NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F054288

Metagenome / Metatranscriptome Family F054288

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F054288
Family Type Metagenome / Metatranscriptome
Number of Sequences 140
Average Sequence Length 42 residues
Representative Sequence ELVLQAADKALYRAKANGRNRVETATSPRRRTRIKAAGIA
Number of Associated Samples 127
Number of Associated Scaffolds 140

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 100.00 %
% of genes from short scaffolds (< 2000 bps) 95.00 %
Associated GOLD sequencing projects 123
AlphaFold2 3D model prediction Yes
3D model pTM-score0.29

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (57.857 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(20.714 % of family members)
Environment Ontology (ENVO) Unclassified
(21.429 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(55.000 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 22.06%    β-sheet: 0.00%    Coil/Unstructured: 77.94%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.29
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 140 Family Scaffolds
PF00990GGDEF 5.00
PF03928HbpS-like 3.57
PF01568Molydop_binding 2.86
PF13180PDZ_2 2.14
PF07992Pyr_redox_2 2.14
PF13411MerR_1 2.14
PF00072Response_reg 1.43
PF14310Fn3-like 1.43
PF13365Trypsin_2 0.71
PF00218IGPS 0.71
PF05569Peptidase_M56 0.71
PF05336rhaM 0.71
PF12849PBP_like_2 0.71
PF00076RRM_1 0.71
PF13005zf-IS66 0.71
PF02371Transposase_20 0.71
PF02614UxaC 0.71
PF01243Putative_PNPOx 0.71
PF02538Hydantoinase_B 0.71
PF00703Glyco_hydro_2 0.71
PF00188CAP 0.71

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 140 Family Scaffolds
COG0146N-methylhydantoinase B/oxoprolinase/acetone carboxylase, alpha subunitAmino acid transport and metabolism [E] 1.43
COG0134Indole-3-glycerol phosphate synthaseAmino acid transport and metabolism [E] 0.71
COG1904Glucuronate isomeraseCarbohydrate transport and metabolism [G] 0.71
COG2340Spore germination protein YkwD and related proteins with CAP (CSP/antigen 5/PR1) domainCell cycle control, cell division, chromosome partitioning [D] 0.71
COG3250Beta-galactosidase/beta-glucuronidaseCarbohydrate transport and metabolism [G] 0.71
COG3254L-rhamnose mutarotaseCell wall/membrane/envelope biogenesis [M] 0.71
COG3547TransposaseMobilome: prophages, transposons [X] 0.71


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A57.86 %
All OrganismsrootAll Organisms42.14 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000364|INPhiseqgaiiFebDRAFT_101853859All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes1588Open in IMG/M
3300001661|JGI12053J15887_10419164Not Available642Open in IMG/M
3300002245|JGIcombinedJ26739_101078421All Organisms → cellular organisms → Bacteria690Open in IMG/M
3300002568|C688J35102_119448184All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium697Open in IMG/M
3300004091|Ga0062387_101798523Not Available500Open in IMG/M
3300004152|Ga0062386_100021628All Organisms → cellular organisms → Bacteria4706Open in IMG/M
3300004631|Ga0058899_10115878All Organisms → cellular organisms → Bacteria1032Open in IMG/M
3300004633|Ga0066395_10342455Not Available829Open in IMG/M
3300005176|Ga0066679_10761118All Organisms → cellular organisms → Bacteria → Proteobacteria → Acidithiobacillia → Acidithiobacillales → Thermithiobacillaceae → Thermithiobacillus → Thermithiobacillus tepidarius622Open in IMG/M
3300005186|Ga0066676_10590184All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium753Open in IMG/M
3300005537|Ga0070730_10404503All Organisms → cellular organisms → Bacteria → Proteobacteria883Open in IMG/M
3300005541|Ga0070733_10237399All Organisms → cellular organisms → Bacteria1197Open in IMG/M
3300005541|Ga0070733_10896684All Organisms → cellular organisms → Bacteria596Open in IMG/M
3300005542|Ga0070732_10856306Not Available555Open in IMG/M
3300005564|Ga0070664_100137058All Organisms → cellular organisms → Bacteria2153Open in IMG/M
3300005602|Ga0070762_10039411All Organisms → cellular organisms → Bacteria2565Open in IMG/M
3300005602|Ga0070762_10470148All Organisms → cellular organisms → Bacteria820Open in IMG/M
3300005712|Ga0070764_10371892All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium lusitanum839Open in IMG/M
3300005884|Ga0075291_1006619All Organisms → cellular organisms → Bacteria1252Open in IMG/M
3300006052|Ga0075029_100423074All Organisms → cellular organisms → Bacteria → Proteobacteria869Open in IMG/M
3300006052|Ga0075029_101306617Not Available509Open in IMG/M
3300006086|Ga0075019_10083764All Organisms → cellular organisms → Bacteria → Proteobacteria1819Open in IMG/M
3300006173|Ga0070716_100473631All Organisms → cellular organisms → Bacteria918Open in IMG/M
3300006174|Ga0075014_100482494Not Available691Open in IMG/M
3300006893|Ga0073928_10889133Not Available611Open in IMG/M
3300009521|Ga0116222_1029168All Organisms → cellular organisms → Bacteria → Acidobacteria2452Open in IMG/M
3300009522|Ga0116218_1082681Not Available1463Open in IMG/M
3300009523|Ga0116221_1156386All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium992Open in IMG/M
3300009636|Ga0116112_1085445Not Available896Open in IMG/M
3300009641|Ga0116120_1254543Not Available550Open in IMG/M
3300009764|Ga0116134_1099125Not Available1056Open in IMG/M
3300010159|Ga0099796_10396560Not Available604Open in IMG/M
3300010343|Ga0074044_10211613All Organisms → cellular organisms → Bacteria1286Open in IMG/M
3300011120|Ga0150983_15843080Not Available510Open in IMG/M
3300011270|Ga0137391_10779799All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium789Open in IMG/M
3300012212|Ga0150985_100844009Not Available530Open in IMG/M
3300012532|Ga0137373_10730355Not Available736Open in IMG/M
3300012923|Ga0137359_10872645Not Available777Open in IMG/M
3300012923|Ga0137359_11555455Not Available549Open in IMG/M
3300012944|Ga0137410_11291170All Organisms → cellular organisms → Bacteria631Open in IMG/M
3300012987|Ga0164307_10870398All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium722Open in IMG/M
3300014201|Ga0181537_10734552Not Available671Open in IMG/M
3300014501|Ga0182024_10042115All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae7468Open in IMG/M
3300014501|Ga0182024_11085835Not Available946Open in IMG/M
3300014838|Ga0182030_10268839All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Bryocella → Bryocella elongata1923Open in IMG/M
3300017822|Ga0187802_10282786Not Available645Open in IMG/M
3300017927|Ga0187824_10074304All Organisms → cellular organisms → Bacteria1071Open in IMG/M
3300017933|Ga0187801_10420011Not Available558Open in IMG/M
3300017937|Ga0187809_10318273Not Available577Open in IMG/M
3300017955|Ga0187817_10936479Not Available554Open in IMG/M
3300018009|Ga0187884_10306361Not Available642Open in IMG/M
3300018057|Ga0187858_10261445All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1107Open in IMG/M
3300018058|Ga0187766_11126680Not Available565Open in IMG/M
3300019268|Ga0181514_1499090Not Available807Open in IMG/M
3300019887|Ga0193729_1277453Not Available511Open in IMG/M
3300020579|Ga0210407_10359720Not Available1139Open in IMG/M
3300020582|Ga0210395_10503148Not Available912Open in IMG/M
3300020583|Ga0210401_11580034Not Available513Open in IMG/M
3300021171|Ga0210405_10239139All Organisms → cellular organisms → Bacteria1437Open in IMG/M
3300021180|Ga0210396_10459761All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1116Open in IMG/M
3300021402|Ga0210385_11231837Not Available574Open in IMG/M
3300021404|Ga0210389_10385741All Organisms → cellular organisms → Bacteria1101Open in IMG/M
3300021407|Ga0210383_11207480Not Available635Open in IMG/M
3300021474|Ga0210390_10051718All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis3377Open in IMG/M
3300021474|Ga0210390_11056480Not Available661Open in IMG/M
3300021474|Ga0210390_11505386Not Available532Open in IMG/M
3300021478|Ga0210402_12009326Not Available504Open in IMG/M
3300022502|Ga0242646_1026895All Organisms → cellular organisms → Eukaryota → Amoebozoa → Discosea → Longamoebia → Centramoebida → Acanthamoebidae → Acanthamoeba → Acanthamoeba polyphaga574Open in IMG/M
3300022502|Ga0242646_1036046Not Available524Open in IMG/M
3300022504|Ga0242642_1022347All Organisms → cellular organisms → Bacteria870Open in IMG/M
3300022505|Ga0242647_1017650All Organisms → cellular organisms → Bacteria → Acidobacteria694Open in IMG/M
3300022506|Ga0242648_1070611All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Agrobacterium → Agrobacterium rhizogenes567Open in IMG/M
3300022528|Ga0242669_1054174All Organisms → cellular organisms → Bacteria693Open in IMG/M
3300022532|Ga0242655_10027129All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_1_40CM_3_55_51279Open in IMG/M
3300022533|Ga0242662_10259208Not Available567Open in IMG/M
3300022714|Ga0242671_1090418Not Available569Open in IMG/M
3300022717|Ga0242661_1050332Not Available776Open in IMG/M
3300022717|Ga0242661_1142041Not Available533Open in IMG/M
3300022717|Ga0242661_1156338Not Available515Open in IMG/M
3300022732|Ga0224569_104115All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1115Open in IMG/M
3300022733|Ga0224562_1010850Not Available724Open in IMG/M
3300022840|Ga0224549_1019199Not Available949Open in IMG/M
3300023056|Ga0233357_1025451Not Available717Open in IMG/M
3300023672|Ga0247553_102402All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium864Open in IMG/M
3300025477|Ga0208192_1075070Not Available631Open in IMG/M
3300025916|Ga0207663_10072437All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis2227Open in IMG/M
3300026294|Ga0209839_10039886Not Available1740Open in IMG/M
3300027565|Ga0209219_1042087Not Available1138Open in IMG/M
3300027575|Ga0209525_1040255All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Agrobacterium → Agrobacterium rhizogenes1148Open in IMG/M
3300027576|Ga0209003_1045930Not Available771Open in IMG/M
3300027576|Ga0209003_1061100Not Available682Open in IMG/M
3300027591|Ga0209733_1029366All Organisms → cellular organisms → Bacteria → Acidobacteria1481Open in IMG/M
3300027635|Ga0209625_1070100Not Available784Open in IMG/M
3300027696|Ga0208696_1198818Not Available635Open in IMG/M
3300027867|Ga0209167_10068199All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1774Open in IMG/M
3300027867|Ga0209167_10776750Not Available522Open in IMG/M
3300027884|Ga0209275_10904722Not Available509Open in IMG/M
3300027889|Ga0209380_10692073Not Available585Open in IMG/M
3300027895|Ga0209624_10664670Not Available689Open in IMG/M
3300027898|Ga0209067_10067398Not Available1832Open in IMG/M
3300027908|Ga0209006_11466209Not Available518Open in IMG/M
3300027911|Ga0209698_10953564Not Available641Open in IMG/M
3300028016|Ga0265354_1011340Not Available848Open in IMG/M
3300028565|Ga0302145_10234918Not Available610Open in IMG/M
3300028766|Ga0302269_1185492Not Available588Open in IMG/M
3300028780|Ga0302225_10467281Not Available590Open in IMG/M
3300028806|Ga0302221_10421848Not Available581Open in IMG/M
3300028906|Ga0308309_11609201Not Available553Open in IMG/M
3300029916|Ga0302148_1086834All Organisms → cellular organisms → Bacteria889Open in IMG/M
3300029919|Ga0302141_1019779All Organisms → cellular organisms → Bacteria1850Open in IMG/M
3300029939|Ga0311328_10210109All Organisms → cellular organisms → Bacteria1498Open in IMG/M
3300030051|Ga0302195_10401876Not Available593Open in IMG/M
3300030054|Ga0302182_10398060Not Available576Open in IMG/M
3300030507|Ga0302192_10337942Not Available623Open in IMG/M
3300030520|Ga0311372_12550036All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium572Open in IMG/M
3300030528|Ga0210277_10341185All Organisms → cellular organisms → Eukaryota1152Open in IMG/M
3300030598|Ga0210287_1244241Not Available510Open in IMG/M
3300030677|Ga0302317_10425295Not Available584Open in IMG/M
3300030738|Ga0265462_12307750Not Available532Open in IMG/M
3300030813|Ga0265750_1074583Not Available555Open in IMG/M
3300030815|Ga0265746_1010760Not Available1017Open in IMG/M
3300030836|Ga0265767_112041All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium593Open in IMG/M
3300030862|Ga0265753_1137031All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium522Open in IMG/M
3300030874|Ga0265742_1011529All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium681Open in IMG/M
3300030878|Ga0265770_1085785All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium622Open in IMG/M
3300030880|Ga0265776_110095Not Available556Open in IMG/M
3300030940|Ga0265740_1018307Not Available703Open in IMG/M
3300031028|Ga0302180_10099433All Organisms → cellular organisms → Bacteria → Acidobacteria1668Open in IMG/M
3300031028|Ga0302180_10243832All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium947Open in IMG/M
3300031057|Ga0170834_102703372Not Available557Open in IMG/M
3300031128|Ga0170823_15167666Not Available633Open in IMG/M
3300031231|Ga0170824_116507757Not Available501Open in IMG/M
3300031232|Ga0302323_102976365Not Available541Open in IMG/M
3300031238|Ga0265332_10394874All Organisms → cellular organisms → Bacteria → Acidobacteria571Open in IMG/M
3300031715|Ga0307476_10820274Not Available687Open in IMG/M
3300031821|Ga0318567_10386020All Organisms → cellular organisms → Bacteria793Open in IMG/M
3300031823|Ga0307478_10947899Not Available720Open in IMG/M
3300032895|Ga0335074_11258827Not Available616Open in IMG/M
3300033158|Ga0335077_10494465All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1295Open in IMG/M
3300033475|Ga0310811_10412890All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1469Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil20.71%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil9.29%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil8.57%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa5.00%
BogEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Bog5.00%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds4.29%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil4.29%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil4.29%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil4.29%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment3.57%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland2.86%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil2.86%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland2.14%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil2.14%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil2.14%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil1.43%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil1.43%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil1.43%
PermafrostEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost1.43%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere1.43%
RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere1.43%
BogEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog0.71%
Iron-Sulfur Acid SpringEnvironmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring0.71%
Rice Paddy SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil0.71%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland0.71%
Bog Forest SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil0.71%
BogEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Bog0.71%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Soil0.71%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.71%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil0.71%
SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Soil0.71%
FenEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Fen0.71%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere0.71%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere0.71%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere0.71%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000364Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300001661Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)EnvironmentalOpen in IMG/M
3300002245Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)EnvironmentalOpen in IMG/M
3300002568Grasslands soil microbial communities from Hopland, California, USA - 2EnvironmentalOpen in IMG/M
3300004091Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3EnvironmentalOpen in IMG/M
3300004152Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3EnvironmentalOpen in IMG/M
3300004631Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF234 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004633Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBioEnvironmentalOpen in IMG/M
3300005176Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128EnvironmentalOpen in IMG/M
3300005186Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125EnvironmentalOpen in IMG/M
3300005537Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1EnvironmentalOpen in IMG/M
3300005541Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1EnvironmentalOpen in IMG/M
3300005542Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1EnvironmentalOpen in IMG/M
3300005564Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaGHost-AssociatedOpen in IMG/M
3300005602Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2EnvironmentalOpen in IMG/M
3300005712Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4EnvironmentalOpen in IMG/M
3300005884Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_302EnvironmentalOpen in IMG/M
3300006052Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013EnvironmentalOpen in IMG/M
3300006086Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013EnvironmentalOpen in IMG/M
3300006173Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaGEnvironmentalOpen in IMG/M
3300006174Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014EnvironmentalOpen in IMG/M
3300006893Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaGEnvironmentalOpen in IMG/M
3300009521Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaGEnvironmentalOpen in IMG/M
3300009522Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaGEnvironmentalOpen in IMG/M
3300009523Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaGEnvironmentalOpen in IMG/M
3300009636Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_150EnvironmentalOpen in IMG/M
3300009641Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_150EnvironmentalOpen in IMG/M
3300009764Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_40EnvironmentalOpen in IMG/M
3300010159Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3EnvironmentalOpen in IMG/M
3300010343Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1EnvironmentalOpen in IMG/M
3300011120Combined assembly of Microbial Forest Soil metaTEnvironmentalOpen in IMG/M
3300011270Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaGEnvironmentalOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012532Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012923Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaGEnvironmentalOpen in IMG/M
3300012944Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012987Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MGEnvironmentalOpen in IMG/M
3300014201Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaGEnvironmentalOpen in IMG/M
3300014501Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300014838Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300017822Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2EnvironmentalOpen in IMG/M
3300017927Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_4EnvironmentalOpen in IMG/M
3300017933Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1EnvironmentalOpen in IMG/M
3300017937Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_4EnvironmentalOpen in IMG/M
3300017955Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2EnvironmentalOpen in IMG/M
3300018009Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_40EnvironmentalOpen in IMG/M
3300018057Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150EnvironmentalOpen in IMG/M
3300018058Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MGEnvironmentalOpen in IMG/M
3300019268Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019887Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2EnvironmentalOpen in IMG/M
3300020579Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-MEnvironmentalOpen in IMG/M
3300020582Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-OEnvironmentalOpen in IMG/M
3300020583Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-MEnvironmentalOpen in IMG/M
3300021171Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-MEnvironmentalOpen in IMG/M
3300021180Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-OEnvironmentalOpen in IMG/M
3300021402Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-OEnvironmentalOpen in IMG/M
3300021404Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-OEnvironmentalOpen in IMG/M
3300021407Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-OEnvironmentalOpen in IMG/M
3300021474Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-OEnvironmentalOpen in IMG/M
3300021478Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-MEnvironmentalOpen in IMG/M
3300022502Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-19-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022504Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-2-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022505Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-12-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022506Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-26-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022528Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022532Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022533Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022714Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022717Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-11-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022732Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZU1Host-AssociatedOpen in IMG/M
3300022733Soil microbial communities from Bohemian Forest, Czech Republic ? CSU3EnvironmentalOpen in IMG/M
3300022840Peat soil microbial communities from Stordalen Mire, Sweden - 717 P3 1-5EnvironmentalOpen in IMG/M
3300023056Soil microbial communities from Shasta-Trinity National Forest, California, United States - GEON-SFM-MS2EnvironmentalOpen in IMG/M
3300023672Metatranscriptome of spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZE5 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300025477Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_150 (SPAdes)EnvironmentalOpen in IMG/M
3300025916Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026294Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050 (SPAdes)EnvironmentalOpen in IMG/M
3300027565Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027575Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O1 (SPAdes)EnvironmentalOpen in IMG/M
3300027576Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027591Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027635Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027696Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027867Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027884Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)EnvironmentalOpen in IMG/M
3300027889Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)EnvironmentalOpen in IMG/M
3300027895Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)EnvironmentalOpen in IMG/M
3300027898Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)EnvironmentalOpen in IMG/M
3300027908Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)EnvironmentalOpen in IMG/M
3300027911Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)EnvironmentalOpen in IMG/M
3300028016Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1Host-AssociatedOpen in IMG/M
3300028565Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E2_3EnvironmentalOpen in IMG/M
3300028766Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E2_2EnvironmentalOpen in IMG/M
3300028780Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_2EnvironmentalOpen in IMG/M
3300028806Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_1EnvironmentalOpen in IMG/M
3300028906Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)EnvironmentalOpen in IMG/M
3300029916Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E3_1EnvironmentalOpen in IMG/M
3300029919Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E1_2EnvironmentalOpen in IMG/M
3300029939I_Bog_E3 coassemblyEnvironmentalOpen in IMG/M
3300030051Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N1_2EnvironmentalOpen in IMG/M
3300030054Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_1EnvironmentalOpen in IMG/M
3300030507Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E3_2EnvironmentalOpen in IMG/M
3300030520III_Palsa_N2 coassemblyEnvironmentalOpen in IMG/M
3300030528Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO135-VCO084SO (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030598Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO747-VDE048SO (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030677Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N3_3EnvironmentalOpen in IMG/M
3300030738Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada VDE Co-assemblyEnvironmentalOpen in IMG/M
3300030813Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSE1 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030815Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSU2 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030836Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZU4 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030862Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSE5 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030874Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSI4 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030878Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030880Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZA2 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030940Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSI1 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031028Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_2EnvironmentalOpen in IMG/M
3300031057Oak Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031128Oak Summer Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031232Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_3EnvironmentalOpen in IMG/M
3300031238Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaGHost-AssociatedOpen in IMG/M
3300031715Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05EnvironmentalOpen in IMG/M
3300031821Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20EnvironmentalOpen in IMG/M
3300031823Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05EnvironmentalOpen in IMG/M
3300032895Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3EnvironmentalOpen in IMG/M
3300033158Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1EnvironmentalOpen in IMG/M
3300033475Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YCEnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
INPhiseqgaiiFebDRAFT_10185385913300000364SoilTAATERSSPETVLESADKALYRAKANGRNRVETATSAPRRMRTKTAGIA*
JGI12053J15887_1041916423300001661Forest SoilPDVEEVVQAADKALYRAKAAGRNRVESAVSPRRRVRAQTAGIA*
JGIcombinedJ26739_10107842113300002245Forest SoilQAADKALYRAKSAGRNRIETEAAPRRAVRTRAAGIA*
C688J35102_11944818413300002568SoilSDPDAVLQAADKALYRAKANGRNRVETATPPRKAGAKAAGIA*
Ga0062387_10179852313300004091Bog Forest SoilSAREDSDPELVLQAADKALYRAKANGRNRVETATAPRRRTRIKAVGIA*
Ga0062386_10002162833300004152Bog Forest SoilASSSNEGLSTDEVVQAADKALYRAKAGGRNRIETASSPRRRSRSKAAGG*
Ga0058899_1011587833300004631Forest SoilNPSAEEVVRAADKALYRAKAAGRNRVESASAPRRRVRSKAAGIA*
Ga0066395_1034245513300004633Tropical Forest SoilDTESVLKAADKALYRAKENGRNRVETTSPVRRTRSKTAGIA*
Ga0066679_1076111813300005176SoilEEVIQAADKALYRAKAGGRNRIETASAPRRRMRAKSAGIA*
Ga0066676_1059018423300005186SoilPHSVLQAADKALYRAKANGRNRVETAAITRKAGAKTAGIA*
Ga0070730_1040450313300005537Surface SoilDHVLQAADKALYRAKENGRNRVEIASSTRRKTRVKAAGIA*
Ga0070733_1023739913300005541Surface SoilVASSFPEKSNPDFVLQAADKALYRAKANGRNRLEASPASRQREDRGKAAGIA*
Ga0070733_1089668423300005541Surface SoilEEVIQAADKALYRAKAGGRNRVETGGAARRRRSRGKAADIA*
Ga0070732_1085630623300005542Surface SoilANPEQVLQAADKALYRAKANGRNRVETAASVRRRPRVKAAGIA*
Ga0070664_10013705843300005564Corn RhizospherePDAVLQAADKALYRAKANGRNRVETATPPRKAGAKAAGIA*
Ga0070762_1003941143300005602SoilSDDTRPEDVIESADKALYRAKANGRNRVELAPSPRQPNRAKAAGIA*
Ga0070762_1047014833300005602SoilDAVPEAVIQAADKALYRAKSAGRNRIETETAPRRAVRTRAAGIA*
Ga0070764_1037189213300005712SoilEHVLQAADKALYRAKANGRNRVETASAARKRPRVKAAGIA*
Ga0075291_100661943300005884Rice Paddy SoilGKRRSDPQAVLQAADKALYRAKANGRNRVESSSTPRKTGAKAAGIA*
Ga0075029_10042307413300006052WatershedsADKALYRAKANGRNRVEISISARRRSRVKAEGIA*
Ga0075029_10130661723300006052WatershedsLHPDGVLEAADKALYRAKDNGRNRVETAASARRRRAKAAGIA*
Ga0075019_1008376433300006086WatershedsVLRAADQALYRAKGAGRNRVETASSLDRRTRTASIA*
Ga0070716_10047363133300006173Corn, Switchgrass And Miscanthus RhizosphereTSHESSDTESVVKSADKALYRAKEAGRNRVETASPVRRVRSKTAGIA*
Ga0075014_10048249413300006174WatershedsKQKPSPELVLQSADKALYRAKANGRNRVETATAGRRSRVKAAGIA*
Ga0073928_1088913313300006893Iron-Sulfur Acid SpringIQAADKALYRAKAAGRNRVETAAAPHRRTRTKAAGIA*
Ga0116222_102916813300009521Peatlands SoilGEDTTESIVQAADRALYRAKAAGRNRVESDALSRRRSRAKAVGIA*
Ga0116218_108268113300009522Peatlands SoilELVLQAADKALYRAKANGRNRVETATSPRRRTRIKAAGIA*
Ga0116221_115638633300009523Peatlands SoilAADKALYRAKANGRNRIETAAPARRRRVKAAGIA*
Ga0116112_108544513300009636PeatlandADKALYRAKAAGRNRVEIASSARRRTRSKAAGIA*
Ga0116120_125454313300009641PeatlandADEVIQAADKALYRAKAAGRNRVEIASSARRRTRSKAAGIA*
Ga0116134_109912513300009764PeatlandQAADKALYRAKAAGRNRVEIASSARRRTRSKAAGIA*
Ga0099796_1039656023300010159Vadose Zone SoilEEVIQAADQALYRAKAAGRNRIETASAPRRRIRAKSAGIA*
Ga0074044_1021161313300010343Bog Forest SoilATSSKEALRPEAVLQAADQALYRAKGNGRNRVETASSTRRKTRVKAGIA*
Ga0150983_1584308023300011120Forest SoilVATSRRENPSAEEVVQAADKALYRAKGAGRNRVETAAGPKRRVRTKAAGIA*
Ga0137391_1077979913300011270Vadose Zone SoilKPAAEEVMQAADKALYRAKAVGRNRIETAAPKRKVRTKAAGIA*
Ga0150985_10084400913300012212Avena Fatua RhizospherePSMREGHEADQVIRAADKAPYRAKAAGRNRVETTAPPRRGARDKSA*
Ga0137373_1073035513300012532Vadose Zone SoilPDVVLHAADKALYRAKAGGRNRVETASVARRRSRVKAAGIA*
Ga0137359_1087264513300012923Vadose Zone SoilAKEGSEPDLVLQAADKALYRAKANGRNRVETASVPRRRSRVKAAGIA*
Ga0137359_1155545513300012923Vadose Zone SoilADKALYRAKAAGRNRVETAISPRRRVRAQTAGIA*
Ga0137410_1129117013300012944Vadose Zone SoilTDLVLQAADKALYRAKDNGRNRVETASAKRGRAKTVEIA*
Ga0164307_1087039813300012987SoilVLQAADKALYRAKANGRNRVETATPPRKAGAKAAGIA*
Ga0181537_1073455213300014201BogTAEEVLQAADKALYRAKAAGRNRIETAESPRRRTRSKAAGIA*
Ga0182024_1004211583300014501PermafrostSSPDDVVKAADKALYRAKDGGRNRVETALAGRRARSKTSGIA*
Ga0182024_1108583513300014501PermafrostNSNPDSVLEAADKALYRAKDNGRNRVETAPARRRSRARAAGIA*
Ga0182030_1026883933300014838BogQAADQALYRAKGNGRNRVETASSTRRKTRVKAGIA*
Ga0187802_1028278623300017822Freshwater SedimentVVLKAADKALYRAKANGRNRLETASPVRGARVKTAGIA
Ga0187824_1007430413300017927Freshwater SedimentEMVLQDADKALYRAKENGRNRLETTATTRRTGTRLNAARA
Ga0187801_1042001123300017933Freshwater SedimentVQSADKALYRAKAGGRNRIETATSARRRRTRAKAAGSA
Ga0187809_1031827313300017937Freshwater SedimentAPEETVQAADKALYRAKAAGRNRVETASAFPSRRPRAKAAGIA
Ga0187817_1093647913300017955Freshwater SedimentAADKALYRAKANGRNRVEPASSTRRKTRVKAAGIA
Ga0187884_1030636123300018009PeatlandAADKALYRAKSNGRNRVETASVARRRSREKAAGIA
Ga0187858_1026144513300018057PeatlandLQAADKALYRAKANGRNRVETASSANRRTRIKAAGIA
Ga0187766_1112668023300018058Tropical PeatlandTSGKEPSDPDLVLQAADKALYRAKANGRNRLETASSVRSGRAKTAGIA
Ga0181514_149909013300019268PeatlandANPSAEDVIQAADRALYRAKAGGRNRIETASASRRRNKAAGIA
Ga0193729_127745313300019887SoilEEVILAADKALYRAKAAGRNRIETASPPRRQVRMKSAGIA
Ga0210407_1035972013300020579SoilGESDPERVLQAADKALYRAKANGRNRVETASSVRLRTRVKTAVIA
Ga0210395_1050314813300020582SoilLQAADKALYRAKANGRNRVETASAARKRPRVKAAGIA
Ga0210401_1158003413300020583SoilKGENPSAEEVVRAADKALYRAKAAGRNRVESASAPRRRVRSKAAGIA
Ga0210405_1023913943300021171SoilSAEEVIQAADRALYRAKAAGRNRIETASASRRRVRSKAAGIA
Ga0210396_1045976113300021180SoilSAEEVIQAADKALYRAKAAGRNRIETASAPRRRSRAKSAGIA
Ga0210385_1123183713300021402SoilDSMAKDVIKAADEALYRAKEGGRNRIETSSGRRRRARTKSAGIA
Ga0210389_1038574123300021404SoilPEDVIESADKALYRAKANGRNRVELAPSPRQPNRAKAAGIA
Ga0210383_1120748013300021407SoilQAADKALYRAKAAGRNRVETANAPRRRARGKAAAGIA
Ga0210390_1005171813300021474SoilMDAADKALYRAKGNGRNRVETESAPRRRARVKTAGIA
Ga0210390_1105648023300021474SoilVATSADEESDPALVLQAADKALYRAKANGRNRVETAASPRRRTRAKTAGIA
Ga0210390_1150538613300021474SoilVVLEAADKALYRAKNNGRNRVETAASVRRRSSAKTAGIA
Ga0210402_1200932613300021478SoilDLVLQAADKALYRAKANGRNRVETTSAVRRGRTKAVGIA
Ga0242646_102689513300022502SoilAKQEIDPEAVLQAADKALYRAKANGRNRLETAAVPRRRSRFKEAGIA
Ga0242646_103604613300022502SoilVVKAADKALYRAKAAGRNRVETASSSRHPARSKSAVTA
Ga0242642_102234723300022504SoilAKEESDPELVLQAADKALYRAKANGRNRLETATSPRRRTRIKAAGIA
Ga0242647_101765023300022505SoilAVLQAADKALYRAKANGRNRVETAGSSRRKARVEAGIA
Ga0242648_107061113300022506SoilSDPEHVLQAADKALYRAKANGRNRVETASAARKRPRVKAAGIA
Ga0242669_105417423300022528SoilVATASKKELYPDAVLQAADKALYRAKANGRNRVETAGSSRRKARVEAGIA
Ga0242655_1002712933300022532SoilKEVIQAADKALYRAKAGGRNRVETTSASRRRVRAKSAGIA
Ga0242662_1025920813300022533SoilATSTKEKPDADLVLQAADKALYRAKANGRNRVETTSAVRRGRTKAVGIA
Ga0242671_109041813300022714SoilVLQAADKALYRAKANGRNRVETATGPRRRTRAKTAGIA
Ga0242661_105033213300022717SoilPALVLQAADKALYRAKANGRNRVETAASPRRRTRAKTAGIA
Ga0242661_114204123300022717SoilSDPEDVLQAADKALYRAKGNGRNRVETASSARRRTRVKTAGIA
Ga0242661_115633813300022717SoilNQSVEDVIQAADKALYRAKAAGRNRIETAAPGRRRVRNKTAGIA
Ga0224569_10411523300022732RhizospherePNRIMEAADKALYRAKGNGRNRVETESAPRRRARVKTAGIA
Ga0224562_101085013300022733SoilKAADKALYRAKAAGRNRIETAASRRRGVRTKAADIA
Ga0224549_101919933300022840SoilSAEEVIQAADKALYRAKAGGRNRIETAASPRRRTRSKAAGIA
Ga0233357_102545113300023056SoilAADKALYRAKANGRNRVETASAGRRRPRVKTVEIA
Ga0247553_10240213300023672SoilPDPNRIMEAADKALYRAKGNGRNRVETESAPRRRARVKTAGIA
Ga0208192_107507013300025477PeatlandASADEVIQAADKALYRAKAAGRNRVEIASSARRRTRSKAAGIA
Ga0207663_1007243733300025916Corn, Switchgrass And Miscanthus RhizosphereDAVLQAADKALYRAKANGRNRVETATPPRKAGAKAAGIA
Ga0209839_1003988613300026294SoilTTEKQTVEADLVLQAADKALYRAKANGRNRVETATSSRRRIRVKAAGIA
Ga0209219_104208713300027565Forest SoilEVIQAADKALYRAKAAGRNRIETASAARRRVSSKAAGIA
Ga0209525_104025513300027575Forest SoilAKEESDPEHVLQAADKALYRAKANGRNRVETASAARKRPRVKAAGIA
Ga0209003_104593013300027576Forest SoilLVLKAADKALYRAKANGRNRVETASAKRTRTKAAGIAG
Ga0209003_106110013300027576Forest SoilGPETVLESADKALYRAKANGRNRVEAATSSARRTRTRAAGIA
Ga0209733_102936633300027591Forest SoilPAEVLEAADKALYRAKANGRNRVETASSPRRRTRVKTAGIA
Ga0209625_107010023300027635Forest SoilGVATSATSVRAASDPAEVLEAADKALYRAKANGRNRVETASSSRRRTRVKTAGIA
Ga0208696_119881813300027696Peatlands SoilTSSKQELPAEEVLQAADKALYRAKANGRNRVETASSPRRKTRVAAGIA
Ga0209167_1006819913300027867Surface SoilESAEDVVKAADKALYRAKEGGRNRVETATSGRRRARSKAATA
Ga0209167_1077675013300027867Surface SoilSDPDRVLQAADKALYRAKANGRNRVETASAPRRRNRVKAAGIA
Ga0209275_1090472213300027884SoilDAVPEAVIQAADKALYRAKSAGRNRIETETAPRRAVRTRAAGIA
Ga0209380_1069207313300027889SoilDVIESADKALYRAKANGRNRVELAPSPRQPNRAKAAGIA
Ga0209624_1066467023300027895Forest SoilIQAADKALYRAKSAGRNRIETEAAPRRAVRARAAGIA
Ga0209067_1006739823300027898WatershedsDPDAVLRAADQALYRAKGAGRNRVETASSLDRRTRTASIA
Ga0209006_1146620913300027908Forest SoilPQQPHADLVLQAADKALYRAKENGRNRLETATAARRSRTKTAGIA
Ga0209698_1095356413300027911WatershedsKQTVQTDSVLQAADKALYRAKANGRNRVEISISARRRSRVKAEGIA
Ga0265354_101134013300028016RhizosphereGRENPSAEEVVQAADKALYRAKASGRNRIETASASRRRVRSKAAGIA
Ga0302145_1023491823300028565BogTAKGENPSADDVVQAADKALYRAKAGGRNRVETAAAPGRRARGKTAGIA
Ga0302269_118549213300028766BogSAEEVTQAADKALYRAKAAGRNRIETAASPRRRTRSKAAGIA
Ga0302225_1046728113300028780PalsaAEEVLQAADKALYRAKAAGRNRIEIASAPRRRTRTKAAGIA
Ga0302221_1042184813300028806PalsaVIQAADKALYRAKAAGRNRIETASAPGRRTRTKAAGIA
Ga0308309_1160920113300028906SoilADAAAEAVIEAADRALYRAKSAGRNRVETESAPRRPVRARAAGIA
Ga0302148_108683423300029916BogRNATAEEVIQAADKALYRAKAGGRNRIETESSSRRRVRSKAASTA
Ga0302141_101977943300029919BogTRENPSSEEVIKAADKALYRAKDGGRNRIETASTPRRKARSKTAGIA
Ga0311328_1021010933300029939BogTSRQEDSSAEEVTQAADKALYRAKAAGRNRIETAASPRRRTRSKAAGIA
Ga0302195_1040187613300030051BogCSAEQIVQAADKALYRAKAAGRNRIETASSPRRRVRTKTAGIA
Ga0302182_1039806013300030054PalsaPSAEEVIQAADKALYRAKAAGRNRIETASAPGRRTRTKAAGIA
Ga0302192_1033794213300030507BogEVTQAADKALYRAKAAGRNRIETAASPRRRTRSKAAGIA
Ga0311372_1255003623300030520PalsaSTEENPDPNRIMDAADKALYRAKGNGRNRVETASAPRRRARVKTAGIA
Ga0210277_1034118513300030528SoilLQAADKALYRAKANGRNRVETASVPRRRTRVKAAGIA
Ga0210287_124424113300030598SoilSRENSSADEVIQAADKALYRAKAGGRNRIETASSPRRRGRSKAVGTG
Ga0302317_1042529513300030677PalsaAADKALYRAKEGGRNRVETATAGRRRARSKAAATA
Ga0265462_1230775013300030738SoilTTSAEEVIQAADKALYRAKAAGRNRIETTFAPGRRARATTANSA
Ga0265750_107458323300030813SoilAADKALYCAKDNGRNRIETAGSIRRKSRVKAAGIA
Ga0265746_101076023300030815SoilAVIQAADKALYRAKSAGRNRIETEAAPRRAVRTRAAGIA
Ga0265767_11204113300030836SoilVDDVIQAADKALYRAKAAGRNRIETAAPGRRRVRNKTAGIA
Ga0265753_113703113300030862SoilEKPDPTQIMDAADKALYRAKGNGRNRVETASAPRRRVRAKTAGIA
Ga0265742_101152913300030874SoilEHVLQAADKALYRAKANGRNRVETASAARKRPRVKAAGIA
Ga0265770_108578513300030878SoilAAATQEKPDPTQIMDAADKALYRAKGNGRNRVETASAPRRRVRAKTAGIA
Ga0265776_11009523300030880SoilLVLQAADKALYRAKANGRNRVETAVSRRGRMKKTEIA
Ga0265740_101830713300030940SoilEKSSTDEVVQAADKALYRAKAGGRNRVETAGAARRRRAKAAVTA
Ga0302180_1009943363300031028PalsaNDSAEEIIEAADKALYRAKSAGRNRVETVSSPRRRTRSKAASIA
Ga0302180_1024383223300031028PalsaEKADPNRIMDAADKALYRAKGNGRNRVETASAPRRRARVRTAGIA
Ga0170834_10270337213300031057Forest SoilATSAKDGMDLELVLEAADKALYRAKANGRNRLETASIPARRSRVKTAGIA
Ga0170823_1516766613300031128Forest SoilDLVLQAADKALYRAKANGRNRVETAAPRRRGRVKAAGIA
Ga0170824_11650775723300031231Forest SoilVLHAADKALYRAKAGGRNRVETASVPRRRGRVKAAGIA
Ga0302323_10297636513300031232FenPDRVVQAADKALYRAKASGRNRVETAAASRRKPRVKAAGIA
Ga0265332_1039487413300031238RhizosphereEESDPDRVLQAADKALYRAKENGRNRVEIAASPRRKTRVKAAGIA
Ga0307476_1082027413300031715Hardwood Forest SoilTSRRDNPSAKEVIEAADKALYRAKAAGRNRIETASAPRRRVRAKSADIA
Ga0318567_1038602013300031821SoilSTEESNPDAIVKAADKALYRAKEGGRNRVEVTPSPKRTRMKAAGIA
Ga0307478_1094789923300031823Hardwood Forest SoilKEKSDPEDVLQAADKALYRAKGNGRNRVETASSARRRTRVKTAGIA
Ga0335074_1125882713300032895SoilQAADKALYRAKGAGRNRVETASAPRGRLRTTTAGIA
Ga0335077_1049446513300033158SoilTTEPSDPDRILQAADKALYRAKANGRNRLEVASSTRGPRVKAAGIA
Ga0310811_1041289013300033475SoilQAADKALYRAKANGRNRVETATPPRKAGAKAAGIA


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.