Metagenome / Metatranscriptome Family F054367

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F054367
Family Type	Metagenome / Metatranscriptome
Number of Sequences	140
Average Sequence Length	60 residues
Representative Sequence	MTRTLRWLWIAPGFLAALALSCGTAAAADKTKVDQATKRVERGAKQIGQGQVGPGFKEMF
Number of Associated Samples	105
Number of Associated Scaffolds	140

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	95.90 %
% of genes near scaffold ends (potentially truncated)	81.43 %
% of genes from short scaffolds (< 2000 bps)	75.00 %
Associated GOLD sequencing projects	97
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.27

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (67.143 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (23.571 % of family members)
Environment Ontology (ENVO)	Unclassified (30.714 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (39.286 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 52.27% β-sheet: 0.00% Coil/Unstructured: 47.73%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.27
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.27
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 140 Family Scaffolds
PF04392	ABC_sub_bind	3.57
PF00005	ABC_tran	2.86
PF04679	DNA_ligase_A_C	2.86
PF13649	Methyltransf_25	2.14
PF02518	HATPase_c	2.14
PF12697	Abhydrolase_6	2.14
PF05494	MlaC	2.14
PF13365	Trypsin_2	1.43
PF00561	Abhydrolase_1	1.43
PF03061	4HBT	1.43
PF07690	MFS_1	1.43
PF00578	AhpC-TSA	1.43
PF00903	Glyoxalase	1.43
PF00571	CBS	1.43
PF00072	Response_reg	1.43
PF10294	Methyltransf_16	0.71
PF02515	CoA_transf_3	0.71
PF02738	MoCoBD_1	0.71
PF13424	TPR_12	0.71
PF12836	HHH_3	0.71
PF07687	M20_dimer	0.71
PF00296	Bac_luciferase	0.71
PF04909	Amidohydro_2	0.71
PF09861	Lar_N	0.71
PF13416	SBP_bac_8	0.71
PF12092	DUF3568	0.71
PF00528	BPD_transp_1	0.71
PF13243	SQHop_cyclase_C	0.71
PF02661	Fic	0.71
PF12146	Hydrolase_4	0.71
PF00211	Guanylate_cyc	0.71
PF01315	Ald_Xan_dh_C	0.71
PF13483	Lactamase_B_3	0.71
PF00300	His_Phos_1	0.71
PF13561	adh_short_C2	0.71
PF00582	Usp	0.71

COG ID	Name	Functional Category	% Frequency in 140 Family Scaffolds
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	3.57
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	2.86
COG2854	Periplasmic subunit MlaC of the ABC-type intermembrane phospholipid transporter Mla	Cell wall/membrane/envelope biogenesis [M]	2.14
COG1804	Crotonobetainyl-CoA:carnitine CoA-transferase CaiB and related acyl-CoA transferases	Lipid transport and metabolism [I]	0.71
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	0.71
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	0.71

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	67.14 %
Unclassified	root	N/A	32.86 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	67.14 %
Unclassified	root	N/A	32.86 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	67.14 %
Unclassified	root	N/A	32.86 %

Name	Rank	Taxonomy	Distribution
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	36.43 %
Unclassified	root	N/A	32.86 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	6.43 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2.14 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.43 %
Nitrospinae/Tectomicrobia group	clade	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group	0.71 %

Name	Rank	Taxonomy	Distribution
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	36.43 %
Unclassified	root	N/A	32.86 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4.29 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2.14 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	1.43 %
Candidatus Tectomicrobia	phylum	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia	0.71 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	35.71 %
Unclassified	root	N/A	32.86 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2.14 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.43 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.43 %
Candidatus Entotheonella	genus	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	0.71 %
candidate division NC10	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.86 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	29.29 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.43 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.43 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.71 %
Candidatus Entotheonella	genus	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	0.71 %
candidate division NC10	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.86 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	28.57 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.43 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.43 %
Candidatus Rokubacteria bacterium RIFCSPLOWO2_02_FULL_68_19	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium RIFCSPLOWO2_02_FULL_68_19	0.71 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.71 %
Candidatus Entotheonella	genus	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	0.71 %
candidate division NC10	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10	0.71 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_100567722	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1027	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_100572522	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	704	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_100694260	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	613	Open in IMG/M
3300004633\|Ga0066395_10543960	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	674	Open in IMG/M
3300004633\|Ga0066395_10704104	All Organisms → cellular organisms → Bacteria	600	Open in IMG/M
3300005186\|Ga0066676_10682635	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	699	Open in IMG/M
3300005332\|Ga0066388_101856327	All Organisms → cellular organisms → Bacteria	1074	Open in IMG/M
3300005332\|Ga0066388_104014011	Not Available	750	Open in IMG/M
3300005440\|Ga0070705_100040853	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2641	Open in IMG/M
3300005441\|Ga0070700_100489747	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	944	Open in IMG/M
3300005444\|Ga0070694_100135883	All Organisms → cellular organisms → Bacteria	1782	Open in IMG/M
3300005447\|Ga0066689_10593901	All Organisms → cellular organisms → Bacteria	698	Open in IMG/M
3300005450\|Ga0066682_10294592	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	1047	Open in IMG/M
3300005468\|Ga0070707_100187697	All Organisms → cellular organisms → Bacteria	2015	Open in IMG/M
3300005471\|Ga0070698_101059480	All Organisms → cellular organisms → Bacteria	759	Open in IMG/M
3300005545\|Ga0070695_100277137	Not Available	1231	Open in IMG/M
3300005557\|Ga0066704_10064472	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2345	Open in IMG/M
3300005559\|Ga0066700_10244487	Not Available	1252	Open in IMG/M
3300005559\|Ga0066700_10867294	All Organisms → cellular organisms → Bacteria	602	Open in IMG/M
3300005842\|Ga0068858_100479761	All Organisms → cellular organisms → Bacteria	1200	Open in IMG/M
3300005843\|Ga0068860_101139996	All Organisms → cellular organisms → Bacteria → Proteobacteria	799	Open in IMG/M
3300006163\|Ga0070715_10915470	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	541	Open in IMG/M
3300006796\|Ga0066665_10013508	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4856	Open in IMG/M
3300006797\|Ga0066659_10424539	All Organisms → cellular organisms → Bacteria	1051	Open in IMG/M
3300006806\|Ga0079220_10125746	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1374	Open in IMG/M
3300006852\|Ga0075433_10081759	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2849	Open in IMG/M
3300006852\|Ga0075433_10373751	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1259	Open in IMG/M
3300006854\|Ga0075425_102292563	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	600	Open in IMG/M
3300009012\|Ga0066710_100173601	All Organisms → cellular organisms → Bacteria	3034	Open in IMG/M
3300009012\|Ga0066710_100995622	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1293	Open in IMG/M
3300009012\|Ga0066710_102791797	All Organisms → cellular organisms → Bacteria	691	Open in IMG/M
3300009012\|Ga0066710_103552902	All Organisms → cellular organisms → Bacteria	589	Open in IMG/M
3300009038\|Ga0099829_10224312	Not Available	1527	Open in IMG/M
3300009038\|Ga0099829_11103648	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	658	Open in IMG/M
3300009038\|Ga0099829_11505657	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	556	Open in IMG/M
3300009088\|Ga0099830_11284883	Not Available	608	Open in IMG/M
3300009089\|Ga0099828_10109193	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2403	Open in IMG/M
3300009089\|Ga0099828_11309573	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	641	Open in IMG/M
3300009089\|Ga0099828_11915499	Not Available	520	Open in IMG/M
3300009101\|Ga0105247_10570281	All Organisms → cellular organisms → Bacteria	835	Open in IMG/M
3300009792\|Ga0126374_10381366	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	978	Open in IMG/M
3300009821\|Ga0105064_1027491	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1060	Open in IMG/M
3300009822\|Ga0105066_1046392	Not Available	906	Open in IMG/M
3300010043\|Ga0126380_10068769	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1999	Open in IMG/M
3300010046\|Ga0126384_12203188	Not Available	530	Open in IMG/M
3300010047\|Ga0126382_10442781	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1027	Open in IMG/M
3300010048\|Ga0126373_12848739	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	540	Open in IMG/M
3300010304\|Ga0134088_10202499	Not Available	950	Open in IMG/M
3300010359\|Ga0126376_10803640	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	918	Open in IMG/M
3300010359\|Ga0126376_12667082	Not Available	549	Open in IMG/M
3300010359\|Ga0126376_12719300	Not Available	544	Open in IMG/M
3300010360\|Ga0126372_11242530	Not Available	771	Open in IMG/M
3300010360\|Ga0126372_11604152	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	689	Open in IMG/M
3300010361\|Ga0126378_12135137	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	639	Open in IMG/M
3300010362\|Ga0126377_10838402	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	980	Open in IMG/M
3300010362\|Ga0126377_13612215	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	500	Open in IMG/M
3300010366\|Ga0126379_12830055	Not Available	580	Open in IMG/M
3300010397\|Ga0134124_10086400	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2706	Open in IMG/M
3300010397\|Ga0134124_11409548	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	723	Open in IMG/M
3300010399\|Ga0134127_13606420	All Organisms → cellular organisms → Bacteria → Proteobacteria	508	Open in IMG/M
3300011269\|Ga0137392_10698179	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	840	Open in IMG/M
3300011271\|Ga0137393_11075221	Not Available	684	Open in IMG/M
3300012096\|Ga0137389_10911071	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	754	Open in IMG/M
3300012205\|Ga0137362_10409833	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1174	Open in IMG/M
3300012209\|Ga0137379_10506406	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1115	Open in IMG/M
3300012210\|Ga0137378_10141373	Not Available	2228	Open in IMG/M
3300012210\|Ga0137378_11808031	All Organisms → cellular organisms → Bacteria	515	Open in IMG/M
3300012285\|Ga0137370_10938414	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	534	Open in IMG/M
3300012355\|Ga0137369_10317323	All Organisms → cellular organisms → Bacteria	1150	Open in IMG/M
3300012357\|Ga0137384_10059141	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	3177	Open in IMG/M
3300012362\|Ga0137361_10460010	Not Available	1169	Open in IMG/M
3300012363\|Ga0137390_10461938	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1245	Open in IMG/M
3300012685\|Ga0137397_10100162	All Organisms → cellular organisms → Bacteria	2124	Open in IMG/M
3300012918\|Ga0137396_10964249	Not Available	620	Open in IMG/M
3300012971\|Ga0126369_13565979	Not Available	510	Open in IMG/M
3300014968\|Ga0157379_11157657	All Organisms → cellular organisms → Bacteria → Proteobacteria	742	Open in IMG/M
3300016270\|Ga0182036_10173735	Not Available	1556	Open in IMG/M
3300016294\|Ga0182041_12141265	Not Available	522	Open in IMG/M
3300018056\|Ga0184623_10230191	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	849	Open in IMG/M
3300018076\|Ga0184609_10430529	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	609	Open in IMG/M
3300018468\|Ga0066662_11542739	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	692	Open in IMG/M
3300018482\|Ga0066669_12104316	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	532	Open in IMG/M
3300019254\|Ga0184641_1145835	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	746	Open in IMG/M
3300025560\|Ga0210108_1024856	All Organisms → cellular organisms → Bacteria	1099	Open in IMG/M
3300025905\|Ga0207685_10212092	All Organisms → cellular organisms → Bacteria	916	Open in IMG/M
3300025922\|Ga0207646_10050676	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3715	Open in IMG/M
3300025922\|Ga0207646_11895765	All Organisms → cellular organisms → Bacteria	508	Open in IMG/M
3300026075\|Ga0207708_10458113	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1063	Open in IMG/M
3300026334\|Ga0209377_1286850	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	546	Open in IMG/M
3300026497\|Ga0257164_1091978	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	520	Open in IMG/M
3300026532\|Ga0209160_1113836	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1344	Open in IMG/M
3300026540\|Ga0209376_1415251	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	503	Open in IMG/M
3300027169\|Ga0209897_1009373	All Organisms → cellular organisms → Bacteria	1306	Open in IMG/M
3300027324\|Ga0209845_1042795	Not Available	718	Open in IMG/M
3300027643\|Ga0209076_1095034	All Organisms → cellular organisms → Bacteria	846	Open in IMG/M
3300027846\|Ga0209180_10030060	All Organisms → cellular organisms → Bacteria	2924	Open in IMG/M
3300027846\|Ga0209180_10037707	All Organisms → cellular organisms → Bacteria	2627	Open in IMG/M
3300027846\|Ga0209180_10449093	Not Available	726	Open in IMG/M
3300027846\|Ga0209180_10626913	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	592	Open in IMG/M
3300027862\|Ga0209701_10619314	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	571	Open in IMG/M
3300027862\|Ga0209701_10659491	Not Available	545	Open in IMG/M
3300027875\|Ga0209283_10128860	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium RIFCSPLOWO2_02_FULL_68_19	1671	Open in IMG/M
3300027875\|Ga0209283_10140288	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1600	Open in IMG/M
3300027875\|Ga0209283_10547213	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	740	Open in IMG/M
3300027910\|Ga0209583_10009903	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2794	Open in IMG/M
3300027961\|Ga0209853_1069257	Not Available	940	Open in IMG/M
3300028673\|Ga0257175_1061365	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	702	Open in IMG/M
3300028828\|Ga0307312_10387031	All Organisms → cellular organisms → Bacteria	917	Open in IMG/M
3300030619\|Ga0268386_10599856	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	735	Open in IMG/M
3300031720\|Ga0307469_10657827	All Organisms → cellular organisms → Bacteria	945	Open in IMG/M
3300031720\|Ga0307469_11402823	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	666	Open in IMG/M
3300031795\|Ga0318557_10025983	All Organisms → cellular organisms → Bacteria	2330	Open in IMG/M
3300031820\|Ga0307473_10041784	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2098	Open in IMG/M
3300031820\|Ga0307473_10677497	All Organisms → cellular organisms → Bacteria	721	Open in IMG/M
3300031945\|Ga0310913_10683019	Not Available	726	Open in IMG/M
3300031946\|Ga0310910_10954190	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	671	Open in IMG/M
3300032005\|Ga0307411_10723483	Not Available	869	Open in IMG/M
3300032054\|Ga0318570_10367380	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	655	Open in IMG/M
3300032205\|Ga0307472_100662555	Not Available	932	Open in IMG/M
3300032205\|Ga0307472_101539018	All Organisms → cellular organisms → Bacteria	651	Open in IMG/M
3300033004\|Ga0335084_11612247	Not Available	639	Open in IMG/M
3300034659\|Ga0314780_084692	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10	698	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	92.14%
Host-Associated	Host-Associated	7.86%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	88.57%
Plants	Host-Associated → Plants	7.86%
Aquatic	Environmental → Aquatic	3.57%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	88.57%
Rhizosphere	Host-Associated → Plants → Rhizosphere	6.43%
Sediment	Environmental → Aquatic → Sediment	2.14%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.43%
Freshwater	Environmental → Aquatic → Freshwater	0.71%
Marine	Environmental → Aquatic → Marine	0.71%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	71.43%
Loam	Environmental → Terrestrial → Soil → Loam	12.86%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.43%
Sand	Environmental → Terrestrial → Soil → Sand	3.57%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.14%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.43%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.71%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.71%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.71%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	42.14%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	14.29%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	10.71%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.57%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.43%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	3.57%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.57%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	3.57%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.14%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.43%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.71%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.71%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.71%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.71%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	0.71%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	23.57%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	12.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	10.00%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	8.57%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	5.00%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	4.29%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.29%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.29%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	3.57%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.57%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	3.57%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.14%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.43%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.43%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.43%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.43%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.43%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.71%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.71%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.71%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.71%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.71%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	0.71%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.71%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.71%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.71%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300002121	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_1	Environmental	Open in IMG/M
3300004268	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006196	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1	Host-Associated	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300009821	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_20_30	Environmental	Open in IMG/M
3300009822	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_30_40	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300018056	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019254	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300025314	Soil microbial communities from Rifle, Colorado, USA - sediment 19ft 2	Environmental	Open in IMG/M
3300025560	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqB_D2 (SPAdes)	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026334	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)	Environmental	Open in IMG/M
3300026497	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-08-B	Environmental	Open in IMG/M
3300026532	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)	Environmental	Open in IMG/M
3300026540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)	Environmental	Open in IMG/M
3300027169	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_10_20 (SPAdes)	Environmental	Open in IMG/M
3300027324	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_50_60 (SPAdes)	Environmental	Open in IMG/M
3300027643	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027910	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes)	Environmental	Open in IMG/M
3300027961	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_30_40 (SPAdes)	Environmental	Open in IMG/M
3300028673	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-69-B	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300030619	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT150D86 (Novaseq)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300032005	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1	Host-Associated	Open in IMG/M
3300032012	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300034659	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60R1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034666	Metatranscriptome of lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8R2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034671	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24R1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034673	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24R3 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1005677221	3300000364	Soil	MTRKRGWLSFMPVLLVVVALPCGASAADKSKVDGATKQVDRGAKQIGQGQVGPGFKEMFTGVGHTVV
INPhiseqgaiiFebDRAFT_1005725221	3300000364	Soil	MTRKRGWLSFMPVLLVAVALPYGASAADRSKVDGATKQVDRGAKQIGQGQVGPGFKEMFTGVGHTVV
INPhiseqgaiiFebDRAFT_1006942601	3300000364	Soil	MXPRRRWLPIIAPACLVVTALSWGTVGAADKTKVDQATEQVEQGAKRIXQGXVGPGFKAMFTGIGHTIVEG
C687J26615_100824311	3300002121	Soil	MTRKRRWFWITPVFLGVVALSGGAAGAADKSKVDEATKRVEKGAKQIGQGQV
Ga0066398_102091732	3300004268	Tropical Forest Soil	MKQTVRRLGIAFGLVAAAVLSCNTAIAADKTKVDQATRRVERGAK
Ga0066395_105439602	3300004633	Tropical Forest Soil	MTRTRLWTWMAPGFLAAVALSCGSAAAADKTKVDQATKRVERGAKQIGQGQVGLGFREMF
Ga0066395_107041042	3300004633	Tropical Forest Soil	MSLRRRWLPIIAPACLVVTALSWGTVGAADKTKVDQATKRVDQGAKQIGQGKVGPGFKEMFTGIGHT
Ga0066676_106826351	3300005186	Soil	MIRRRGWIWIAPGFLAALALSSGIAGAADKTKVDHATKRVERGAKQIGQGKVGPGFKEMFTGIGH
Ga0066388_1018563272	3300005332	Tropical Forest Soil	MTGRLRRAWIAPGILAALALSCGTAGAADKTKVNQATRRVERGAKQIGQGQVGPGFREMFAGVGHTIAEGAKFAGENIREFFARKK*
Ga0066388_1040140112	3300005332	Tropical Forest Soil	MTRRPRWSSISLACLAVVALSLGPAGAADKTKVDEATKRVEQGAKQIGQGQVGSGF
Ga0070692_114227901	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	MTQRLRGLWITSALLAVVALPCGPAGAADKTKVDQATQRVEQGAKQIG
Ga0070705_1000408532	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MTQRLRGLWITSAFLAVVALSCGPAGAADKTQVDQATQRVEQGAKQIGRGQVGPGFKEMFTGIGRTIVEGAKLSGESIKEFFAGKK*
Ga0070700_1004897471	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MTRRLRWVWVVPGLLAALTLSCGTAGAADKSKVDQATKRVERGAKQIGRGQIGPGFKEMFTGIGHTIVEGARFSGENIKEFLRGKK*
Ga0070694_1001358835	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MTRRTRGWLVAPVFVLVAALSCGTAGAADKTKVDAATQQVQQGARQIGQGSVGT
Ga0066689_105939011	3300005447	Soil	MRRTLRWLWIAPGFLATLTLSCGTAAAADKTKVDQATKRVERGAKQIGQGQVGPGFKEMF
Ga0066682_102945921	3300005450	Soil	MIRRLRWLGIGPVVLAAMTLFSGTSDAADKTKVDQATKRVERGAKQIGQGQVGPGFKEM
Ga0070707_1001876973	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MIRRLRWVGIAPVVLAAVTLFSGTSDAADKTKVDQATKRVERGAKQIGQGQVG
Ga0070698_1010594801	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MTRRLCWVWIAPGFLAALALSCGTVSAADKTKVDQATKRVEGGAKQIGQGQVGPGFKEMF
Ga0070695_1002771372	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	RRLRWVWVVPGLLAALTLSCGTAGAADKSKVDQATKRVERGAKQIGRGQIGPGFKEMFTGIGHTIVEGARFSGENIKEFLRGKK*
Ga0066704_100644723	3300005557	Soil	MTRTLRWLWIAPGFLAALALSCGTAAAADKTKVDQATKRVERGAKQIGQGQVGPGFKEMFTGVGHT
Ga0066700_102444871	3300005559	Soil	MIRRLGWVGIAPAVLAAVTLFSGTGDAADKTKVDQATKRVERGAKQVGQGQVGPGFKEM
Ga0066700_108672941	3300005559	Soil	MTRTLRWLWIAPGFLAALALSCGTAAAADKTKVDQATKRVERGAKQIGQGQVGPGFKEMF
Ga0068858_1004797611	3300005842	Switchgrass Rhizosphere	MRRTIRWVWIAPGLLAALTFSCGTAVAADKTKVDQATKRVERGAKQIG
Ga0068860_1011399962	3300005843	Switchgrass Rhizosphere	MTRRLRWVWVVPGLLAALTLSCGTAGAADKSKVDQATKRVERGAKQIGRGQIGPGFKEMFTGIGHTIVEGARFSGENIKE
Ga0070715_109154701	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MRRTIRWMWIAPGLLAALTFSCGTAVAADKTKVDQATKRVERGAKQIGQGQVGLGFREMFAGVGHTV
Ga0075422_100718523	3300006196	Populus Rhizosphere	MTAKHRRFLITPVFVAVVAMYSGAAGAADKSKVDGATSQVEKGAKQIGQSQ
Ga0066665_100135081	3300006796	Soil	MTRRLRWLWIAPGFLAALALSCGTASAVDKTKVDQATKRVARGAKHIGQG*
Ga0066659_104245392	3300006797	Soil	MRRTLRWLWIAPGFLATLTLSCGTAAAADKTKVDQATKRVERGAQQIGQGQVGPGFKEMFTGVGHTIVEG
Ga0079220_101257461	3300006806	Agricultural Soil	MMRRLRWLSIAPAVLLVVALACGTVEAADKTKVDEATKQVQQGAKQIGQGDVGPGFKAMFVGIGNTIV
Ga0075433_100817591	3300006852	Populus Rhizosphere	MTRRPRLLWFAPACFFLLALSCGTVAAADKTEVDRATKRVEQGAKQIGQGKVGPGFKEMF
Ga0075433_103737512	3300006852	Populus Rhizosphere	MTERLRGLWVAPAVLLVVGLSVGPVAAADKTKVDQATKQVQDGAKQIGQGAAGSGFKDLF
Ga0075425_1002614631	3300006854	Populus Rhizosphere	MTRRPRLLWFAPACFFLLALSCGTVAAADKTEVDRATKRVEQGA
Ga0075425_1022925632	3300006854	Populus Rhizosphere	MTRRLRWVWIAPALLAASTLSCGTAGAADKSKVDQATKRVERGAKRIG
Ga0075435_1010117861	3300007076	Populus Rhizosphere	MTRRLRWLWIAPGFLAAVALSCGTAAAADKTKVDQATKRVERGAKQI
Ga0066710_1001736013	3300009012	Grasslands Soil	MIRRRGWIWIAPGFLAALALSSGIAGPPDKTKVDHATRRVERGAKQIGQGKVGPGFKEMFTGIG
Ga0066710_1009956222	3300009012	Grasslands Soil	MTGRLRWVWIAPGFLAALALSCGTAAAADKTKVDQATKRVERGAKQIGQGQVGPGFK
Ga0066710_1027917971	3300009012	Grasslands Soil	MSLRRRWLPIIAPACLVVTALSWGTVGAADKAKVDQATEQVEQGAKRIGQGKVGPGFKEMFTGIGRRIV
Ga0066710_1035529022	3300009012	Grasslands Soil	MRRRLRWVWLTSGFLAALALSSGTVGAADKTKVDQATKRVERGAKQIGQGQVGPGFKEMF
Ga0099829_102243121	3300009038	Vadose Zone Soil	MIRRLRWLGLAPVFLAAVTLSSGTTDAADKTKVDQATKRVEQAAKQIGQGQVGPGFKEMFTGIGHTVVEG
Ga0099829_111036481	3300009038	Vadose Zone Soil	MTRRLRWVWIAPGFLAALALSCGTAGAADKTKVDQATKRVEQGAKQIGQGQVGPGFKEMFTGVGYTIV
Ga0099829_115056571	3300009038	Vadose Zone Soil	VWIAPGFLAALALSCGAAGAADKTKVDQATKRVERGAKQIGQGQVGPGFKEMFTG
Ga0099830_112848831	3300009088	Vadose Zone Soil	MWIAPGFLAALALSCGTAGAADKTKVDQATKRVERGAKQIGQGQ
Ga0099828_101091936	3300009089	Vadose Zone Soil	VWIAPGFFAALALSCGTASAADKTKVDQATKRVERGAKQIGQGQVGPGFKEMFTGVGHTFVEGA
Ga0099828_113095731	3300009089	Vadose Zone Soil	VWIAPGFLAALALSCGTAGAADKTKVDQATKRVERGAKQIGQGQVGPGFKEMFTGI
Ga0099828_119154991	3300009089	Vadose Zone Soil	MTRRLCWVWIAPGFLAALALSCGTAGAADQTKVDQATKRVERGAKQIGQGQVGPGFKEM
Ga0105247_105702812	3300009101	Switchgrass Rhizosphere	MWITPGLLAALTFSCGTAVAADRTKVDQATKRVERGAKQIGQGQVGLGFREMFAGVGHTV
Ga0126374_103813662	3300009792	Tropical Forest Soil	MAPGFLAALALSSGTADAADKTKVDQATKRVERGAKQIGQGQVGSGFKEMFTGIGH
Ga0105064_10274911	3300009821	Groundwater Sand	MTRKLRWLWIAPAFLAVVALSFGAAGAADKSKVDQATSRVKQGAKQIGAGEAGPGFKEM
Ga0105066_10463921	3300009822	Groundwater Sand	MALSWSTVGAADKTKVDQATKRVEQGAKQIGQGKVGPGFKEMFTGIGHT
Ga0126380_100687693	3300010043	Tropical Forest Soil	MAPGFLAAVALSCGTAGAADKTKVDQATQRVERGAKQIGQGQVGLGFREMFAGIGHTVVE
Ga0126380_116518202	3300010043	Tropical Forest Soil	MKQTLRRLGIAFGLVAAAVLSCNSAIAADKTKVDQATRRVERGAKQ
Ga0126380_117390312	3300010043	Tropical Forest Soil	MRHRHWFWITPVFFTLALFCSAADAADKTKVDDATRRVEKGAKQIGQGQ
Ga0126384_113563261	3300010046	Tropical Forest Soil	MEHDRQRRCAVTAKHRWLVITPVFIVVVMMSWSSDAADKSKVDHATRQVDRGAKQIGQGQVGPGFKE
Ga0126384_122031881	3300010046	Tropical Forest Soil	MRHRHWFWITPVFLTLTLFCSAADAADKTKVDGATKRVEKGAKQIGQGQVG
Ga0126382_104427813	3300010047	Tropical Forest Soil	MTRRPRWAWIAPGFLAALALSCGTVAAGDKTKVDQATKRVERGAKQIGQGQVGFGFREMFAG
Ga0126373_128487392	3300010048	Tropical Forest Soil	MRQKHLWILMAAGFLAALTLSCGTAGAADKTKVDQATKRVERGAKQIGQGQVGLGFREMFAGIGHTVV
Ga0134088_102024992	3300010304	Grasslands Soil	MTQRLRWIWIAPGFLAALALSGGTASAADKTKVDQATKRVERGAKQIGQGQVG
Ga0126376_108036402	3300010359	Tropical Forest Soil	MAPGFLAAVALSCGSAAAADKTKVDQATKRVERGAKQIGQGQVGLGFREMFAGIGHTVVE
Ga0126376_126670822	3300010359	Tropical Forest Soil	MWMAPGFLAALALSCGTADAADKTKVDQATKRVERGAKQIGQGQVGLGFREMFAG
Ga0126376_127193001	3300010359	Tropical Forest Soil	MAPGFLAAVALSCGTAAAADKTKVDQATKRVERGAKQIGQGQVGLGFR
Ga0126372_112425302	3300010360	Tropical Forest Soil	VWIAPGFLAALALAYETAVAADKTKVDQATARVERGAKQIGQGQIGPGFKE
Ga0126372_116041522	3300010360	Tropical Forest Soil	MAPGFLAAVALSSGTAAAADKTKVDQATKRVERGAKQIGQGQVGLGFREMFAGIG
Ga0126378_121351372	3300010361	Tropical Forest Soil	MAPGFLAAVALSCGTAAAADKTKVDQATKRVERGAKQIGQGQVGLGFREMFAGIG
Ga0126377_108384022	3300010362	Tropical Forest Soil	MEVLMTKRRFIWIAPAVVVTLAVMCATAGAADKTKVDQATRRVEQGARQIGQGKLGSGFKEMFAGIGHTVV
Ga0126377_136122151	3300010362	Tropical Forest Soil	MMRKPHWLRITLVFLTVALFWGAADAADKGKVDRATNRVEKGAKQIGQGQVGPGFKEMFTGMGHTIVEGAKYSGENIKEFFAGKK*
Ga0126379_128300552	3300010366	Tropical Forest Soil	MAPGILAALALSCGTADAADKTKVDQATKRVERGAKQIGQGQVGLGFREMFAG
Ga0134124_100864001	3300010397	Terrestrial Soil	MSLRRRWLPIIAPACLVVTALSWGTVGAADKTNVGQATEQVEQGAKRIGQGKVGPGFKEMFTGVGH
Ga0134124_114095482	3300010397	Terrestrial Soil	MTRRFRWVWIALGFLAALTLSCGAATAADKTKVDQATKRVQRGAKQIGRGQVGPGFKEMFAGIGHTIV
Ga0134127_136064202	3300010399	Terrestrial Soil	MTRRLRWVWVVPGLLAALTLSCGTAGAADTSKVDQATKRVERGAKQIGRGQI
Ga0137392_106981792	3300011269	Vadose Zone Soil	MWIAPGFLAALALSGGTAGAADKTKVDQATKRVEQGAKQIGQGQVGPGFK
Ga0137393_110752211	3300011271	Vadose Zone Soil	MTRTLRWLWIAPGFLATLALSCGTAGAADKTKVDQATKRVEQGAKQIGQGQVG
Ga0137389_109110711	3300012096	Vadose Zone Soil	MWIAPGFLAALALSGGTAGAADKTKVDQATKRVEQGAKQIGQGQVGPGFKEM
Ga0137362_104098331	3300012205	Vadose Zone Soil	MTWRRRWFWIVPTFLAVMALSYGAAGAADKSKVDGATNRVKQGAKQIGQGQVG
Ga0137379_105064061	3300012209	Vadose Zone Soil	MTWRHRWFWIVPAFLAVMALSCGAAGAADKSKVDLATNRAKQGAKQIGQGQVGTGFKEMFTGVG
Ga0137378_101413731	3300012210	Vadose Zone Soil	LWIAPGFLAALALSCGPVSAADKTKVDQATKRVEGGAKQIGQGQVGPG
Ga0137378_118080312	3300012210	Vadose Zone Soil	MTGRLRWLWIAPGFLAALALSCGTAAAADKTKVDQATKRVERGAKQIGQGQVGPGFK
Ga0137370_109384141	3300012285	Vadose Zone Soil	LWIAPGFLAALALSCGPVSAADKTKVDQATKRVEGGAKQIGQGQVGPGFKEMFTGI
Ga0137369_103173232	3300012355	Vadose Zone Soil	MTRRLRGWWIIPAFLMVVALSSDVAGAADKTKVDRATSRVEQGAKQIGQGELGPGFKE
Ga0137384_100591415	3300012357	Vadose Zone Soil	MWIAPGFLAALALSCGTAGAADKTKVDQATKRVEQGAKQIGQGQVGPGFKEMFTG
Ga0137361_104600102	3300012362	Vadose Zone Soil	MIRRLRWVGIAPVVLAAVTLFSGTSDAADKTKVDQATKRVERGAKQVGQGQVGPG
Ga0137390_104619383	3300012363	Vadose Zone Soil	MWIAPGFLAALALSGGTAGAADKTKVDQATKRVEQGAKQIGQGQVGPGF
Ga0137358_105056282	3300012582	Vadose Zone Soil	MTQRSRRWCIVSAYVVLVALSHGAASAADRTKVDHATQRVEQGAKQIGRGDLGPGFKEMFTDIGHTIVERAKFSGNTVGEFFKRTFGG*
Ga0137397_101001621	3300012685	Vadose Zone Soil	MIPAFLMVVALSSGVAGAADKTKVDRATSRVEQGAKQIGQGELGPGFKEFFVGIGYTIVE
Ga0137396_109642491	3300012918	Vadose Zone Soil	MIRRLRWLLAPVFLAAVTLSSGTTDAADKTKVDQATKRVEQGAKQI
Ga0126369_135659791	3300012971	Tropical Forest Soil	MAPGFLAALALSCGTADAADKTKVDQATKRVERGAKQIGQGQVG
Ga0157379_111576572	3300014968	Switchgrass Rhizosphere	VWVVPGLLAALTLSCGTAGAADKSKVDQATKRVERGAKQIGRGQIGPGFKEMFT
Ga0182036_101737351	3300016270	Soil	MTRRPRWSSISLACLAVVALSLGPAGAADKTKVDEATKRVEQGAKQISQGQVGSGFKEMFAGI
Ga0182041_121412651	3300016294	Soil	MTRRPRWSSISLACLAVVALSLGSAGAADKTKVDEATKRVEQGAKQIGQGQVGSGFKEMFAGIGHT
Ga0134083_104072332	3300017659	Grasslands Soil	MVRRSRWVSIPPACLVIVALSCGAAGAADQTKVNQATKRVEQGAKQIGQGEVGPGFKEMFTGIGHTIVEGPKFSGETIGEFFKKTFAK
Ga0184623_102301911	3300018056	Groundwater Sediment	MTRKRRWFWITSAFLAVMALSWGAAGAADKRKVDGATKRVEKGAKQIGQGQVGPGFKEMFTGIGHTIVEGAKLSGENIKEFFTGKK
Ga0184609_104305292	3300018076	Groundwater Sediment	MTRRLRRRWVIPAFLMVVALSGGVAGAADKTKVDRATDRVEQGAKQIGQGELGP
Ga0066662_115427391	3300018468	Grasslands Soil	MTGRLRWVWIAPGFLAALALSCGTAAAADKTKVDQATKRVERGAKQIGQGQVGPGFKEMF
Ga0066669_121043161	3300018482	Grasslands Soil	MRRRLRWVWLTPGFLAALALSSGTVGAADKTKVDQATKRVERGAKQIGQGQVGPGFKEMFAGIGHT
Ga0184641_11458352	3300019254	Groundwater Sediment	MTQRLRGLWITSAFLAVAALSCGPAGAADKTRVDQATQRVEQGAKQIGRGQVGSGFKEMFTGIGHTIVEGAKLSGESIKEFFAGKK
Ga0209323_101591041	3300025314	Soil	MTRKRRWFWITPVFLGVVALSGGAAGAADKSKVDEATKRVEKGAKQIGQGQ
Ga0210108_10248561	3300025560	Natural And Restored Wetlands	MTRRLRWVEMAPVFLAAVTLSFGMADAADRTKVDEATKRVERGAKQIGQGEVGLGFREMFTGIGYTIV
Ga0207685_102120922	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	MRQTIRWMWIAPGLLAALTFSCGTAVAADKTKVDQATKRVERGAKQIGQGQVGLGFREMFAGVGHTV
Ga0207646_100506761	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MTWRRRWFWIVPAFLAVMALSCGAAGAADKSKVDGATNRVKQGAKQIGQGQVGTGVKEMFTGVGH
Ga0207646_118957652	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MTRRLRGRWIIPAVLMVVALSGGVAGAADKSKVDQATGRVERGAKQIGQGELGPGF
Ga0207708_104581132	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MTRRLRWVWVVPGLLAALTLSCGTAGAADKSKVDQATKRVERGAKQIGRGQIGPGFKEMFTGIGHTIVEGARFSGENIKEFLRGKK
Ga0209377_12868502	3300026334	Soil	MTGRLRWVWIAPGFLAALALSCGTAAAADKTKVDQATKRVERGAKQIGQGQVGPGFKEMFTGVGHTVVEG
Ga0257164_10919781	3300026497	Soil	MTWKRRWFWIIPAFLAVMALSCGAAGAADKSKVDGATNRVKQGAKQIGQGQVGPGFKELFTGIGHTVV
Ga0209160_11138363	3300026532	Soil	MSLRRRWLPIIAPACLVVTALSWGTVGAADKAKVDQATEQVEQGAKRIGQGKVGPGFKEMFTGNTMAEFFKKTFSG
Ga0209376_14152511	3300026540	Soil	MIRSSRRLWIPIACLVVLALSSGAASAANKTKVDQATRRVEQGAKQIGQGKVGPGFKEMFTG
Ga0209897_10093733	3300027169	Groundwater Sand	MTQRSRWSWIAPACLVVMALSWSTVGAADKTKVDQATKRVEQGAKQIGQGKVGPGFK
Ga0209845_10427952	3300027324	Groundwater Sand	MTQRSRWSWIAPACLVVMALSWSTVGAADKTKVDQATKRVEQGAKQIGQGKVGPGFKEM
Ga0209076_10950341	3300027643	Vadose Zone Soil	MTRTLRWVWIAPGFLAALALSCGTAGAADKTKVDQATKRVERGAKQIGQGQV
Ga0209180_100300601	3300027846	Vadose Zone Soil	MTRRLRRRWVIPAFLMVVALSGGVAGAADKTKVDRATDRVEQGAKQIGQGELGPGFKEFFIGIG
Ga0209180_100377071	3300027846	Vadose Zone Soil	MTRRLRWVWIAPGFLAALALSCGTADAADKTKVDQATKRVERGAKQIGQGQVGPGFK
Ga0209180_104490933	3300027846	Vadose Zone Soil	MIRRLRWLGLAPVFLAAVTLSSGTTDAADKTKVDQATKRVEQGAKQIGQGQVGPG
Ga0209180_106269131	3300027846	Vadose Zone Soil	MTRTLRWLWIAPGFLATLALSCGTAGAADKTKVDQATKRVEQGAKQIGQGQVGPGFKEMFTGIGHTVV
Ga0209701_102230902	3300027862	Vadose Zone Soil	MIRRLRWLWIAPGFLAALALSCGTAGAADKTKVDQATKRVERGAKQI
Ga0209701_106193141	3300027862	Vadose Zone Soil	MTRRLRWMWIAPGFLAALALSCGTAGAADKTKVDQATKRVERGAKQIGQGQVGPG
Ga0209701_106594911	3300027862	Vadose Zone Soil	MTRKLHWLWIAPGFLAALALSCGTASAADKTKVDQATKRVERGAKQIGQGQVGPGFKEMF
Ga0209283_101288601	3300027875	Vadose Zone Soil	MTRRLRWMWIAPGFLAALALSCGTAGAADKTKVDQATKRVERGAKQIGQGQVG
Ga0209283_101402881	3300027875	Vadose Zone Soil	MTRRLCWVWIAPGFLAALALSCGTAGAADQTKVDQATKRVERGAKQIGQGQVGPGFK
Ga0209283_105472131	3300027875	Vadose Zone Soil	MTRRLRWMWIAPGFLAALALSGGTAGAADKTKVDQATKRVEQGAKQIGQGQVGPGFKEMFTGVGHTIVEGA
Ga0209583_100099031	3300027910	Watersheds	MTRRLGWLGVAPAFLVVVGLGAGTVVAADKTKVDEATKQVAQGAKQIGQGDAGSGFKDLFKGIG
Ga0209853_10692572	3300027961	Groundwater Sand	MTQRSRWSWIAPACLVVMALSWSTVGAADKTKVDQATKRVEQGAKQIGQGKVGPGF
Ga0257175_10613651	3300028673	Soil	MTRRLRWVWIAPGFLAALALSCDTAGAADKTKVDQATKRVEQGAKQIGQGQVGPGFKEMFTGIGH
Ga0307312_103870311	3300028828	Soil	MTRRLRGRWIIPAFLMVVALSSSVAGAADKTKVDRATSRVEQGAKQIGQGELGPGFKE
Ga0268386_105998561	3300030619	Soil	MARRLRSLWIIPAFLMVVALSAGVAGAADKSKVDRATSRVEQGAKQIGQGQLGPGFKEFFVG
Ga0307469_102955102	3300031720	Hardwood Forest Soil	VTAKHRWLVITPVFIGVMAMSWGAADAADKSKVDRATRQVDRGAKQIGQGQVGP
Ga0307469_106578272	3300031720	Hardwood Forest Soil	MSLTRSRFWAIPAFLAIVALSSGTADAADKSKVDRATRRVENGAKQIGQGQVGPGFKEMFTGVGHTI
Ga0307469_114028231	3300031720	Hardwood Forest Soil	MTRKLRWAWIAPGILATLALFCGAAGAADKTKVDHATKRVEQGAKQIGQGQVGPGFKEMFTGVGHTIVEG
Ga0318557_100259834	3300031795	Soil	MTRTRLWTWMAPGFLAAVALSCGSAAAADKTKVDQATKRVERGAKQIGQGQVGLGFREMFAGIGHTVVE
Ga0307473_100417841	3300031820	Hardwood Forest Soil	MPRRSRWSWIPPACLVVVALSWGTVGAADKTKVDQATKQVDQGAKQIGQGKVGP
Ga0307473_106774971	3300031820	Hardwood Forest Soil	MSLRRRWLPIIAPACLVVTALSWGTVGAADKTKVDQATKQVDQGAKQIGQGKVGPGFK
Ga0310913_106830191	3300031945	Soil	MTRRPRWSSISLACLAVVALSLGSAGAADKTKVDEATKRVEQGAKQISQGQVGSGFKEMFAGI
Ga0310910_109541902	3300031946	Soil	MTRTRLWTWMAPGFLAAVALSCGSAAAADKTKVDQATKRVERGAKQIGQGQVGLGFREMFAGIGHTV
Ga0307411_107234831	3300032005	Rhizosphere	MMRKRHWFWITPVFLTVALSWGAADAADKSKVDGATQRVERGAQQIGQGQIGPGFKEMFA
Ga0310902_101887311	3300032012	Soil	MTAKHRRFLITPVFVAVVAMYSGAAGAADKSKVDGATSQVEKGAKQIGQ
Ga0318570_103673801	3300032054	Soil	MTRTRLWTWMAPGFLAAVALSCGSAAAADKTKVDQATKRVERGAKQIGQGQVGLGFR
Ga0307472_1006625551	3300032205	Hardwood Forest Soil	MRRTIRWMWIAPGLFAALAFSCGTAAAADKTKVDQATKRVERGAKQIGQGQVGLGFRE
Ga0307472_1015390181	3300032205	Hardwood Forest Soil	MIRRLRWVGIAPVVLAAVTLFSGTSDAADKTKVDQATKRVERGAKQIGQGQVGPGFKEMFTGIGHTVVE
Ga0335084_116122472	3300033004	Soil	MTGRRRWLYVAAGLLVGVALTGGAATAADKTKVDEATRRVEQGAKQIGQGQLGEGFKELF
Ga0314780_084692_497_697	3300034659	Soil	MTAKHRRFLITPVFVAVVAMYSGAAGAADKSKVDGATSQVEKGAKQIGQSQVGPGFKEMFTGVGRTI
Ga0314788_120156_471_611	3300034666	Soil	MTAKHRRFLITPVFVAVVAMYSGAAGAADKSKVDGATSQVEKGAKQI
Ga0314796_068848_507_710	3300034671	Soil	MTAKHRRFLITPVFVAVVAMYSGAAGAADKSKVDGATSQVEKGAKQIGQSQVGPGFKEMFTGVGRTIV
Ga0314798_073982_497_679	3300034673	Soil	MTAKHRRFLITPVFVAVVAMYSGAAGAADKSKVDGATSQVEKGAKQIGQSQVGPGFKEMF

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F054367

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences