Metagenome / Metatranscriptome Family F054272

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F054272
Family Type	Metagenome / Metatranscriptome
Number of Sequences	140
Average Sequence Length	58 residues
Representative Sequence	VVEAGLVVSVVVGGLVAAGLAAGSVVSVFCSHAARSAAPARMQMYFFIVLIGRGILL
Number of Associated Samples	122
Number of Associated Scaffolds	140

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	40.00 %
% of genes near scaffold ends (potentially truncated)	37.14 %
% of genes from short scaffolds (< 2000 bps)	74.29 %
Associated GOLD sequencing projects	114
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.36

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (73.571 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (22.857 % of family members)
Environment Ontology (ENVO)	Unclassified (42.143 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (40.714 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 58.82% β-sheet: 0.00% Coil/Unstructured: 41.18%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.36
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.36
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 140 Family Scaffolds
PF01262	AlaDh_PNT_C	34.29
PF05222	AlaDh_PNT_N	15.71
PF00825	Ribonuclease_P	12.86
PF14849	YidC_periplas	4.29
PF02622	DUF179	3.57
PF01809	YidD	2.14
PF14014	DUF4230	2.14
PF14579	HHH_6	1.43
PF02585	PIG-L	0.71
PF01266	DAO	0.71

COG ID	Name	Functional Category	% Frequency in 140 Family Scaffolds
COG0594	RNase P protein component	Translation, ribosomal structure and biogenesis [J]	12.86
COG1678	Putative transcriptional regulator, AlgH/UPF0301 family	Transcription [K]	3.57
COG0759	Membrane-anchored protein YidD, putatitve component of membrane protein insertase Oxa1/YidC/SpoIIIJ	Cell wall/membrane/envelope biogenesis [M]	2.14
COG2120	N-acetylglucosaminyl deacetylase, LmbE family	Carbohydrate transport and metabolism [G]	0.71

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	73.57 %
Unclassified	root	N/A	26.43 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	73.57 %
Unclassified	root	N/A	26.43 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	73.57 %
Unclassified	root	N/A	26.43 %

Name	Rank	Taxonomy	Distribution
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	64.29 %
Unclassified	root	N/A	26.43 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.71 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	64.29 %
Unclassified	root	N/A	26.43 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.71 %

Name	Rank	Taxonomy	Distribution
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	41.43 %
Unclassified	root	N/A	26.43 %
Spartobacteria	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	13.57 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	0.71 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.71 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	41.43 %
Unclassified	root	N/A	26.43 %
Chthoniobacterales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales	12.86 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	0.71 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.71 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	41.43 %
Unclassified	root	N/A	26.43 %
Chthoniobacteraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	12.86 %
Verrucomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae	0.71 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.71 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	41.43 %
Unclassified	root	N/A	26.43 %
Candidatus Udaeobacter	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	10.71 %
Verrucomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae	0.71 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.71 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	41.43 %
Unclassified	root	N/A	26.43 %
Candidatus Udaeobacter copiosus	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	9.29 %
Verrucomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae	0.71 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.71 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2065487018\|GPINP_F5MS3JC02JSUMI	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	523	Open in IMG/M
2166559005\|cont_contig17778	Not Available	1298	Open in IMG/M
2170459005\|F1BAP7Q01B7C05	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	527	Open in IMG/M
2170459010\|GIO7OMY02IEGNI	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	506	Open in IMG/M
3300000709\|KanNP_Total_F14TBDRAFT_1004190	Not Available	982	Open in IMG/M
3300004156\|Ga0062589_102883135	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	502	Open in IMG/M
3300005166\|Ga0066674_10115451	Not Available	1253	Open in IMG/M
3300005167\|Ga0066672_10090896	All Organisms → cellular organisms → Bacteria	1845	Open in IMG/M
3300005171\|Ga0066677_10037335	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2365	Open in IMG/M
3300005172\|Ga0066683_10002910	All Organisms → cellular organisms → Bacteria	7665	Open in IMG/M
3300005172\|Ga0066683_10081970	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1944	Open in IMG/M
3300005172\|Ga0066683_10534559	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	715	Open in IMG/M
3300005174\|Ga0066680_10003928	All Organisms → cellular organisms → Bacteria	6895	Open in IMG/M
3300005178\|Ga0066688_10487437	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	795	Open in IMG/M
3300005179\|Ga0066684_10920239	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	569	Open in IMG/M
3300005186\|Ga0066676_10551610	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	781	Open in IMG/M
3300005186\|Ga0066676_10578563	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	761	Open in IMG/M
3300005187\|Ga0066675_10160852	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1549	Open in IMG/M
3300005289\|Ga0065704_10023619	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1680	Open in IMG/M
3300005354\|Ga0070675_101130725	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	720	Open in IMG/M
3300005367\|Ga0070667_100388259	All Organisms → cellular organisms → Bacteria	1269	Open in IMG/M
3300005434\|Ga0070709_11118477	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	631	Open in IMG/M
3300005435\|Ga0070714_100126583	All Organisms → cellular organisms → Bacteria	2278	Open in IMG/M
3300005437\|Ga0070710_10032690	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2820	Open in IMG/M
3300005454\|Ga0066687_10710850	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	597	Open in IMG/M
3300005456\|Ga0070678_101157486	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	716	Open in IMG/M
3300005471\|Ga0070698_101130077	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	732	Open in IMG/M
3300005518\|Ga0070699_100226216	All Organisms → cellular organisms → Bacteria	1668	Open in IMG/M
3300005540\|Ga0066697_10112591	Not Available	1591	Open in IMG/M
3300005548\|Ga0070665_101567538	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	667	Open in IMG/M
3300005981\|Ga0081538_10038029	All Organisms → cellular organisms → Bacteria	3111	Open in IMG/M
3300006028\|Ga0070717_10024187	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae	4819	Open in IMG/M
3300006032\|Ga0066696_10232532	All Organisms → cellular organisms → Bacteria	1187	Open in IMG/M
3300006046\|Ga0066652_100811692	Not Available	894	Open in IMG/M
3300006173\|Ga0070716_101062531	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	644	Open in IMG/M
3300006796\|Ga0066665_10533396	Not Available	957	Open in IMG/M
3300006797\|Ga0066659_10995894	Not Available	700	Open in IMG/M
3300007255\|Ga0099791_10127437	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1181	Open in IMG/M
3300007788\|Ga0099795_10625717	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	514	Open in IMG/M
3300009038\|Ga0099829_11396307	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	578	Open in IMG/M
3300009098\|Ga0105245_13122124	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	513	Open in IMG/M
3300010042\|Ga0126314_10124492	All Organisms → cellular organisms → Bacteria	1776	Open in IMG/M
3300010047\|Ga0126382_10037151	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2735	Open in IMG/M
3300010326\|Ga0134065_10346766	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	582	Open in IMG/M
3300010335\|Ga0134063_10600240	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	560	Open in IMG/M
3300010397\|Ga0134124_10385766	Not Available	1329	Open in IMG/M
3300010401\|Ga0134121_10132916	All Organisms → cellular organisms → Bacteria	2110	Open in IMG/M
3300011003\|Ga0138514_100158907	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	504	Open in IMG/M
3300012198\|Ga0137364_10018066	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	4265	Open in IMG/M
3300012198\|Ga0137364_10191129	Not Available	1498	Open in IMG/M
3300012198\|Ga0137364_10437804	Not Available	980	Open in IMG/M
3300012199\|Ga0137383_10008449	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	6788	Open in IMG/M
3300012199\|Ga0137383_10194917	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1485	Open in IMG/M
3300012199\|Ga0137383_10291273	Not Available	1195	Open in IMG/M
3300012200\|Ga0137382_10067921	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	2276	Open in IMG/M
3300012200\|Ga0137382_10309801	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1103	Open in IMG/M
3300012201\|Ga0137365_10517536	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	877	Open in IMG/M
3300012201\|Ga0137365_10730002	Not Available	724	Open in IMG/M
3300012202\|Ga0137363_10318968	Not Available	1279	Open in IMG/M
3300012202\|Ga0137363_10611398	Not Available	920	Open in IMG/M
3300012205\|Ga0137362_10661593	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	899	Open in IMG/M
3300012206\|Ga0137380_10008533	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	9253	Open in IMG/M
3300012206\|Ga0137380_10828056	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	798	Open in IMG/M
3300012209\|Ga0137379_11430768	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	594	Open in IMG/M
3300012210\|Ga0137378_10000269	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	37129	Open in IMG/M
3300012285\|Ga0137370_10045021	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	2350	Open in IMG/M
3300012353\|Ga0137367_10695521	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	708	Open in IMG/M
3300012354\|Ga0137366_10361596	Not Available	1061	Open in IMG/M
3300012356\|Ga0137371_10391674	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1078	Open in IMG/M
3300012357\|Ga0137384_10577004	Not Available	919	Open in IMG/M
3300012359\|Ga0137385_10696237	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	849	Open in IMG/M
3300012361\|Ga0137360_10531202	Not Available	1003	Open in IMG/M
3300012362\|Ga0137361_11557550	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	582	Open in IMG/M
3300012901\|Ga0157288_10423133	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	504	Open in IMG/M
3300012923\|Ga0137359_10524782	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1043	Open in IMG/M
3300012944\|Ga0137410_11563392	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	577	Open in IMG/M
3300012948\|Ga0126375_10850049	Not Available	728	Open in IMG/M
3300012976\|Ga0134076_10078560	Not Available	1284	Open in IMG/M
3300012989\|Ga0164305_11304205	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	635	Open in IMG/M
3300013306\|Ga0163162_10593395	Not Available	1234	Open in IMG/M
3300013770\|Ga0120123_1045987	Not Available	930	Open in IMG/M
3300014154\|Ga0134075_10214582	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	829	Open in IMG/M
3300015053\|Ga0137405_1276614	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	1083	Open in IMG/M
3300015373\|Ga0132257_100120146	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	3051	Open in IMG/M
3300016357\|Ga0182032_10835704	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	780	Open in IMG/M
3300017656\|Ga0134112_10036049	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	1759	Open in IMG/M
3300018027\|Ga0184605_10004120	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	5118	Open in IMG/M
3300018027\|Ga0184605_10131354	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1119	Open in IMG/M
3300018061\|Ga0184619_10477464	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	553	Open in IMG/M
3300018431\|Ga0066655_10074640	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1828	Open in IMG/M
3300018482\|Ga0066669_11069249	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	728	Open in IMG/M
3300019877\|Ga0193722_1025186	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	1538	Open in IMG/M
3300019879\|Ga0193723_1004196	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	4998	Open in IMG/M
3300019879\|Ga0193723_1017086	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	2245	Open in IMG/M
3300019882\|Ga0193713_1107204	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	775	Open in IMG/M
3300019887\|Ga0193729_1003723	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	7464	Open in IMG/M
3300019890\|Ga0193728_1359277	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	519	Open in IMG/M
3300020001\|Ga0193731_1007468	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	2780	Open in IMG/M
3300020001\|Ga0193731_1038581	Not Available	1261	Open in IMG/M
3300020004\|Ga0193755_1053798	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1313	Open in IMG/M
3300020004\|Ga0193755_1226641	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	516	Open in IMG/M
3300020006\|Ga0193735_1003774	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	4855	Open in IMG/M
3300020006\|Ga0193735_1038809	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1439	Open in IMG/M
3300020008\|Ga0193757_1020772	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	656	Open in IMG/M
3300020015\|Ga0193734_1006067	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	2229	Open in IMG/M
3300021411\|Ga0193709_1021252	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	1581	Open in IMG/M
3300022756\|Ga0222622_10237540	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1228	Open in IMG/M
3300024317\|Ga0247660_1066521	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	605	Open in IMG/M
3300025906\|Ga0207699_11248249	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	550	Open in IMG/M
3300025926\|Ga0207659_10950862	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	739	Open in IMG/M
3300026326\|Ga0209801_1113910	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1162	Open in IMG/M
3300026331\|Ga0209267_1172159	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	868	Open in IMG/M
3300026489\|Ga0257160_1086897	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	559	Open in IMG/M
3300026538\|Ga0209056_10482461	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	664	Open in IMG/M
3300026548\|Ga0209161_10483725	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	546	Open in IMG/M
3300028379\|Ga0268266_10229903	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1708	Open in IMG/M
3300028711\|Ga0307293_10062476	Not Available	1166	Open in IMG/M
3300028796\|Ga0307287_10037256	All Organisms → cellular organisms → Bacteria	1754	Open in IMG/M
3300028807\|Ga0307305_10528029	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	528	Open in IMG/M
3300028807\|Ga0307305_10543467	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	519	Open in IMG/M
3300028824\|Ga0307310_10163046	Not Available	1035	Open in IMG/M
3300028906\|Ga0308309_11130150	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	677	Open in IMG/M
3300030847\|Ga0075405_12156040	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2700	Open in IMG/M
3300031057\|Ga0170834_109596650	Not Available	1045	Open in IMG/M
3300031231\|Ga0170824_107328050	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	4125	Open in IMG/M
3300031446\|Ga0170820_15193976	Not Available	1241	Open in IMG/M
3300031474\|Ga0170818_111784087	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1272	Open in IMG/M
3300031716\|Ga0310813_10582785	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	987	Open in IMG/M
3300032180\|Ga0307471_100001445	All Organisms → cellular organisms → Bacteria	12959	Open in IMG/M
3300032421\|Ga0310812_10134111	Not Available	1042	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	91.43%
Host-Associated	Host-Associated	7.86%
Engineered	Engineered	0.71%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	88.57%
Plants	Host-Associated → Plants	7.86%
Aquatic	Environmental → Aquatic	2.86%
Modeled	Engineered → Modeled	0.71%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	87.86%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.29%
Sediment	Environmental → Aquatic → Sediment	2.86%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.86%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.71%
Roots	Host-Associated → Plants → Roots	0.71%
Simulated Communities (Sequence Read Mixture)	Engineered → Modeled → Simulated Communities (Sequence Read Mixture)	0.71%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	77.86%
Loam	Environmental → Terrestrial → Soil → Loam	10.00%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.57%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.86%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.43%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.71%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.71%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.71%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.71%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.71%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified	0.71%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	49.29%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	20.71%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	6.43%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.43%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.57%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.86%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.14%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.43%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.43%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.71%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.71%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.71%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.71%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.71%
Unclassified	Host-Associated → Plants → Roots → Rhizosphere → Unclassified	0.71%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.71%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified	0.71%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	22.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	19.29%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	17.14%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.71%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	3.57%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.86%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.14%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	2.14%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.14%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.14%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.43%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.43%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.43%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.43%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.43%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.43%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.71%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.71%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.71%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.71%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.71%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.71%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.71%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.71%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	0.71%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.71%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.71%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Unclassified → Tabebuia Heterophylla Rhizosphere	0.71%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.71%
Simulated	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified → Simulated	0.71%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2065487018	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
2166559005	Simulated microbial communities from Lyon, France	Engineered	Open in IMG/M
2170459003	Grass soil microbial communities from Rothamsted Park, UK - March 2009 indirect MP BIO 1O1 lysis 0-21cm	Environmental	Open in IMG/M
2170459005	Grass soil microbial communities from Rothamsted Park, UK - July 2009 direct MP BIO1O1 lysis 0-21cm	Environmental	Open in IMG/M
2170459010	Grass soil microbial communities from Rothamsted Park, UK - December 2009 direct MP BIO1O1 lysis 0-9cm (no DNA from 10 to 21cm!!!)	Environmental	Open in IMG/M
3300000709	Amended soil microbial communities from Kansas Great Prairies, USA - Total DNA F1.4 TB amended with BrdU and acetate no abondance	Environmental	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005981	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011003	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t9i015	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012901	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S119-311C-1	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013770	Permafrost microbial communities from Nunavut, Canada - A15_5cm_18M	Environmental	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300015053	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300019877	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m1	Environmental	Open in IMG/M
3300019878	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2m2	Environmental	Open in IMG/M
3300019879	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m2	Environmental	Open in IMG/M
3300019881	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3c2	Environmental	Open in IMG/M
3300019882	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3a2	Environmental	Open in IMG/M
3300019887	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2	Environmental	Open in IMG/M
3300019890	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1	Environmental	Open in IMG/M
3300020001	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a2	Environmental	Open in IMG/M
3300020004	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a2	Environmental	Open in IMG/M
3300020006	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m2	Environmental	Open in IMG/M
3300020008	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1m2	Environmental	Open in IMG/M
3300020015	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m1	Environmental	Open in IMG/M
3300021411	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3c2	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300024317	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK01	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)	Environmental	Open in IMG/M
3300026327	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132 (SPAdes)	Environmental	Open in IMG/M
3300026331	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes)	Environmental	Open in IMG/M
3300026489	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-11-A	Environmental	Open in IMG/M
3300026523	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300027605	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028711	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150	Environmental	Open in IMG/M
3300028796	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300030847	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA10 SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032421	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NN3	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPINP_00238100	2065487018	Soil	VASVVVGGLVAAGVAAGSVVSVFCSHAARSAALARMQMYFFIVLIGRGILL
cont_0778.00001590	2166559005	Simulated	VPLVDVDVSGEDSVVEAGLVVSVVVGGLVAAGLAAGSVVSVFCSHAARSAAPARMQMYFFIVLIGRGILL
E4A_02256870	2170459003	Grass Soil	GEASAGDSVIPPVDGDVSVEDSVVEAGLVVSVVVGGLVAAGVAAGSVVSVFCSHAARSAALARMQMYFFIVLIGRGILL
E41_09258730	2170459005	Grass Soil	RTGVSVVVGGLVAAGVAAGSVVSVFCSHAARSAALARMQMYFFIVLIGRGILL
F62_00637530	2170459010	Grass Soil	GLVVSVVVGGLVAAGLAAGSVVSVFCSHAARSAAPARMQMYFFIVLIGRGILL
KanNP_Total_F14TBDRAFT_10041902	3300000709	Soil	VEDSVVEGGLVSVVVGGLVAAGLAAGSVVSVFCSHAARSAAPARMQMYFFIVLIGRGIML
JGI12053J15887_102436961	3300001661	Forest Soil	RXYGVGEASAGDSVVVDVPVEDSVVEAGLVASVVVGGLVAAGLAAGSVVSVFCSHPARSAAPARMQMYFFIV*
Ga0062589_1028831352	3300004156	Soil	VVVAGLLTPVAAGGGVVGVGLAAGSVVSVFCSHAARSAAPARMQMHFFIVLVGSGTLL*
Ga0066674_101154511	3300005166	Soil	VVVVVVVSGVVAVGLAAGSVVSVFCSHAARSAALARMQMYFFIVIVGNGILL*
Ga0066672_100908963	3300005167	Soil	VVVAGLLTPVAAGGGVVGVGLAAGSVVSVFCSHAARSAALARMEMYFFIVLVGSGTLL*
Ga0066677_100373353	3300005171	Soil	VVVVVVVSAEAVAVGLAAGSVVSVFCSHAARSATLARMQMYFFIVIVGNGILL*
Ga0066683_100029101	3300005172	Soil	VVVSGVVAVGLAAGSVVSVFCSHAARSAALARMQMYFFIVIVGNGILL*
Ga0066683_100819701	3300005172	Soil	VVVAGLLTPVAAGGGVVGVGVAAGSVVSVFCSHAARSAALARMQMYFFIVLVRNGTLL*
Ga0066683_105345592	3300005172	Soil	VVVVVVVSGVVAVGLAAGSVVSVFCSHAARSAALARMQMYFFIV
Ga0066680_100039286	3300005174	Soil	VVVAGLLTPVAAGGGVVGVGLAAGSVVSVFCSHAARSAALARMQMYFFIVLVGSGTLL*
Ga0066688_104874372	3300005178	Soil	VEDSVVEAGLVVSVVVGGLVAAGLAAGSVVSVFCSHAARSAAPARMQMYFFIMLIGRGILL*
Ga0066684_109202391	3300005179	Soil	VAVAVAVGLAAGSVVSVFCSHAARSAALARMQMYFFIVIVGKRILL*
Ga0066676_105516103	3300005186	Soil	VVVAGLLTPVAAAGGVVGVGVAAGSVVSVFCSHAARSAALARMQMYFFIVLV
Ga0066676_105785632	3300005186	Soil	VPDSVGEVVVVVDSEVAAGLVLVSDGVVALGLAAGSVVSVFCSQAARTAALAKMQIYFFIMVIRKRILL*
Ga0066675_101608521	3300005187	Soil	VSVVVGGLVAAGLAAGSVVSVFCSHAARSAAPARMQMYFFIVLIGRGILL*
Ga0065704_100236192	3300005289	Switchgrass Rhizosphere	VEDSVVEAGLVVSVVVGGLVAAGLAAGSVVSVFCSHAARSAAPARMQMYFFIVLIGRGILL*
Ga0070675_1011307252	3300005354	Miscanthus Rhizosphere	VVVVVVVSDEAVAVGLAAGSVVSVFCSHAARSAALARMQMYFFIVIVGNGILL*
Ga0070667_1003882593	3300005367	Switchgrass Rhizosphere	VDVVVEDSVVEAGLVDSVVVGGLVAAGVAAGSVVSVFCSHAARSAALASMQMYFFIVLIG
Ga0070709_111184772	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	VEGDVPVEDSVVEAGLVVSVVVGGLVAAGLAAGSVVSVFCSHAARSAAPARMQMYFFIMLIGRGILL*
Ga0070714_1001265832	3300005435	Agricultural Soil	VEDSVVDAGLVVSVVVGGLVAAGLAAGSVVSVFCSHAARSAAPARMHMYFFIVLIGRGILL*
Ga0070710_100326902	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	VEGDVAVEDSVVEAGLVVSVVVGGLVAAGLAAGSVVSVFCSHAARSAAPARMQMYFFIMLIGRGILL*
Ga0066687_107108502	3300005454	Soil	SVVVGGLVAAGLAAGSVVSVFCSHAARSAAPARMQMYFFIVLIGRGILL*
Ga0070678_1011574862	3300005456	Miscanthus Rhizosphere	VDVVVEDSVVEAGLVDSVVVGGLVAAGVAAGSVVSVFCSHAARSAALARMQMYFFIVLIRRGILL*
Ga0070698_1011300772	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	VSVGLAVVVVVVVSDEAVAVGLAAAGSVVSVFCSHAARSAALARMQMYFFILVVGKGILL
Ga0070699_1002262163	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	VVVVVVVSDEAVAVGLAAAGSVVSVFCSHAARSAALARMQMYFFILVVGKGILL*
Ga0066697_101125913	3300005540	Soil	EDSVVEAGLVVSVVVGGLVAAGLAAGSVVSVFCSHAARSAAPARMQMYFFIMLIGRGILL
Ga0070665_1015675382	3300005548	Switchgrass Rhizosphere	VDVVVEDSAVEAGLVDSVVVGGLVAAGVAAGSVVSVFCSHAARSAALARMQMYFFIVLIRRGILL*
Ga0081538_100380291	3300005981	Tabebuia Heterophylla Rhizosphere	MVAGGDSIGVVVVVVSSVAGGLVGSGLAAAGSVVSVFCSHAARSAALARMQMYFFIMLIGRVILL*
Ga0070717_100241875	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	VEDSVVDAGLVVSVVVGGLVAAGLAAGSVVSVFCSHAARSAAPARMQMYFFIMLIGRGILL*
Ga0066696_102325322	3300006032	Soil	MAAGDSVIAAGLYVWVVAGGLVAAGVAAGSVVSVFCSHANSSAALIRMNMYFFIVLI*
Ga0066652_1008116922	3300006046	Soil	AGLYVWVVAGGLVAAGVAAGSVVSVFCSHADSSAALIRMNMYFFIVLI*
Ga0070716_1010625311	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	VEDSVVDAGLVVVSVVVGGLVAAGLAAGSVVSVFCSHAARSAAPARMHMYFFIVLIGRGILL*
Ga0066665_105333962	3300006796	Soil	VVEAGLVVSVVVGGLVAAGLAAGSVVSVFCSHAARSAAPARMQMYFFIVLIGRGILL*
Ga0066659_109958942	3300006797	Soil	PAGLSVVVAGLVAAGLAAGSVVSVFCSHAARRATLARMQMYFFILIVREGTLL*
Ga0099791_101274372	3300007255	Vadose Zone Soil	VVSAGLVVVVVVVSDEAVAVGLAAGSVVSVFCSHAARSAALARMQMYFFIVIVGNGILL*
Ga0099795_106257172	3300007788	Vadose Zone Soil	VTAVVAGGHVGAGVAAGSVVSVFCSHAARSAALARMQMYFFIVLIGRGILL*
Ga0099829_113963072	3300009038	Vadose Zone Soil	VVVVVVSAVAVAVGLAAGSVVSVFCSHAARSAALARMQMYFFIVIVGKAILL*
Ga0105245_131221241	3300009098	Miscanthus Rhizosphere	VDVVVEDSVVEAGLVDSVVVGGLVAAGVAAGSVVSVFCSHAARSAALARMQMYFFIV
Ga0126314_101244922	3300010042	Serpentine Soil	VAAGLYVSVVVGGLVAAGVAAGSVVSVFCSHADSSAAPIRINMYFFIVLIRIVTLT*
Ga0126382_100371513	3300010047	Tropical Forest Soil	VAGDSVVDAGLVVSVVVVVGGLVAAGVAAGSVVSVFCSHAARSAALARMQMYFFIVLIGRGILL*
Ga0134065_103467661	3300010326	Grasslands Soil	MVVAGLLTPVAAGGGVVGVGVAAGSVVSVFCSHAARSAALARMQMYFFIVLVRNGTLL*
Ga0134063_106002402	3300010335	Grasslands Soil	GLVVSVVVGGLVAAGVAAGSVVSVFCSHAARSAAPARIQMYFFIVLIGRGILL*
Ga0134124_103857661	3300010397	Terrestrial Soil	VDVDVPVEDSVVEAGLVVSVVVGGLVAAGVAAGSVVSVFCSHAARSAALARMQMYFFIMLIGRGILL*
Ga0134121_101329162	3300010401	Terrestrial Soil	VEDSVVEAGLVVSVVVGGLVAAGVAAGSVVSVFCSHAARSAALARMQMYFFIMLIGRGILL*
Ga0138514_1001589072	3300011003	Soil	VEAGLVVSVVVGGLVAAGLAAGSVVSVFCSHPARSAAPARMQMYFFIVLIGRGILL*
Ga0137364_100180661	3300012198	Vadose Zone Soil	VVVVVVVSGVVAVGLAAGSVVSVFCSHAARSAALARMQMYFFIVIIGKGTLL*
Ga0137364_101911292	3300012198	Vadose Zone Soil	VVVVVVVSGEALVVGLAAGSVVSVFCSQAARSATLARMQMYFFIVIVGNGILL*
Ga0137364_104378042	3300012198	Vadose Zone Soil	VSVVVAGVVAAGLAAGSVVSVFCSHAARSAALARMQMYFFIVIVGKRILL*
Ga0137383_100084496	3300012199	Vadose Zone Soil	VVVGGLVAAGLAAGSVVSVFCSHAARSAALARMQMYFFIVLIGRGILL*
Ga0137383_101949173	3300012199	Vadose Zone Soil	VGLVVVVVVVVSGEAVAVGLAAGSVVSVFCSHAARSAALARMQMYFFIVIIGNAILL*
Ga0137383_102912732	3300012199	Vadose Zone Soil	VAGLVAAGLAAGSVVSVFCSHAARSAALARMQMYFFIVIVGKGILL*
Ga0137382_100679212	3300012200	Vadose Zone Soil	VVVVVVVSAEAVAVGLAAGSVVSVFCSHAARSAALARMQMYFFIVIVGNGILL*
Ga0137382_103098011	3300012200	Vadose Zone Soil	AGDSVVVAGLLTPVAAGGGVVGVGLAAGSVGSVFCSHAARSAALARMQMYFFIVLVGSGTLL*
Ga0137365_105175361	3300012201	Vadose Zone Soil	VVVVVVVVSGEAVAVGLAAGSVVSVFCSHAARSAALARMQMYFFIVIIGNAILL*
Ga0137365_107300022	3300012201	Vadose Zone Soil	SVVVAGVVAAGLAAGSVVSVFCSHAARRAALARMQIYFFIIVVGSAYCFK*
Ga0137363_103189682	3300012202	Vadose Zone Soil	DVDVSGEDSVVEAGLVVSVVVGGLVAAGLAAGSVVSVFCSHPARSAAPARMQMYFFIVLIGRGILL*
Ga0137363_106113981	3300012202	Vadose Zone Soil	DVDVSGEDSVVEAGLVVSVVVGGLVAAGLAAGSVVSVFCSHAARSAAPARMQIYLFIVLFGRGILL*
Ga0137362_106615932	3300012205	Vadose Zone Soil	VVVAGLLTPVAAAGGVVGVGVAAGSVVSVFCSHAARSAALARMQMYFFIVLVRNGTLL*
Ga0137380_100085336	3300012206	Vadose Zone Soil	VVVVVVSAVAVAVGLAAGSVVSVFCSHAARSAVLARMQMYFFIVIVGKGILL*
Ga0137380_108280562	3300012206	Vadose Zone Soil	VVVVVVVSGEAVAVGLAAGSVVSVFCSHAARSATLARMQMYFFIVIVGNGILL*
Ga0137379_114307681	3300012209	Vadose Zone Soil	VVAGDSVVVVVGGLVAAGLAAGSVVSVFCSHAARSAALARMQMYFFIVLIGRGILL*
Ga0137378_1000026929	3300012210	Vadose Zone Soil	VVAGDSVVVVVGGLVAAGLAAGSVVSVFCSHAARSAALARMQMYFFIVLIGRG
Ga0137370_100450211	3300012285	Vadose Zone Soil	VPVEDSVVEAGLVVSVVVGGLVAAGLAAGSVVSVFCSHAARSAAPARMQMYFFIVLIGRGILL*
Ga0137367_106955211	3300012353	Vadose Zone Soil	VVVVVVVSDEAVAVGLAAAGSVVSVFCSHAARSAALARMQMYFFIVIVGNGILL*
Ga0137366_103615962	3300012354	Vadose Zone Soil	SVVVAGVVAAGLAAGSVVSVFCSHAARSAALARMQMYFFIVIIGKGILV*
Ga0137371_103916742	3300012356	Vadose Zone Soil	VVVAGLLTPVAAGGGVVGVGVAAGSVVSVFCSHAARSAALARMQMYFFIVLVRNG
Ga0137384_105770042	3300012357	Vadose Zone Soil	VVAGLVAAGLAAGSVVSVFCSHAARRATLARMQMYFFILIVREGTLL*
Ga0137385_106962372	3300012359	Vadose Zone Soil	VVVVVVSAVAVAVGLAAGSVVSVFCSHAARSAALARMQMYFFILIVGKGILL*
Ga0137360_105312021	3300012361	Vadose Zone Soil	EVDAPVEDSVVEAGLVVSVVVGGLVAAGLAAGSVVSVFCSQPARSAAPARMQMYFFIVLIGRGILL*
Ga0137361_105679881	3300012362	Vadose Zone Soil	VSEPVAVGLAAAGSEGVSVFCPHAARSEALARMQMYFFIV*
Ga0137361_115575502	3300012362	Vadose Zone Soil	SAVAVAVGLAAGSVVSVFCSHAARSAALARMQMYFFIVIVGKGILL*
Ga0157288_104231332	3300012901	Soil	VEDSVVEAGLVVSVVVGGLVAAGLAAGSVVSVFCSHPARSAAPARMQMYFFIVLIGRGILL*
Ga0137359_105247821	3300012923	Vadose Zone Soil	VEDSVVEAGLVVSVVVGGLVAAGLAAGSVVSVFCSHAARSAALARMQMYFFIVLIGRGILL*
Ga0137410_115633922	3300012944	Vadose Zone Soil	ASAGDSVVVDVPVEDSVVEAGLVASVVVGGLVGAGLAAGSVVSVFCSHPARSAAPARMQMYFFIV*
Ga0126375_108500491	3300012948	Tropical Forest Soil	SLVVGGLVAAGLAAGSVVSVFCSHAARSAALARMQMYFFIVLIGRGILL*
Ga0134076_100785601	3300012976	Grasslands Soil	DVPVEDSVVEAGLLVSVVVGGLVAAGLAAGSVVSVFCSHAARSAAPARMQMYFFIVLIGRGILL*
Ga0164305_113042052	3300012989	Soil	VEESVVEAGLVVSVVVGGLVAAGLAAGSVVSVFCSHAVRSAAPARMQMYFFIVLIGRGILL*
Ga0163162_105933951	3300013306	Switchgrass Rhizosphere	VVVGGLVAAGVAAGSVVSVFCSHAARSAALARMQMYFFIVLIGRGILR*
Ga0120123_10459872	3300013770	Permafrost	VVVVVVSDETVAVGLAAGSVVSVFCSHAARSAALARMQMYFFIVIVGKGILL*
Ga0134075_102145822	3300014154	Grasslands Soil	VVVAGLVTPVAAGGGVVGVGLAAGSVVSVFCSHAARSAALARMQMYFFIVLVRNGTLL*
Ga0137405_12766142	3300015053	Vadose Zone Soil	MVVVVVVSDEAVAVGLAAGSVVSVFCSHAARSAALARMQMYFFIVIVGNGILL*
Ga0132257_1001201462	3300015373	Arabidopsis Rhizosphere	VDVVVEDSVVEAGLVDSVVVGGLVAAGVAAGSVVSVFCSHAARSAALAKMQMYFFIVLIRRSILL*
Ga0182032_108357042	3300016357	Soil	VVVAGLLTPVAAAGGVVGAGVAAGWVVSVFCSHAARSAALARMQMYFFIVLVRNGTLL
Ga0134112_100360493	3300017656	Grasslands Soil	DVPVEDSVVEAGLVVSVVVGGLVAAGLAAGSVVSVFCSHAARSAAPARMQMYFFIVLIGRGILL
Ga0184605_100041202	3300018027	Groundwater Sediment	VGDAVGDVVVVVSEVVAVGLAAGSVVSVFCSHAARSAALARMQMYFFIMVVGKSILL
Ga0184605_101313542	3300018027	Groundwater Sediment	VVVVVVVSGVVAVGLAAGSVVSVFCSHAARSAALARMQMYFFIVIVGNGILL
Ga0184619_104774641	3300018061	Groundwater Sediment	VVVAGLLTPVAAAGGVVDVGVAAGSVVSVFCSHAARSAALARMQMYFFIVLVRNGTLL
Ga0066655_100746402	3300018431	Grasslands Soil	VVVVVVVVSGEAVAVGLAAGSVVSVFCSHAASSAALARMQMYFFIVIIGNGILL
Ga0066669_110692492	3300018482	Grasslands Soil	VVVVVVVSGVVAVGLAAGSVVSVFCSHAARSAALARMQMYFFIVI
Ga0173479_102164592	3300019362	Soil	GVGEGSAGDSVVPPVDVDVPVEDSVVEGGLVASVVVGGLVAAGVAAGSVVSVFCSHAARSAALARMQMYFFIVLIGRGILL
Ga0193722_10251862	3300019877	Soil	VEDSVVEAGLVASDVVVGGLVAAGLAAGSVVSVFCSHAARSAALARMQMYFFIMLIGRGILL
Ga0193715_10959171	3300019878	Soil	VGDAVGDVVVVVSEVVAVGLAAGSVVSVFCSHAAKSAALARMQMYFFIMVVGKSILLYLTIRSKALFGPVAFCF
Ga0193723_10041963	3300019879	Soil	MVVVVVSAVAVAVGLAAGSVVSVFCSHAARSAALARMQMYFFIVIVGKGILL
Ga0193723_10170862	3300019879	Soil	VVVAGLLTPVAAAGGVVGVGVAAGSVVSVFCSHATRSAALARMQMYFFIVLVRNETLL
Ga0193707_11097242	3300019881	Soil	VVVVVDSVEVVAVGLAAGVTVSVFCSQAASNAALAKMQMYFFIMVWLRKGYSVKS
Ga0193713_11072041	3300019882	Soil	VPSVGEVVVVVDSEVAAGLVDSDGVVALGLAAGSVVSVFCSHAARSAALARMQIYFFIMVVGKRILL
Ga0193729_10037236	3300019887	Soil	VEDSVVEAGLVVSVVVGGLVAAGLAAGSVVSVFCSHAARSAAPARIQMYFFIVLIGRGIL
Ga0193728_13592771	3300019890	Soil	VEDSVVEAGLVVSVVVGGLVAAGLAAGSVVSVFCSHAARSAAPARIQMYFFIVLIGR
Ga0193731_10074681	3300020001	Soil	VEDSVVEAGLVASDVVVGGLVAAGLAAGSVVSVFCSHAARSAALARMQMYFFIMLIGRDILL
Ga0193731_10385811	3300020001	Soil	VVVVVVVSVEAVAVGLAAAGSVVSVFCSHAARSAALARMQMYFFIVIVGNGILL
Ga0193755_10537981	3300020004	Soil	VVVAGLLTPVAAAGGVVGVGVAAGSVVSVFCSHAARRAALARMQMYFFIVLVRNGTLL
Ga0193755_12266411	3300020004	Soil	VEDSVVEAGLVVSVVVGGLVAAGLAAGSVVSVFCSHAARSAAPARIQIYFFIVLIGRGIL
Ga0193735_10037742	3300020006	Soil	VVVVVVVVSDEAVAVGLAAGSVVSVFCSHAARSAALARMQMYFFIVIVGNGILL
Ga0193735_10388093	3300020006	Soil	VVVVVVVSDEAVAVGLAAGSVVSVFCSHAARSAALARMQMYFFIVIVGNGILLN
Ga0193757_10207721	3300020008	Soil	VVVAGLLTPVAAAGGVVGVGVAAGSVVSVFCSHAARSAALARMQMYFFIVLVRNGTLL
Ga0193734_10060672	3300020015	Soil	VVSAGLVVVVVVVSDEAVAVGLAAGSVVSVFCSHAARSAALARMQMYFFIVIVGNGILL
Ga0193709_10212523	3300021411	Soil	TGDSLVPPVDVDVPVEDSVVEAGLVVSVVVGGLVAAGLAAGSVVSVFCSHAARSAAPARIQIYFFIVLIGRGILL
Ga0222622_102375401	3300022756	Groundwater Sediment	VEDSVVEAGLVDSVVVGGLVAAGVAAGSVVSVFCSHAARSAALARMQMYFFIVLIGRGIL
Ga0247660_10665212	3300024317	Soil	LVVVVVVVVSDEAVAVGLAAAGSVVSVFCSHAARSAALARMQMYFFILVVGKGILL
Ga0207699_112482491	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	VEGDVPVEDSVVEAGLVVSVVVGGLVAAGLAAGSVVSVFCSHAARSAAPARMHMYFFIVLIGKGILL
Ga0207659_109508621	3300025926	Miscanthus Rhizosphere	VVVVVVVSDEAVAVGLAAGSVVSVFCSHAARSAALARMQMYFFIVIVGNGILL
Ga0207700_103074481	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	VEDSVVDAGLVVSVVVGGLVAAGLAAGSVVSVFCSHAARSAAPARMHMYF
Ga0209801_11139102	3300026326	Soil	VVVVVVVSGVVAVGLAAGSVVSVFCSHAARSAALARMQMYFFIVIV
Ga0209266_10093001	3300026327	Soil	ELSAGDSLVPPVDVDVSGEDSVVEAGLVVSVVVGGLVAAGLAAGSVVSVFCSHAARSAAPARMQMYFFIVLIGRGILL
Ga0209267_11721592	3300026331	Soil	VVVVVVVSAEAVAVGLAAGSVVSVFCSHAARSATLARMQMYFFIVIVGNGILL
Ga0257160_10868972	3300026489	Soil	VEDSVVEAGLVVSVVVGGLVAAGLAAGSVVSVFCSHAARSAALARMQMYFFIVIVGKGIL
Ga0209808_10015789	3300026523	Soil	GVGEASTGDSVVPPVDGDVPVEDSVVEAGLLVSVVVGGLVAAGLAAGSVVSVFCSHAARSAAPARMQMYFFIVLIGRGILL
Ga0209056_104824612	3300026538	Soil	GDSVVEAGLVASVVVGGLVAAGLAAGSVVSLFCSHAARSAALARMQIYFFIMLIGRGILL
Ga0209161_104837252	3300026548	Soil	VSVGLAVVVVVVVSGEAVAVGLAAAGSVVSVFCSHAARRAALARMQMYFFILVVGK
Ga0209329_11190722	3300027605	Forest Soil	AVPPVDVDVSVEDSVVEAGLVVSVVVEAGLVVSVVVGGLVAAGLAAGSVVSVFCSHAARSAAPARMQMYFFIMLIGRGILL
Ga0268266_102299031	3300028379	Switchgrass Rhizosphere	VVSVVVGGLVAAGVAAGSVVSVFCSHAARSAALARMQMYFFIVLIRRGILL
Ga0307293_100624762	3300028711	Soil	VEDSVVEAGLVVSVVVGGLVAAGLAAGSVVSVFCSHPARSAAPARMQMYFFIVLIGRGIL
Ga0307287_100372562	3300028796	Soil	VEDSVFEAGLVDSVVVGGLVAAGVAAGSVVSVFCSHAARSAALARMQMYFFIVLIGRGIL
Ga0307305_105280292	3300028807	Soil	GLSVVVGGVVAAGLAAGSVVSVFCSHAARSAALARMQMYFFMIMVREGTFL
Ga0307305_105434671	3300028807	Soil	VVSAGLVVVVVVVSDEAVAVGLAAGSVVSVFCSHAARSVALARMQMYFFIVIIGNGILL
Ga0307310_101630461	3300028824	Soil	VVAGGLVAAGVAAGSVVSVFCSHAAKSAALARMQMYFFIVLIGRGILL
Ga0308309_111301502	3300028906	Soil	VVSVVVEAGLVVSVVVGGLVAAGLAAGSVVSVFCSHAARSAAPARMQMYFFIMLIGRGIL
Ga0075405_121560403	3300030847	Soil	VVVVVVSAGAEAVGVGLAAGSVVSVFCSHAARSAALARMQMYFFIVIDGKVILL
Ga0170834_1095966502	3300031057	Forest Soil	VVVVVVSAVAVAVGLAAGSVVSVFCSHAARSAALARMQMYFFIVIVGKGILL
Ga0170824_1073280501	3300031231	Forest Soil	EAGLVVSVVVGGLVAAGLAAGSVVSVFCSHAARSAAPARMQMYFFIMLIGRGILL
Ga0170820_151939761	3300031446	Forest Soil	VPPVDVDVPVEDSVVEAGLVVSVVVGGLVAAGLAAGSVVSVFCSHAARSAAPARMQMYFFIVLIGRGILL
Ga0170818_1117840871	3300031474	Forest Soil	VPLVDVDVSGEDSVVEAGLVVSVVVGGLVAAGLAAGSVVSVFCSHAARSAAPARMQ
Ga0310813_105827852	3300031716	Soil	VEDSVVEAGLVVSVVVGGLVAAGLAAGSVVSVFCSHAARSAAPARMQMYFFIVLIGR
Ga0307471_1000014456	3300032180	Hardwood Forest Soil	VEDSVVEAGLVSVVVGGLVAAGLAAGSVVSVFCSHAARSAAPARIQKYFFIVLIGRGILL
Ga0310812_101341112	3300032421	Soil	VPVEDSVVEAGLVVSVVVGGLVAAGLAAGSVVSVFCSHAARSAAPARMQMYFFIVLIGRGILL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F054272

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences