Metagenome / Metatranscriptome Family F054236

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F054236
Family Type	Metagenome / Metatranscriptome
Number of Sequences	140
Average Sequence Length	40 residues
Representative Sequence	MGHEERFPPTRLSAGCGFRKETIAGMRRNGRDAPI
Number of Associated Samples	98
Number of Associated Scaffolds	140

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	40.94 %
% of genes near scaffold ends (potentially truncated)	82.86 %
% of genes from short scaffolds (< 2000 bps)	83.57 %
Associated GOLD sequencing projects	92
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.14

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (60.714 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (47.857 % of family members)
Environment Ontology (ENVO)	Unclassified (43.571 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (54.286 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 0.00% Coil/Unstructured: 100.00%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.14
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.14
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 140 Family Scaffolds
PF08546	ApbA_C	4.29
PF04392	ABC_sub_bind	2.86
PF00903	Glyoxalase	2.86
PF00211	Guanylate_cyc	2.86
PF07969	Amidohydro_3	2.14
PF04828	GFA	2.14
PF13751	DDE_Tnp_1_6	2.14
PF00536	SAM_1	2.14
PF08241	Methyltransf_11	1.43
PF13495	Phage_int_SAM_4	1.43
PF03466	LysR_substrate	1.43
PF10518	TAT_signal	1.43
PF00589	Phage_integrase	1.43
PF08388	GIIM	1.43
PF07647	SAM_2	1.43
PF04632	FUSC	1.43
PF14234	DUF4336	1.43
PF00248	Aldo_ket_red	0.71
PF07885	Ion_trans_2	0.71
PF13185	GAF_2	0.71
PF01638	HxlR	0.71
PF03092	BT1	0.71
PF01027	Bax1-I	0.71
PF13416	SBP_bac_8	0.71
PF06468	Spond_N	0.71
PF16655	PhoD_N	0.71
PF00797	Acetyltransf_2	0.71
PF07719	TPR_2	0.71
PF13424	TPR_12	0.71
PF13599	Pentapeptide_4	0.71
PF12840	HTH_20	0.71
PF02518	HATPase_c	0.71
PF07690	MFS_1	0.71
PF10009	DUF2252	0.71
PF02558	ApbA	0.71
PF12833	HTH_18	0.71
PF02771	Acyl-CoA_dh_N	0.71
PF00072	Response_reg	0.71
PF03976	PPK2	0.71
PF08028	Acyl-CoA_dh_2	0.71
PF13432	TPR_16	0.71
PF06411	HdeA	0.71
PF12680	SnoaL_2	0.71
PF01738	DLH	0.71
PF03060	NMO	0.71
PF13586	DDE_Tnp_1_2	0.71
PF08031	BBE	0.71
PF00486	Trans_reg_C	0.71
PF01117	Aerolysin	0.71
PF08818	DUF1801	0.71
PF11149	DUF2924	0.71
PF14559	TPR_19	0.71
PF00924	MS_channel	0.71
PF13714	PEP_mutase	0.71
PF02630	SCO1-SenC	0.71
PF00355	Rieske	0.71

COG ID	Name	Functional Category	% Frequency in 140 Family Scaffolds
COG1893	Ketopantoate reductase	Coenzyme transport and metabolism [H]	4.29
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	2.86
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	2.86
COG3791	Uncharacterized conserved protein	Function unknown [S]	2.14
COG1289	Uncharacterized membrane protein YccC	Function unknown [S]	1.43
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	1.43
COG2070	NAD(P)H-dependent flavin oxidoreductase YrpB, nitropropane dioxygenase family	General function prediction only [R]	0.71
COG5649	Uncharacterized conserved protein, DUF1801 domain	Function unknown [S]	0.71
COG5646	Iron-binding protein Fra/YdhG, frataxin family (Fe-S cluster biosynthesis)	Posttranslational modification, protein turnover, chaperones [O]	0.71
COG4430	Uncharacterized conserved protein YdeI, YjbR/CyaY-like superfamily, DUF1801 family	Function unknown [S]	0.71
COG3264	Small-conductance mechanosensitive channel MscK	Cell wall/membrane/envelope biogenesis [M]	0.71
COG2326	Polyphosphate kinase 2, PPK2 family	Energy production and conversion [C]	0.71
COG2162	Arylamine N-acetyltransferase	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.71
COG0277	FAD/FMN-containing lactate dehydrogenase/glycolate oxidase	Energy production and conversion [C]	0.71
COG1999	Cytochrome oxidase Cu insertion factor, SCO1/SenC/PrrC family	Posttranslational modification, protein turnover, chaperones [O]	0.71
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	0.71
COG1225	Peroxiredoxin	Posttranslational modification, protein turnover, chaperones [O]	0.71
COG0668	Small-conductance mechanosensitive channel	Cell wall/membrane/envelope biogenesis [M]	0.71
COG0516	IMP dehydrogenase/GMP reductase	Nucleotide transport and metabolism [F]	0.71

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	60.71 %
Unclassified	root	N/A	39.29 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	60.71 %
Unclassified	root	N/A	39.29 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	60.71 %
Unclassified	root	N/A	39.29 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.29 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	35.00 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → environmental samples	1.43 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.71 %
unclassified Bacteria	no rank	All Organisms → cellular organisms → Bacteria → unclassified Bacteria	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.29 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	25.71 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1.43 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.71 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.71 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.71 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.71 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.29 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6.43 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	6.43 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2.86 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1.43 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.71 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	0.71 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.71 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.71 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.29 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	6.43 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2.14 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	1.43 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1.43 %
Reyranellaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Reyranellaceae	0.71 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.71 %
Desulfobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales	0.71 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.71 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.71 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.29 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	6.43 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.43 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1.43 %
Sediminicoccus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Sediminicoccus	0.71 %
Reyranella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Reyranellaceae → Reyranella	0.71 %
Desulfobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	0.71 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.71 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.71 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.71 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.29 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	6.43 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1.43 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.71 %
unclassified Reyranella	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Reyranellaceae → Reyranella → unclassified Reyranella	0.71 %
Bradyrhizobium guangdongense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium guangdongense	0.71 %
Desulfatitalea	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfatitalea	0.71 %
Sediminicoccus rosea	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Sediminicoccus → Sediminicoccus rosea	0.71 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.71 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.71 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.71 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.29 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	6.43 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1.43 %
unclassified Desulfatitalea	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfatitalea → unclassified Desulfatitalea	0.71 %
Reyranella sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Reyranellaceae → Reyranella → unclassified Reyranella → Reyranella sp.	0.71 %
Bradyrhizobium sp. Ai1a-2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Ai1a-2	0.71 %
Bradyrhizobium guangdongense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium guangdongense	0.71 %
Sediminicoccus rosea	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Sediminicoccus → Sediminicoccus rosea	0.71 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.71 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.71 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.71 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.29 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	6.43 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1.43 %
Desulfatitalea sp. M08but	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfatitalea → unclassified Desulfatitalea → Desulfatitalea sp. M08but	0.71 %
Reyranella sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Reyranellaceae → Reyranella → unclassified Reyranella → Reyranella sp.	0.71 %
Bradyrhizobium sp. Ai1a-2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Ai1a-2	0.71 %
Bradyrhizobium guangdongense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium guangdongense	0.71 %
Sediminicoccus rosea	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Sediminicoccus → Sediminicoccus rosea	0.71 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.71 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.71 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.71 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.71 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2189573004\|GZGWRS401DIO56	All Organisms → cellular organisms → Bacteria → Proteobacteria	505	Open in IMG/M
3300005436\|Ga0070713_100188194	All Organisms → cellular organisms → Bacteria	1859	Open in IMG/M
3300005560\|Ga0066670_10926674	All Organisms → cellular organisms → Bacteria	530	Open in IMG/M
3300005610\|Ga0070763_10098908	Not Available	1468	Open in IMG/M
3300006057\|Ga0075026_100447577	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	735	Open in IMG/M
3300006162\|Ga0075030_101165405	All Organisms → cellular organisms → Bacteria	606	Open in IMG/M
3300006175\|Ga0070712_100093217	All Organisms → cellular organisms → Bacteria	2210	Open in IMG/M
3300006175\|Ga0070712_101933904	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	516	Open in IMG/M
3300006176\|Ga0070765_100405233	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1273	Open in IMG/M
3300006176\|Ga0070765_101020460	All Organisms → cellular organisms → Bacteria	782	Open in IMG/M
3300006914\|Ga0075436_101076590	All Organisms → cellular organisms → Bacteria → Proteobacteria	605	Open in IMG/M
3300009792\|Ga0126374_11841493	Not Available	507	Open in IMG/M
3300010046\|Ga0126384_11004295	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Reyranellaceae → Reyranella → unclassified Reyranella → Reyranella sp.	760	Open in IMG/M
3300010047\|Ga0126382_10061030	All Organisms → cellular organisms → Bacteria	2263	Open in IMG/M
3300010162\|Ga0131853_10438404	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1225	Open in IMG/M
3300010361\|Ga0126378_11722517	Not Available	712	Open in IMG/M
3300010376\|Ga0126381_104961266	Not Available	511	Open in IMG/M
3300010398\|Ga0126383_10172477	Not Available	2045	Open in IMG/M
3300011120\|Ga0150983_14153650	Not Available	653	Open in IMG/M
3300012362\|Ga0137361_10204464	All Organisms → cellular organisms → Bacteria	1787	Open in IMG/M
3300012971\|Ga0126369_10462215	All Organisms → cellular organisms → Bacteria → Proteobacteria	1320	Open in IMG/M
3300016294\|Ga0182041_10170569	All Organisms → cellular organisms → Bacteria	1702	Open in IMG/M
3300016294\|Ga0182041_11123655	Not Available	714	Open in IMG/M
3300016341\|Ga0182035_11556663	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	596	Open in IMG/M
3300016371\|Ga0182034_10186072	Not Available	1594	Open in IMG/M
3300016371\|Ga0182034_11516347	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	587	Open in IMG/M
3300016387\|Ga0182040_11689283	All Organisms → cellular organisms → Bacteria	540	Open in IMG/M
3300016404\|Ga0182037_10601847	All Organisms → cellular organisms → Bacteria	933	Open in IMG/M
3300016422\|Ga0182039_11476840	Not Available	619	Open in IMG/M
3300016445\|Ga0182038_10172490	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1675	Open in IMG/M
3300016445\|Ga0182038_12030329	Not Available	521	Open in IMG/M
3300020579\|Ga0210407_10073458	Not Available	2570	Open in IMG/M
3300020579\|Ga0210407_11099527	Not Available	602	Open in IMG/M
3300020580\|Ga0210403_11278546	Not Available	561	Open in IMG/M
3300020580\|Ga0210403_11283135	All Organisms → cellular organisms → Bacteria → Proteobacteria	560	Open in IMG/M
3300020581\|Ga0210399_10204335	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1643	Open in IMG/M
3300020581\|Ga0210399_10433752	Not Available	1095	Open in IMG/M
3300020583\|Ga0210401_10401393	All Organisms → cellular organisms → Bacteria	1233	Open in IMG/M
3300021088\|Ga0210404_10395154	All Organisms → cellular organisms → Bacteria	772	Open in IMG/M
3300021168\|Ga0210406_10279529	All Organisms → cellular organisms → Bacteria	1362	Open in IMG/M
3300021170\|Ga0210400_10467775	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1040	Open in IMG/M
3300021170\|Ga0210400_10819302	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	762	Open in IMG/M
3300021170\|Ga0210400_11588985	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	516	Open in IMG/M
3300021178\|Ga0210408_10417146	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1069	Open in IMG/M
3300021178\|Ga0210408_10697815	Not Available	799	Open in IMG/M
3300021180\|Ga0210396_10256160	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1555	Open in IMG/M
3300021180\|Ga0210396_10416127	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1181	Open in IMG/M
3300021405\|Ga0210387_10640421	All Organisms → cellular organisms → Bacteria	944	Open in IMG/M
3300021406\|Ga0210386_10602234	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	949	Open in IMG/M
3300021406\|Ga0210386_11668958	Not Available	527	Open in IMG/M
3300021407\|Ga0210383_10766272	Not Available	827	Open in IMG/M
3300021475\|Ga0210392_10957438	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	641	Open in IMG/M
3300021475\|Ga0210392_11126313	Not Available	588	Open in IMG/M
3300021478\|Ga0210402_10766458	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	889	Open in IMG/M
3300021478\|Ga0210402_11001414	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	762	Open in IMG/M
3300021478\|Ga0210402_11432425	Not Available	618	Open in IMG/M
3300022724\|Ga0242665_10307259	Not Available	557	Open in IMG/M
3300025915\|Ga0207693_10112864	All Organisms → cellular organisms → Bacteria	2132	Open in IMG/M
3300025915\|Ga0207693_11295411	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	545	Open in IMG/M
3300025916\|Ga0207663_10404774	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1044	Open in IMG/M
3300025929\|Ga0207664_10799004	All Organisms → cellular organisms → Bacteria	849	Open in IMG/M
3300026330\|Ga0209473_1288772	All Organisms → cellular organisms → Bacteria	550	Open in IMG/M
3300026508\|Ga0257161_1120917	Not Available	549	Open in IMG/M
3300026550\|Ga0209474_10093401	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2039	Open in IMG/M
3300026998\|Ga0208369_1001454	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1785	Open in IMG/M
3300026998\|Ga0208369_1001523	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Ai1a-2	1754	Open in IMG/M
3300026999\|Ga0207949_1003304	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1422	Open in IMG/M
3300027069\|Ga0208859_1003983	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1549	Open in IMG/M
3300027104\|Ga0208095_1005267	Not Available	878	Open in IMG/M
3300027874\|Ga0209465_10188903	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1027	Open in IMG/M
3300028047\|Ga0209526_10013834	All Organisms → cellular organisms → Bacteria	5584	Open in IMG/M
3300028047\|Ga0209526_10352499	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	985	Open in IMG/M
3300028047\|Ga0209526_10590783	Not Available	712	Open in IMG/M
3300028381\|Ga0268264_11576726	All Organisms → cellular organisms → Bacteria → Proteobacteria	667	Open in IMG/M
3300030967\|Ga0075399_10025406	All Organisms → cellular organisms → Bacteria	888	Open in IMG/M
3300031231\|Ga0170824_102522888	All Organisms → cellular organisms → Bacteria → Proteobacteria	556	Open in IMG/M
3300031231\|Ga0170824_111698188	All Organisms → cellular organisms → Bacteria → Proteobacteria	945	Open in IMG/M
3300031231\|Ga0170824_116108600	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	731	Open in IMG/M
3300031231\|Ga0170824_120420816	All Organisms → cellular organisms → Bacteria → Proteobacteria	977	Open in IMG/M
3300031231\|Ga0170824_126041679	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1092	Open in IMG/M
3300031446\|Ga0170820_12705989	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	984	Open in IMG/M
3300031474\|Ga0170818_106203921	All Organisms → cellular organisms → Bacteria	1037	Open in IMG/M
3300031474\|Ga0170818_108115380	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	603	Open in IMG/M
3300031543\|Ga0318516_10259756	Not Available	1004	Open in IMG/M
3300031543\|Ga0318516_10500151	All Organisms → cellular organisms → Bacteria	697	Open in IMG/M
3300031549\|Ga0318571_10363097	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	558	Open in IMG/M
3300031573\|Ga0310915_10659847	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	739	Open in IMG/M
3300031573\|Ga0310915_10694883	All Organisms → cellular organisms → Bacteria	718	Open in IMG/M
3300031680\|Ga0318574_10279506	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	968	Open in IMG/M
3300031681\|Ga0318572_10514089	Not Available	714	Open in IMG/M
3300031708\|Ga0310686_117118819	Not Available	1042	Open in IMG/M
3300031724\|Ga0318500_10081163	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1444	Open in IMG/M
3300031724\|Ga0318500_10303661	Not Available	782	Open in IMG/M
3300031724\|Ga0318500_10345166	All Organisms → cellular organisms → Bacteria	734	Open in IMG/M
3300031736\|Ga0318501_10362428	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	780	Open in IMG/M
3300031751\|Ga0318494_10652608	Not Available	615	Open in IMG/M
3300031753\|Ga0307477_10089525	All Organisms → cellular organisms → Bacteria	2136	Open in IMG/M
3300031753\|Ga0307477_10451963	All Organisms → cellular organisms → Bacteria → Proteobacteria	876	Open in IMG/M
3300031763\|Ga0318537_10247696	Not Available	661	Open in IMG/M
3300031771\|Ga0318546_10325613	All Organisms → cellular organisms → Bacteria	1067	Open in IMG/M
3300031771\|Ga0318546_10647585	Not Available	743	Open in IMG/M
3300031782\|Ga0318552_10331767	Not Available	774	Open in IMG/M
3300031819\|Ga0318568_10600815	Not Available	685	Open in IMG/M
3300031821\|Ga0318567_10374301	All Organisms → cellular organisms → Bacteria	806	Open in IMG/M
3300031832\|Ga0318499_10037548	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1773	Open in IMG/M
3300031893\|Ga0318536_10497755	All Organisms → cellular organisms → Bacteria	613	Open in IMG/M
3300031910\|Ga0306923_10056782	All Organisms → cellular organisms → Bacteria → Proteobacteria	4337	Open in IMG/M
3300031910\|Ga0306923_10138351	Not Available	2774	Open in IMG/M
3300031910\|Ga0306923_10775216	All Organisms → cellular organisms → Bacteria	1061	Open in IMG/M
3300031912\|Ga0306921_10849585	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1039	Open in IMG/M
3300031947\|Ga0310909_10747511	Not Available	810	Open in IMG/M
3300031947\|Ga0310909_11015023	Not Available	677	Open in IMG/M
3300032010\|Ga0318569_10164009	Not Available	1025	Open in IMG/M
3300032052\|Ga0318506_10082133	All Organisms → cellular organisms → Bacteria	1354	Open in IMG/M
3300032055\|Ga0318575_10163691	Not Available	1110	Open in IMG/M
3300032059\|Ga0318533_11163122	Not Available	565	Open in IMG/M
3300032076\|Ga0306924_10399130	All Organisms → cellular organisms → Bacteria	1574	Open in IMG/M
3300032076\|Ga0306924_10555052	Not Available	1303	Open in IMG/M
3300032076\|Ga0306924_10769369	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfatitalea → unclassified Desulfatitalea → Desulfatitalea sp. M08but	1076	Open in IMG/M
3300032089\|Ga0318525_10315782	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	802	Open in IMG/M
3300032094\|Ga0318540_10316508	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Sediminicoccus → Sediminicoccus rosea	753	Open in IMG/M
3300032180\|Ga0307471_100308488	Not Available	1673	Open in IMG/M
3300032180\|Ga0307471_101139275	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium guangdongense	945	Open in IMG/M
3300032261\|Ga0306920_100780633	All Organisms → cellular organisms → Bacteria	1404	Open in IMG/M
3300032261\|Ga0306920_101368536	All Organisms → cellular organisms → Bacteria	1015	Open in IMG/M
3300032261\|Ga0306920_102648041	Not Available	686	Open in IMG/M
3300032261\|Ga0306920_104281039	Not Available	513	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.86%
Host-Associated	Host-Associated	2.14%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	96.43%
Aquatic	Environmental → Aquatic	1.43%
Plants	Host-Associated → Plants	1.43%
Arthropoda	Host-Associated → Arthropoda	0.71%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	96.43%
Sediment	Environmental → Aquatic → Sediment	1.43%
Digestive System	Host-Associated → Arthropoda → Digestive System	0.71%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.71%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.71%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	82.14%
Loam	Environmental → Terrestrial → Soil → Loam	14.29%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.43%
Gut	Host-Associated → Arthropoda → Digestive System → Gut	0.71%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.71%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.71%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	72.86%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	9.29%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	7.14%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.00%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.14%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.43%
Unclassified	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified	0.71%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.71%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.71%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	47.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	16.43%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	6.43%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	5.71%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	5.00%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.29%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.14%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.14%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.43%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.71%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.71%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.71%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.71%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.71%
Termite Gut	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut	0.71%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.71%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.71%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2189573004	Grass soil microbial communities from Rothamsted Park, UK - FG2 (Nitrogen)	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010162	Labiotermes labralis P1 segment gut microbial communities from Petit-Saut dam, French Guiana - Lab288 P1 (version 2)	Host-Associated	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300022724	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026330	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133 (SPAdes)	Environmental	Open in IMG/M
3300026508	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-01-A	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300026998	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF046 (SPAdes)	Environmental	Open in IMG/M
3300026999	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF044 (SPAdes)	Environmental	Open in IMG/M
3300027069	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF002 (SPAdes)	Environmental	Open in IMG/M
3300027104	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF024 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300030967	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA11 Emin (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031832	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FG2_08298880	2189573004	Grass Soil	MSVFGHEERFPPTRLSAGCGFTKETIAGMRRNGRDAPTP
Ga0070713_1001881941	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MTQKGHEERFPPTRLSAGCGFRKETLAGMRRNGRDAPKAVT
Ga0066670_109266741	3300005560	Soil	MTAMGHEERFPPTRLSAGCGFRKETIAGMRRNGRDAPI
Ga0070763_100989082	3300005610	Soil	MSQKGHEERFPPTRLSAGCGFSQGTFAGTRGNGRDAPKA
Ga0075026_1004475771	3300006057	Watersheds	MTKKGHEERFPPTRLSVGCGFRKETIAGMRRNGRDAP
Ga0075030_1011654051	3300006162	Watersheds	MRRSAKGHEERFAPTRLSAGCGFRKETIAGMRRNG
Ga0070712_1000932171	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MTASGHEERFPPTRLNAGCGFRKETIAGMRRNGRDAP
Ga0070712_1019339041	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MTGMGHEERFPPTRLSAGCGFRKETIAGMRRNGRDA
Ga0070765_1004052331	3300006176	Soil	MGHEERFPPTRLSAGCGFRKETIAGMRRNGRDAPI
Ga0070765_1010204601	3300006176	Soil	MAAMGHNERFPPTRLSAGYGFRKETIAGMRRNGRDAP
Ga0075436_1010765901	3300006914	Populus Rhizosphere	MAASGHEEQFPPTRLSAGCGFRKETIAGMRRNGRDAP
Ga0126374_118414931	3300009792	Tropical Forest Soil	VGHDERFLLTRLSAGCSFRKETIAGVRRNGRDAPIADLPAL
Ga0126384_110042951	3300010046	Tropical Forest Soil	MAEVGREARFPPARLSGGCGFRKETIAGIRRNGRDAPK
Ga0126382_100610304	3300010047	Tropical Forest Soil	MTDVGHEDQFPPPRLSAGCGFRKETFAGAHGNGRAAPK
Ga0131853_104384042	3300010162	Termite Gut	MSQTGHEERFPLIRLSVGCGFRKETIAGKRGNDKVAP*
Ga0126378_117225172	3300010361	Tropical Forest Soil	MGHEERLPPIRLSAGYGFRKETIAGVRHNERDRTLP
Ga0126381_1049612661	3300010376	Tropical Forest Soil	MAGLGHEEWFLPPRLSGGCGFRKGMIAGMCRKGRDAPI
Ga0126383_101724771	3300010398	Tropical Forest Soil	IRRSGMGHENSFPPPRLSARYGFKKETIAGVRHNGRNAPKADSP*
Ga0150983_141536502	3300011120	Forest Soil	MGHEERFPPTRLSAGCGFRKGTIAGMRRNGRDAPIAATHFLACA
Ga0137361_102044642	3300012362	Vadose Zone Soil	MGHEERFPPTKLSDGYGKETIAGMRCNGRDAPIPAV
Ga0126369_104622151	3300012971	Tropical Forest Soil	MSFFNKIGHEERFSPPRLSAGCGFRKETIPGTRRNGRVAP*
Ga0182041_101705691	3300016294	Soil	HAFFHSLGHEERFPPQRLSAGCGFRKETIAGTRRNERDA
Ga0182041_111236552	3300016294	Soil	MTGMAHEERFPLTRLSAGYGFRKETIAGMRRNGRDA
Ga0182033_111137631	3300016319	Soil	MAGKGQEERFPPTRLSAGYEFRKETIAEVHHDGRDAPIPGVRRQEGNLSG
Ga0182035_115566631	3300016341	Soil	MGHEERFPPIKLSAGCGFRKATIAGMKRCAETGPP
Ga0182034_101860721	3300016371	Soil	MTEAGHEEFPPTRLSAGCGFRKETIAGVHRNGRDAPI
Ga0182034_105221033	3300016371	Soil	VGQEERFPPTRLSGGYEFRKETIAEVHHDGRDAPIPGVRRQEGNLSG
Ga0182034_115163471	3300016371	Soil	AGMGHEERFPPTRLSASCGFRKETIAGARGNNHDASKSSLS
Ga0182040_116892832	3300016387	Soil	MPVAELGHEEWFPLTRLSAYCGFRKETIAGTQSNERDA
Ga0182037_106018472	3300016404	Soil	LTAALGHKERFPPTRLSAGYGVRKETIVGVRHNGRDAP
Ga0182039_114768401	3300016422	Soil	MRHEERFPPTKLSVGCGFRKETIAGMRRNGRDAPILAVRGT
Ga0182038_101724903	3300016445	Soil	PHLVIARFARARSGQGYEERFPPTGLSAGYGFRKETIAGTRRYG
Ga0182038_120303291	3300016445	Soil	VLRTAGVGHEERFLPSRLSAGFLLRKETIAGRRRNGRDAP
Ga0210407_100734585	3300020579	Soil	VTGTGHEERFPATRLSARCGFRKETIAETRCNGRDAPTAVVR
Ga0210407_110995271	3300020579	Soil	MVWSRMTQKGHEERFPPTRLSAGCGFRKETLAGMRRNGRDAPIPDLLSL
Ga0210403_112785461	3300020580	Soil	RSLKGHEERFPPTRLNAGCGFRKETIAGMRRNGRDAP
Ga0210403_112831351	3300020580	Soil	MAGKGHEERFPPTRLSAGCGFRKETIAGMRRNGRDA
Ga0210399_102043351	3300020581	Soil	MFTGARSGKGHEERFPPTRLSAGCGFRKETIAGMRRNGRDA
Ga0210399_104337522	3300020581	Soil	MGQEERFPPTRLSAGCGFRKETIAGMRRNERDAPMIGLGG
Ga0210399_106169892	3300020581	Soil	MAGVGQEERFPPTRLSAGYEFRKETIAEVHHDGRDAPIPGVRRQ
Ga0210401_104013932	3300020583	Soil	MGHNERFPPTRLSAGYGFRKETIAGMRRNGRDAPKAAIPSEPTN
Ga0210404_103951541	3300021088	Soil	MAGMGHEERFPPTRLSAGCGFRKETIAGMRHNGRD
Ga0210406_102795291	3300021168	Soil	MGHEERFPPTRLSAGCGFRKETIAGMRHNGRDAPN
Ga0210400_104677752	3300021170	Soil	MAGVGHEEQFRPTRLSAGCGFRKETIAGMGRNARDAPTADIRSARFH
Ga0210400_108193021	3300021170	Soil	VGHEERFPPTRLSAGCGFRKETIAGMRRNERAAPIPALRA
Ga0210400_115889851	3300021170	Soil	RDGNSTGHEERFPPTRLSAGCGFRKETIAGMRRNGRDAP
Ga0210408_104171463	3300021178	Soil	MGHQERFAPPRLSAGCGFRKETIAGLRRNRREAPVADTCQVTT
Ga0210408_106978151	3300021178	Soil	MTAVGHEERFPPTRLSAGCGFRKVTIAGMRRNGRDAPI
Ga0210396_102561602	3300021180	Soil	MGHEERFPPTRLSAGCGFRKETIAGMRRNGRDAPRAVVQ
Ga0210396_104161272	3300021180	Soil	MGHEERFPPTRLSAGCGFRKETIAGMRGNGRDAPIPAVRG
Ga0210387_106404214	3300021405	Soil	GARVGIGDEERFPPPQLNIGCRFRKEMIAGMRRNGRDVQ
Ga0210386_106022343	3300021406	Soil	MAGVGHEERFPPTRLSAGCGFRKETIAGIRRNGRDAPIPAVRST
Ga0210386_116689582	3300021406	Soil	MAEMGHEEQFPPTRLSAGCGFRKETIAGMRRNERDAPIPDLPGLAP
Ga0210383_107662723	3300021407	Soil	MSQMGHEERFPPTRLSAGCGFRKETIAGIRRTGRDAP
Ga0210392_109574382	3300021475	Soil	MGHEERFPPTRLSAGCGFRKETIAGMRRNGRDAPRAVVQTL
Ga0210392_111263132	3300021475	Soil	MGHEERFPPTRLSAGCGFRKETIAGIRRNGRDAPIPAVRSTTM
Ga0210402_107664581	3300021478	Soil	MGHEERFPPTRLSAGCGFRKGTIAGMRRNGRDAPIAATHFLA
Ga0210402_110014142	3300021478	Soil	MSVFAHEERFPPTRLTAGCGVRKGMIAGMRRNGRDAPMN
Ga0210402_114324251	3300021478	Soil	MGHEERFPPTRLSARCGFRKETIAETRCNGRDAPKA
Ga0242665_103072592	3300022724	Soil	MFTRARSGKGHEERFPPTRLSAGCGFRKETIAGMRRNGRDAP
Ga0207693_101128643	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MGHEERFPPTRPSAGYRFRKETIGGMRRNGRDASIAVIGPPQM
Ga0207693_112954111	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MTGMGHEERFPPTRLSAGCGFRKETIAGMRRNGRDAP
Ga0207663_104047742	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	FEATAAMGHEERFPRPKLSAGCGFGKETIAGMRRNGRDAP
Ga0207664_107990041	3300025929	Agricultural Soil	MGHEERFPPTRPSAGYRFRKETIGGMRRNGRDAPIAVIGPPQMSA
Ga0209473_12887721	3300026330	Soil	PCSFRMFVFGREERFPPTGLSAGYGLRKETIAGMRRNGRDAPMD
Ga0257161_11209172	3300026508	Soil	CATLRLYHEEQFPSTRLSAGCGFKKETIAEMRCNGRDAP
Ga0209474_100934013	3300026550	Soil	TPCSFRMFVFGREERFPPTGLSAGYGLRKETIAGMRRNGRDAPMD
Ga0208369_10014541	3300026998	Forest Soil	HEERFPPTRLSAGCGFRKETIAGMRRNGRDAPTAAIL
Ga0208369_10015231	3300026998	Forest Soil	MTGLGHEERFPPTRLSAGCGFRKETIAGMRRNGRDA
Ga0207949_10033042	3300026999	Forest Soil	MSAVGHEERFPPTRLSAGCGFRKETIAGIRRNGRDAPEAGVH
Ga0208859_10039831	3300027069	Forest Soil	HEERFPPTRLSAGCGFRKETIAGMRRNGRDAPIPAVR
Ga0208095_10052671	3300027104	Forest Soil	VTGTGHEERFPATRLSARCGFRKETIAETRCNGRDAPIAVIRAYRP
Ga0209465_101889033	3300027874	Tropical Forest Soil	MTEEGHEERFPQTRMSARCGFRKATIAGIRRNGQDAPILDARR
Ga0209526_100138341	3300028047	Forest Soil	MTGKRQEERFPPTRLSAGYGFRKETLAGMRRNGRDA
Ga0209526_103524992	3300028047	Forest Soil	LGHEERFPPPRLSAGYAFRKETIAGMRRNGRDAPTADISRAS
Ga0209526_105907831	3300028047	Forest Soil	VGQEERFPPTRLSVGCGFRKETIAGMRRNGRDAPKAA
Ga0268264_115767262	3300028381	Switchgrass Rhizosphere	MTGKRQEERFPPTRLSAGYGFRKETIAGVRHNERDA
Ga0075399_100254061	3300030967	Soil	EERFPPTRLSAGCGFRKETIAGMRRNGRDAPIPAARLGGGEVR
Ga0170824_1025228881	3300031231	Forest Soil	LGHEERFPQTRMSAGCGFRNETIVGMRRNGRDAPIP
Ga0170824_1116981881	3300031231	Forest Soil	MGHKDAFPPTRLSAGCGFRKETIAGRNGRDESIPALS
Ga0170824_1161086001	3300031231	Forest Soil	VGHEERFPPTRLNAGCGFRKETIAGMRRNGRDAPKA
Ga0170824_1204208161	3300031231	Forest Soil	MGHEEPFPPTRLNAGCGFIKETIAGVRCNGRDAPRAVIPVNAV
Ga0170824_1260416791	3300031231	Forest Soil	MAAPGHEERFPPTRLSAGCGFRKETIAGMRRNGRDAPIAAVP
Ga0170820_127059891	3300031446	Forest Soil	MSGLGHEERFPPTRLTAACGFRKETIAGMRRNGRDAPIPAVR
Ga0170818_1062039213	3300031474	Forest Soil	MTGLGHEERFPPPRLRVGCGFRKETIAGMRRNGRDAPIPDLPG
Ga0170818_1081153801	3300031474	Forest Soil	MGHEERFPPTRLSARYGFRKETIAGMRRNGRDGPIPAVRQLTP
Ga0318516_102597562	3300031543	Soil	MTEVGHEEFPPTRLSAGCGFRKETIAGVHRNGRDAPISA
Ga0318516_105001512	3300031543	Soil	MTGLGHEERFPPTRLSAGCGFRKETIAGTRRNGRDA
Ga0318571_103630971	3300031549	Soil	MIEWFRPPRLGVGCEFRKETIAGRRRNGRGAPKAE
Ga0318528_101385961	3300031561	Soil	MAVSGHEERFPPTRLNAGYVLRKETIAGVRLDGRDAPIPGVRGV
Ga0310915_106598471	3300031573	Soil	MRHEERFPPTKLSVGCGVRKETIAGMRRNGRDAPKA
Ga0310915_106948832	3300031573	Soil	MAGVGHEERLPLTGLDAGCGFRKETIAGMRRNWRDGPIADL
Ga0318574_102795063	3300031680	Soil	MTAKGHQKRFPLTRLSAGCGFRKETIAGMRRNGRDAP
Ga0318572_105140892	3300031681	Soil	MTAKGHQKRFPLTRLSAGCGFRKETIAGMRRNGRD
Ga0310686_1171188192	3300031708	Soil	MGHEERFRPTRLSVGCGFRKETIAGMRRNGRDAPIPVIQRSKP
Ga0318500_100811633	3300031724	Soil	MTHSGHEERYPPTKLSVGCGFRKETIAGMSRKGRDAPYADLS
Ga0318500_103036612	3300031724	Soil	VMAGQGHEERFPPTRLSAGCGFRKETIAGMRRNGRDAPKAAVLTA
Ga0318500_103451662	3300031724	Soil	RESASGHQGSFLRQRLSAGCGFGKETIAEMRRDGRDAP
Ga0318501_103624282	3300031736	Soil	MAVSGHEERFPPTRLNAGYVLRKETIAGVRLDGRDAPKD
Ga0318502_107041492	3300031747	Soil	MAGKGQEERFPPTRLSAGYEFRKETIAEVHHDGRDAPIPGVRRQEGNLS
Ga0318492_103317951	3300031748	Soil	VGQEERFPPTRLSGGYEFRKETIAEVHHDGRDAPIPGVR
Ga0318494_106526081	3300031751	Soil	MRHEERFPPTKLSVGCGFRKETIAGMRRNGRDAPISDLP
Ga0307477_100895253	3300031753	Hardwood Forest Soil	MSAMGHEERFPPTRLSAGYGFRKETIGGMRRTGEMRRVEM
Ga0307477_104519631	3300031753	Hardwood Forest Soil	MTGMGQEERFPPTRLSAGCGFRKETIAGMRRNGRDAPFPDARRGE
Ga0318537_102476961	3300031763	Soil	MTEVGHEEFPPTRLSAGCGFRKETIAGVHRNGRDAPISAVR
Ga0318546_103256131	3300031771	Soil	MAVSGHEERFPPTRLNAGYVLRKETIAGVRLDGRDAPIP
Ga0318546_106475852	3300031771	Soil	EWGHKDQFPPHRLSAGFGFRKATIAGTRRNGRDAP
Ga0318547_107453221	3300031781	Soil	MAGKGQEERFPPTRLSAGYEFRKETIAEVHHDGRDAPIPGVRRQEGNLSGSG
Ga0318552_103317672	3300031782	Soil	MTAKGHQKRFPLTRLSAGCGFRKETIAGMRRNGRDAPKAAICIG
Ga0318557_100463563	3300031795	Soil	VGQEERFPPTRLSGGYEFRKETIAEVHHDGRDAPIPGVRRQEGNLS
Ga0318523_100847052	3300031798	Soil	VGQEERFPPTRLSGGYEFRKETIAEVHHDGRDAPIPGVRRQEG
Ga0318568_106008151	3300031819	Soil	MTEVGHEEFPPTRLSAGCGFRKETIAGVHRNGRDAPISAVRLTTTS
Ga0318567_103743011	3300031821	Soil	VSAKGHEERFPPTRLSAGYGFRKETIAGTRRNGRDAP
Ga0318499_100375482	3300031832	Soil	MRHEERFPPTKLSVGRGFRKETIAGMRRNGRDAPMSLKK
Ga0318536_104977551	3300031893	Soil	MTAVGHEERFPPPGLSAGCGFRKETIAGMRRNGRVAPTAAVR
Ga0306923_100567821	3300031910	Soil	MTGMAHEERFPLTRLSAGYGFRKETIAGMRRNGRDAPKTV
Ga0306923_101383511	3300031910	Soil	MGHEERFPPTRLNAGYVLRKETIAGVRLDGRDAPIPN
Ga0306923_107752161	3300031910	Soil	MGHEERFPQTRVSAGYGFRKETIIGMCRNERDAPLAAVCRDAMMLRDSTR
Ga0306921_108495851	3300031912	Soil	VGHEERFPPTRLNAGYVLRKETIAGVRLDGRDAPIP
Ga0310910_108043541	3300031946	Soil	MTAQGHEEWFPPSNLSDGFGLRKETVAGRRRNGRDAPKAVVALFRYKL
Ga0310909_107475112	3300031947	Soil	MTAKGHQKRFPLTRLSAGCGFRKETIAGMRRNGRDAPKAAICI
Ga0310909_110150231	3300031947	Soil	MTGMAHEERFPLTRLSAGYGFRKETIAGMRRNGRDAPKTVA
Ga0318569_101640091	3300032010	Soil	QKGHEDPFPPTRLSAGCGFRKETIAGTRRNGRDAP
Ga0318506_100821331	3300032052	Soil	MTAKGHQKRFPLTRLSAGCGFRKETIAGMRRNGRDAPKGDIC
Ga0318575_101636912	3300032055	Soil	MIGSGHEERFAPSRLSAGFGLRKETIAGRRRNGRDAPIPA
Ga0318533_111631221	3300032059	Soil	LEAMTAMGHEERFPPTILGAGYGFRKETIAGMHPNGRDAPIAAVR
Ga0318510_103663802	3300032064	Soil	VEREERFPPTRLNAGYVLRKETIAGVRLDGRDAPIPGVRGV
Ga0318513_100636881	3300032065	Soil	HGRAGMTDQGHEERFPPPRLNAGCRFRKETIAEIRRNGRDAPKPVIAD
Ga0318514_102388732	3300032066	Soil	MRHEERYPPTKLSVGRGFRKETIAGMRRNGRDAPGAAIRPS
Ga0306924_103991301	3300032076	Soil	MAGAGHEERFPLIRLSAGYGFGKETIARVRHNGRDAPIP
Ga0306924_105550521	3300032076	Soil	MTAKGHQKRFPLTRLSAGCGFRKETIAGMRRNGRDAPKAAICIGIVE
Ga0306924_107693693	3300032076	Soil	MGHEERFPPTRLNAGYVLRKETIAGVRLVGRDAPIPNLPP
Ga0318525_103157821	3300032089	Soil	MRHEERFPPTKLSVGRGFRKETIAGMRRNGRDAPMS
Ga0318540_103165081	3300032094	Soil	REERFPPTGLSAGYGFRKETIAGMRRNGRDAPIPAIRRLI
Ga0307471_1003084881	3300032180	Hardwood Forest Soil	LFNGIGHEDPFLQATLSARYGFRKETITGTRRNGRDAPLPA
Ga0307471_1011392751	3300032180	Hardwood Forest Soil	MAGMGHEERLPPPRLSARCGFRKETITGMRAATGDGPKAFLPGT
Ga0306920_1007806332	3300032261	Soil	LTAALGHKERFPPTRLSAGYGVRKETIVGVRHNGRDAPI
Ga0306920_1013685361	3300032261	Soil	LQRGHEERFPPTKLSAGCGFRKETIAGICRNGRDAP
Ga0306920_1026480412	3300032261	Soil	MTAKGHQKRFPLTRLSAGCGFRKETIAGMRRNGRDAPTAAIRR
Ga0306920_1042810392	3300032261	Soil	EERFPSPRLSAAYGFRKETIAGMPCNGRDAPIAAIPIELT

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F054236

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences