Metagenome / Metatranscriptome Family F054290

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F054290
Family Type	Metagenome / Metatranscriptome
Number of Sequences	140
Average Sequence Length	91 residues
Representative Sequence	MFGFAITATFVSYQLLTDSQSPIQRDSALMAVFVVLCPPSLLSVAFDPEVGTNNYYFLWTLIALLNAGLYATVRALVSRRLQRPE
Number of Associated Samples	98
Number of Associated Scaffolds	140

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	7.14 %
% of genes near scaffold ends (potentially truncated)	27.14 %
% of genes from short scaffolds (< 2000 bps)	72.86 %
Associated GOLD sequencing projects	85
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.40

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (95.714 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (16.429 % of family members)
Environment Ontology (ENVO)	Unclassified (33.571 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (55.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 60.18% β-sheet: 0.00% Coil/Unstructured: 39.82%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.40
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.40
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 140 Family Scaffolds
PF02673	BacA	52.14
PF13491	FtsK_4TM	5.00
PF00291	PALP	4.29
PF08239	SH3_3	4.29
PF13442	Cytochrome_CBB3	2.14
PF13419	HAD_2	1.43
PF10101	DUF2339	1.43
PF13525	YfiO	1.43
PF02627	CMD	0.71
PF13240	zinc_ribbon_2	0.71
PF13231	PMT_2	0.71
PF00078	RVT_1	0.71
PF05163	DinB	0.71

COG ID	Name	Functional Category	% Frequency in 140 Family Scaffolds
COG1968	Undecaprenyl pyrophosphate phosphatase	Lipid transport and metabolism [I]	52.14
COG0599	Uncharacterized conserved protein YurZ, alkylhydroperoxidase/carboxymuconolactone decarboxylase family	General function prediction only [R]	0.71
COG2128	Alkylhydroperoxidase family enzyme, contains CxxC motif	Inorganic ion transport and metabolism [P]	0.71
COG2318	Bacillithiol/mycothiol S-transferase BstA/DinB, DinB/YfiT family (unrelated to E. coli DinB)	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.71

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	96.43 %
Unclassified	root	N/A	3.57 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	95.71 %
Unclassified	root	N/A	3.57 %
Viruses	superkingdom	All Organisms → Viruses	0.71 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	95.71 %
Unclassified	root	N/A	3.57 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.71 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	86.43 %
Unclassified	root	N/A	3.57 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.71 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	45.00 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	40.71 %
Unclassified	root	N/A	3.57 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.71 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	45.00 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	40.71 %
Unclassified	root	N/A	3.57 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.71 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	45.00 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	40.71 %
Unclassified	root	N/A	3.57 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.71 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	45.00 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	18.57 %
Unclassified	root	N/A	3.57 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.71 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	45.00 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	11.43 %
Unclassified	root	N/A	3.57 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.71 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_101485479	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1338	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101495576	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1294	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101497569	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	666	Open in IMG/M
3300000789\|JGI1027J11758_12670900	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	878	Open in IMG/M
3300000955\|JGI1027J12803_100587126	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1883	Open in IMG/M
3300004101\|Ga0058896_1231345	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	685	Open in IMG/M
3300004119\|Ga0058887_1423558	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	728	Open in IMG/M
3300005167\|Ga0066672_10792106	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	597	Open in IMG/M
3300005177\|Ga0066690_10025412	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	3373	Open in IMG/M
3300005180\|Ga0066685_10869258	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	605	Open in IMG/M
3300005332\|Ga0066388_100274737	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	2327	Open in IMG/M
3300005332\|Ga0066388_105012897	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	673	Open in IMG/M
3300005435\|Ga0070714_101957929	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	572	Open in IMG/M
3300005439\|Ga0070711_100280873	Not Available	1317	Open in IMG/M
3300005526\|Ga0073909_10106722	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1115	Open in IMG/M
3300005542\|Ga0070732_10000413	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	27745	Open in IMG/M
3300005542\|Ga0070732_10136682	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1456	Open in IMG/M
3300005554\|Ga0066661_10106515	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1682	Open in IMG/M
3300005764\|Ga0066903_101207567	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1405	Open in IMG/M
3300005764\|Ga0066903_101683749	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1207	Open in IMG/M
3300005764\|Ga0066903_108743448	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	515	Open in IMG/M
3300006028\|Ga0070717_10084578	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2669	Open in IMG/M
3300006028\|Ga0070717_10133085	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2140	Open in IMG/M
3300006052\|Ga0075029_100092763	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1804	Open in IMG/M
3300006052\|Ga0075029_100575613	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	750	Open in IMG/M
3300006086\|Ga0075019_10042034	All Organisms → cellular organisms → Bacteria	2578	Open in IMG/M
3300006162\|Ga0075030_100127012	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2070	Open in IMG/M
3300006162\|Ga0075030_100145649	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1918	Open in IMG/M
3300006162\|Ga0075030_100148297	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1899	Open in IMG/M
3300006162\|Ga0075030_100301730	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1280	Open in IMG/M
3300006162\|Ga0075030_100367900	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1146	Open in IMG/M
3300006173\|Ga0070716_100415972	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	971	Open in IMG/M
3300006174\|Ga0075014_100132479	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1200	Open in IMG/M
3300006175\|Ga0070712_100157005	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1753	Open in IMG/M
3300009792\|Ga0126374_10832117	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	708	Open in IMG/M
3300010043\|Ga0126380_10405058	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1015	Open in IMG/M
3300010043\|Ga0126380_10538200	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	906	Open in IMG/M
3300010043\|Ga0126380_11310300	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	631	Open in IMG/M
3300010046\|Ga0126384_11803723	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	581	Open in IMG/M
3300010048\|Ga0126373_10049809	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3718	Open in IMG/M
3300010048\|Ga0126373_10750607	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1036	Open in IMG/M
3300010359\|Ga0126376_10862418	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	891	Open in IMG/M
3300010360\|Ga0126372_10715990	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	979	Open in IMG/M
3300010361\|Ga0126378_10880660	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1002	Open in IMG/M
3300010361\|Ga0126378_12985635	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	539	Open in IMG/M
3300010376\|Ga0126381_100052563	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4996	Open in IMG/M
3300010376\|Ga0126381_100768583	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1382	Open in IMG/M
3300010398\|Ga0126383_10177297	All Organisms → cellular organisms → Bacteria	2021	Open in IMG/M
3300010398\|Ga0126383_10437135	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1354	Open in IMG/M
3300011120\|Ga0150983_16074082	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2217	Open in IMG/M
3300012201\|Ga0137365_10613652	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	797	Open in IMG/M
3300012205\|Ga0137362_11239344	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	631	Open in IMG/M
3300012361\|Ga0137360_10473732	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1063	Open in IMG/M
3300012948\|Ga0126375_10140583	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1506	Open in IMG/M
3300012971\|Ga0126369_10037285	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4051	Open in IMG/M
3300012971\|Ga0126369_10191088	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1966	Open in IMG/M
3300012971\|Ga0126369_11280437	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	823	Open in IMG/M
3300012971\|Ga0126369_11293958	Not Available	819	Open in IMG/M
3300012984\|Ga0164309_10318784	All Organisms → cellular organisms → Bacteria	1128	Open in IMG/M
3300015371\|Ga0132258_10809448	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	2362	Open in IMG/M
3300015371\|Ga0132258_12987204	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1173	Open in IMG/M
3300015373\|Ga0132257_100119785	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3056	Open in IMG/M
3300015374\|Ga0132255_100061007	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	4964	Open in IMG/M
3300015374\|Ga0132255_105296859	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	546	Open in IMG/M
3300016294\|Ga0182041_10676798	All Organisms → cellular organisms → Bacteria	913	Open in IMG/M
3300016357\|Ga0182032_10531719	All Organisms → cellular organisms → Bacteria	971	Open in IMG/M
3300016357\|Ga0182032_10589288	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	924	Open in IMG/M
3300016371\|Ga0182034_10371293	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1167	Open in IMG/M
3300016404\|Ga0182037_10886332	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	773	Open in IMG/M
3300016404\|Ga0182037_11699683	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	562	Open in IMG/M
3300016445\|Ga0182038_11529277	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	599	Open in IMG/M
3300017823\|Ga0187818_10088306	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1339	Open in IMG/M
3300017924\|Ga0187820_1181208	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	649	Open in IMG/M
3300017959\|Ga0187779_10937309	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	598	Open in IMG/M
3300017999\|Ga0187767_10259054	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	576	Open in IMG/M
3300018006\|Ga0187804_10265765	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	742	Open in IMG/M
3300018007\|Ga0187805_10052671	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1828	Open in IMG/M
3300020579\|Ga0210407_10016536	All Organisms → cellular organisms → Bacteria → Acidobacteria	5469	Open in IMG/M
3300020579\|Ga0210407_10388225	All Organisms → cellular organisms → Bacteria	1092	Open in IMG/M
3300020581\|Ga0210399_10039449	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	3780	Open in IMG/M
3300020581\|Ga0210399_10105438	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2308	Open in IMG/M
3300020582\|Ga0210395_10024220	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	4459	Open in IMG/M
3300021088\|Ga0210404_10031898	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2365	Open in IMG/M
3300021180\|Ga0210396_10144647	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	2137	Open in IMG/M
3300021180\|Ga0210396_10179744	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1894	Open in IMG/M
3300021181\|Ga0210388_11187532	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	648	Open in IMG/M
3300021404\|Ga0210389_10226114	All Organisms → cellular organisms → Bacteria	1462	Open in IMG/M
3300021420\|Ga0210394_10249081	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1555	Open in IMG/M
3300021474\|Ga0210390_10373497	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1206	Open in IMG/M
3300021476\|Ga0187846_10078265	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1437	Open in IMG/M
3300021559\|Ga0210409_10048433	All Organisms → cellular organisms → Bacteria	4004	Open in IMG/M
3300021559\|Ga0210409_10118883	Not Available	2430	Open in IMG/M
3300021560\|Ga0126371_10038681	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4508	Open in IMG/M
3300021560\|Ga0126371_10072230	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3360	Open in IMG/M
3300021560\|Ga0126371_12875794	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	584	Open in IMG/M
3300025916\|Ga0207663_10229679	Not Available	1355	Open in IMG/M
3300025929\|Ga0207664_10434108	All Organisms → Viruses → Predicted Viral	1171	Open in IMG/M
3300025939\|Ga0207665_10430822	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1009	Open in IMG/M
3300026309\|Ga0209055_1189326	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	632	Open in IMG/M
3300026333\|Ga0209158_1127369	Not Available	948	Open in IMG/M
3300026845\|Ga0207760_117587	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	578	Open in IMG/M
3300027548\|Ga0209523_1007618	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1919	Open in IMG/M
3300027821\|Ga0209811_10023511	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	2027	Open in IMG/M
3300027842\|Ga0209580_10000337	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	27418	Open in IMG/M
3300027898\|Ga0209067_10048314	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	2169	Open in IMG/M
3300027898\|Ga0209067_10129756	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1327	Open in IMG/M
3300027911\|Ga0209698_10007501	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	11452	Open in IMG/M
3300027911\|Ga0209698_10044729	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3927	Open in IMG/M
3300027911\|Ga0209698_10143549	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1963	Open in IMG/M
3300027911\|Ga0209698_10283750	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1315	Open in IMG/M
3300028792\|Ga0307504_10025913	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1509	Open in IMG/M
3300031057\|Ga0170834_101470356	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1474	Open in IMG/M
3300031198\|Ga0307500_10032559	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1188	Open in IMG/M
3300031231\|Ga0170824_107440687	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	527	Open in IMG/M
3300031573\|Ga0310915_11305401	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	500	Open in IMG/M
3300031715\|Ga0307476_10144796	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1703	Open in IMG/M
3300031718\|Ga0307474_10184493	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1584	Open in IMG/M
3300031719\|Ga0306917_10475702	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	980	Open in IMG/M
3300031753\|Ga0307477_10365186	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	991	Open in IMG/M
3300031820\|Ga0307473_10471051	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	841	Open in IMG/M
3300031820\|Ga0307473_11215136	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	561	Open in IMG/M
3300032001\|Ga0306922_10548247	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1229	Open in IMG/M
3300032064\|Ga0318510_10484863	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	534	Open in IMG/M
3300032076\|Ga0306924_12170708	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	567	Open in IMG/M
3300032174\|Ga0307470_10006939	All Organisms → cellular organisms → Bacteria	4510	Open in IMG/M
3300032180\|Ga0307471_100225399	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1903	Open in IMG/M
3300032180\|Ga0307471_100501643	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1361	Open in IMG/M
3300032180\|Ga0307471_101182421	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	929	Open in IMG/M
3300032770\|Ga0335085_10000222	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	177685	Open in IMG/M
3300032770\|Ga0335085_10343909	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1751	Open in IMG/M
3300032782\|Ga0335082_10000586	All Organisms → cellular organisms → Bacteria	37997	Open in IMG/M
3300032783\|Ga0335079_10415777	All Organisms → cellular organisms → Bacteria	1447	Open in IMG/M
3300032783\|Ga0335079_11123674	All Organisms → cellular organisms → Bacteria	794	Open in IMG/M
3300032828\|Ga0335080_10000025	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	175835	Open in IMG/M
3300032829\|Ga0335070_10020467	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	7647	Open in IMG/M
3300032829\|Ga0335070_10083890	All Organisms → cellular organisms → Bacteria	3381	Open in IMG/M
3300032892\|Ga0335081_10033529	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	8233	Open in IMG/M
3300033004\|Ga0335084_10032793	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	5323	Open in IMG/M
3300033004\|Ga0335084_11077795	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	807	Open in IMG/M
3300033433\|Ga0326726_10229335	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1723	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.43%
Host-Associated	Host-Associated	3.57%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	82.86%
Aquatic	Environmental → Aquatic	13.57%
Plants	Host-Associated → Plants	3.57%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	81.43%
Sediment	Environmental → Aquatic → Sediment	10.71%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.57%
Freshwater	Environmental → Aquatic → Freshwater	2.86%
Peat	Environmental → Terrestrial → Peat	0.71%
Cave	Environmental → Terrestrial → Cave	0.71%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	58.57%
Loam	Environmental → Terrestrial → Soil → Loam	13.57%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	10.71%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	9.29%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.57%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.86%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.71%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.71%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	26.43%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	24.29%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	10.71%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	9.29%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	7.86%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.14%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.43%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.57%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.86%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.71%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.71%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	16.43%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	11.43%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	10.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	7.86%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	7.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	7.14%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	6.43%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.00%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	4.29%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	3.57%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	3.57%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.86%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.14%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.14%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.43%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.43%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.43%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.71%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	0.71%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300004101	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF228 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004119	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF210 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017999	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_10_MG	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021476	Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2)	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026309	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)	Environmental	Open in IMG/M
3300026333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)	Environmental	Open in IMG/M
3300026845	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 24 (SPAdes)	Environmental	Open in IMG/M
3300027548	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028792	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_S	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031198	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 14_S	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1014854792	3300000364	Soil	MVGFAITAVFVSYQFITDSHSAILRDSAYMLVFIVLCPPSLLSLGIDAEVGTNSFYFLWTVIALLNAGLYATIRMLLSRRLQRRN*
INPhiseqgaiiFebDRAFT_1014955762	3300000364	Soil	MFGFAITAIFVSYQLLTDSQSPIHRDSSLMVVFVVLCPPSLLSIAFDPEVGTNNFYFLWTVIALLNAGLYVXVRALVGRHLQHPD*
INPhiseqgaiiFebDRAFT_1014975692	3300000364	Soil	MFGIAITAIFVSYQLLTDAQSPLQRDSTLMVVFVVLCPPSLLSIAFDPEVGTHNFYFLWSVIALLNAGLYATLRAL
JGI1027J11758_126709002	3300000789	Soil	MFGFAITAIFVSYQLLTDSQSPIHRDSSLMVVFVVLCPPSLLSIAFDPEVGTNNFYFLWTVIALLNAGLYVTVRALVGRRLQHPD*
JGI1027J12803_1005871262	3300000955	Soil	MFGIAITAIFVSYQLLTDAQSPLQRDSTLMVVFVVLCPPSLLSIAFDPEVGTHNFYFLWSVIALLNAGLYATLRALVGRRLQHPD*
Ga0058896_12313452	3300004101	Forest Soil	RRHSPTTFSRASQRTVTPAINPMNAIGRRHFTAAMFGFAITATFVSYQLLTDSQSPIQRDSALMAVFVVLCPPSLLSVAFDPEVGTNNYYFLWTLIALLNAGFYATIRALVGRRLQRPE*
Ga0058887_14235581	3300004119	Forest Soil	MFGFAITATFVSYQLLTDSQSPIQRDSALMAVFVALCPPSLLSVAFDPEVGTNNYYFLWTLIALLNAGLYATVRALVSRRLQRPE*
Ga0066672_107921062	3300005167	Soil	PMNAIGRRHFTAAMFGFAITATFVSYQLLTDSQSPIQRDSALMAVFVVLCPPSVLSVALDPEVGTNNYYFLWTLIALLNAGLYATIRALVSRRLQRPE*
Ga0066690_100254122	3300005177	Soil	MFGFAITATFVSYQLLTDSQSPIQRDSALMAVFVVLCPPSVLSVALDPEVGTNNYYFLWTLIALLNAGLYATIRALVSRRLQRPE*
Ga0066685_108692582	3300005180	Soil	MFGFAITATFVSYQLLTDSQSPIQRDSALMAVFVVLCPPSVLSVALDPEVGTNNYYFLWTLIALLNAWLYATIRALVSRRLQRPE
Ga0066388_1002747372	3300005332	Tropical Forest Soil	MLGFAITAVFVSFQLLTDTQSSISRSPALMLAFVVLCPPSLLSVALDPDVGTSSFYLLWTVIALLNACLFATVRALLTRRRQRPD*
Ga0066388_1050128972	3300005332	Tropical Forest Soil	MFGFAITAVFVSYQLLTDSQSPIQRDSAYMLGFVILCPPSLLSLAFDPEVGTNHFYAIWTVVGLMNAGLYATIRVLLRRLERRH*
Ga0070714_1019579292	3300005435	Agricultural Soil	MFGFAITATFVSYQLLTDSQSPIQRDSALMAVFVVLCPPSLLSVAFDPEVGTNNYYFLWTLIALLNAGLYATVRAFVSRRLQRPD*
Ga0070711_1002808732	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	FVSYQLLTDTQSSISRSSTLMLVFVVLCPPSLLSVALDPDVGTNSFYVLWTVIALLNAGLFATVRALVTRRQQRPD*
Ga0073909_101067222	3300005526	Surface Soil	MSAIRRRHFTAAMFGFAITAIFVSYQLLTDSQSPIHRDSSLMVVFVVLCPPSLLSIAFDPEFGTNNFYFLWTVIALLNAGLYATVRALVGKRLQHPD*
Ga0070732_1000041318	3300005542	Surface Soil	MFGFAITATFVSYQLLTDSPSPIQRDSALMAVFVVLCPPSLLSVAFDPEVGTNNYYFLWTVIALLNAGLYATVRALVSRRLQRPD*
Ga0070732_101366822	3300005542	Surface Soil	MFGFAITATFVSYQLLTDSQSPIQRDSALMAVFVVLCPPSLLSVAFDPEVGTNNYYFLWTLIALLNAGLYATVRGLVSRRLQRPE*
Ga0066661_101065152	3300005554	Soil	MNAIGRRHFTAAMFGFAITATFVSYQLLTDSQSPIQRDSALMAVFVVLCPPSVLSVALDPEVGTNNYYFLWTLIALLNAGLYATIRALVSRRLQRPE*
Ga0066903_1012075672	3300005764	Tropical Forest Soil	MSELGRRPFSAAMFGFAITAIFISYQLLTDAQSSLPRESAFMILFVVLCPPSLLAVAFDPDVGSNGFYLLWTVIALMNAGLYATIRTLLFRRLQRPD*
Ga0066903_1016837492	3300005764	Tropical Forest Soil	MFGFAITAVFVSYQLLTDPQSPIHRDSAFMVLFVVLCPPSLLSIALDPDVGSNAFYLLWTLVALLNAGLYASVRVLLLRRMQRPE*
Ga0066903_1087434481	3300005764	Tropical Forest Soil	MFGFAITAVFVSYQLLTDPQSPLHRDSAFMILFLVLCPPSLLSITFDPEVGTNAFYLLWTLVALLNAGLYATVRALLLRRLERPD*
Ga0070717_100845782	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MLGFAITAIFVSYQLLTDTQSSISRSSTLMLVFVVLCPPSLLSVALDPDVGTNSFYVLWTVIALLNAGLFATVRALVTRRQQRPD*
Ga0070717_101330852	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MSEFGRRSFSAAMFGFAITAAFISYQLITDAQSPVPRDSTFMILFIVLCPPSLLSVVFDPDVGSNGFYLLWTVVALMNAGLYATIRALLFKRLQRPD*
Ga0075029_1000927632	3300006052	Watersheds	MFGFAVAAIFVSYQLLTDSQSPIQRNPAFMIGFVILCPPSLLSVAIDTEAGTSGFYILWTVIALMNAGLYTAIRMLLAKRLQHPD*
Ga0075029_1005756132	3300006052	Watersheds	STTFSRAFPRTAMPATKHMNAVGRGRFTAAMFGFAITAIFVSYQMLTDSQSPIQRDSALMIVFVILCPPSLLSIAFGPEVGTNHFYFLWIVIALLNAGLYATVRALVARRLHHPD*
Ga0075019_100420342	3300006086	Watersheds	MFGFAITAIFVSYQMLTDSQSPIQRDSALMIVFVILCPPSLLSIAFGPEVGTNHFYFLWIVIALLNAGLYATVRALVARRLHHPD*
Ga0075030_1001270123	3300006162	Watersheds	TKHMNAVGRRRFTAAMFGFAITAIFVSYQMLTDSQSPIQRDSALMIVFVILCPPSLLSIAFGPEVGTNHFYFLWIVIALLNAGLYATVRALVARRLHHPD*
Ga0075030_1001456492	3300006162	Watersheds	MFGFAITAIFVSYQLLTDSQSPIQRDSAFMVGFVVLCPPSLLSIAFDPEVGTNNFYFLWTVIAILNAGLYATIRAFVARRLQRPD*
Ga0075030_1001482974	3300006162	Watersheds	MPATKHMNAVGRRRFTAAMFGFAITAIFVSYQMLTDLQSPIQRDSALMIVFIILCPPSLLSIAFGPEVGTNHFYFLWIVIALLNAGLYATVRALVARRLHH
Ga0075030_1003017302	3300006162	Watersheds	MFGFAITAIFVSYQLLTDSQSPIQRDSAFMIGFVVLCPPSLLSIAFDPEVGTNNYYFLWTVIALLNAGLYAITRTLVSRRLQRPE*
Ga0075030_1003679002	3300006162	Watersheds	MGAFRRLFSAARFGFAVAAVFVCYQLLTDSQSPISRNSILMLVFVVVCPPSLLSIAFDPEVGTNNFYFLWTVIAILNAGLYATIRALVGRRLQRPE*
Ga0070716_1004159722	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	GFAITAIFVSYQLLTDSQSPIQRDSALMMVFVILCPPSLLSIASNPEVGTNNHYFLWTVIALLNAGLYTAVRALVGRRLQRPE*
Ga0075014_1001324792	3300006174	Watersheds	MFGFAITAIFVSYQLLTDSQSPIQRDSAFMVGFVVLCPPSLLSIAFDPEVGTNNFYFLWTVIAILNAGLYATIRALIGRRLQRPE*
Ga0070712_1001570052	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MNAIGRRHFTAAMFGFAITATFVSYQLLTDSQSPVQRDSALMAVFVVLCPPSLLSVAFDPEVGTNNYYFLWTLIALLNAGLYATVRAFVSRRLQRPD*
Ga0126374_108321172	3300009792	Tropical Forest Soil	MATPPINCMSDSGRRPFSAGMFGFAITAVFVSYQLLTDPQSPLHRDSAFMILFLVLCPPSLLSIAFDPEVGTNGFYLLWTLVALMNAGLYASVRVLLIRRLQRPD*
Ga0126380_104050582	3300010043	Tropical Forest Soil	MSDSGRRPFSAAMFGFAITAVFVSYQLLTDPQSPLHRDSAFMILFLVLCPPSLLSIAFDPEVGTNAFYLLWTLVALMNAGLYASVRVLLIRRLQRPD*
Ga0126380_105382002	3300010043	Tropical Forest Soil	MLGFAITAVFVSFQLLTDTQSSISRSPALMLAFVVLCPPSLLSVALDPDVGTSSFYLLWTVIALLNACLFATVRALLTRRLQRPD*
Ga0126380_113103001	3300010043	Tropical Forest Soil	MRAPGRKTFGSAMFGFAITAVFVSYQLLTDLQSPISRNSLLMIVLVILCPPSLLSVAADPEVGTNGFYALWAVIALMNAGLYATIRTLILRRMKKAD*
Ga0126384_118037232	3300010046	Tropical Forest Soil	FAITAVFVSYQLLTDPQSPIHRDSAFMVLFVVLCPPSLLSIALDPDVGSNAFYLLWTLVALLNAGLYASVRVLLLRRMQRPE*
Ga0126373_100498092	3300010048	Tropical Forest Soil	MGTFRRFFSSARFGFAVAGVFVCYQLLTDSQSPISRNSLLMTVFVVLCPPSLLSVAFDPELGTKDFYTIWTVIGLMNAALYATVRIFLSRRLQHPD*
Ga0126373_107506072	3300010048	Tropical Forest Soil	GRRSFTTAMFGFAITAVFVSYQLLTDSQSPIQRDSAYMLGFVILCPPSLLSLAFDPEVGTNRFYVIWMVVGLMNAGLYATIRVLLRRLERRD*
Ga0126376_108624181	3300010359	Tropical Forest Soil	MSELGRRPFSAAMFGFAITAIFISYQLLTDAQSSLPRESEFMILFVVLCPPSLLAVAFDPDVGSNGFYLLWTVIALMNAGLYATIRTLLFRRLQRPD*
Ga0126372_107159901	3300010360	Tropical Forest Soil	MFGFAITAVFVSYQLLTDPQSPLHRDSAFMILFLVLCPPSLLSIAFDPEVGTNGFYLLWTLVALMNAGLYASVRVLLIRRLQRPD*
Ga0126378_108806601	3300010361	Tropical Forest Soil	MSDSGRRSFSAAMFGFAITAAFISYQLLTDTQSPIARDSGFMILFVVLCPPSLLSVAFDPEIGSHSFYVLWTLIALMNAGFYATIRVLLFRRLQRPD*
Ga0126378_129856352	3300010361	Tropical Forest Soil	MFGFAITAVFVSYQLLTDLQSPIHRDSAFMILFLVLCPPSLLSIAFDPEVGTNAFYLLWTLVALLNAGLYATVRALLLRRLERPD*
Ga0126381_1000525633	3300010376	Tropical Forest Soil	MNKVGRRSFTTAMFGFAITAVFVSYQLLTDSQSPIQRDSAYMLGFVILCPPSLLSLAFDPEVGTNHFYAIWTVVGLMNAGLYATIRVLLRRLERRH*
Ga0126381_1007685832	3300010376	Tropical Forest Soil	MAMFGFAITAFFVSYQMLTASESPIPRDSAYMLGFVIMCPPSLLSMAFDPEVGTNRFYALWTVIALMNAGLYATIRALLSKRL*
Ga0126383_101772972	3300010398	Tropical Forest Soil	MSDSGRRPFSAAMFGFAITAVFVSYQLLTDLQSPIHRDSAFMILFLVLCPPSLLSITFDPEVGTNAFYLLWTLVALLNAGLYATVRALLLRRLERPD*
Ga0126383_104371352	3300010398	Tropical Forest Soil	MSELGRRPFSAAMFGFAITAIFVSYQLLTDSLSALHRDSTFMLLFIVLCPPSLLSVSVIDAEVGSNGFYFLWTVIALMNAGLYAGIRILVSQWVQRRERQRD*
Ga0150983_160740822	3300011120	Forest Soil	MNAIGRRHFTAAMFGFAITATFVSYQLLTDSQSPIQRDSALMAVFVALCPPSLLSVAFDPEVGTNNYYFLWTLIALLNAGLYATVRALVSRRLQRPE*
Ga0137365_106136522	3300012201	Vadose Zone Soil	MSDTGRRYFGSAVLGLAITAAFVSYQLVTDAQSPISRSSSLMMVFVVLCPPSFLSIAFREPEVGTNAFFFLWTVVAVLNGMLYAGVRALIGRRLQRPD*
Ga0137362_112393442	3300012205	Vadose Zone Soil	RHFTAAMFGFAITATFVSYQLLTDSQSPIQRDSALMAVFVVLCPPSVLSVALDPEVGTNNYYFLWTLIALLNAGLYATIRALLSRRLQRPE*
Ga0137360_104737321	3300012361	Vadose Zone Soil	AAMFGFAITATFVSYQLLTDSQSPIQRDSALMAVFVVLCPSSLLSIASNPEVGTNYYYSLWTAIALLNAGLYATVRALVSRRLQRPE*
Ga0126375_101405832	3300012948	Tropical Forest Soil	NAMNAPGRRLFGSAMLGFAITAVFVSYQLLADTQSSISRSSTLMLAFVVLCPPSLLSVALDPDVGTSSFYLLWTVIALLNAGLFATVRALLTRRLQRPD*
Ga0126369_100372852	3300012971	Tropical Forest Soil	MSDSGRRSFSAAMFGFAITAAFISYQLLTDAQSPVPRDSGFMILFIVLCPPSLLSVAFDPDVGSNGFYLLWTLVALMNAGLYATIRVLLFKRLQRPD*
Ga0126369_101910882	3300012971	Tropical Forest Soil	MNAPGRRLFGPAMLGFAITAVFVSYQLLRDTQSSISRSSTLMLAFVVLCPASLLSVALDPDVGTSRFYLLWTVIALLNAGLFATVRARLTRRLQRPD*
Ga0126369_112804371	3300012971	Tropical Forest Soil	GRRLFRSAMLGFAITAVFVSFQLLTDTQSSISRSPALMLAFVVLCPPSLLSVALDPDVGTSSFYLLWTVIALLNACLFATVRALLTRRLQRPD*
Ga0126369_112939581	3300012971	Tropical Forest Soil	TQATNCMSELGRRPFSAAMFGFAITAIIVSYQLLTDSLSALHRDSTFMLLFIVLCPPSLLSVSVIDAEVGSNGFYFLWTVIALMNAGLYAGIRILVSQWVQRRERQRD*
Ga0164309_103187842	3300012984	Soil	MKALGRRHFTAAMFGFAITAIFVSYQMLTDLQSPIQRDSALMIVFVVLCPPSLLSIAFDPEVGTNHFYFLWTVIALLNAGLYATVRALVARRLQHPD*
Ga0132258_108094482	3300015371	Arabidopsis Rhizosphere	MSAIRRRHFTAAMFGFAITAVFVSYQLLTDSQSPIHRDSSLMVVFVVLCPPSLLSIAFDPEFGTNNFYFLWTVIALLNAGLYATVRALVGKRLQHPD*
Ga0132258_129872042	3300015371	Arabidopsis Rhizosphere	MSMHGRGGISSVFFGVAITAVFVSYQLLTDVQAPISRSSTLMMLFVFLCPPSLLSVAMDPEVGTSNFYFLWTVIALLNAGLYATVRALISGRLQRRGSRH*
Ga0132257_1001197853	3300015373	Arabidopsis Rhizosphere	MNAPSRRLFGSAMLGFAITAIFVSYQLLTDTQSSISRSSTLMLVFVVLCPPSLLSVALDPDVGTNSFYVLWTVIALLNAGLFATVRALVTRRQQRPD*
Ga0132255_1000610073	3300015374	Arabidopsis Rhizosphere	MNAPSRRLFGSAMLGFAITAIFVSYQLLTDTQSSISRSSTLMLVFVFLCPPSLLSVALDPDVGTNSFYVLWTVIALLNAGLFATVRALVTRRQQRPD*
Ga0132255_1052968592	3300015374	Arabidopsis Rhizosphere	MHGRGGISSVFFGVAITAVFVSYQLLTDVQAPISRSSTLMMLFVFLCPPSLLSVAMDPEVGTSNFYFLWTVIALLNAGLYATVRALISGRLQRRGSRH*
Ga0182041_106767982	3300016294	Soil	MFGFAITAAFISYQMLTDAQSPVLRDSAFMILFVVLCPPSLLSVAFDPDVGSNGFYLLWTLVALMNAGLYATI
Ga0182032_105317192	3300016357	Soil	LLADAESPIRRDSAYVLGPVLLCPPCLLSPAFDPEVGANRFYALWTVIALMKAGWYAAIRVLRLNRLER
Ga0182032_105892882	3300016357	Soil	AIAAAFACYQLLTDSQSPISRNSLLMMVFIVLCPPSLLSVAFDPELGAKNFYAIWTVIGMMNAALYATIRVFLSKRLQRPD
Ga0182034_103712932	3300016371	Soil	MGAFRRLFRAARFGFAIAAAFACYQLLTDSQSPISRNSLLMMVFIVLCPPSLLSVAFDPELGAKNFYAIWTVIGMMNAALYATIRVFLSKRLQRPD
Ga0182037_108863321	3300016404	Soil	MGMPATNSMGAFRRLFRAARFGFAIAAAFACYQLLTDSQSPISRNSLLMMVFIVLCPPSLLSVAFDPELGAKNFYAIWTVIGMMNAALYATIRVFVSKRLQRPD
Ga0182037_116996831	3300016404	Soil	MFGFAITAAFISYQMLTDAQSPVLRDSAFMILFVVLCPPSLLSVAFDPDVGSNGFYLLWTLVALMNAGLYA
Ga0182038_115292772	3300016445	Soil	MFGFAITAAFISYQMLTDAQSPVLRDSAFMILFVVLCPPSLLSVAFDPDVGSNGFYLLWTLVALMNAGLYATIRVLLFKRLQRPD
Ga0187818_100883062	3300017823	Freshwater Sediment	MFGFAITAIFVSYQLLTDSQSPIQRNSAFMIGFVILCPPSLLSVAIDTEAGTNGFYILWTAIALMNAGLYTAIRMLISRRLQRPD
Ga0187820_11812082	3300017924	Freshwater Sediment	AIKHMTAPGRRHFRAAMFGFAITAIFVSYQLLTDSQSPIQRNSAFMIGFVILCPPSLLSVAIDTEAGTNGFYILWTAIALMNAGLYTAIRMLISRRLQRPD
Ga0187779_109373091	3300017959	Tropical Peatland	MSATASGIFRTAMFGFAITAIFVSYQLLTDVQSPLSRNSALMTVFVILCPPSLLSVAIDPEVGTNGYYSLWAVIAVLNAGLYATVRRLISCRLKKAD
Ga0187767_102590542	3300017999	Tropical Peatland	MRTPGRSSFGFAMFGFAITAIFVSYQLLTDLQSPISRNPSLMVVLVILCPPSLLSVVADPEVGTNGYYVLWTVLALMNAAVYATVRSLILRRMTKAD
Ga0187804_102657651	3300018006	Freshwater Sediment	QLLTDSQFPIQRNSALMIGFVILCPPSLLSVAIDTEAGTNGFYILWTAIALMNAGLYTAIRMLISRRLQRPD
Ga0187805_100526713	3300018007	Freshwater Sediment	YIRSAVVGLVVTAAFVRYQLLTDPQSPITRNPVLMVMFVVLCPPSLLSLAFDPEVGTGNYYFLWTLIALMNAAMYATVRVLRSRRLRGPG
Ga0210407_100165361	3300020579	Soil	MNAIGRRHFTAAMFGFAITATFVSYQLLTDSQSLIQRDSGLMAVFVVLCPPSLLSVAFDPEVGTNNYYFLWTLIALLNAGLYATVRAFVGRRLQRPD
Ga0210407_103882252	3300020579	Soil	MFGFAITATFVSYQLLTDSQSLIQRDSGLMAVFVVLCPPSLLSVAFDPEVGTNNYYFLWTLIALLNAGFYATIRALVSRRLQRPE
Ga0210399_100394493	3300020581	Soil	MNAIGRRHFTAAMFGFAITAIFVSYQLLTDSQSPIERESALMMVFVVLCPPSLLSIASNPEVGTNNYYFLWTLIALLNAGFYATVRALVSRRLQRPD
Ga0210399_101054382	3300020581	Soil	MNAIGRRHFTAAMFGFAITATFVSYQLLTDSQSLIQRDSGLMAVFVVLCPPSLLSVAFDPEVGTNNYYFLWTLIALLNAGFYATIRALVSRRLQRPE
Ga0210395_100242202	3300020582	Soil	MFGFAITATFVSYQLLTDSQSPIQRDSALMAVFVALCPPSLLSVAFDPEVGTNNYYFLWTLIALLNAGLYATVRALVSRRLQRPE
Ga0210404_100318983	3300021088	Soil	MNAIGRRHFTAAMFGFAITATFVSYQLLTDSQSPVQRDSALMAVFVVLCPPSLLSVAFDPEVGTNNYYFLWTLIALLNAGLYATVRALVSRRLQRPE
Ga0210396_101446472	3300021180	Soil	MFGFAITATFVSYQLLTDSQSPIQRDSALMAVFVVLCPPSLLSVAFDPEVGTNNYYFLWTLIALLNAGFYATIRALVGRRLQRPE
Ga0210396_101797443	3300021180	Soil	MFGFAITATFVSYQLLTDSQSPIQRDSALMAVFVVLCPPSLLSVAFDPEVGTNNYYFLWTLIALLNAGLYATVRALVSRRLQRPE
Ga0210388_111875321	3300021181	Soil	MNAIGRRHFTAAMFGFAITATFVSYQLLTDSQSLIQRDSGLMAVFVVLCPPSLLSVAFDPEVGTNNYYFLWTLIALLNAGLYATVRAF
Ga0210389_102261142	3300021404	Soil	MNAIGRRDFTAAMFGFAITATFVSYQLLTDSQSPIQRDSALMAVFVALCPPSLLSVAFDPEVGTNNYYFLWTLIALLNAGLYATVRALVSRRLQRPE
Ga0210394_102490812	3300021420	Soil	MFGFAITATFVSYQLLTDSQSPIQRDSALMAVFVVLCPPSLLSVAFDPEVGTNNYYFLWTLIALLNAGLYATVRGLVSRRLQR
Ga0210390_103734972	3300021474	Soil	MNAIGRRDFTAAMFGFAITATFVSYQLLTDSQSPIQRDSALMAVFVVLCPPSLLSVAFDPEVGTNNYYFLWTLIALLNAGLYATVRALVSRRLQRPE
Ga0187846_100782651	3300021476	Biofilm	MSALGRLHFRAAMYGFAVAALFVSYQLITDSQSPLQRDSRFMLAFIVLCPPSLLSIAVDPEVGTHSYYALWTLIAFMNAALYATIRSLLRRRLQRPD
Ga0210409_100484332	3300021559	Soil	MFGFAITATFVSYQLLTDSQSPIQRDSALMAVFVVLCPPSLLSVAFDPEVSTNNYYFLWTLIALLNAGLYATVRGLVSRRLQRPE
Ga0210409_101188831	3300021559	Soil	YQLLTDSQSPIQRDSALMAVFVVLCPPSLLSVAFDPEVGTNNYYFLWTLIALLNAGFYATIRALVGRRLQRPE
Ga0126371_100386814	3300021560	Tropical Forest Soil	MSELGRRPFSAAMFGFAITAIFISYQLLTDAQSSLPRESAFMILFVVLCPPSLLAVAFDPDVGSNGFYLLWTVIALMNAGLYATIRTLLFRRLQRPD
Ga0126371_100722302	3300021560	Tropical Forest Soil	MFGFAITAAFISYQLLTDAQSPVPRDSGFMILFIVLCPPSLLSVAFDPDVGSNGFYLLWTLVALMNAGLYATIRVLLFKRLQRPD
Ga0126371_128757941	3300021560	Tropical Forest Soil	MNKVGRRSFTTAMFGFAITAVFVSYQLLTDSQSPIQRDSAYMLGFVILCPPSLLSLAFDPEVGTNHFYAIWTVVGLMNAGLY
Ga0207663_102296792	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	ITAIFVSYQLLTDTQSSISRSSTLMLVFVVLCPPSLLSVALDPDVGTNSFYVLWTVIALLNAGLFATVRALVTRRQQRPD
Ga0207664_104341082	3300025929	Agricultural Soil	MSEFGRRSFSAAMFGFAITAAFISYQLITDAQSPVPRDSTFMILFIVLCPPSLLSVVFDPDVGSNGFYLLWTVVALMNAGLYATIRALLFKRLQRPD
Ga0207665_104308221	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	GFAITAIFVSYQLLTDSQSPIQRDSALMMVFVILCPPSLLSIASNPEVGTNNHYFLWTVIALLNAGLYTAVRALVGRRLQRPE
Ga0209055_11893262	3300026309	Soil	MFGFAITATFVSYQLLTDSQSPIQRDSALMAVFVVLCPPSVLSVALDPEVGTNNYYFLWTLIALLNAGLYATIRALVSRRLQRPE
Ga0209158_11273691	3300026333	Soil	ATFVSYQLLTDSQSPIQRDSALMAVFVVLCPPSVLSVALDPEVGTNNYYFLWTLIALLNAGLYATIRALVSRRLQRPE
Ga0207760_1175872	3300026845	Tropical Forest Soil	MDTFRRLFSSARFGFAVAATFACYQLLTDSQSPISRNSIAMVVFVVLCPPSLLSVAVDPEIGTKDFYAIWTVIGLLNAALYATIRMFLSKRLQRPD
Ga0209523_10076182	3300027548	Forest Soil	MNAIGRRHFTAAMFGFAITATFVSYQLLTDSQSPIHRDSALMAVFVVLCPPSLLSVAFDPEVGTNNYYFLWTVIALLNAGLFATIRALVSRRLQRPE
Ga0209811_100235113	3300027821	Surface Soil	MSAIRRRHFTAAMFGFAITAIFVSYQLLTDSQSPIHRDSSLMVVFVVLCPPSLLSIAFDPEFGTNNFYFLWTVIALLNAGLYATVRALVGKRLQHPD
Ga0209580_100003379	3300027842	Surface Soil	MFGFAITATFVSYQLLTDSPSPIQRDSALMAVFVVLCPPSLLSVAFDPEVGTNNYYFLWTVIALLNAGLYATVRALVSRRLQRPD
Ga0209067_100483142	3300027898	Watersheds	MFGFAITAIFVSYQMLTDSQSPIQRDSALMIVFVILCPPSLLSIAFGPEVGTNHFYFLWIVIALLNAGLYATVRALVARRLHHPD
Ga0209067_101297562	3300027898	Watersheds	MFGFAVAAIFVSYQLLTDSQSPIQRNPAFMIGFVILCPPSLLSVAIDTEAGTSGFYILWTVIALMNAGLYTAIRMLLAKRLQHPD
Ga0209698_100075014	3300027911	Watersheds	MFGFAITAIFVSYQMLTDLQSPIQRDSALMIVFIILCPPSLLSIAFGPEVGTNHFYFLWIVIALLNAGLYATVRALVARRLHHPD
Ga0209698_100447292	3300027911	Watersheds	MNAIGRRHFTAAMFGFAITAIFVSYQLLTDSQSPIQRDSAFMVGFVVLCPPSLLSIAFDPEVGTNNFYFLWTVIAILNAGLYATIRAFVARRLQRPD
Ga0209698_101435492	3300027911	Watersheds	MGAFRRLFSAARFGFAVAAVFVCYQLLTDSQSPISRNSILMLVFVVVCPPSLLSIAFDPEVGTNNFYFLWTVIAILNAGLYATIRALVGRRLQRPE
Ga0209698_102837502	3300027911	Watersheds	MNAPARRHFTAAMFGFAITAIFVSYQLLTDSQSPIQRDSAFMIGFVVLCPPSLLSIAFDPEVGTNNYYFLWTVIALLNAGLYAITRTLVSRRLQRPE
Ga0307504_100259132	3300028792	Soil	MFGFAITAIFVSYQILTDSQSLIQRDSSLMVVFIVLCPPSLLSIAFDPEVGTSHFYFLWTVIALVNAGLYVTVRALVGRRLQHPD
Ga0170834_1014703562	3300031057	Forest Soil	MNAIGRRHFTAAMFGFAITATFVSYQLLTDSQSLIQRDSGLMAVFVVLCPPSLLSVAFDPEVGTNNYYFLWTLIALLNAGFYATIRALVSRRLQRSE
Ga0307500_100325592	3300031198	Soil	MFGFAITAIFVSYQLLTDSQSPIQRDSSLMVVFIVLCPPSLLSIAFDPEVGTNNFYFLWTVIALLNAGLYASIRAFVARRLQHPD
Ga0170824_1074406871	3300031231	Forest Soil	LCARIRWFSTCSREFRRSATRAIKHMRAIERRHSTAAMFGIAITAIFVSYQLLTDSQSPLLRDSALMVVFVVLCPPSLLSIAFDPEVGTNNFYFLWTVIALLNAGLYATVRALVARRLQHPE
Ga0310915_113054011	3300031573	Soil	MGAFRRLFRAARFGFAIAAAFACYQLLTDSQSPISRNSLLMMVFIVLCPPSLLSVAFDPELGAKNFYAIWTVIGMMNAALYATIRVSVSKRLQRPD
Ga0307476_101447962	3300031715	Hardwood Forest Soil	MNAIGRRHFTAAMFGFAITATFVSYQLLTDSQSPIQRDSALMAVFVVLCPPSLLSVAFDPEVGTNNYYFLWTLIALLNAGLYATVRALVSRRLQRPE
Ga0307474_101844932	3300031718	Hardwood Forest Soil	MFGFAITATFVSYQLLTDSQSPIQRDSGLMAVFVVLCPPSLLSVAFDPEVGTNNYYFLWTLIALLNAGLYATVRALVGRRLQRPE
Ga0306917_104757021	3300031719	Soil	AFLRTATPATNCMSDSGRRSFSAAMFGFAITAAFISYQMLTDAQSPVLRDSAFMILFVVLCPPSLLSVAFDPDVGSNGFYLLWTLVALMNAGLYATIRVLLFKRLQRPD
Ga0307477_103651862	3300031753	Hardwood Forest Soil	MFGFAITATFVSYQLLTDSQSPIQRDSALMAVFVVLCPPSLLSVAFDPEVGTNNYYFLWTLIALLNAGLYATVRA
Ga0307473_104710512	3300031820	Hardwood Forest Soil	MFGFAITAIFVSYQLLTDSQSPIHRDSSLMVVFVVLCPPSLLSIAFDPEFGTNNFYFLWTVIALLNAGLYATVRALVGKRLQHPD
Ga0307473_112151362	3300031820	Hardwood Forest Soil	MNAIGRRHFTAAMFGFAITATFVSYQLLTDSQSPIQRDSALMAVFVVLCPPSLLSVAFDPEVGTNNYYFLWTLIALLNAGLYATVRAFVSRRLQRPD
Ga0306922_105482472	3300032001	Soil	MFGFAITAAFISYQLLTDAQSPVLRDSAFMILFVVLCPPSLLSVAFDPDVGSNGFYLLWTLVALMNAGLYATIRVLLFKRLQRPD
Ga0318510_104848632	3300032064	Soil	MFGFAITAAFISYQMLTDAQSPVLRDSAFMILFVVLCPPSLLSVAFDPDVGSNGFYLLWTLVALMNAGLYATIR
Ga0306924_121707082	3300032076	Soil	MGMPATNSMGAFRRLFRAARFGFAIAAAFACYQLLTDSQSPISRNSLLMMVFIVLCPPSLLSVAFDPELGAKNFYAIWTVIGMMNAALYATIRVSVSKRLQRPD
Ga0307470_100069394	3300032174	Hardwood Forest Soil	MFGIAITAIFVSYQLLTDSQSPLQRDSTLMVVFVVLCPPSLLSIAFDPEVGTNNFYFLWTVIALLNAGLYTTVRALVGSRLQHPD
Ga0307471_1002253992	3300032180	Hardwood Forest Soil	MNAIGRRHFTAAMFGFAITATFVSYQLLTDSQSPIQRDSALMAVFVVLCPPSLLSVAFDPEVGTNNYYFLWTLIGLLNAGLYATVRAFVSRRLQRPD
Ga0307471_1005016432	3300032180	Hardwood Forest Soil	MRAVERRHFTAAVFGIAVTAIFVSYQLLTDSQSPLLRDSALMVVFVVLCPPSLLSIAFDPEVGTNNFYFLWTVIALLNAGLYATVRAL
Ga0307471_1011824211	3300032180	Hardwood Forest Soil	RRCSTTFSREFRRSATRAIKHMRAIERRHFTAAMFGIAITAIFVSYQLLTDSQSPLQRDSTLMVVFVVLCPPSLLSIAFDPEVGTNNFYFLWTVIALLNAGLYTTVRALVGSRLQHPD
Ga0335085_1000022260	3300032770	Soil	MNAPSRRYFNAAMFGFAITALFVSYQLITDSQSVIQRDSAFMLAFVVLCPPSLLYLAIEPEAGTNNFYLLWTAIALMNAALYLAMQFLLAKRLQRRN
Ga0335085_103439092	3300032770	Soil	MNAPSGRYFNAAMFGFAITALFVSYQLVTDSQPVIQRDSAFMLAFVVLCPPSLLSLTVEPEARTNVFYLLWTLIALMNAGLYAGAHFLLARRLQRHD
Ga0335082_1000058611	3300032782	Soil	MFGFAITALFVSYQLITDSQSVIQRDSAFMLAFVVLCPPSLLYLAIEPEAGTNNFYLLWTAIALMNAALYLAMQFLLAKRLQRRN
Ga0335079_104157772	3300032783	Soil	MRTPGRNSFGFAMFGFAITAIFVSYQLLTDLQGPIPRNSMLMLVLIILCPPSLLSTAIDTEVGTNGYYLLWAAIAVINAGLYATIRALILRRIKKAD
Ga0335079_111236742	3300032783	Soil	MFGFAITAVFVSYQLLTDMESSPLSRNSSLMIALVILCPPSLLSVATDPELGSNGYYALWTVIALMNAGLYATIRMLISRRMKKAD
Ga0335080_10000025106	3300032828	Soil	MRSALFGVGITAVFVSYQLLTGLDSPVSRNPALMLVFVVLCPPSLLSLAIDKEVGTNAFYVLWTVIALLNAALFATVRTLLARRAQRPD
Ga0335070_100204674	3300032829	Soil	MFGFAITAIFLSYQMLTDSQSALHRDSTFMLLFIGLCPPSLLSLAIDTEIGTNHFYILWTVIGLMNAGLYAAIRILVSRRFQRR
Ga0335070_100838903	3300032829	Soil	MFGFAITALFLSYQMITDSQSTIQRDSAFMLVFAVLCPPSLLALAIDPPAETTAFYLLWTVIALLNAGLYASVRTFVSRRLQRPE
Ga0335081_100335295	3300032892	Soil	MFGFAITAIFVSYQLLTDLQGPIPRNSMLMLVLIILCPPSLLSTAIDTEVGTNGYYLLWAAIAVINAGLYATIRALILRRIKKAD
Ga0335084_100327933	3300033004	Soil	MSALGRRHFSAAMFGFAITAVFVSYQLLTDSQSSIQRDSAFMMVFVVLCPASLLSLAFDPEAGTTGFYVLWTVIAVVNAGLYATVRALLARGFQRLD
Ga0335084_110777952	3300033004	Soil	MSALDRRHFSTAMFGFAITAVFVSYQLLTDSQSPIQRDSAFMMVFVVLCPASLLSLVFDPEAGTTGFYILWTVIAVLNAGVYAIARGLLSRGFQRLH
Ga0326726_102293353	3300033433	Peat Soil	MLGFAITAIFVSYQMLTDSHSAIHRDAAYMVVFIVLCPPSLLSVALHTELGSNNFYFLWVVIGLLNGALYAAIRILVSRRLQRRH

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F054290

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences