Metagenome / Metatranscriptome Family F054319

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F054319
Family Type	Metagenome / Metatranscriptome
Number of Sequences	140
Average Sequence Length	89 residues
Representative Sequence	MGGAFFRAFVPAAKALSGAYEEGIAGMLTIIKASLLGSALMLLESCTGYLTSYQTPCVEGHVCECVQYTTVYRSWLDCRDYGRVKSRAY
Number of Associated Samples	110
Number of Associated Scaffolds	140

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	16.06 %
% of genes near scaffold ends (potentially truncated)	44.29 %
% of genes from short scaffolds (< 2000 bps)	90.00 %
Associated GOLD sequencing projects	100
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (50.714 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (25.000 % of family members)
Environment Ontology (ENVO)	Unclassified (36.429 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (48.571 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 70.79% β-sheet: 1.12% Coil/Unstructured: 28.09%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 140 Family Scaffolds
PF00589	Phage_integrase	3.57
PF00496	SBP_bac_5	2.14
PF04392	ABC_sub_bind	2.14
PF00550	PP-binding	0.71
PF13586	DDE_Tnp_1_2	0.71
PF07583	PSCyt2	0.71
PF00126	HTH_1	0.71
PF13358	DDE_3	0.71
PF13683	rve_3	0.71

COG ID	Name	Functional Category	% Frequency in 140 Family Scaffolds
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	2.14

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	50.71 %
Unclassified	root	N/A	49.29 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	50.71 %
Unclassified	root	N/A	49.29 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	50.71 %
Unclassified	root	N/A	49.29 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.29 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	37.14 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	3.57 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.29 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	35.00 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	2.86 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2.14 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.29 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	17.86 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5.00 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.86 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2.14 %
unclassified Terriglobia	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.29 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	16.43 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.86 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	2.14 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1.43 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.43 %
Acidobacteriia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.29 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	16.43 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.86 %
Undibacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Undibacterium	2.14 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1.43 %
unclassified Bradyrhizobiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae	0.71 %
Acidobacteriia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.29 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	16.43 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.86 %
unclassified Undibacterium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Undibacterium → unclassified Undibacterium	2.14 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1.43 %
Bradyrhizobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	0.71 %
Acidobacteriia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.29 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	16.43 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.86 %
Undibacterium sp. 14-3-2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Undibacterium → unclassified Undibacterium → Undibacterium sp. 14-3-2	2.14 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1.43 %
Bradyrhizobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	0.71 %
Acidobacteriia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	0.71 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000597\|AF_2010_repII_A1DRAFT_10053464	Not Available	1045	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10062056	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	956	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10127396	Not Available	620	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10020693	Not Available	1575	Open in IMG/M
3300002911\|JGI25390J43892_10040163	Not Available	1120	Open in IMG/M
3300005167\|Ga0066672_11006979	Not Available	509	Open in IMG/M
3300005176\|Ga0066679_10455636	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	837	Open in IMG/M
3300005177\|Ga0066690_10449201	Not Available	873	Open in IMG/M
3300005332\|Ga0066388_101489990	Not Available	1182	Open in IMG/M
3300005332\|Ga0066388_102001557	Not Available	1038	Open in IMG/M
3300005332\|Ga0066388_108170692	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	522	Open in IMG/M
3300005356\|Ga0070674_101849670	All Organisms → cellular organisms → Bacteria	548	Open in IMG/M
3300005363\|Ga0008090_10062968	All Organisms → cellular organisms → Bacteria	913	Open in IMG/M
3300005363\|Ga0008090_15837589	Not Available	604	Open in IMG/M
3300005444\|Ga0070694_100699647	Not Available	824	Open in IMG/M
3300005447\|Ga0066689_10490948	Not Available	774	Open in IMG/M
3300005467\|Ga0070706_100065112	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Undibacterium → unclassified Undibacterium → Undibacterium sp. 14-3-2	3370	Open in IMG/M
3300005471\|Ga0070698_100113364	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Undibacterium → unclassified Undibacterium → Undibacterium sp. 14-3-2	2676	Open in IMG/M
3300005471\|Ga0070698_100997473	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	785	Open in IMG/M
3300005536\|Ga0070697_100067653	All Organisms → cellular organisms → Bacteria	2923	Open in IMG/M
3300005549\|Ga0070704_100598617	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	969	Open in IMG/M
3300005554\|Ga0066661_10260393	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1072	Open in IMG/M
3300005556\|Ga0066707_10814564	Not Available	576	Open in IMG/M
3300005559\|Ga0066700_10052345	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	2516	Open in IMG/M
3300005713\|Ga0066905_101067668	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	715	Open in IMG/M
3300005764\|Ga0066903_101084528	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1474	Open in IMG/M
3300005764\|Ga0066903_101478455	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1281	Open in IMG/M
3300005764\|Ga0066903_105039799	Not Available	700	Open in IMG/M
3300005764\|Ga0066903_107678857	Not Available	555	Open in IMG/M
3300005764\|Ga0066903_108667463	Not Available	517	Open in IMG/M
3300005937\|Ga0081455_10057829	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3285	Open in IMG/M
3300006172\|Ga0075018_10259904	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	843	Open in IMG/M
3300006172\|Ga0075018_10590100	Not Available	590	Open in IMG/M
3300006847\|Ga0075431_101968047	Not Available	540	Open in IMG/M
3300007076\|Ga0075435_100909076	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	768	Open in IMG/M
3300009147\|Ga0114129_11862524	Not Available	730	Open in IMG/M
3300009792\|Ga0126374_10180548	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1314	Open in IMG/M
3300009792\|Ga0126374_10731878	Not Available	748	Open in IMG/M
3300010046\|Ga0126384_10288532	Not Available	1344	Open in IMG/M
3300010046\|Ga0126384_10786136	Not Available	851	Open in IMG/M
3300010046\|Ga0126384_11409745	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	650	Open in IMG/M
3300010047\|Ga0126382_10296790	All Organisms → cellular organisms → Bacteria	1211	Open in IMG/M
3300010303\|Ga0134082_10407313	Not Available	583	Open in IMG/M
3300010329\|Ga0134111_10133961	Not Available	972	Open in IMG/M
3300010360\|Ga0126372_11485166	Not Available	713	Open in IMG/M
3300010361\|Ga0126378_11726510	Not Available	711	Open in IMG/M
3300010361\|Ga0126378_12619125	Not Available	576	Open in IMG/M
3300010362\|Ga0126377_11996517	Not Available	656	Open in IMG/M
3300010366\|Ga0126379_10657132	Not Available	1139	Open in IMG/M
3300010398\|Ga0126383_10790657	Not Available	1031	Open in IMG/M
3300010398\|Ga0126383_10950706	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	946	Open in IMG/M
3300011269\|Ga0137392_10318493	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1287	Open in IMG/M
3300012199\|Ga0137383_10184605	Not Available	1529	Open in IMG/M
3300012199\|Ga0137383_10420012	Not Available	980	Open in IMG/M
3300012204\|Ga0137374_10189435	All Organisms → cellular organisms → Bacteria	1785	Open in IMG/M
3300012205\|Ga0137362_10435865	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1135	Open in IMG/M
3300012206\|Ga0137380_10237617	All Organisms → cellular organisms → Bacteria	1645	Open in IMG/M
3300012207\|Ga0137381_10398795	Not Available	1200	Open in IMG/M
3300012208\|Ga0137376_11343088	Not Available	605	Open in IMG/M
3300012349\|Ga0137387_11106118	Not Available	564	Open in IMG/M
3300012351\|Ga0137386_10554347	Not Available	827	Open in IMG/M
3300012354\|Ga0137366_11071581	Not Available	556	Open in IMG/M
3300012356\|Ga0137371_10361097	Not Available	1128	Open in IMG/M
3300012361\|Ga0137360_10354916	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1228	Open in IMG/M
3300012361\|Ga0137360_10516973	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	1017	Open in IMG/M
3300012362\|Ga0137361_10455274	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1175	Open in IMG/M
3300012362\|Ga0137361_10619488	Not Available	991	Open in IMG/M
3300012362\|Ga0137361_11673947	Not Available	556	Open in IMG/M
3300012917\|Ga0137395_11160046	Not Available	543	Open in IMG/M
3300012929\|Ga0137404_11998335	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	541	Open in IMG/M
3300012948\|Ga0126375_11413418	Not Available	590	Open in IMG/M
3300012985\|Ga0164308_11935225	Not Available	550	Open in IMG/M
3300015264\|Ga0137403_10617759	Not Available	948	Open in IMG/M
3300016357\|Ga0182032_11395514	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	606	Open in IMG/M
3300016371\|Ga0182034_10054977	All Organisms → cellular organisms → Bacteria	2651	Open in IMG/M
3300016422\|Ga0182039_10550133	Not Available	1003	Open in IMG/M
3300016422\|Ga0182039_11781547	Not Available	564	Open in IMG/M
3300016445\|Ga0182038_11601395	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	586	Open in IMG/M
3300016445\|Ga0182038_12011208	Not Available	523	Open in IMG/M
3300017659\|Ga0134083_10318966	Not Available	663	Open in IMG/M
3300018074\|Ga0184640_10290264	Not Available	743	Open in IMG/M
3300018431\|Ga0066655_10689879	Not Available	691	Open in IMG/M
3300018468\|Ga0066662_12393875	Not Available	555	Open in IMG/M
3300021088\|Ga0210404_10859084	All Organisms → cellular organisms → Bacteria	519	Open in IMG/M
3300021361\|Ga0213872_10065294	Not Available	1643	Open in IMG/M
3300021560\|Ga0126371_12318519	Not Available	649	Open in IMG/M
3300021560\|Ga0126371_12449932	Not Available	631	Open in IMG/M
3300025910\|Ga0207684_10002924	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	16927	Open in IMG/M
3300025922\|Ga0207646_10869411	Not Available	801	Open in IMG/M
3300026310\|Ga0209239_1030416	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Undibacterium → unclassified Undibacterium → Undibacterium sp. 14-3-2	2572	Open in IMG/M
3300026317\|Ga0209154_1068073	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1553	Open in IMG/M
3300027654\|Ga0209799_1041236	All Organisms → cellular organisms → Bacteria	1029	Open in IMG/M
3300027748\|Ga0209689_1087960	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1630	Open in IMG/M
3300027903\|Ga0209488_10517717	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	873	Open in IMG/M
3300031543\|Ga0318516_10080201	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1821	Open in IMG/M
3300031545\|Ga0318541_10489162	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	688	Open in IMG/M
3300031573\|Ga0310915_10118508	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1805	Open in IMG/M
3300031573\|Ga0310915_10248615	All Organisms → cellular organisms → Bacteria	1251	Open in IMG/M
3300031680\|Ga0318574_10122625	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1459	Open in IMG/M
3300031680\|Ga0318574_10744208	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	574	Open in IMG/M
3300031682\|Ga0318560_10125707	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1344	Open in IMG/M
3300031719\|Ga0306917_10210378	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1476	Open in IMG/M
3300031744\|Ga0306918_10835536	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	718	Open in IMG/M
3300031748\|Ga0318492_10435128	Not Available	692	Open in IMG/M
3300031777\|Ga0318543_10429492	Not Available	592	Open in IMG/M
3300031780\|Ga0318508_1221798	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	542	Open in IMG/M
3300031792\|Ga0318529_10008070	All Organisms → cellular organisms → Bacteria	3809	Open in IMG/M
3300031793\|Ga0318548_10560662	Not Available	556	Open in IMG/M
3300031794\|Ga0318503_10039371	All Organisms → cellular organisms → Bacteria	1414	Open in IMG/M
3300031796\|Ga0318576_10477404	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	588	Open in IMG/M
3300031797\|Ga0318550_10326223	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	744	Open in IMG/M
3300031819\|Ga0318568_10401124	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	854	Open in IMG/M
3300031835\|Ga0318517_10058954	Not Available	1624	Open in IMG/M
3300031879\|Ga0306919_11521214	Not Available	503	Open in IMG/M
3300031880\|Ga0318544_10252230	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	683	Open in IMG/M
3300031890\|Ga0306925_10550105	All Organisms → cellular organisms → Bacteria	1224	Open in IMG/M
3300031896\|Ga0318551_10428952	Not Available	754	Open in IMG/M
3300031910\|Ga0306923_10290813	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1867	Open in IMG/M
3300031910\|Ga0306923_12467946	Not Available	513	Open in IMG/M
3300031941\|Ga0310912_10191944	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1559	Open in IMG/M
3300031941\|Ga0310912_11141154	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	594	Open in IMG/M
3300031947\|Ga0310909_10082292	All Organisms → cellular organisms → Bacteria	2556	Open in IMG/M
3300031947\|Ga0310909_10152296	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1902	Open in IMG/M
3300031947\|Ga0310909_10183835	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1731	Open in IMG/M
3300031954\|Ga0306926_11157849	Not Available	911	Open in IMG/M
3300031981\|Ga0318531_10060720	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1620	Open in IMG/M
3300032001\|Ga0306922_10251536	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1899	Open in IMG/M
3300032035\|Ga0310911_10307592	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	912	Open in IMG/M
3300032043\|Ga0318556_10467420	Not Available	660	Open in IMG/M
3300032052\|Ga0318506_10559255	Not Available	507	Open in IMG/M
3300032059\|Ga0318533_11291371	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	533	Open in IMG/M
3300032063\|Ga0318504_10111405	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1235	Open in IMG/M
3300032064\|Ga0318510_10085454	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1179	Open in IMG/M
3300032065\|Ga0318513_10422052	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	651	Open in IMG/M
3300032076\|Ga0306924_10980205	Not Available	929	Open in IMG/M
3300032076\|Ga0306924_12194306	Not Available	563	Open in IMG/M
3300032094\|Ga0318540_10022146	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2663	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.71%
Host-Associated	Host-Associated	4.29%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	93.57%
Plants	Host-Associated → Plants	4.29%
Aquatic	Environmental → Aquatic	2.14%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	93.57%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.57%
Sediment	Environmental → Aquatic → Sediment	2.14%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.71%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	80.71%
Loam	Environmental → Terrestrial → Soil → Loam	12.86%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.86%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.14%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.71%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.71%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	40.00%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	30.00%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	9.29%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.14%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.71%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.86%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.14%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	1.43%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.71%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.71%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	25.00%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	15.00%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	12.14%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	12.14%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	7.14%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	6.43%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.71%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.86%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.86%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.14%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.14%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.43%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	1.43%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.71%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.71%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.71%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.71%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300000793	Forest soil microbial communities from Amazon forest - 2010 replicate II A001	Environmental	Open in IMG/M
3300002911	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300018074	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021361	Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2	Host-Associated	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026310	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026317	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)	Environmental	Open in IMG/M
3300027654	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031780	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031794	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A1DRAFT_100534643	3300000597	Forest Soil	VIHLLWGMRGGXPSFVPSAKAPVGKEEGVAGMLTIIKASXLGSALMLLEGCTGYLTSYQTPCVEGHACECVRYTTVNRSWLDCRDYGRVKSRAY*
AF_2010_repII_A1DRAFT_100620562	3300000597	Forest Soil	MRIWVLGLSPLSGAYEEGIAGMLTIIKASLLGSALMLLESCSGYLSSYQTPCVEGHVCECVRYTTVNRSWLDCRDYGRVKSRAY*
AF_2010_repII_A1DRAFT_101273961	3300000597	Forest Soil	MDRRHPSSLWAWGHAFFRAFVSAAKALSGAYEEGIVGMLTIIKASLLGSALMLLESCTGYLTSYQTPCVEGHVCECVQYTTVYRSWLDCRDYGRVKSRAY*
AF_2010_repII_A001DRAFT_100206934	3300000793	Forest Soil	MPSFVPSAKAPVGKEEGVAGMLTIIKASLLGSALMLLEGCTGYLTSYQTPCVEGHACECVRYTTVNRSWLDCRDYGRVKSRAY*
JGI25390J43892_100401632	3300002911	Grasslands Soil	MFCGHGGAFFRAFVPAAKALSGAYEEGIAGMLTIIKASLLASALMLLESCTGYLTSYQTPCVEGHVCECVQYTTIYRSWLDCRDYGRVKSRAY*
Ga0066672_110069791	3300005167	Soil	MFCGHGGAFFRAFVPAAKALSGAYEEGIAGMLTIIKASLLGSALMLLESCTGYLTSYQTPCVEGHVCECVQYTTIYRSWLDCRDYGRAKSRAY*
Ga0066679_104556361	3300005176	Soil	MGDAFFRAFVPAAKALSGAYEEGIAGMLTIIKASLLGSALMLLESCTGYLTSYQTPCVEGHVCECVQYTTIHRSWLDCRDYGRVKSRAY*
Ga0066690_104492011	3300005177	Soil	MFCGHGGAFFRAFVPAAKALSGAYEEGIAGMLTIIKASLLGSALMLLESCTGYLTSYQTPCVEGHVCECVRYTTVNRSWLDCRDYGRVKSRAY*
Ga0066388_1014899902	3300005332	Tropical Forest Soil	VPAAKAPSGAYEEGIAGMLTIIKASLLASALMLLESCTGYLTSYQTPCVEGHVCECVRYTTVNRSWLDCRDYGRVKSRAY*
Ga0066388_1020015573	3300005332	Tropical Forest Soil	VPAAKAVSGAYEEGIAGMLIIIKASLLGSALMLLESCTGYLTSYQTPCIEGHVCECVQYTTIYRSWLDCRDYGRVKSRAY*
Ga0066388_1081706922	3300005332	Tropical Forest Soil	MFCGHGGAFFRAFAPAAKALSGAYEEGVAGMLTIIKASLLGSALMLLESCTGYLTSYQTPCVEGHVCECVRYTTVNRSWLDCRDYGR
Ga0070674_1018496701	3300005356	Miscanthus Rhizosphere	MADAFFHAFVPAAKALSGAYEEGIEGMLTIIKVSLLASALMLLESCTGYLTSYQTPCVEGHVCECVQYTTLNRSWLDCRVYGRVGSRLTRTYLKIA*
Ga0008090_100629682	3300005363	Tropical Rainforest Soil	VSAAKALSGAYEEGIAGMLTIIKASLLGSALVLLESCTGYLTSYQTPCVEGHVCECVQYTTINRSWLDCRDYGRVKPRAY*
Ga0008090_158375891	3300005363	Tropical Rainforest Soil	VSAAKALSGAYEEGIAGMLTIIKASLLGSALMLLESCTGYLTSYQTPCVEGHVCECVQYTTVYRSWLDCRDYGRVKSRAY*
Ga0070694_1006996471	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MGVPSSVPVPAAKALSGAYEEGIAGMLTIIKASLLASALMLLESCTGYLTSYQTPCVEGHVCECVQYTTIYRSWLDCRDYGRVKSRAY*
Ga0066689_104909481	3300005447	Soil	MGVPSSVPVPAAKALSGAYEEGIAGMLTIIKASLLASALMLLESCTGYLTSYQTPCVEGHVCECVQYTTIHRSWLDCRDYGRVKSRAY*
Ga0070706_1000651121	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	SSSMFCGHGGAFFRAFVPAAKALSGAYEEGIAGMLTIIKASLLASALMLLESCTGYLTSYQTPCVEGHVCECVQYTTIYRSWLDCRDYGRVKSRAY*
Ga0070698_1001133645	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	AFVPAAKALSGAYEEGIAGMLTIIKASLLASALMLLESCTGYLTSYQTPCVEGHVCECVQYTTIYRSWLDCRDYGRVKSRAY*
Ga0070698_1009974734	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	AFFHAFVPAAKALSGAYEEGIAGMLTIIKASLLGSALMLLESCTGYLTSYQTPCVEGHACECVRYTTVNRSWLDCRDYGRVKSRAY*
Ga0070697_1000676536	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MADAFFHAFVPAAKALSGAYEEGIAGMLTIIKASLLGSALMLLESCTGYLTNYQTPCVQGHVCECVQYTTVYRSWLDCRDYGRVKSRAY*
Ga0070704_1005986172	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MFCGHGGAFFRAFVPAAKALSGAYEEGIAGMLTIIKASLLASALMLLESCTGYLTSYQTPCVEGHVCECVRYTTVNRSWLDCRDYGRVKSRAY*
Ga0066661_102603932	3300005554	Soil	VDRSSIFCGHGGCFFHAFVPAAKALSGAYEEGIAGMLTIIKASLLGSALMLLESCTGYLTSYQTPCVEGHVCECVRYTTVNRSWLDCRDYGRVKSRAY*
Ga0066707_108145641	3300005556	Soil	MFCGHGGAFFRAFVPAAKALSGAYEEGIAGMLTIIKASLLASALMLLESCTGYLTSYQTPCVEGHVCECVQYTTIHRSWLDCRDYGRVKSRAY*
Ga0066700_100523456	3300005559	Soil	VDRSSIFCGHGGCFFHAFVPAAKALSGAYEEGIAGMLTIIKASLLGSALMLLESCTGYLTSYQTPCVEGHVCECVQYTTIYRSWLDCRDYGRVKSRAY*
Ga0066905_1010676681	3300005713	Tropical Forest Soil	MPAAKALSGACEEGIAGMLTIIKASLLGSALMLLESCTGYLTGYQTPCVEGHVCECVQYTTVYRSWLDCRDYGRVKSRAY*
Ga0066903_1010845282	3300005764	Tropical Forest Soil	MGDDAFFHAFVSPAKALSGAYEEGIAGMLTIIKASLLGSALMLLASCTGYLTNYQTPCVEGHVCECVRYTTVNRSWLDCRDYGRVKSRAY*
Ga0066903_1014784553	3300005764	Tropical Forest Soil	MFCGHGGAFFRAFAPAAKALSGAYEEGVAGMLTIIKASLLGSALMLLESCTGYLTSYQTPCVEGHVCECVRYTTVNRSWLDCRDYGRVKSRAY*
Ga0066903_1050397992	3300005764	Tropical Forest Soil	HAFVPAAKALSGAYEEGIAGMLTIIKASLLGSALMLLESCAGYLTNYQTPCVQGHVCECVQHTTVYRSWLDCRDYGRVKSRAY*
Ga0066903_1076788571	3300005764	Tropical Forest Soil	VATFSPAFCGPSIHLLWVWGAFFHAFVPAAKALSGAYEEGIAGMLTIIKASLLGSALMLLESCTGYLTSYQTPCVEGHVCECVQY
Ga0066903_1086674631	3300005764	Tropical Forest Soil	SGAYEEGIAGMLTIIKASLLGSALMLLESCTGYLTSYQTLCVQGHVCECVQYTTVYRSWLDCRDYGRVKSRAYLVTTARAV*
Ga0081455_100578297	3300005937	Tabebuia Heterophylla Rhizosphere	LDRRAKSYVFFRAFVPAAKTPSEPMKRGIASVLTIIKASLVGSALMLLASCTGYLTNYQTPCVQGHVCECRQYTTVYRSWLDCRDYGSVKSRAY*
Ga0075018_102599041	3300006172	Watersheds	ATFSPAFCGSSSSIFVGMGGAFFRAFVPAAKALSGAYEEGIEGMLTIIKASLLGSALMLLESCTDYLTSYQTPCVEGHVCECVRYTTINRSWLDCRDYGRVKSRAY*
Ga0075018_105901001	3300006172	Watersheds	MFCGHGGAFFRAFVPAAKALSGAYEEGIAGMLTIIKASLLGSALMLLESCTGYLTNYQTPCVQGHVCECVQYTTVYRSWLDCRDYGKVKSRAY*
Ga0075431_1019680472	3300006847	Populus Rhizosphere	LTDAEALRTAYERWIAGMLTIIKASLAGLALMLLAGTGYLTNYQMPCVQGHVCECIQYTTWNRSWLDCRDYGRARR*
Ga0075435_1009090762	3300007076	Populus Rhizosphere	MFCGHGGAFFRAFVPAAKALSGAYEEGIAGMLTIIKASLLGSALMLLESCTGYLTSYQTPCVEGHVCECVQYTTINRSWLDCRDYGRVKSRAY*
Ga0114129_118625242	3300009147	Populus Rhizosphere	MLTIKASFAGSALMLLASCTGGYYQPGTSGYYQPGTSTSYQTPCVQGHICECVQYTTVNRSWLDCPDYGRVRSRAYSKPIGGQY*
Ga0126374_101805481	3300009792	Tropical Forest Soil	MDRRHPSSLWAWGHASFRAFVSAAKALSGAYEEGIAGMLTIIKASLLGSALVLLESCTGYLTSYQTPCVEGHVCECVQYTTAYRSWLDCRDYGRVKSRAY*
Ga0126374_107318782	3300009792	Tropical Forest Soil	MGDDAFFHAFVPAAKALSGAYEEGIAGMLTIIKASLLGSALMLLESCTGYLTNYQTPCVQGHICECVQYTTLYRSWLDCRDYGRVKSRAY*
Ga0126384_102885321	3300010046	Tropical Forest Soil	MGDDAFFHAFVPAAKALSGAYEEGIAGMLTIIKASLLGSALMLLESCTGYLTSYQTPCVQGHVCECVQYTTVYRSWLDCRDYGRVKSRAY*
Ga0126384_107861361	3300010046	Tropical Forest Soil	VPAAKALSGAYEEGIAGMLTIIKASLLGSALMLLASCTGYLTSYQTPCVQGHVCECVQYTTVNRSWLDCRDYGRVKSRAY*
Ga0126384_114097451	3300010046	Tropical Forest Soil	MGDAFFRAFVPAAAKVPIGSLSTGDRGPMLTIIKASLLGSALILLEGSASLASYQTPCVQGHVCECVRYTTVNRSWVDCRSYGRVKYGRVK
Ga0126382_102967903	3300010047	Tropical Forest Soil	MGDDAFFHAFVPAAKALSGAYEEGIAGMLTIIKASLLGSALMLLASCTGYLTSYQTPCVQGHVCECVQYTTVNRSWLDCRDYGRVKSRAY*
Ga0134082_104073132	3300010303	Grasslands Soil	MFCGHGGAFFRAFVPAAKALSGAYEEGIAGMLTIIKASLLASALMLLESCTGYLTSYQTPCVEGHVCECVQYTTINRSWLDCRDYGRVKSRAY*
Ga0134111_101339611	3300010329	Grasslands Soil	MGGAFFRAFVPPAKALSGAYEEGIAGMLTIIKASLLASALMLLESCTGYLTSYQTPCVEGHVCECVQYTTINRSWLDCRDYGRVKSRAY*
Ga0126370_122061191	3300010358	Tropical Forest Soil	LRACRQRHLSGAYEEGIAGMLTIIKASLLGSALMLLASCTGYLTNYQTPCVEGHVCECERYTTLNRSWLDCRDYGRVKSRAY*
Ga0126372_114851661	3300010360	Tropical Forest Soil	MDRRHPSSLWAWGHASFRAFVSAAKALSGAYEEGIAGMLTIIKASLLGSALMLLESCTGYLTSYQTPCVEGHVCECVRYTTVNRSWLDCRDYGRVKSRAY*
Ga0126378_117265101	3300010361	Tropical Forest Soil	VGHDRGDAFFRAFVPSAKAPVGKEEGVAGMLTIIKASLLGSALMLLEGCTGYLTSYQTPCVEGHACECVRYTTVNRSWLDCRDYGRVKSRTY*
Ga0126378_126191251	3300010361	Tropical Forest Soil	MTWRASLWAWGHAFFRAFVPAAKALSGAYEEGIAGMLTIIKASLLGSALMLLESCAGYLTNYQTPCVEGHVCECVQYTTWNRSWLD
Ga0126377_119965171	3300010362	Tropical Forest Soil	MGDDAFFHAFVPAAKALSGAYEEGIAGMLTIIKASLLGSALMLLESCTGYLTNYQTPCVQGHVCECVQYTTVYRSWLDCRDYGRVKSRAY*
Ga0126379_106571321	3300010366	Tropical Forest Soil	MPSFVPSAKAPVGKEEGVAGMLTIIKASLLGSALMLLEGCTGYLTSYQTPCVEGHACECVRYTTVNRSWLDCRDYGRVKSRA
Ga0126383_107906571	3300010398	Tropical Forest Soil	FFRAFVSAAKALSGAYEEGIAGMLTIIKASLLGSALMLLESCTGYLTSYQTPCVEGHVCECVQYTTVYRSWLDCRDYGRVKSRAY*
Ga0126383_109507062	3300010398	Tropical Forest Soil	MGGAFFRAFVPAAKALSGAYEEGIAGMLTIIKASLLGSALILLDGCSYLASYQTPCVEGHVCECVRYTTVNRSWLDCRDYGRVKSRGY*
Ga0137392_103184932	3300011269	Vadose Zone Soil	VDRSSIFCGHGGCFFHAFVPAAKALSGAYEEGIAGMLTIIKASLLRSALMLLESCTGYLTNYQTPCVEGHVCECVQYTTVYRSWLDCRDYGRVKSRGY*
Ga0137383_101846056	3300012199	Vadose Zone Soil	AAKALSGAYEEGIAGMLTIIKASLLGSALMLLESCTGYLTSYQTPCVEGHVCECVQYTTVYRSWLDGRGYGRVKTRAY*
Ga0137383_104200121	3300012199	Vadose Zone Soil	VDRSSIFCGHGGCFFHAFVPAAKALSGAYEEGIAGMLTIIKASLLGSALMLLESCTGYLTNYQTPCVEGHVCECVQYTTINRSWLDCRDYGRVKTRAY*
Ga0137374_101894353	3300012204	Vadose Zone Soil	MGGAFFRAFVPAAKALSGAYEEGIAGMLTIIKASLLGSALMLLESCTGYLTSYQTPCVEGHVCECVQYTTVYRSWLDCRDYGRVKSRAY*
Ga0137362_104358652	3300012205	Vadose Zone Soil	VDRSSIFCGHGGCFFHAFVPAAKALSGAYEEGIAGMLTIIKASLLGSALMLLESCTGYLTNYQTPCVEGHVCECVQYTTINRSWLDCRDYGRVKSRAY*
Ga0137380_102376172	3300012206	Vadose Zone Soil	MGGAFFRAFVPPAKALSGAYEEGIAGMLTIIKASLLGSALMLLESCTGYLTSYQTPCVEGHVCECVRYTTINRSWLDCRDYGRVKSRAYTNPQIE*
Ga0137381_103987952	3300012207	Vadose Zone Soil	MGGAFFRAFVPPAKALSGAYEEGIAGMLTIIKASLLGSALMLLESCTGYLTSYQTPCVEGHVCECVQYTTVYRSWLDCRDYGRVKSRAY*
Ga0137376_113430881	3300012208	Vadose Zone Soil	VDRSSIFCGHGGCFFHAFVPAAKALSGAYEEGIAGMLTIIKASLLGSALMLLESCTGYLTSYQTPCVEGHVCECVQYTTIHRSWLDCRDYGRVKSRAY*
Ga0137387_111061181	3300012349	Vadose Zone Soil	MGGAFFRAFVPAAKALSGAYEEGIAGMLTIIKASLLGSALMLLESCTGYLTSYQTPCVEGHVCECVRYTTVNRSWLDCRDYGRVKSRAY*
Ga0137386_105543471	3300012351	Vadose Zone Soil	MGGAFFRAFVPPAKALSGAYEEGIAGMLTIIKASLLGSALMLLESCTGYLTSYQTPCVEGHVCECVQYTTIYRSWLDCRDYGRVKSRAY*
Ga0137366_110715811	3300012354	Vadose Zone Soil	VLRGGLKNAHAVECAPGGRRGAFFRALVPAAKALSGAYEEGIAGMLTIIKASLLGSALMLLESCTGYLTSYQTPCVEGLVCECVRYTTVNRSWLDCRDYGRVKSRAY*
Ga0137371_103610975	3300012356	Vadose Zone Soil	AAKALSGAYEEGIAGMLTIIKASLLGSALMLLESCTGYLTNYQTPCVQGHVCECVQYTTVYRSWLDCRDYGRVKSRAY*
Ga0137360_103549162	3300012361	Vadose Zone Soil	VDRSSIFCGHGGCFFHAFVPAAKALSGAYEEGIAGMLTIIKASLLGSALMLLESCTGYLTNYQTPCVQGHVCECVQYTTVYR
Ga0137360_105169732	3300012361	Vadose Zone Soil	GAFFRAFVPAAKALSGAYEEGIAGMLTIIKASLLGSALMLLESCTGYLTSYQTPCVEGHVCECVQYTTIYRSWLDCRDYGRVKSRAY*
Ga0137361_104552742	3300012362	Vadose Zone Soil	VDRSSIFCGHGGCFFHAFVPAAKALSGAYEEGIAGMLTIIKASLLGSALMLLESCTGYLTNYQTPCVEGHVCECVQYTTIYRSWLDCRDYGRVKTRAY*
Ga0137361_106194883	3300012362	Vadose Zone Soil	MFCGHGGAFFRAFVPAAKALSGAYEEGIAGMLTIIKASLLGSALMLLESCTGYLTSYQTPCVEGHVCECVQYTTIYRSWLDCRDYGRVKSRAY*
Ga0137361_116739472	3300012362	Vadose Zone Soil	MEGAFFRAFVPAAKASIGGEEGVAGMLTIIKASLLGSALMLLEGCGYLTSYQTPCVQGHVCECVRYTTVNRSWLDCRSYGRVKSRAY*
Ga0137395_111600461	3300012917	Vadose Zone Soil	VGMADAFFHAFVPAAKALSGAYEEGIAGMLTIIKASLLGSALMLLEGCASYLTSYQTPCVQGHVCECIRYTTVNRSWLDCRSYGRVKSTAY*
Ga0137404_119983351	3300012929	Vadose Zone Soil	EGAFFRAFVPAAKASIGGEEGVAGMLTIIKASLLGSALMLLEGCGYLTSYQTPCVQGHVCECVRYTTVNRSWRDCRSYGRVKSRAY*
Ga0126375_114134181	3300012948	Tropical Forest Soil	MEGAFLRAFVPATKAYEEGVPDMLTIIKASLLGSALMLLESCTGYLTSYQTPCVEGHVCECVQYTTVYRSWLDCRDYGRVKSRAY*
Ga0164308_119352251	3300012985	Soil	MGDAFFRAFVLAAKALSRAYQEGIAGMPTIIKASLLASALMLLESCTGYLTSYQTPCVEGHVCECVRYTTVNRSWLDCRDYGRVKSRAY*
Ga0137403_106177592	3300015264	Vadose Zone Soil	MGDAFFRAFVPAAKALSGAYEEGIAGMLTIIKASLLGSALMLLESCTGYLTSYQTPCVEGHVCECVRYTTVNRSWLDCRDYGRVKSRAY*
Ga0182032_113955141	3300016357	Soil	MGVAFFHAFVPAAKALSGGYEEGIAGMLTIIKASLLASALMLLESCAGYLTSYQTPCVEGHVCECVRYTTVNRSWLDCRDYGRVKS
Ga0182034_100549774	3300016371	Soil	LSGAYEEGIAGMLTIIKASLLGSALMLLESCAGYLTSYQTPCVEGHVCECVQYTTVNRSWVDCRDYGRVKSRAY
Ga0182040_101566654	3300016387	Soil	GHGGTSAPSCLPQRHLSGAYEEGIAGMLTIIKASLLGFALMLLESCAGYLTSYQTPCVEGHVCECVQYTTVNRSWVDCRDYGRVKSRAY
Ga0182039_105501333	3300016422	Soil	VIHLLWAWEGVAFFFRAFGPAAKSPIGGEEGGAGMLTIIKASLLGSALMLLESCTGYLTNYQTPCVEGHVCECVRYTTVNRSWLDCRDYGRPKSRAY
Ga0182039_117815471	3300016422	Soil	FVPAAKALSGAYEEGIAGMLTIIKASLLGSALMLLESCTGYLTSYQTPCIEGHVCECVQYTTINRSWLDCRDYGRVKSRVY
Ga0182038_116013951	3300016445	Soil	MGVAFFHAFVPAAKALSGGYEEGIAGMLTIIKASLLASALMLLESCAGYLTSYQTPCVEGHVCECVRYTTVNRSWLD
Ga0182038_120112082	3300016445	Soil	AFFRAFVPAAKAPIGGDERVAVLLTIIKASLLGSALMLLEGCGYLTSYQTPCVQGHVCECVRYTTVNRSWLDCRSYGRVKSTAY
Ga0134083_103189662	3300017659	Grasslands Soil	MGGAFFHAFVPAAKALSGAYEEGIAGMLTIIKASLLASALMLLESCTGYLTSYQTPCVEGHVCECVQYTTVYRSWLDCRDYGRVK
Ga0184640_102902641	3300018074	Groundwater Sediment	IYSLFFCGHGGITPRAIARLHKRGVGGMLTIIKASVVGSALMLLASCAGYLTNYQTPCVQGHVCECVQYTTVNRSWLDCRDYGRVKSKAY
Ga0066655_106898792	3300018431	Grasslands Soil	MFCGHGGAFFRAFVPAAKALSGAYEEGIAGMLTIIKASLLASALMLLESCTGYLTSYQTPCVEGHVCECVQYTTIYRSWLDCRDYGRVKSRAY
Ga0066662_123938751	3300018468	Grasslands Soil	MADAFFHAFVPAAKALSGAYEEGIAGMLTIIKASLLGSALMLLESCTGYLTSYQTPCVEGHVCECVQYTTINRSWLDCRDYGRVKSRAY
Ga0210404_108590841	3300021088	Soil	AFFRAFVPSAKAPVGKEEGVAGMLTIIKASLLGSALMLLEGCTGYLTGYQTPCVEGHVCECVRYTTVNRSWLDCRDYGRVKSRAY
Ga0213872_100652942	3300021361	Rhizosphere	MPSFVPSAKAPVGKEEGVAGMLTIIKASLLGSALMLLEGCTGYLTSYQTPCVEGHACECVRYTTVNRSWLDCRDYGRVKSRAD
Ga0126371_123185191	3300021560	Tropical Forest Soil	FFHAFVPAAKALSGVYEEGIAGMLTIIKASLLGSALMLLESCTGYLTNYQTPCVQGHVCECVQYTTVYRSWLDCRDYGRVKSRAY
Ga0126371_124499321	3300021560	Tropical Forest Soil	VIHLLWGMRGGMPSFVPSAKAPVGKEEGVAGMLTIIKASLLGSALMLLEGCTGYLTSYQTPCVEGHACECVRYTTVNRSWLDCRDYGRVKSRAY
Ga0207684_100029246	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MGVPSSVPVPAAKALSGAYEEGIAGMLTIIKASLLASALMLLESCTGYLTSYQTPCVEGHVCECVQYTTIYRSWLDCRDYGRVKSRAY
Ga0207646_108694111	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	DRRDPSSVGHERGMPASAPFVPSAKAPVGKEEGVAGMLTIIKASLLGSALMLLEGCGYTTSYQTPCVQGHVCECVRYTTVNRSWLDCRSYGRVKSTAY
Ga0209239_10304161	3300026310	Grasslands Soil	SMFCGHGGAFFRAFVPAAKALSGAYEEGIAGMLTIIKASLLASALMLLESCTGYLTSYQTPCVEGHVCECVQYTTIYRSWLDCRDYGRVKSRAY
Ga0209154_10680731	3300026317	Soil	MGDAFFRAFVPAAKALSGAYEEGIAGMLTIIKASLLASALMLLESCTGYLTSYQTPCVEGHVCECVRYTTVNRSWLDCRDYGRVKSRAY
Ga0209799_10412361	3300027654	Tropical Forest Soil	MGDDAFFHAFVPAAKALSGAYEEGIAGMLTIIKASLLGSALMLLESCTGYLTSYQTPCVQGHVCECVQYTTVYRSWLDCRDYGRVKSRAY
Ga0209689_10879603	3300027748	Soil	VDRSSIFCGHGGCFFHAFVPAAKALSGAYEEGIAGMLTIIKASLLASALMLLESCTGYLTSYQTPCVEGHVCECVQYTTIYRSWLDCRDYGRVKSRAY
Ga0209488_105177172	3300027903	Vadose Zone Soil	VDRSSIFCGHGGCFFHAFVPAAKALSGAYEEGIAGMLTIIKASLLGSALMLLESCTGYLTNYQTPCVEGHVCECVQYTTIYRSWLDCRDYGRVKSRAY
Ga0318516_100802013	3300031543	Soil	MEDARAFVPAAKALSRLYEEGIAGMLTMIKASLLGSALMLLASCTDYLTNYQTPCVQGHVCECVRYTTLNRSWLDCRDYGRVKSRAY
Ga0318541_104891621	3300031545	Soil	MGVAFFHAFVPAAKALSGGYEEGIAGMLTIIKASLLASALMLLESCAGYLTSYQTPCVEGHVCECVRYTTVNRSWLDCRDYGRVKSRAH
Ga0310915_101185084	3300031573	Soil	GDDAFFHAFVPAAKALSGAYEEGIAGMLTIIKASLLGSALMLLESCTGYLTNYQTPCVEGHICECVQYTTLYRSWLDCRDYGRVKSRAY
Ga0310915_102486151	3300031573	Soil	VIHLLWAWEGVAFFFRAFGPAAKSPIGGEEGGAGMLTIIKASLLGSALMLLESCTGYLTNYQTPCVEGHVCECVRYTTVNRSWLDCRD
Ga0318574_101226254	3300031680	Soil	CLLWTVDPSSVGMGDDAFFHAFVPAAKALSGAYEEGIAGMLTIIKASLLGSALMLLESCTGYLTNYQTPCVEGHICECVQYTTLYRSWLDCRDYGRVKSRAY
Ga0318574_107442081	3300031680	Soil	MGVAFFHAFVPAAKALSGGYEEGIAGMLTIIKASLLASALMLLESCAGYLTSYQTPCVEGHVCECVRYTTVNRSWLDCRDYGRVKSRA
Ga0318560_101257073	3300031682	Soil	PSVDRRHSSSVGMEDARAFVPAAKALSRLYEEGIAGMLTMIKASLLGSALMLLASCTDYLTNYQTPCVQGHVCECVRYTTLNRSWLDCRDYGRVKSRAY
Ga0306917_102103783	3300031719	Soil	MGMGVAFFHAFVPAAKALSGGYEEGIAGMLTIIKASLLASALMLLESCAGYLTSYQTPCVEGHVCECVRYTTVNRSWLDCRDYGRVKSRAH
Ga0306918_108355361	3300031744	Soil	MGDDAFFHAFVPAAKALSGAYEEGIAGMLTIIKASLLGSALMLLESCTGYLTNYQTPCVQGHVCECVQYTTVYRSWLDCRDYGRVKSRAY
Ga0318492_104351282	3300031748	Soil	LLWTVHPSSMGMGVAFFHAFVPAAKALSGGYEEGIAGMLTIIKASLLASALMLLESCAGYLTSYQTPCVEGHVCECVRYTTVNRSWLDCRDYGRVKSRAY
Ga0318543_104294921	3300031777	Soil	VPAAKALSGAYEEGIAGMLTIIKASLLGSALMLLESCTGYLTNYQTPCVQGHICECVQYTTLYRSWLDCRDYGRVKSRAY
Ga0318508_12217981	3300031780	Soil	MGVAFFHAFVPAAKALSGGYEEGIAGMLTIIKASLLASALMLLESCAGYLTSYQTPCVEGHVCECVRYTTVNRSWLDC
Ga0318529_100080705	3300031792	Soil	PSYLPRRHLSGAYEEGIAGMLTIIKASLLGSALMLLESCAGYLTSYQTPCVEGHVCECVQYTTVNRSWVDCRDYGRVKSRAY
Ga0318548_105606622	3300031793	Soil	MGDDAFFHAFVPAAKALSGAYEEGIAGMLTIIKASLLGSALMLLESCTGYLTNYQTPCVEGHICECVQYTTLYRSWLDCRDYGRVK
Ga0318503_100393713	3300031794	Soil	TSAPSYLPRRHLSGAYEEGIAGMLTIIKASLLGSALMLLESCAGYLTSYQTPCVEGHVCECVQYTTVNRSWVDCRDYGRVKSRAY
Ga0318576_104774041	3300031796	Soil	PSSVGMGDDAFFHAFVPAAKALSGAYEEGIAGMLTIIKASLLGSALMLLESCTGYLTNYQTPCVQGHVCECVQYTTVYRSWLDCRDYGRVKSRAY
Ga0318550_103262232	3300031797	Soil	MGVAFFHAFVPAAKALSGGYEEGIAGMLTIIKASLLASALMLLESCAGYLTSYQTPCVEGHVCECVRYTTVNRSWLDCRDYGRVKSRAY
Ga0318568_104011242	3300031819	Soil	MGDDAFFHAFVPAAKALSGAYEEGIAGMLTIIKASLLGSALMLLESCTGYLTNYQTPCVQGHICECVQYTTLYRSWLDCRDYGRVKSRAY
Ga0318517_100589541	3300031835	Soil	MGMGVAFFHAFVPAAKALSGGYEEGIAGMLTIIKASLLASALMLLESCAGYLTSYQTPCVEGHVCECVRYTTVNRSWLDCRDYGRVKSRAY
Ga0306919_115212142	3300031879	Soil	SVDRRHPSSVGMGDDAFFHAFVPAAKALSGAYEEGIAGMLTIIKASLLGSALMLLESCTGYLTNYQTPCVEGHICECVQYTTLYRSWLDCRDYGRVKSRAY
Ga0318544_102522301	3300031880	Soil	MGDDAFFHAFVPAAKALSGAYEEGIAGMLTIIKASLLGSALMLLESCTGYLTNYQTPCVEGHICECVQYTTLYRSWLDCRDYGRVKSRAY
Ga0306925_105501053	3300031890	Soil	VIHLLWAWEGVAFFFRAFGPAAKSPIGGEEGGAGMLTIIKASLLGSALMLLESCTGYLTNYQTPCVEGHVCECVRYTTVNRSWLDCRDYGRLKSRAY
Ga0318551_104289521	3300031896	Soil	GHGRAFFRAFVPAAKAPIGGDERVAVLLTIIKASLLGSALMLLEGCGYLTSYQTPCVQGHVCECVRYTTVNRSWLDCRSYGRVKSTAY
Ga0306923_102908134	3300031910	Soil	HPSSVGMGDDAFFHAFVPAAKALSGAYEEGIAGMLTIIKASLLGSALMLLESCTGYLTNYQTPCVEGHICECVQYTTLYRSWLDCRDYGRVKSRAY
Ga0306923_124679461	3300031910	Soil	FVPAAKALSGAYEEGIAGMLTIIKASLLGSALMLLESCTGYLTNYQTPCVQGHICECVQYTTLYRSWLDCRDYGRVKSRAY
Ga0310912_101919441	3300031941	Soil	FFHAFVPAAKALSGGYEEGIAGMLTIIKASLLASALMLLESCAGYLTSYQTPCVEGHVCECVRYTTVNRSWLDCRDYGRVKSRAY
Ga0310912_111411541	3300031941	Soil	MGVAFFHAFVPAAKALSGGYEEGIAGMLTIIKASLLASALMLLESCAGYLTSYQTPCVEGHVCECVRYTTVNRSWLDCRDYG
Ga0310913_103713242	3300031945	Soil	LPQRHLSGAYEEGIAGMLTIIKASLLGFALMLLESCAGYLTSYQTPCVEGHVCECVQYTTVNRSWVDCRDYGRVKSRAY
Ga0310909_100822924	3300031947	Soil	VIHLLWAWGVAFFFRAFGPAAKSPIGGEEGGAGMLTIIKASLLGSALMLLESCTGYLTNYQTPCVEGHVCECVRYTTVNRSWLDCRDYGRPKSRAY
Ga0310909_101522961	3300031947	Soil	TPFCGHGRAFFRAFVPAAKAPIGGDERVAVLLTIIKASLLGSALMLLEGCGYLTSYQTPCVQGHVCECVRYTTVNRSWLDCRSYGRVKSTAY
Ga0310909_101838351	3300031947	Soil	MGDDAFFHAFVPAAKALSGAYEEGIAGMLTIIKASLLGSALMLLESCTGYLTNYQTPCVQGHICECVQYTTVYRSWLDCRDYGRVKSRAY
Ga0306926_111578491	3300031954	Soil	FVPSAKAPVGGEEGVADMLTIIKASLLGSALMLLEGCTGYLTSYQTPCVEGHACECVRYTTVNRSWLDCRDYGRVKSRAY
Ga0318531_100607204	3300031981	Soil	MGDDAFFHSFVPAAKALSGAYEEGIAGMLTIIKASLLGSALMLLESCTGYLTNYQTPCVEGHICECVQYTTLYRSWLDCRDYGRVKSRAY
Ga0306922_102515361	3300032001	Soil	PSSVGMGDDAFFHAFVPAAKALSGAYEEGIAGMLTIIKASLLGSALMLLESCTGYLTNYQTPCVEGHICECVQYTTLYRSWLDCRDYGRVKSRAY
Ga0310911_103075921	3300032035	Soil	PQRHLSGAYEEGIAGMLTIIKASLLGFALMLLESCAGYLTSYQTPCVEGHVCECVQYTTVNRSWVDCRDYGRVKSRAY
Ga0318556_104674201	3300032043	Soil	DDAFFHAFVPAAKALSGAYEEGIAGMLTIIKASLLGSALMLLESCTGYLTSYQTPCVQGHVCECVQYTTVYRSWLDCRDYGRVKSRAY
Ga0318506_105592551	3300032052	Soil	VDRRHSSSVGMEDARAFVPAAKALSRLYEEGIAGMLTMIKASLLGSALMLLASCTDYLTNYQTPCVQGHVCECVRYTTLNRSWLDCRDYGRVKSRAY
Ga0318533_112913712	3300032059	Soil	DDAFFHAFVPAAKALSGAYEEGIAGMLTIIKASLLGSALMLLESCTGYLTNYQTPCVQGHICECVQYTTLYRSWLDCRDYGRVKSRAY
Ga0318504_101114051	3300032063	Soil	SMGMGVAFFHAFVPAAKALSGGYEEGIAGMLTIIKASLLASALMLLESCAGYLTSYQTPCVEGHVCECVRYTTVNRSWLDCRDYGRVKSRAH
Ga0318510_100854543	3300032064	Soil	GDDAFFHAFVPAAKALSGAYEEGIAGMLTIIKASLLGSALMLLESCTGYLTNYQTPCVQGHICECVQYTTVYRSWLDCRDYGRVKSRAY
Ga0318513_104220521	3300032065	Soil	LLWTVHPSSVGMGDDAFFHAFVPTAKALSGAYEEGIAGMLTIIKASLLGSALMLLESCTGYLTNYQTPCVEGHICECVQYTTLYRSWLDCRDYGRVKSRAY
Ga0306924_109802051	3300032076	Soil	LPPTPFVPAAKALSGAYEEGIAGMLTIIKASLLGSALMLLESCTGYLTSYQTPCIEGHVCECVQYTTINRSWLDCRDYGRVKSRVY
Ga0306924_121943061	3300032076	Soil	PAAKALSGAYEEGIAGMLTIIKASLLGSALMLLESCTGYLTSYQTPCVEGHVCECVQYTTINRSWLDCRDYGRVKSRAY
Ga0318540_100221464	3300032094	Soil	DAFFHAFVPAAKALSGAYEEGIAGMLTIIKASLLGSALMLLESCTGYLTNYQTPCVEGHICECVQYTTLYRSWLDCRDYGRVKSRAY

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F054319

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences