Metagenome / Metatranscriptome Family F054261

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F054261
Family Type	Metagenome / Metatranscriptome
Number of Sequences	140
Average Sequence Length	45 residues
Representative Sequence	MPSSAVRTFTDPDEYFAGIRNLQIEGVVARGEFRAELTRID
Number of Associated Samples	101
Number of Associated Scaffolds	140

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	97.14 %
% of genes near scaffold ends (potentially truncated)	97.14 %
% of genes from short scaffolds (< 2000 bps)	84.29 %
Associated GOLD sequencing projects	92
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.34

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (51.429 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (51.429 % of family members)
Environment Ontology (ENVO)	Unclassified (65.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (47.857 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 14.49% β-sheet: 0.00% Coil/Unstructured: 85.51%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.34
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.34
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 140 Family Scaffolds
PF09865	DUF2092	8.57
PF00873	ACR_tran	5.00
PF04226	Transgly_assoc	3.57
PF07885	Ion_trans_2	2.86
PF01594	AI-2E_transport	2.14
PF03200	Glyco_hydro_63	2.14
PF12833	HTH_18	1.43
PF05494	MlaC	1.43
PF11339	DUF3141	1.43
PF16576	HlyD_D23	1.43
PF00300	His_Phos_1	0.71
PF01527	HTH_Tnp_1	0.71
PF02597	ThiS	0.71
PF13193	AMP-binding_C	0.71
PF01699	Na_Ca_ex	0.71
PF00999	Na_H_Exchanger	0.71
PF00691	OmpA	0.71
PF13533	Biotin_lipoyl_2	0.71
PF03446	NAD_binding_2	0.71
PF00589	Phage_integrase	0.71
PF03237	Terminase_6N	0.71
PF02371	Transposase_20	0.71
PF10014	2OG-Fe_Oxy_2	0.71
PF05598	DUF772	0.71
PF01436	NHL	0.71
PF00501	AMP-binding	0.71
PF00497	SBP_bac_3	0.71

COG ID	Name	Functional Category	% Frequency in 140 Family Scaffolds
COG2261	Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein family	General function prediction only [R]	3.57
COG0628	Predicted PurR-regulated permease PerM	General function prediction only [R]	2.14
COG2854	Periplasmic subunit MlaC of the ABC-type intermembrane phospholipid transporter Mla	Cell wall/membrane/envelope biogenesis [M]	1.43
COG0025	NhaP-type Na+/H+ or K+/H+ antiporter	Inorganic ion transport and metabolism [P]	0.71
COG0387	Cation (Ca2+/Na+/K+)/H+ antiporter ChaA	Inorganic ion transport and metabolism [P]	0.71
COG0475	Kef-type K+ transport system, membrane component KefB	Inorganic ion transport and metabolism [P]	0.71
COG0530	Ca2+/Na+ antiporter	Inorganic ion transport and metabolism [P]	0.71
COG1977	Molybdopterin synthase sulfur carrier subunit MoaD	Coenzyme transport and metabolism [H]	0.71
COG2104	Sulfur carrier protein ThiS (thiamine biosynthesis)	Coenzyme transport and metabolism [H]	0.71
COG3004	Na+/H+ antiporter NhaA	Energy production and conversion [C]	0.71
COG3263	NhaP-type Na+/H+ and K+/H+ antiporter with C-terminal TrkAC and CorC domains	Energy production and conversion [C]	0.71
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.71
COG4651	Predicted Kef-type K+ transport protein, K+/H+ antiporter domain	Inorganic ion transport and metabolism [P]	0.71

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.43 %
All Organisms	root	All Organisms	48.57 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.43 %
cellular organisms	root	All Organisms → cellular organisms	48.57 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.43 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	48.57 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.43 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	30.71 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.71 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → environmental samples	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.43 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	21.43 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.71 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.71 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.43 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5.00 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	4.29 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	2.86 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.71 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.71 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.43 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.86 %
Azospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae	0.71 %
Desulfovibrionales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales	0.71 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.71 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.71 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.71 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.71 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.43 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.86 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	0.71 %
Rhodovastum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodovastum	0.71 %
Skermanella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Skermanella	0.71 %
Desulfovibrionaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfovibrionaceae	0.71 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.71 %
Methylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	0.71 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.43 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.86 %
unclassified Methylobacterium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium	0.71 %
Mesorhizobium waimense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium waimense	0.71 %
Skermanella stibiiresistens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Skermanella → Skermanella stibiiresistens	0.71 %
Rhodovastum atsumiense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodovastum → Rhodovastum atsumiense	0.71 %
Fundidesulfovibrio	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfovibrionaceae → Fundidesulfovibrio	0.71 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	0.71 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.43 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.86 %
Methylobacterium sp. 17Sr1-1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium → Methylobacterium sp. 17Sr1-1	0.71 %
Fundidesulfovibrio putealis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfovibrionaceae → Fundidesulfovibrio → Fundidesulfovibrio putealis	0.71 %
Mesorhizobium waimense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium waimense	0.71 %
Skermanella stibiiresistens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Skermanella → Skermanella stibiiresistens	0.71 %
Rhodovastum atsumiense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodovastum → Rhodovastum atsumiense	0.71 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	0.71 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.71 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001545\|JGI12630J15595_10043902	Not Available	902	Open in IMG/M
3300005332\|Ga0066388_103179107	Not Available	839	Open in IMG/M
3300005363\|Ga0008090_10267319	All Organisms → cellular organisms → Bacteria → Proteobacteria	658	Open in IMG/M
3300005444\|Ga0070694_100364671	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1123	Open in IMG/M
3300005468\|Ga0070707_101527254	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	635	Open in IMG/M
3300005610\|Ga0070763_10445978	Not Available	734	Open in IMG/M
3300006173\|Ga0070716_101449365	Not Available	560	Open in IMG/M
3300006354\|Ga0075021_10994162	Not Available	547	Open in IMG/M
3300006804\|Ga0079221_10208595	Not Available	1077	Open in IMG/M
3300006852\|Ga0075433_11496805	Not Available	583	Open in IMG/M
3300006954\|Ga0079219_10974232	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	699	Open in IMG/M
3300009174\|Ga0105241_12677535	Not Available	502	Open in IMG/M
3300010366\|Ga0126379_10041471	All Organisms → cellular organisms → Bacteria → Proteobacteria	3710	Open in IMG/M
3300011392\|Ga0153987_1003836	All Organisms → cellular organisms → Bacteria	2365	Open in IMG/M
3300012951\|Ga0164300_10607281	Not Available	647	Open in IMG/M
3300015374\|Ga0132255_105689606	Not Available	527	Open in IMG/M
3300016270\|Ga0182036_10082323	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfovibrionaceae → Fundidesulfovibrio → Fundidesulfovibrio putealis	2135	Open in IMG/M
3300016270\|Ga0182036_11085901	All Organisms → cellular organisms → Bacteria	662	Open in IMG/M
3300016270\|Ga0182036_11820016	Not Available	515	Open in IMG/M
3300016294\|Ga0182041_10016769	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4369	Open in IMG/M
3300016294\|Ga0182041_11752581	Not Available	575	Open in IMG/M
3300016319\|Ga0182033_10068742	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2486	Open in IMG/M
3300016319\|Ga0182033_10245984	All Organisms → cellular organisms → Bacteria	1450	Open in IMG/M
3300016319\|Ga0182033_10978252	Not Available	752	Open in IMG/M
3300016319\|Ga0182033_11007116	Not Available	741	Open in IMG/M
3300016319\|Ga0182033_11361749	Not Available	638	Open in IMG/M
3300016341\|Ga0182035_10018217	All Organisms → cellular organisms → Bacteria → Proteobacteria	4301	Open in IMG/M
3300016341\|Ga0182035_10053362	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium → Methylobacterium sp. 17Sr1-1	2756	Open in IMG/M
3300016357\|Ga0182032_10804343	Not Available	795	Open in IMG/M
3300016357\|Ga0182032_11295499	All Organisms → cellular organisms → Bacteria	629	Open in IMG/M
3300016371\|Ga0182034_10825388	All Organisms → cellular organisms → Bacteria → Proteobacteria	794	Open in IMG/M
3300016387\|Ga0182040_10110889	All Organisms → cellular organisms → Bacteria	1883	Open in IMG/M
3300016404\|Ga0182037_11174057	Not Available	674	Open in IMG/M
3300016404\|Ga0182037_11501842	Not Available	597	Open in IMG/M
3300017933\|Ga0187801_10133350	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	959	Open in IMG/M
3300017942\|Ga0187808_10219229	All Organisms → cellular organisms → Bacteria	848	Open in IMG/M
3300020579\|Ga0210407_11281418	Not Available	548	Open in IMG/M
3300020580\|Ga0210403_10990176	All Organisms → cellular organisms → Bacteria	658	Open in IMG/M
3300020581\|Ga0210399_10187553	All Organisms → cellular organisms → Bacteria	1718	Open in IMG/M
3300020583\|Ga0210401_10728001	All Organisms → cellular organisms → Bacteria	852	Open in IMG/M
3300021088\|Ga0210404_10144380	Not Available	1242	Open in IMG/M
3300021088\|Ga0210404_10623558	Not Available	613	Open in IMG/M
3300021168\|Ga0210406_11038144	Not Available	607	Open in IMG/M
3300021171\|Ga0210405_10477898	All Organisms → cellular organisms → Bacteria	978	Open in IMG/M
3300021178\|Ga0210408_10907694	Not Available	685	Open in IMG/M
3300021178\|Ga0210408_11108586	Not Available	608	Open in IMG/M
3300021180\|Ga0210396_11186438	All Organisms → cellular organisms → Bacteria	639	Open in IMG/M
3300021358\|Ga0213873_10023553	All Organisms → cellular organisms → Bacteria → Proteobacteria	1469	Open in IMG/M
3300021404\|Ga0210389_10416863	All Organisms → cellular organisms → Bacteria	1056	Open in IMG/M
3300021405\|Ga0210387_10530905	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1046	Open in IMG/M
3300021405\|Ga0210387_11654802	All Organisms → cellular organisms → Bacteria	543	Open in IMG/M
3300021432\|Ga0210384_11825556	Not Available	513	Open in IMG/M
3300021474\|Ga0210390_10042959	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3700	Open in IMG/M
3300021478\|Ga0210402_11342737	Not Available	642	Open in IMG/M
3300021560\|Ga0126371_10197229	All Organisms → cellular organisms → Bacteria → Proteobacteria	2106	Open in IMG/M
3300025910\|Ga0207684_11049973	Not Available	680	Open in IMG/M
3300025929\|Ga0207664_10832683	All Organisms → cellular organisms → Bacteria	830	Open in IMG/M
3300025939\|Ga0207665_10080769	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2237	Open in IMG/M
3300027812\|Ga0209656_10148191	Not Available	1179	Open in IMG/M
3300027884\|Ga0209275_10702471	Not Available	582	Open in IMG/M
3300028047\|Ga0209526_10148558	All Organisms → cellular organisms → Bacteria → Proteobacteria	1642	Open in IMG/M
3300028906\|Ga0308309_10707948	All Organisms → cellular organisms → Bacteria	875	Open in IMG/M
3300031543\|Ga0318516_10338288	Not Available	869	Open in IMG/M
3300031545\|Ga0318541_10198334	All Organisms → cellular organisms → Bacteria	1110	Open in IMG/M
3300031545\|Ga0318541_10272041	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	943	Open in IMG/M
3300031573\|Ga0310915_10013562	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Skermanella → Skermanella stibiiresistens	4797	Open in IMG/M
3300031573\|Ga0310915_10124977	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1759	Open in IMG/M
3300031573\|Ga0310915_10226095	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1313	Open in IMG/M
3300031573\|Ga0310915_10450595	Not Available	914	Open in IMG/M
3300031668\|Ga0318542_10188176	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1038	Open in IMG/M
3300031679\|Ga0318561_10025066	Not Available	2821	Open in IMG/M
3300031680\|Ga0318574_10755942	All Organisms → cellular organisms → Bacteria	570	Open in IMG/M
3300031681\|Ga0318572_10962910	Not Available	507	Open in IMG/M
3300031708\|Ga0310686_102845452	Not Available	799	Open in IMG/M
3300031719\|Ga0306917_10015657	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4523	Open in IMG/M
3300031719\|Ga0306917_10415146	Not Available	1052	Open in IMG/M
3300031719\|Ga0306917_10601552	Not Available	864	Open in IMG/M
3300031736\|Ga0318501_10273790	All Organisms → cellular organisms → Bacteria	897	Open in IMG/M
3300031736\|Ga0318501_10588083	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	611	Open in IMG/M
3300031744\|Ga0306918_10038931	Not Available	3077	Open in IMG/M
3300031744\|Ga0306918_10725287	Not Available	777	Open in IMG/M
3300031751\|Ga0318494_10539248	Not Available	681	Open in IMG/M
3300031753\|Ga0307477_10172417	All Organisms → cellular organisms → Bacteria → Proteobacteria	1508	Open in IMG/M
3300031763\|Ga0318537_10132693	Not Available	926	Open in IMG/M
3300031763\|Ga0318537_10306990	Not Available	587	Open in IMG/M
3300031768\|Ga0318509_10048175	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2162	Open in IMG/M
3300031768\|Ga0318509_10104687	Not Available	1529	Open in IMG/M
3300031768\|Ga0318509_10718957	Not Available	554	Open in IMG/M
3300031771\|Ga0318546_11106722	Not Available	557	Open in IMG/M
3300031781\|Ga0318547_10033805	Not Available	2653	Open in IMG/M
3300031792\|Ga0318529_10300649	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	747	Open in IMG/M
3300031796\|Ga0318576_10004798	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	4577	Open in IMG/M
3300031805\|Ga0318497_10238514	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1008	Open in IMG/M
3300031805\|Ga0318497_10719999	All Organisms → cellular organisms → Bacteria → Proteobacteria	559	Open in IMG/M
3300031819\|Ga0318568_10187648	Not Available	1273	Open in IMG/M
3300031819\|Ga0318568_11026464	Not Available	509	Open in IMG/M
3300031820\|Ga0307473_10579686	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium waimense	771	Open in IMG/M
3300031846\|Ga0318512_10115115	Not Available	1275	Open in IMG/M
3300031879\|Ga0306919_10029221	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	3453	Open in IMG/M
3300031879\|Ga0306919_11491898	All Organisms → cellular organisms → Bacteria	509	Open in IMG/M
3300031890\|Ga0306925_10687090	All Organisms → cellular organisms → Bacteria	1072	Open in IMG/M
3300031890\|Ga0306925_11725165	Not Available	603	Open in IMG/M
3300031896\|Ga0318551_10418462	Not Available	763	Open in IMG/M
3300031896\|Ga0318551_10638868	All Organisms → cellular organisms → Bacteria	615	Open in IMG/M
3300031897\|Ga0318520_10553974	Not Available	713	Open in IMG/M
3300031910\|Ga0306923_10439697	Not Available	1480	Open in IMG/M
3300031912\|Ga0306921_10020622	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	7226	Open in IMG/M
3300031912\|Ga0306921_10565629	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1317	Open in IMG/M
3300031912\|Ga0306921_11716421	Not Available	678	Open in IMG/M
3300031912\|Ga0306921_12258878	Not Available	572	Open in IMG/M
3300031941\|Ga0310912_10293097	Not Available	1258	Open in IMG/M
3300031941\|Ga0310912_10424072	Not Available	1036	Open in IMG/M
3300031941\|Ga0310912_11029280	Not Available	631	Open in IMG/M
3300031942\|Ga0310916_10544699	Not Available	988	Open in IMG/M
3300031945\|Ga0310913_10141770	Not Available	1655	Open in IMG/M
3300031946\|Ga0310910_10421399	Not Available	1058	Open in IMG/M
3300031947\|Ga0310909_10226909	Not Available	1557	Open in IMG/M
3300031947\|Ga0310909_10423180	All Organisms → cellular organisms → Bacteria	1118	Open in IMG/M
3300031947\|Ga0310909_10487041	Not Available	1034	Open in IMG/M
3300031959\|Ga0318530_10504213	Not Available	503	Open in IMG/M
3300031962\|Ga0307479_11691876	Not Available	586	Open in IMG/M
3300032001\|Ga0306922_10004483	All Organisms → cellular organisms → Bacteria → Proteobacteria	13226	Open in IMG/M
3300032001\|Ga0306922_10013087	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	8173	Open in IMG/M
3300032009\|Ga0318563_10279937	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	902	Open in IMG/M
3300032035\|Ga0310911_10303132	All Organisms → cellular organisms → Bacteria → Proteobacteria	919	Open in IMG/M
3300032039\|Ga0318559_10055213	All Organisms → cellular organisms → Bacteria	1674	Open in IMG/M
3300032039\|Ga0318559_10140054	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodovastum → Rhodovastum atsumiense	1094	Open in IMG/M
3300032041\|Ga0318549_10061428	Not Available	1575	Open in IMG/M
3300032051\|Ga0318532_10090012	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1078	Open in IMG/M
3300032052\|Ga0318506_10318893	Not Available	689	Open in IMG/M
3300032059\|Ga0318533_10790772	Not Available	696	Open in IMG/M
3300032060\|Ga0318505_10296254	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	763	Open in IMG/M
3300032063\|Ga0318504_10199658	All Organisms → cellular organisms → Bacteria → Proteobacteria	933	Open in IMG/M
3300032076\|Ga0306924_10138866	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2777	Open in IMG/M
3300032091\|Ga0318577_10449288	Not Available	615	Open in IMG/M
3300032180\|Ga0307471_102790496	Not Available	620	Open in IMG/M
3300032261\|Ga0306920_101472390	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	973	Open in IMG/M
3300033289\|Ga0310914_11335721	Not Available	619	Open in IMG/M
3300033289\|Ga0310914_11819835	Not Available	513	Open in IMG/M
3300033290\|Ga0318519_10855730	Not Available	561	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.43%
Host-Associated	Host-Associated	3.57%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	93.57%
Aquatic	Environmental → Aquatic	2.86%
Plants	Host-Associated → Plants	2.86%
Fungi	Host-Associated → Fungi	0.71%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	93.57%
Freshwater	Environmental → Aquatic → Freshwater	2.14%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.14%
Sediment	Environmental → Aquatic → Sediment	0.71%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.71%
Mycelium	Host-Associated → Fungi → Mycelium	0.71%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	85.00%
Loam	Environmental → Terrestrial → Soil → Loam	8.57%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.14%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.14%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.71%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.71%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	0.71%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	80.00%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.29%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.29%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	2.86%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.14%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.43%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.43%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.71%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.71%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.71%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.71%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	0.71%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	51.43%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	25.71%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.57%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.86%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.14%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.43%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.43%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.43%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.43%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.43%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.71%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.71%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.71%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.71%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.71%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.71%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.71%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.71%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	0.71%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.71%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001545	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300011392	Attine ant fungus gardens microbial communities from North Carolina, USA - TSNC071 MetaG	Host-Associated	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021358	Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3	Host-Associated	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12630J15595_100439021	3300001545	Forest Soil	MPSSATRTFTDPDMYFAGIRNLQIDGVITKRGEFRAESTHIDLQPVKSVISA*
Ga0066388_1031791072	3300005332	Tropical Forest Soil	MPSSAVLTFTNPEAYFGGIRNLQIDGLVVQRGKFRAELTRIDLHRLFMCGFKETCLGS*
Ga0008090_102673191	3300005363	Tropical Rainforest Soil	MPSSAVRTFTDPDEYFAGIRNLRIDGLLLQCGEFRAETTRIDLHRL
Ga0070694_1003646713	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MPSSATRTFTDPDTYFAGIRNLQIDGVVTKRGDFRVKSTRIDLHRLW
Ga0070707_1015272542	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MPSSATRSFTDPDVYFAGIRNLQIDGVITKRGEFRAESTHIDLHRLFMYRSDE
Ga0070763_104459783	3300005610	Soil	MPSSATWTFTDPDTYFAGIRNLQIDGVVTKRGDFRVGSTRIDLHRLWMHRFD
Ga0070716_1014493651	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MGPDHQGVGMPFSATRTFADPDVYFAGIRNLQIDGVITKRGEFRAE
Ga0075021_109941621	3300006354	Watersheds	MPSSAIRSFTDPDMYFAGIRNLQIDGVITKRGEFRAESTHIDLHRLF
Ga0079221_102085951	3300006804	Agricultural Soil	MPSSATRTFTDPDMYFAGIRNLQIDGVIAKRGEFRA
Ga0075433_114968052	3300006852	Populus Rhizosphere	MPSSATRTFTDPDMYFEGIRNLQIDGVVTSRGDFRVKATRIDLHRLWMHRF
Ga0079219_109742322	3300006954	Agricultural Soil	MPSSAIRTFTDPDMYFAGIRNLQIDGVITKRGEFRAESTHI
Ga0105241_126775351	3300009174	Corn Rhizosphere	MPSSATRTFTERDMYFAGIRNLQIDGVITKRGDFRAESTRIDLHRLWMHRFDE
Ga0126379_100414713	3300010366	Tropical Forest Soil	MPSITVRTFADPDAYFAGIRNLPIDGLVTERGKFRAEATLIDLRRLQ
Ga0153987_10038363	3300011392	Attine Ant Fungus Gardens	MPSSAIRTFIDPDMYFAEIRNLQIDGVITKRGEFRAESTHIDLHRLFMYRSDES
Ga0164300_106072811	3300012951	Soil	MTQGVGMPSSAIRTFIDPDMYFAGIRNLQIDGVITKRG
Ga0132255_1056896061	3300015374	Arabidopsis Rhizosphere	MGRDHPGVGMPSSATRAFADPDMYFAGIRNLQIDGVITKRGEFRAESTRIDLHRLWM
Ga0182036_100823231	3300016270	Soil	MPSSVVRTFTDPDAYFAGIRNLQIEGVVLRRGEFQAESTRIDLHRLWMHRFD
Ga0182036_110859011	3300016270	Soil	MPSSAVRTFTDPDEYFAGIRNLPTEGVVLRRGEFRAESARIDLH
Ga0182036_118200161	3300016270	Soil	MPSSAVRKFTEPDEYFAGIRNLQIAGLVTQCGEFLAESTRIDLH
Ga0182041_100167696	3300016294	Soil	MPSSTVRAFVDPDEYFTGIRNLQIEGVVLQRGEFHAESTIIDLPRVLMCRFDENL
Ga0182041_117525811	3300016294	Soil	MPWSTVRAFTDPDEYFAGIRNLQIEGVVLQRGEVHAEATIIDLPRVLMCRFNE
Ga0182033_100687425	3300016319	Soil	MPSSAVRIFTDPDEYFAGIRNLQIDGLVLQQGKFRAASMRIDL
Ga0182033_102459841	3300016319	Soil	MPWSAVRRFADPDAFFASIRNLQIEGLVQRRGEFGARSTRIDLH
Ga0182033_109782521	3300016319	Soil	MPSSAVRRFTDPDEYFAGIRNLQIKGLVLQPSEFRAESTHIDLHR
Ga0182033_110071163	3300016319	Soil	MPSSAVHTFTDPDAYFSRIRHMPTEGVVLQRGEFRAESALIDLHRLLMYR
Ga0182033_113617491	3300016319	Soil	MPSSAVLTFTDPDEYFARIRNLPIEGLVLQRGEFRAESTHIDLH
Ga0182035_100182171	3300016341	Soil	MPSTAVQTFTDPDAYFAGIRNLQIDGFVAGRGEFRAVST
Ga0182035_100533621	3300016341	Soil	MPSSVVRTFTDPDAYFAGIRNLQIEGVVLRRGEFHAEST
Ga0182032_108043433	3300016357	Soil	MPCSALRRFADPDAFFASIRNLQIEGLVERRGEFRA
Ga0182032_112954992	3300016357	Soil	MPWSAVRRFADPDAFFASIRNLQIEGLVQRRGEFGAR
Ga0182034_108253881	3300016371	Soil	MPASAVRAFTDPDAYFAGIRNLQIDGLVLRHGKFW
Ga0182040_101108891	3300016387	Soil	MPSSTVRAFVDPDEYFTGIRNLQIEGVVLQRGEFHAESTIIDLPRVLMC
Ga0182037_111740571	3300016404	Soil	MPSSAVHTFTDPDAYFSRIRHMPTEGVVLQRGEFRAESALIDLH
Ga0182037_115018422	3300016404	Soil	MPSSAIRLFTDPDVYFGGIRNLPIEGLVLRRGEFCAQSTHIDLHRLCMYRADENLP
Ga0187801_101333501	3300017933	Freshwater Sediment	MPTSATRTFTDPEMYFAGIRNLQIDGVITKRGEFRAESTRIDLHRLW
Ga0187808_102192291	3300017942	Freshwater Sediment	MPSSATRTFTDHEMYFAGIRNLQIDGVITKRGEFRAEATHIDLHRLFMYRSDEA
Ga0210407_112814181	3300020579	Soil	MPSSTTRTFTDPDLYFAGIRNLQIDGVITKRGEFRAE
Ga0210403_109901761	3300020580	Soil	MPSSATRTFTDPDIYFAGIRSLQIDGVITKRGEFRADRRASTCT
Ga0210399_101875534	3300020581	Soil	MPSSAVRSFADPDMYFAGIRNLQIDGVITKRGEFRAESTHIDLQRLFL
Ga0210401_107280012	3300020583	Soil	MPSSVIHTFIDPDMYFAGIRNLQINGVITKLGQFRAASTHIDLHRLL
Ga0210404_101443802	3300021088	Soil	MPSSATRSFTDPDMYFAGIRNLQIDGVITKRGEFR
Ga0210404_106235581	3300021088	Soil	MPFSATRTFADPDVYFAGIRNLQIDGVITKRGEFRAEATRID
Ga0210406_110381441	3300021168	Soil	MPSSAIRTFIDPDMYFAGIRNLRIDGVITKRGGFRAD
Ga0210405_104778981	3300021171	Soil	MPSSAIRTFIEPDMYFAEIRNLQIDGVITKRGEFRAVSTHIDLHRLFMYRS
Ga0210408_109076941	3300021178	Soil	MPSSAVGSFTDPEIYFAGIRNLQIDGVITKRGEFRAESTHIDLHR
Ga0210408_111085861	3300021178	Soil	MPSSATRTFTEPDMYFAGIRNLQIDGVITKRGDFRAES
Ga0210396_111864381	3300021180	Soil	MPSSATRTFTDPEMYFAGIRNLRIDGVITKCGEFRAESTHINLHRLFMYRSDES
Ga0213873_100235533	3300021358	Rhizosphere	MPSSAVRTFTDPDAYFGGIRNLQVDGVVIRRGNFHAEATRIDLHRLWMHRFDE
Ga0210389_104168631	3300021404	Soil	MPSSATRTFTDPDMYFAGIRNLQIDGVITKRGEFRAES
Ga0210387_105309052	3300021405	Soil	MPSSATRTFTDPDMYFAGIRNLQIDGVITKRGKFRAESTRIDLHRLWMHRFDEDL
Ga0210387_116548021	3300021405	Soil	MPSSATRTFTDPDMYFAGIRNLQIDGVITKRGEIPRGV
Ga0210384_118255561	3300021432	Soil	MPSSAVRSFADPDMYFAGIRNLQIDGVITKRGEFRAESTHIDLHRLFIYRS
Ga0210390_100429595	3300021474	Soil	MPSSATRTFTDPEMYFAGIRNLRIDGVITKCGEFRAESTHIDLHR
Ga0210402_113427372	3300021478	Soil	MPSSATRIFTDPDLYFSGIRNLQIDGVITKRGEFRADSARIDLHRLWM
Ga0126371_101972295	3300021560	Tropical Forest Soil	MPSSTVRTFTDPDAYFAGIRNLAIDGLVTERGKFRAE
Ga0207684_110499732	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MPSSATRTFTDPDMYFAGIRNLQIDGVITKRGEFRAASTHIDL
Ga0207664_108326832	3300025929	Agricultural Soil	MPSSAIHTFIDPDMYFAGIRNLQINGVITKLGQFRAASTHIDLHRLLMYRSDESLP
Ga0207665_100807693	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MPSSATRTFTEPDMYFAGIRNLQIDGVITKRGDFRAESTRIDLHR
Ga0209656_101481911	3300027812	Bog Forest Soil	MPSSAIRTFIDPDMYFAGIRNLQIDGVITKRGDFRA
Ga0209275_107024713	3300027884	Soil	MPSSAVRTFTDPDAYFAGIRNLSIDGLVTERGKFRAEATL
Ga0209526_101485582	3300028047	Forest Soil	MPSSATRTFTDPDMYFAGIRNLQIDGVITKRGEFRAESTHIDLQPVKSVISA
Ga0308309_107079481	3300028906	Soil	MPSSATRTFTDPDMYFAGIRNLQIDGVITKRGGFRADSTHIDLHRLFMYRSDESLPRIMK
Ga0318516_103382881	3300031543	Soil	MPSTAVQTFTDPDAYFAGIRNLQIDGFVAGRGEFRAVSTRIDLHRLWMY
Ga0318541_101983341	3300031545	Soil	MPSSAVRTFTDPDEYFAGIRNLQIEGFVARGEFRAELTRVDLHRLFMC
Ga0318541_102720411	3300031545	Soil	MPSSAVRIFTDPDEYFAGIRNLQIDGLVLQQGKFRAASMRID
Ga0310915_100135621	3300031573	Soil	MLSSAVRAFTDPDAYFAGIRNLQIDGFVAGRGEFRAVSTRIDLHRLWMY
Ga0310915_101249773	3300031573	Soil	MPWSAVRRFADPDAFFASIRNLQIDGLVERRGHFRAESTRI
Ga0310915_102260951	3300031573	Soil	MPSIAVRTFTDPVEYFAGIRNLQIDGFVVGRGEFC
Ga0310915_104505953	3300031573	Soil	MPSSTVRAFAGPDEYFAGIRNLQIEGVVLQRGEFHAEATIIDLPRVLMCRFD
Ga0318542_101881762	3300031668	Soil	MPSSVVRTFTDPDAYFAGIRNLQIDGLVLRPGEFHAESTRID
Ga0318561_100250661	3300031679	Soil	MPSSAVRAFTDPDAYFAGIRNLQIDGFVAGRGEFRAVSTR
Ga0318574_107559422	3300031680	Soil	MPSSAVRTFTDPDEYFAGIRNLQIEGFVARGEFRAELT
Ga0318572_109629101	3300031681	Soil	MPSSAVRTFTDPDAYFAGIRNLQIEGLVLQRGEFRAE
Ga0310686_1028454521	3300031708	Soil	MPSSAARTFTDPEKYFAGIRNLQIDGVITKRGEFRAE
Ga0306917_100156573	3300031719	Soil	MRSSAVRTFTDFDEYFAGIRNLQVEGLLPRHSEFRVEATRIDR
Ga0306917_104151462	3300031719	Soil	MPSSAVLTFTDPDEYFARIRNLPIEGLVLQRGEFRAESTHID
Ga0306917_106015521	3300031719	Soil	MPSSTVRAFVDPDEYFAGIRNLQIEGVVLQRGEFHAESTIIDLPRVLMCRFDENL
Ga0318501_102737901	3300031736	Soil	MPSSAVRTFTDPDEYFAGIRNLQIEGLVAGGEFRAELTRIDLHRLFMCRFD
Ga0318501_105880832	3300031736	Soil	MPLSLVRTFTDPDAYFAFAGIRNRQIDGLVLRRGEFHAETTRIDLHQLVMHRFD
Ga0306918_100389311	3300031744	Soil	MPSSAVRAFTDPDAYFAGIRNLQIDGFVAGRGEFRAVSTRIDLHRLW
Ga0306918_107252871	3300031744	Soil	MRSSAVRTFTDFDEYFAGIRNLQVEGLLPRHSEFRVEATR
Ga0318494_105392481	3300031751	Soil	MPASAVRTFTDPDEYFAGIRNLQIEGVVARGEFRAELTRIDLHR
Ga0307477_101724173	3300031753	Hardwood Forest Soil	MPSSAVGSFTDPEIYFAGIRNLQIAGVITKRGEFRAESTHIDLHRLFMYRS
Ga0318537_101326931	3300031763	Soil	MPSSAARTFTDPDEYFAGIRNLQIEGVVARGEFRAELTRID
Ga0318537_103069901	3300031763	Soil	MPSSTVRTFTDPVAYFTGIRNLQIVGLVRQRGAFRATLTRIDLPRVLMCRFDENLPRIMKVT
Ga0318509_100481751	3300031768	Soil	MPSSVVRTFTDPDAYFAGIRNLQIDGLVLRPGEFHAESTRIDLHRLFMHRFA
Ga0318509_101046874	3300031768	Soil	MPSTAVQTFTDPDAYFAGIRNLQIDGFVAGRGEFR
Ga0318509_107189572	3300031768	Soil	MPSSTVRAFVDPDEYFTGIRNLQIEGVVLQRGEFHAESTIIDLPRVLMCR
Ga0318546_111067222	3300031771	Soil	MPSSAVRIFTDPDAYFAAVRNLQIDALITHRGEFRAELTRIDLHRL
Ga0318547_100338051	3300031781	Soil	MPSTAVQTFTDPDAYFAGIRNLQIDGLVLRHGKFWAKSTRIDLHRLWMHR
Ga0318529_103006491	3300031792	Soil	MPSSAVRTFTDPDAYFAGIRNLRIEGLVLQRGEFRAESTHID
Ga0318576_100047987	3300031796	Soil	MPSTAVQTFTDPDAYFAGIRNLQIDGFVAGRGEFRAV
Ga0318497_102385141	3300031805	Soil	MPSSVVRTFTDPDAYFAGIRNLQIDGLVLRPGEFHAESTRIDLHRLFMH
Ga0318497_107199991	3300031805	Soil	MPSIAVRTFTDPVEYFAGIRNLQIDGFARRGKFCAKSTRIDLH
Ga0318568_101876481	3300031819	Soil	MRSSAVRTFTDFDEYFAGIRNLQVEGLLPRHSEFRVEATRID
Ga0318568_110264642	3300031819	Soil	MPSSVVRTFTDPDAYFAGIRNLQIEAVVLRRGEFHAEATRIDLHRLW
Ga0307473_105796861	3300031820	Hardwood Forest Soil	MPSSATRTFTDPDLYFAGIRNLQIDGVITKRGEFRAESTR
Ga0318512_101151154	3300031846	Soil	MPSTAVQTFTDPDAYFAGIRNLQIDGFVAGRGEFRAVSTRIDLHRLW
Ga0306919_100292211	3300031879	Soil	MPSTAVQTFTDPDAYFAGIRNLQIDGFVAGRGEFRAVSTR
Ga0306919_114918982	3300031879	Soil	MPSSAVRTFTDPDEYFAGIRNLQIEGLVARGEFRAELTR
Ga0306925_106870901	3300031890	Soil	MPWSAIRRFADPDAFFASIRNLQIEGLVERRGEFRAEST
Ga0306925_117251651	3300031890	Soil	MPCSALRRFADPDAFFASIRNLQIEGLVERRGEFRAEST
Ga0318551_104184622	3300031896	Soil	MPWSAVRRFADPDAFFASIRNLQIDGLVERRGHFRAESTRIDLHRLWMHRFDETL
Ga0318551_106388681	3300031896	Soil	MPSSAVRTFTDPDEYFAGIRNLQIEGFVARGEFRAELTRVDLHRLF
Ga0318520_105539742	3300031897	Soil	MPSSTVRAFAGPDEYFAGIRNLQIEGVVLQRGEFHAEATIIDLPRVL
Ga0306923_104396974	3300031910	Soil	MPSTAVQTFTDPDAYFAGIRNLQIDGFVAGRGEFRA
Ga0306921_100206221	3300031912	Soil	MPSSAVRAFTDPDAYFAGIRNLQIDGFVAGRGEFRAVSTRIDLHRLWMY
Ga0306921_105656291	3300031912	Soil	MPSIAVRTFTDPVEYFAGIRNLQIDGFVVGRGEFCAKSTR
Ga0306921_117164211	3300031912	Soil	MPSSAVRTFTDPDAYFAGIRNLPIEGVVLRRASSAPTR
Ga0306921_122588781	3300031912	Soil	MPSSAVRTFTDPDAYFAGIRILRIDDLVTRRGEFRAKSTR
Ga0310912_102930971	3300031941	Soil	MPCSALRRFADPDAFFASIRNLQIEGLVERRGEFRAESTR
Ga0310912_104240721	3300031941	Soil	MPWSAIRRFADPDAFFASIRNLQIEGLVERRGEFRAESTRIDL
Ga0310912_110292802	3300031941	Soil	MPWSTVRAFTDPDEYFAGIRNLQIEGVVLQRGEFHAEATIIDLPRVLM
Ga0310916_105446991	3300031942	Soil	MTELVMPSSLVRTYTDPDAYFADIRNLEIEGLVVQRGSFRAE
Ga0310913_101417702	3300031945	Soil	MPSSAVRTFTDPDAYFSAIRNLQIEGLVVRPGEFRAESTRIDLHRLFMC
Ga0310910_104213991	3300031946	Soil	MPSSAVRTFTDPDEYFAGIRNLQIEGVVARGEFRAELTRID
Ga0310909_102269093	3300031947	Soil	MPCSALRRFADPDAFFASIRNLQIEGLVERRGEFRAESTRID
Ga0310909_104231801	3300031947	Soil	MPSSTVRAFTDPDAYFAGIRNLQIDGFVAGRGEFCAVSTRIDLH
Ga0310909_104870411	3300031947	Soil	MPSSTVRAFAGPDEYFAGIRNLQIEGVVLQRGEFHAEATIIDLPRVLMCR
Ga0318530_105042131	3300031959	Soil	MPSSTVRTFTDPVAYFTGIRNLQIVGLVRQRGAFRATSTRIDLPRVLMCRFDENLPRIMKVT
Ga0307479_116918761	3300031962	Hardwood Forest Soil	MPSSATRTFTEPDMYFAGIRNLQIDGVITKRGDFRAESTRIDLHRLWMHRFDERLPRI
Ga0306922_100044831	3300032001	Soil	MLSSAVRAFTDPDAYFAGIRNLQIDGFVAGRGEFRAVSTRIDLH
Ga0306922_100130877	3300032001	Soil	MPSSAVRAFTDPDAYFAGIRNLQIDGFVAGRGEFRAVSTRIDLH
Ga0318563_102799373	3300032009	Soil	MPSIAVRTFTDPVEYFAGIRNLQINGFVVRRGKFCAKYT
Ga0310911_103031321	3300032035	Soil	MPSSAVRAFTDPDAYFAGIRNLQIDGFVAGRGEFRAVSTRI
Ga0318559_100552131	3300032039	Soil	MPSSAVRAFTDPDAYFAGIRNLQIDGFVAGRGEFRAVSTRIDL
Ga0318559_101400541	3300032039	Soil	MPSSVVRTFTDPDAYFAGIRNLQIEGVVLRRGEFQAESTRIDLHRLW
Ga0318549_100614281	3300032041	Soil	MPSTAVQTFTDPDAYFAGIRNLQIDGLVLRHGKFWAKSTRIDLH
Ga0318532_100900121	3300032051	Soil	MPSSVVRTFTDPDAYFAGIRNLQIDGLVLRPGEFHAESTRIDLH
Ga0318506_103188931	3300032052	Soil	MRSSAVRTFTDFDEYFAGIRNLQVEGLLPRHSEFRVEA
Ga0318533_107907721	3300032059	Soil	MPSSAVHTFTDPDAYFARIRHMPIEGVVLQRGEFRAESALIDLHRLLMY
Ga0318505_102962541	3300032060	Soil	MPSSAVRTFTDPDEYFAGIRNLQIEGLVLQRGEFRAESTRIDLHRLFLCR
Ga0318504_101996581	3300032063	Soil	MPSSAVRAFTDPDAYFAGIRNLQIDGFVAGRGEFR
Ga0306924_101388664	3300032076	Soil	MPSSTVRAFTDPDEYFAGIRNLQIEGVVLQRGEFRATS
Ga0318577_104492882	3300032091	Soil	MPSSTVRAFAGPDEYFAGIRNLQIEGVVLQRGEFHAEATIIDLPRVLM
Ga0307471_1027904961	3300032180	Hardwood Forest Soil	MPSSATRTFTEPDMYFAGIRNLQIDGVITKRGDFRAESTRID
Ga0306920_1014723902	3300032261	Soil	MPSSTVRGFTDPDEYFAGIRNLQIEGVVLQRGEFSA
Ga0310914_113357211	3300033289	Soil	MPSSTVRAFAGPDEYFAGIRNLQIEGVVLQRGEFHA
Ga0310914_118198351	3300033289	Soil	MPSSAVHTFTDPDAYFARIRHMPIEGVVLQRGQFRAASTLIDLHRLL
Ga0318519_108557301	3300033290	Soil	MPSSAIGLFTDPDVYFGGIRNLPIEGLVLRRGEFCAQSTHIDLHRLYMYRADENLP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F054261

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences