropical Forest Soil	MTQMERQQLIEFGILTPDCGPSSTYWKLSPELKREARRRMKERERMTGGLLLTRILERLKKA*
Ga0066388_1008373732	3300005332	Tropical Forest Soil	MTQIERQKLIEFGVLTPDCGPGITYGKLSPELKQETRQRMKERERMTSGLLLTRILAGLKKAH*
Ga0066388_1009632651	3300005332	Tropical Forest Soil	MTQIERQKLIEFGVLTPDCGPGNTYGNLSPELKQETRRRMKERERMTGGLLLTRILEG
Ga0066388_1018254732	3300005332	Tropical Forest Soil	MTQKERRQLIDLGILTEDCGPNINYWKLSPELKREARRRMNERERMTGGRLLTRILEHLRG*
Ga0066388_1018801122	3300005332	Tropical Forest Soil	MNNMTQIERQQLIELGILTPDCGPSIAYWKLSPELKREARRRMKEREGMTGGLLLARVLERLKRA*
Ga0066388_1020091913	3300005332	Tropical Forest Soil	LIELEILTEDCGPSITYWKLSPHLKREARQRMNERERMTGGLLLTRILERLKRA*
Ga0066388_1020355722	3300005332	Tropical Forest Soil	MTQIERQKLIEFGVLTPDCGPGIMYGKLSPDLKQETRQWMKERERMTGGLLLTRILEGLKKAH*
Ga0066388_1024097341	3300005332	Tropical Forest Soil	MTQIERQKLIEFGVLTPDCGPGIAYGKLSAELKQEKRRRMKERECMTGGLLLSRILESLKKAH*
Ga0066388_1028789283	3300005332	Tropical Forest Soil	MTRVEREKLIDLGILTPDCGPGMTYWKLPPELKRQARQRMKEKEQMTGGLLLTR
Ga0066388_1047582291	3300005332	Tropical Forest Soil	RQKLIEFGVLTPDCGPGITYGKLSPELKQETRRLMKQRERMTGGLLLTRILEGLKKAH*
Ga0066388_1059472251	3300005332	Tropical Forest Soil	MTQMERQKLIELGVLTPDCGPSITYWKLSPELKREARQRMMEREQMTGGLLLIRILERLKTAH*
Ga0066388_1069271431	3300005332	Tropical Forest Soil	MTQVEREKLIELGVLTPDCGPGMTYWKLPPELKRQARQRMKEKEQMTGGLLLTR
Ga0070671_1010418972	3300005355	Switchgrass Rhizosphere	MRQLERQQLIELGILTEECGPSISYWKLSPQVKREARRRMDERERMTGGLLLARILERLKRT*
Ga0070708_1018489012	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	LLCLNVLKRRSKMTQAERQQLIELGILTPDCGPSITYWKLSPELKQEARRRMKERERMTGGLLLTRILDHLKRV*
Ga0070706_1001120303	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MTQKERRQLIELRILTPDCGPTITYWKLSPQLKREARRRMNDRERMTGGLLLTRILEHLKRA*
Ga0070698_1011743711	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MTQKERRQLIELRILTPDCGPTITYWKLSPQLKREVRRRMNERERMTGGLLLTRILE
Ga0070699_1015995782	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MLKRRSKMTQAERQQLIELGILTPDCGPSITYWKLSPELKQEARRRMKERERMTGGLLLTRILDHLKRV*
Ga0070684_1005270851	3300005535	Corn Rhizosphere	MTQIERQKLIELGVLTPDCGPSLTYRKLPIELKREARRRIRDREGMTGGLLLTRILE*
Ga0070697_1000889386	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MTQAERQQLIELGILTPDCGPSITYWKLSPELKQETRRRMKERERMTGGLLLTRILDHLKRV*
Ga0066905_1002951312	3300005713	Tropical Forest Soil	MTQNERRQLIELGILTEDCGPSITYWKLSPQLKRQARRRMNERERMTGGRLLSRILERLKRP*
Ga0066903_10000118512	3300005764	Tropical Forest Soil	MTQKERRQLIELGVLTEDCSPSITYWKLSPELKREARRRMAEREHMTGGLLLTRILERLRKG*
Ga0066903_1000063176	3300005764	Tropical Forest Soil	MTQMDRQQLIELGVLTPDCGPSDTYWRLSAELKREARQRMKEREEMTGGRLLMRILKRLKTAH*
Ga0066903_1000928212	3300005764	Tropical Forest Soil	MTQMERQKLIELGVLTPDCGPSITYWKLSPELKREDRQRMKEKEQMTGGLLLIRILERLKRAH*
Ga0066903_1001314604	3300005764	Tropical Forest Soil	MTQMERQRLIELGVLTPDCGPSIRYSKLSPELKREARQRMKQREQMTGGLLLIRILERLKTAH*
Ga0066903_1011556431	3300005764	Tropical Forest Soil	MTRVEREKLIDLGILTPDCGPGMTYWKLSPELKRQARQRMKEKEQMTGGLLLTRILERLKAAH*
Ga0066903_1014752672	3300005764	Tropical Forest Soil	MTQIERQKLIEFGVLTPDCGPGITYGKLSPELKQETRRLMKQRERMTGGLLLTRILEGLKKAH*
Ga0066903_1016513063	3300005764	Tropical Forest Soil	MTQMDRQHLIELGVLTPDCGPGDTYWKLSPELKREARQRMKEREEMTGGRLLMRILERLKTAH*
Ga0066903_1018058511	3300005764	Tropical Forest Soil	MTQAERQKLIEMGVLTPDCGPGSKYWNLSPQLKREARRRMNQREKMAGGLLLARILERIKTAHQ
Ga0066903_1018601533	3300005764	Tropical Forest Soil	LIELGILTEDCGPTITYWKLSPQLKREARRRMNEKERMTGGRLLTRILERLKGA*
Ga0066903_1036916243	3300005764	Tropical Forest Soil	MTQAERQQLIELGILTPDCGPSIMYWKLSPDLKREARRQMKKRERMTGGLLLTRILERLKRA*
Ga0066903_1042092993	3300005764	Tropical Forest Soil	MTQVERQQLIELGVLTPDCGPSITYWRLSLELKREARQRMKERERMTGGLLLVRILQRLKRA*
Ga0066903_1058011882	3300005764	Tropical Forest Soil	MTQIDRQQLIELGVLTPDCGPSDTYWKLSKELKREARQRMKKREEMTGGRLLMRILERLK
Ga0066903_1072038162	3300005764	Tropical Forest Soil	MTQVERQKLIELGVLTPDCGPSIRYWKLSPELKREARRRMKEREQMTGGLLLARILERSKTAH*
Ga0081455_101655022	3300005937	Tabebuia Heterophylla Rhizosphere	MTQVERQKLIDLGVLTPDCGLSVTYWKLSPELKREARRRMKEREQMTGGLLLIRILERLKTAH*
Ga0081455_103938652	3300005937	Tabebuia Heterophylla Rhizosphere	MTQKQRRQLIELGILTEDCGPSITYWKLSPQLKREARRRMSNRERMAGGGLLSQVLERLKRG*
Ga0081540_10845081	3300005983	Tabebuia Heterophylla Rhizosphere	GPGITYWKLSPELKREARRRMKEREQMTGGLLLTRILQRLKTAH*
Ga0070715_108694452	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MRQLERQQLIELGILTEECGPSISYWKLSPQVKREARRRMNERERMAGGLLLARILERLKRT*
Ga0082029_131375010	3300006169	Termite Nest	MTQIERQKLIQLGVLTPDCGPGNTYCKLSPELKRKARRRMQERERMSGGLLLARILERLKTAH*
Ga0075428_1015494452	3300006844	Populus Rhizosphere	MTQAQRQQLIEFGILTPDCGLSSKYSKLSPELKREVRQRMKERERMTSGLLLTRILEHLTKA*
Ga0075428_1020669871	3300006844	Populus Rhizosphere	GILTPDCGLSSKYSKLSPELKREVRQRMKARERMTGGLLLTRILEHLTKA*
Ga0075434_1005767542	3300006871	Populus Rhizosphere	MTQAQRQQLIEFGILTPDCGLSSKYSKLSPELKREVRQRMKARERMTGGLLLTRILEHLTKA*
Ga0099791_100759953	3300007255	Vadose Zone Soil	LIELGILTEDCGLSISYWKLSPQVKREARRRINERERMTGGLLLARILERLKRT*
Ga0114129_1004304010	3300009147	Populus Rhizosphere	MTQKERRQLIELGILTDDCGPSITYWKLSPELKREARRQMNQRERMTGGRLLTRILGCLKRT*
Ga0126380_106413461	3300010043	Tropical Forest Soil	NVLKRRNGMTQMERQKLINLGVLTPDCGPSIRYCKLSPELKREARRRMQRREQMTGGLLLTRILERLKTAN*
Ga0126380_108114062	3300010043	Tropical Forest Soil	LIEFGVLTPDCGPGITYGKLSPELKQETRQRMKERERMTSGLLLTRILAGLKKAH*
Ga0126380_117031332	3300010043	Tropical Forest Soil	MTQTDRQQLIELGVLTPDCGPSDTYWKLSPELKREARQRMKEREEMTGGRLLMKILEHLRTAH*
Ga0126384_107554571	3300010046	Tropical Forest Soil	VLKRAQKEDAKVTQKERQQLIDLGILTEDCGPSIKYWKLSPELKREARRRMNERERMAGGHLLTRILERLKRD*
Ga0126382_107221072	3300010047	Tropical Forest Soil	MTLMERQKLIELGVLTPDCGPSITYWKLSPELKREARQRMKKREQMTGGLLLTRILERLKTAH*
Ga0126373_105875472	3300010048	Tropical Forest Soil	LIELGILTEDCGPSMTYWKLSPELKREARRRMNQRERMTGGRLLTRILECLNRA*
Ga0126373_132732671	3300010048	Tropical Forest Soil	QVERQQLIELGILTPDCGPSITYCKLSPELKREARRRMKEREQMTGGLLLTRILERLKRA
Ga0126370_103840922	3300010358	Tropical Forest Soil	ARKRILSHFVVLKCAQKGETMTQVERQQLIELGVLTPDCGPSITYWKLSPELKREDRQRMKEKEQMTGGLLLIRILERLKRAH*
Ga0126376_126671741	3300010359	Tropical Forest Soil	MTQVERQELIELGILTSDCGPSVTYRNLSPELKREARRRMKEREQMTGGLLLNRILERLKAAH*
Ga0126372_100455184	3300010360	Tropical Forest Soil	MTQIERQKLIEFGVLTPDCGPGITYGKLSPELKQETRQRMKERERMTSGLLLTRILEGLKKAH*
Ga0126372_133328301	3300010360	Tropical Forest Soil	IELGILTEDCGPSITYWKLSPQLKQEARRRMNERERMTGGLLLTRILERLKRT*
Ga0126377_108598563	3300010362	Tropical Forest Soil	MTQIERQKLIEFGVLTPDCGPGITYGNLSPELKQETRRRMKERERMTGGLLLTRILEGLKKAH*
Ga0126381_1000065758	3300010376	Tropical Forest Soil	MERQKLIELGVLTPDCGPGIIYWKLSPELQREARQRMKEREQMTGGLLLIRILERLKTAH
Ga0126381_1014894852	3300010376	Tropical Forest Soil	MTKLERQKLIELGVLTPDCGPSIKYCKLSPELKREARRRFRAREQMTGGLLLTRILERLKTAH*
Ga0126381_1025941452	3300010376	Tropical Forest Soil	MTQAERQQLIELGILTPDCGPSIMYWKLSPDLKREARRQMKERERMTGGLLLTRILER
Ga0126381_1032645462	3300010376	Tropical Forest Soil	MTQKEREQLIELGILTEDCGPSTTYWKLSPQLKREARRRMNERERMTGGHLLSRILERLKRG*
Ga0137364_109174452	3300012198	Vadose Zone Soil	QGEREKLIESGVLTPDCGPSVTYWKLSPERKQEARRRMEEREQMTGGLLLSRILERLKTAHYWLNRKEE*
Ga0137364_112109261	3300012198	Vadose Zone Soil	VLKRRNNMTQVERQQLIEFGILTPDCGPSITYWTLSPELKREARRRMKERERMTGGLLLIRILERLKRA*
Ga0137362_114865541	3300012205	Vadose Zone Soil	MTQVERQKLIELEVLTPECGPSVTYRKLSPGLKREARRRMQGREQMTGGLLLTRILELLKIGLES*
Ga0137376_101008402	3300012208	Vadose Zone Soil	MTQVERQQLIEFGILTPDCGPSITYWTLSPELKREARRRMKERERMTGGLLLIRILERLKRA*
Ga0137376_109591982	3300012208	Vadose Zone Soil	VLNRRNNMTQGEREKLIESGVLTPDCGPSVTYWKLSPERKQEARRRMEEREQMTGGLLLSRILERLKTAHYWLNRKEE*
Ga0137375_112274141	3300012360	Vadose Zone Soil	VERQQLIEFGILTPDCGPSITYWKLSPKLKREARRRMKERERMTGGLLLTRILERLKRA*
Ga0126375_101570583	3300012948	Tropical Forest Soil	MTQAERQELIELGVLTPDCGPSIMYSKLSPELKREARRRMKEREQMTGGLLLTRILERLKVAH*
Ga0164298_112942381	3300012955	Soil	MTLMEVQKLIELGILTPDCGPSATYGTLSPELKREATGWMKERERVTGGRLLSRILALDDRK
Ga0126369_122952602	3300012971	Tropical Forest Soil	LIELGVLTEDCSPSITYWKLSPELKREARRRMAEREHMTGGLLLTRILERLRKG*
Ga0134110_104549502	3300012975	Grasslands Soil	MTQKERRQLIKLGILTEDCGPSIIYWKLSPELKRQARRQMNERERMTEGLLLACRLSSGD
Ga0132258_104644561	3300015371	Arabidopsis Rhizosphere	MTQAERQKLIDLGVLTPDCGPSVTYWKLPPERKREARRRMKEREQMTSGLLLSRILERLKTAYEWL*
Ga0132256_1016585123	3300015372	Arabidopsis Rhizosphere	RQLERQQLIELGILTEECGPSISYWKLSPQVKREARRRMDERERMTGGLLLARILERLKRT*
Ga0182041_115921711	3300016294	Soil	MTQMERQKLIEFGVLTPDCGTGMTYQKLSPALKREARRQMKERQQMTTGLLLTRILERLKTAH
Ga0182035_101776401	3300016341	Soil	MTQVERQKLIEFGVLTPDCGPSITYCKLSPELKREARRRMKEREQMTGGLLLIRILERLKRA
Ga0182032_103283793	3300016357	Soil	GILTPDCGPSVKYWKQSPELKREARRRMKERERMTSGLFLNRILERLKKGGTK
Ga0182032_114532182	3300016357	Soil	MTQAQRQELIELGVLTPDCGPSINYSKLSPELKLEVRRRMRERERMTGGLLLSRILERLKMAH
Ga0182040_100386791	3300016387	Soil	MRNNMTQVERQKLIEFGVLTPDCGPSITYQKLSPELKREARRRMKKREQMTGGLLLTRILERLKIAS
Ga0182040_105513484	3300016387	Soil	MTQVERQQLIELGILTPDCGPSVKYWKQSPDRTRESRAWMKERERRTSVLFLNRTMERI
Ga0182039_103187031	3300016422	Soil	NVLKRRNNMTQVERQKLIEFGVLTPDCGPSITYQKLSPELKREARRRMKKREQMTGGLLLTRILERLKIAS
Ga0184611_12356331	3300018067	Groundwater Sediment	MTQVQRRELIELGILTPDCGSSIKYWKLSPELKREARRRIKESERMTGGLLLNRILECLKEGGTK
Ga0193707_11788031	3300019881	Soil	MTQVQRQKLIELGILTPDCDPTSQRLTAERKREARRRMKERERMTGLLLTRILERLKGA
Ga0193709_10383572	3300021411	Soil	LIELGILTEDCGPSISYWKLPPQVKREARRRMNERERMAGGLLLARILERLKRT
Ga0126371_103464521	3300021560	Tropical Forest Soil	MTRVEREKLIDLGILTPDCGPGMTYWKLSPELKRQARQRMKEKEQMTGGLLLTRILERLKAAH
Ga0126371_115204712	3300021560	Tropical Forest Soil	MTQKERRQLIELEILTEDCGPSITYWKLSPHLKREARQRMNERERMTGGLLLTRILERLKRA
Ga0126371_124380223	3300021560	Tropical Forest Soil	MTQKERRQLIELGILTKDCGLTVTYWKLSPQLKREARRRMNEKERMTGGRLLTRILDRLKGA
Ga0207692_104568021	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	ELGILTEDCGPSISYWKLSPQVKREARRRMNERERMAGGLLLARILERLKRT
Ga0207684_112025661	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MTQKERRQLIELGILTEDCGPSISYWKLSPQVKREARRRMNERERMAGGLLLARILEHLKRT
Ga0207701_100919302	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MTQIERQKLIELGVLTPDCGPSLTYRKLPIELKREARRRIRDREGMTGGLLLTRILEQLKTAH
Ga0257157_10873703	3300026496	Soil	LIELGILTEDCGLSISYWKLSPQVKREARRRINERERMTGGLLLARILERLKRT
Ga0209622_10005456	3300027502	Forest Soil	MTQAERQQLIELGILTPDCGPSITYWKLSPELKREVRRRMKERERMTSGLLLTRILERLKRV
Ga0075404_115561332	3300030842	Soil	MRQVERQQLIELGILTPDCGPSITYWKLSPELKREARRRMKERERMTGGLLLTRILERLKRA
Ga0170820_121509453	3300031446	Forest Soil	MTQVERQQLIEFGILTPDCGPSITYWKLSPELKREARRRMKERERMTGGLLLTRILERLKRA
Ga0170819_151300611	3300031469	Forest Soil	MTQVERQQLIEFGILTPDCGPSITYWKLSPELKREARRRMKERERMTGGLFLTRILERLKSA
Ga0306917_102569603	3300031719	Soil	MTQVERQKLIEFGVLTPDCGPSITYQKLSPELKREARRRMKKREQMTGGLLLTRILERLKIAS
Ga0307469_103773573	3300031720	Hardwood Forest Soil	MTQAERQQLIELGILTPDCGPSITYWKLSPELKQEARRRMKERERMTGGLLLTRILDHL
Ga0306918_108248321	3300031744	Soil	MTQVERQQLIELGILTPDCGPSITYQKLSPELKREARRRMKKREQMTGGLLLTRI
Ga0306923_103859691	3300031910	Soil	MTQVERQQLIELGILTPDCGPSVKYWKQSPELKREARRRMKERERMTSGLFLNRILERLKKGGTK
Ga0306921_101269374	3300031912	Soil	MTQVERQQLIELGILTPDCGPSITYCKLSPELKREGRRRMKEREQMTGGLLLTRILERLKRA
Ga0310913_109785682	3300031945	Soil	MTQVERQKLIEFGVLTPDCGPSITYQKLSPELKREARRRMKKREQMTGGLLLTRILE
Ga0310911_100366565	3300032035	Soil	MTQVERQQLIELGILTPDCGPSITYCKLSPELKREARRRMKEREQMTGGLLLTRILERLKRA
Ga0306924_102313411	3300032076	Soil	FGVLTPDCGPSITYQKLSPELKREARRRMKKREQMTGGLLLTRILERLKIAS
Ga0307471_1000863222	3300032180	Hardwood Forest Soil	MTQAERQQLIELGILTPDCGPSITYWKLSPELKQEARRRMKERERMTGGLLLTRILDHLKRV
Ga0306920_1000268535	3300032261	Soil	MTQMERQKLIEFGVLTPDCGTGMTYQKLSPALKREARRQMKEREQMTTGLLLTRILERLKTAH
Ga0306920_1021487852	3300032261	Soil	MRNNMTQAQRQKLIELGVLTPDCGPSINYSKLSPELKLEVRRRMRERERMTGGLLLSRILERLKMAH
Ga0310810_101704553	3300033412	Soil	MTQKERRQLIEFGILTPDCGPSITYWKLSPQLKREARRRMNERERMTGGLLLTRILEHLKRA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F054369

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences