Metagenome / Metatranscriptome Family F054223

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F054223
Family Type	Metagenome / Metatranscriptome
Number of Sequences	140
Average Sequence Length	58 residues
Representative Sequence	VVGMDAVRRELRGSAIALVMVAVTTLVVYALTQSLEVRRGSVIYLLPVLLAGWHLGLI
Number of Associated Samples	118
Number of Associated Scaffolds	140

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	94.29 %
% of genes near scaffold ends (potentially truncated)	99.29 %
% of genes from short scaffolds (< 2000 bps)	90.71 %
Associated GOLD sequencing projects	114
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.46

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (95.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (20.000 % of family members)
Environment Ontology (ENVO)	Unclassified (23.571 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (51.429 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 61.63% β-sheet: 0.00% Coil/Unstructured: 38.37%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.46
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.46
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 140 Family Scaffolds
PF13493	DUF4118	5.00
PF11306	DUF3108	4.29
PF12697	Abhydrolase_6	3.57
PF12695	Abhydrolase_5	2.14
PF06751	EutB	1.43
PF13450	NAD_binding_8	1.43
PF07885	Ion_trans_2	1.43
PF01925	TauE	0.71
PF03972	MmgE_PrpD	0.71
PF13356	Arm-DNA-bind_3	0.71
PF00501	AMP-binding	0.71
PF00196	GerE	0.71
PF04392	ABC_sub_bind	0.71
PF02668	TauD	0.71
PF13328	HD_4	0.71
PF00512	HisKA	0.71

COG ID	Name	Functional Category	% Frequency in 140 Family Scaffolds
COG4303	Ethanolamine ammonia-lyase, large subunit	Amino acid transport and metabolism [E]	1.43
COG0730	Sulfite exporter TauE/SafE/YfcA and related permeases, UPF0721 family	Inorganic ion transport and metabolism [P]	0.71
COG2079	2-methylcitrate dehydratase PrpD	Carbohydrate transport and metabolism [G]	0.71
COG2175	Taurine dioxygenase, alpha-ketoglutarate-dependent	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.71
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.71

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	95.00 %
Unclassified	root	N/A	5.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	95.00 %
Unclassified	root	N/A	5.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	95.00 %
Unclassified	root	N/A	5.00 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	89.29 %
Unclassified	root	N/A	5.00 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.71 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	79.29 %
Unclassified	root	N/A	5.00 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.71 %

Name	Rank	Taxonomy	Distribution
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	37.86 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	7.86 %
Unclassified	root	N/A	5.00 %
Bacilli	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli	0.71 %
Caulobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales	0.71 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	37.14 %
Unclassified	root	N/A	5.00 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.71 %
Caulobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae	0.71 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.71 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.71 %
Bacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	0.71 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	37.14 %
Unclassified	root	N/A	5.00 %
Alicyclobacillaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Alicyclobacillaceae	0.71 %
Phenylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium	0.71 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.71 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.71 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.71 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	37.14 %
Unclassified	root	N/A	5.00 %
Kyrpidia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Alicyclobacillaceae → Kyrpidia	0.71 %
Phenylobacterium zucineum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → Phenylobacterium zucineum	0.71 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.71 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.71 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.71 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	37.14 %
Unclassified	root	N/A	5.00 %
Kyrpidia tusciae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Alicyclobacillaceae → Kyrpidia → Kyrpidia tusciae	0.71 %
Phenylobacterium zucineum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → Phenylobacterium zucineum	0.71 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.71 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.71 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.71 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000955\|JGI1027J12803_103251934	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1167	Open in IMG/M
3300000956\|JGI10216J12902_108510009	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → Phenylobacterium zucineum	532	Open in IMG/M
3300001867\|JGI12627J18819_10451308	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Alicyclobacillaceae → Kyrpidia → Kyrpidia tusciae	526	Open in IMG/M
3300001976\|JGI24752J21851_1020120	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	871	Open in IMG/M
3300004629\|Ga0008092_11301749	All Organisms → cellular organisms → Bacteria → Proteobacteria	669	Open in IMG/M
3300005167\|Ga0066672_10458448	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	832	Open in IMG/M
3300005172\|Ga0066683_10435596	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	806	Open in IMG/M
3300005172\|Ga0066683_10668226	All Organisms → cellular organisms → Bacteria → Proteobacteria	620	Open in IMG/M
3300005187\|Ga0066675_10026079	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3370	Open in IMG/M
3300005327\|Ga0070658_11124842	Not Available	683	Open in IMG/M
3300005332\|Ga0066388_102204487	All Organisms → cellular organisms → Bacteria → Proteobacteria	994	Open in IMG/M
3300005332\|Ga0066388_105378897	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	649	Open in IMG/M
3300005332\|Ga0066388_106856780	All Organisms → cellular organisms → Bacteria → Proteobacteria	573	Open in IMG/M
3300005332\|Ga0066388_107342105	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	553	Open in IMG/M
3300005363\|Ga0008090_10151357	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1029	Open in IMG/M
3300005434\|Ga0070709_10149161	All Organisms → cellular organisms → Bacteria	1614	Open in IMG/M
3300005439\|Ga0070711_101609248	All Organisms → cellular organisms → Bacteria → Proteobacteria	568	Open in IMG/M
3300005445\|Ga0070708_101378426	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	658	Open in IMG/M
3300005561\|Ga0066699_10470073	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	899	Open in IMG/M
3300005713\|Ga0066905_100575660	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	949	Open in IMG/M
3300005713\|Ga0066905_101135612	All Organisms → cellular organisms → Bacteria → Proteobacteria	695	Open in IMG/M
3300005713\|Ga0066905_101640321	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	589	Open in IMG/M
3300005764\|Ga0066903_105538227	All Organisms → cellular organisms → Bacteria	665	Open in IMG/M
3300005983\|Ga0081540_1317172	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	535	Open in IMG/M
3300006032\|Ga0066696_10077300	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1945	Open in IMG/M
3300006038\|Ga0075365_10074198	All Organisms → cellular organisms → Bacteria → Proteobacteria	2294	Open in IMG/M
3300006175\|Ga0070712_100769273	All Organisms → cellular organisms → Bacteria → Proteobacteria	825	Open in IMG/M
3300006175\|Ga0070712_101234236	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	650	Open in IMG/M
3300006604\|Ga0074060_10016030	All Organisms → cellular organisms → Bacteria → Proteobacteria	881	Open in IMG/M
3300006800\|Ga0066660_10769011	All Organisms → cellular organisms → Bacteria	785	Open in IMG/M
3300006845\|Ga0075421_100283412	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2021	Open in IMG/M
3300006845\|Ga0075421_100532662	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1390	Open in IMG/M
3300006845\|Ga0075421_102260628	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	572	Open in IMG/M
3300006853\|Ga0075420_100595408	All Organisms → cellular organisms → Bacteria → Proteobacteria	954	Open in IMG/M
3300009012\|Ga0066710_100230504	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2664	Open in IMG/M
3300009148\|Ga0105243_12851938	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	524	Open in IMG/M
3300009156\|Ga0111538_10284575	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2092	Open in IMG/M
3300009162\|Ga0075423_11448483	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	736	Open in IMG/M
3300009162\|Ga0075423_12217234	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	597	Open in IMG/M
3300010042\|Ga0126314_10661811	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	764	Open in IMG/M
3300010047\|Ga0126382_11250692	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	668	Open in IMG/M
3300010326\|Ga0134065_10261754	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	649	Open in IMG/M
3300010339\|Ga0074046_10497720	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	728	Open in IMG/M
3300010358\|Ga0126370_11339326	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	673	Open in IMG/M
3300010358\|Ga0126370_12124373	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	552	Open in IMG/M
3300010362\|Ga0126377_11840803	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	681	Open in IMG/M
3300010366\|Ga0126379_11693920	Not Available	737	Open in IMG/M
3300010398\|Ga0126383_10899671	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	971	Open in IMG/M
3300010398\|Ga0126383_11281747	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	823	Open in IMG/M
3300010398\|Ga0126383_12847115	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	565	Open in IMG/M
3300010398\|Ga0126383_12994634	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	552	Open in IMG/M
3300011270\|Ga0137391_10654251	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	876	Open in IMG/M
3300012021\|Ga0120192_10103966	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	578	Open in IMG/M
3300012022\|Ga0120191_10104193	All Organisms → cellular organisms → Bacteria	590	Open in IMG/M
3300012198\|Ga0137364_10813482	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	706	Open in IMG/M
3300012207\|Ga0137381_10880314	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	775	Open in IMG/M
3300012207\|Ga0137381_11061813	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	697	Open in IMG/M
3300012355\|Ga0137369_10149980	All Organisms → cellular organisms → Bacteria	1852	Open in IMG/M
3300012532\|Ga0137373_10890302	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	654	Open in IMG/M
3300012927\|Ga0137416_11178224	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	689	Open in IMG/M
3300012948\|Ga0126375_10689334	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	794	Open in IMG/M
3300012951\|Ga0164300_10042654	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1747	Open in IMG/M
3300012971\|Ga0126369_10940447	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	951	Open in IMG/M
3300012971\|Ga0126369_12492233	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	603	Open in IMG/M
3300012971\|Ga0126369_12608152	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	590	Open in IMG/M
3300012971\|Ga0126369_12937711	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	558	Open in IMG/M
3300012987\|Ga0164307_10390653	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1022	Open in IMG/M
3300012988\|Ga0164306_10284308	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1200	Open in IMG/M
3300013306\|Ga0163162_10987457	All Organisms → cellular organisms → Bacteria → Proteobacteria	952	Open in IMG/M
3300014260\|Ga0075307_1139180	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	535	Open in IMG/M
3300015200\|Ga0173480_10403275	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	794	Open in IMG/M
3300015371\|Ga0132258_10755515	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2450	Open in IMG/M
3300015374\|Ga0132255_101588073	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	991	Open in IMG/M
3300016294\|Ga0182041_10160977	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1745	Open in IMG/M
3300016387\|Ga0182040_10442349	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1028	Open in IMG/M
3300016387\|Ga0182040_11125666	All Organisms → cellular organisms → Bacteria → Proteobacteria	658	Open in IMG/M
3300016404\|Ga0182037_10374345	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1166	Open in IMG/M
3300016422\|Ga0182039_11808586	Not Available	560	Open in IMG/M
3300018000\|Ga0184604_10158247	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	752	Open in IMG/M
3300018054\|Ga0184621_10075957	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1162	Open in IMG/M
3300018082\|Ga0184639_10395782	Not Available	714	Open in IMG/M
3300018468\|Ga0066662_10777755	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	925	Open in IMG/M
3300018469\|Ga0190270_12961905	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	537	Open in IMG/M
3300020016\|Ga0193696_1179383	Not Available	507	Open in IMG/M
3300020579\|Ga0210407_10700575	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	785	Open in IMG/M
3300021361\|Ga0213872_10371734	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	583	Open in IMG/M
3300021510\|Ga0222621_1027246	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1169	Open in IMG/M
3300024288\|Ga0179589_10611911	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	511	Open in IMG/M
3300025223\|Ga0207672_1010662	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	557	Open in IMG/M
3300025936\|Ga0207670_11166127	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	651	Open in IMG/M
3300025937\|Ga0207669_11704354	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	538	Open in IMG/M
3300026331\|Ga0209267_1300176	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	534	Open in IMG/M
3300026528\|Ga0209378_1058306	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1832	Open in IMG/M
3300026552\|Ga0209577_10525632	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	771	Open in IMG/M
3300027671\|Ga0209588_1248918	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	543	Open in IMG/M
3300027855\|Ga0209693_10193743	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1001	Open in IMG/M
3300028536\|Ga0137415_10837493	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	730	Open in IMG/M
3300028712\|Ga0307285_10046656	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1072	Open in IMG/M
3300028712\|Ga0307285_10110449	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	732	Open in IMG/M
3300028715\|Ga0307313_10031410	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1500	Open in IMG/M
3300028716\|Ga0307311_10091451	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	843	Open in IMG/M
3300028717\|Ga0307298_10039257	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1278	Open in IMG/M
3300028720\|Ga0307317_10128327	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	847	Open in IMG/M
3300028720\|Ga0307317_10167897	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	738	Open in IMG/M
3300028778\|Ga0307288_10385407	Not Available	569	Open in IMG/M
3300028782\|Ga0307306_10133985	Not Available	680	Open in IMG/M
3300028784\|Ga0307282_10486795	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	599	Open in IMG/M
3300028787\|Ga0307323_10061374	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1331	Open in IMG/M
3300028787\|Ga0307323_10149417	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	843	Open in IMG/M
3300028880\|Ga0307300_10160073	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	712	Open in IMG/M
3300029636\|Ga0222749_10764924	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	528	Open in IMG/M
3300031543\|Ga0318516_10835327	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	520	Open in IMG/M
3300031682\|Ga0318560_10016386	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3310	Open in IMG/M
3300031713\|Ga0318496_10274870	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	929	Open in IMG/M
3300031744\|Ga0306918_10073714	All Organisms → cellular organisms → Bacteria → Proteobacteria	2353	Open in IMG/M
3300031747\|Ga0318502_10400317	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	816	Open in IMG/M
3300031769\|Ga0318526_10111592	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1097	Open in IMG/M
3300031771\|Ga0318546_10281448	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1149	Open in IMG/M
3300031777\|Ga0318543_10404168	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	612	Open in IMG/M
3300031793\|Ga0318548_10008808	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	3878	Open in IMG/M
3300031794\|Ga0318503_10129920	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	808	Open in IMG/M
3300031796\|Ga0318576_10060523	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1662	Open in IMG/M
3300031798\|Ga0318523_10060474	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1801	Open in IMG/M
3300031799\|Ga0318565_10433608	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	636	Open in IMG/M
3300031819\|Ga0318568_10074011	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2006	Open in IMG/M
3300031832\|Ga0318499_10263978	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	667	Open in IMG/M
3300031860\|Ga0318495_10010576	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3800	Open in IMG/M
3300031880\|Ga0318544_10015783	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2466	Open in IMG/M
3300031897\|Ga0318520_10088152	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1719	Open in IMG/M
3300031945\|Ga0310913_10752349	All Organisms → cellular organisms → Bacteria	688	Open in IMG/M
3300031954\|Ga0306926_10485332	All Organisms → cellular organisms → Bacteria → Proteobacteria	1520	Open in IMG/M
3300032035\|Ga0310911_10348127	All Organisms → cellular organisms → Bacteria	855	Open in IMG/M
3300032043\|Ga0318556_10635029	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	556	Open in IMG/M
3300032044\|Ga0318558_10010207	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3526	Open in IMG/M
3300032060\|Ga0318505_10313435	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	741	Open in IMG/M
3300032089\|Ga0318525_10273813	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	867	Open in IMG/M
3300032090\|Ga0318518_10065758	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1757	Open in IMG/M
3300032091\|Ga0318577_10328169	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	731	Open in IMG/M
3300032421\|Ga0310812_10182135	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	906	Open in IMG/M
3300033289\|Ga0310914_11463035	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	586	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	87.14%
Host-Associated	Host-Associated	12.86%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	84.29%
Plants	Host-Associated → Plants	12.86%
Aquatic	Environmental → Aquatic	2.86%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	84.29%
Rhizosphere	Host-Associated → Plants → Rhizosphere	7.86%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.29%
Sediment	Environmental → Aquatic → Sediment	2.86%
Roots	Host-Associated → Plants → Roots	0.71%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	71.43%
Loam	Environmental → Terrestrial → Soil → Loam	11.43%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.43%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.86%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.86%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.43%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.43%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.43%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	0.71%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	35.00%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	25.00%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	10.00%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.14%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.43%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.29%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.86%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.86%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	1.43%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.43%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.43%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.43%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	0.71%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	20.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	14.29%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	10.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	8.57%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	7.14%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	5.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.00%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.00%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.57%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.14%
Terrestrial	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial	1.43%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.43%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.43%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.43%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	1.43%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.71%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.71%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.71%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.71%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.71%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.71%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.71%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.71%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.71%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.71%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	0.71%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.71%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.71%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.71%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.71%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300001976	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S7	Host-Associated	Open in IMG/M
3300004629	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome P72I A01 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005983	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006038	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5	Host-Associated	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006604	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012021	Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - T1	Environmental	Open in IMG/M
3300012022	Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - C6	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014260	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Joice_ThreeSqA_D1_rd	Environmental	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300018000	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coex	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b2	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300020016	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3m1	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300021361	Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2	Host-Associated	Open in IMG/M
3300021510	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_coex	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300025223	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S2 (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026331	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes)	Environmental	Open in IMG/M
3300026528	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300027671	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028712	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_139	Environmental	Open in IMG/M
3300028715	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_203	Environmental	Open in IMG/M
3300028716	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_198	Environmental	Open in IMG/M
3300028717	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_158	Environmental	Open in IMG/M
3300028720	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_357	Environmental	Open in IMG/M
3300028778	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142	Environmental	Open in IMG/M
3300028782	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_193	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028787	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381	Environmental	Open in IMG/M
3300028880	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_181	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031794	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031832	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032421	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NN3	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI1027J12803_1032519341	3300000955	Soil	VAGMDVVRRELRGSLIALAMVAVTTVVVYGLTQSLEVRRGSVIYLLPVLLAGWHLGLIP
JGI10216J12902_1085100091	3300000956	Soil	VVRMEAVRRELRGSALALLLVAATTLVAYVLIQSFDVRRGSVIYLLPVLLAGWHLGLVPALVA
JGI12627J18819_104513081	3300001867	Forest Soil	VVAMDAVRRELRGSALALVMVAVTTVVVYALTQSLEVRRGSVIYLLPVLLAGWHLGLIPALVAAVAGVLWSG
JGI24752J21851_10201201	3300001976	Corn, Switchgrass And Miscanthus Rhizosphere	LVRMEAVRRELRGSALALVLVAATTLVAYVLIQSFDVRRGSVIYLLPVLLAGWHLG
Ga0008092_113017491	3300004629	Tropical Rainforest Soil	VVGMEAVRRELRGSAIALVMVAVTTVVVYALTQSLEVRRGSVIYLLPVLLAGWHLGLIP
Ga0066672_104584482	3300005167	Soil	VVGMDAVRRELRGSAIALVMVAVTTVVVYALTQSLEVRRGSVIYLLPVLLAGWHLG
Ga0066683_104355962	3300005172	Soil	VVGMDAVRRELRGSAIALLMVAVTTVVVYALTQSLEVRRGSVIYLLPVLLA
Ga0066683_106682261	3300005172	Soil	MIGVDTVRRELRGSAIALVLVAATTLVVYALIQYLDVRRGSVIYLLPVLLAGWHLGLIPA
Ga0066675_100260795	3300005187	Soil	VVGMDVVRRELRGSLIALAMVAVTTVVVYGLTQSLEVRRGSVIYLLPVLLAGWHLGLIPALVAAVA
Ga0070658_111248421	3300005327	Corn Rhizosphere	LVRMEAVRRELRGSALALVLVAATTLVAYVLIQSFDVRRGSVIYLLPVLLAGWHL
Ga0066388_1022044872	3300005332	Tropical Forest Soil	VVGMDAVRRELRGSAIALAMVAVTTVVVYALTQSLEVRRGSVIYLLPVLLAGWHLGLI
Ga0066388_1053788971	3300005332	Tropical Forest Soil	MMSVDAVSRELRGSAIALVMVAATTIVVYALTQYLDVRRGSVIYLLPVLLAGWHLG
Ga0066388_1068567801	3300005332	Tropical Forest Soil	VVAMEAVRRELRGSIIALAMVAATTLFAYVLIQSLDVRRGSVIYLLPVLLAGWHLG
Ga0066388_1073421051	3300005332	Tropical Forest Soil	VAGMDAVRRELRGSAIALAMVAVTTVVVYALTQSLEVRRGSVMYLLPVLLAGWHLG
Ga0008090_101513571	3300005363	Tropical Rainforest Soil	VVRMDAVRRELRGSAIALVMVAVTTVVVYALTQSLEVRRGSVMYLLPVLLA
Ga0070709_101491613	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	VAGMDVVRRELRGSVIALAMVAVTTVVVYGLTQSLEVRRGSVIYLLPVLLAGWH
Ga0070711_1016092482	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	VVAMEAVRRELRGSIIALVMVAATTLFAYVLIQSLDVRRGSVIYLLPVLLAGWHLG
Ga0070708_1013784262	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	VVGMERLRRELRGSIMALAMVAVTTVVVYALTQSLEVRRGSVLYLLPVL
Ga0066699_104700732	3300005561	Soil	VVGMERVRRELRGSVIALAMVAVTTVVVYALTQSLEVRRGSVIYLLPVLLAGWHLGLIPALV
Ga0066905_1005756601	3300005713	Tropical Forest Soil	VVRMDAVRRELRGSAIALAMVAVTTVVVYALTQSLEVRRGSVMYLLPVLLAGWHLG
Ga0066905_1011356122	3300005713	Tropical Forest Soil	MEVVRRELRGSAIALVMVAATTLVAYVLIQSLDVRRGSVIYLLPVLLAGWHLGLIPALVA
Ga0066905_1016403211	3300005713	Tropical Forest Soil	MDAVRRELRGSAIALAMVAVTTVVVYALTQSLEVRRGSVMYLLPVLLAGWHLG
Ga0066903_1055382271	3300005764	Tropical Forest Soil	VVGMDAVRRELRGSAIALAMVAVTTVVVYALTQSLEVRRGSVIYLLPVLLAGWHLGLIPALVAAVAGV
Ga0081540_13171722	3300005983	Tabebuia Heterophylla Rhizosphere	VVAMEAVRRELRGSIIALAMVAATTVFAYVLIQSLDVRRGSVIYLLPVLLAGWH
Ga0066696_100773001	3300006032	Soil	VVGMDVVRRELRGSLIALAMVAVTTVVVYGLTQSLEVRRGSVIYLLPVLLAGWHLGLIP
Ga0075365_100741981	3300006038	Populus Endosphere	MEAVRRELRGSAIALVLVAATTLVAYALIQSFDVRRGSVIYLLPVLLAGWHLGLVPALVA
Ga0070712_1007692731	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	VVRMEAVRRELRGSAIALVMVAATTLIAYVLIQSLDVRRGSVIYLLPVLLAGWHLGLVPALVA
Ga0070712_1012342361	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	VAGMDVVRRELRGSLIALAMVAVTTVVVYGLTQSLEVRRGSVIYLLPVLLAGWHLGL
Ga0074060_100160301	3300006604	Soil	MEAVRRELRGSALALVLVAATTLVAYVLIQSFDVRRGSVIYLLPVLLA
Ga0066660_107690112	3300006800	Soil	VAGMDVVRRELRGSVIALAMVAVTTVVVYGLTQSLEVRRGSVIYLLPVLLAGWHLGLIPALVAAVAGV
Ga0075421_1002834122	3300006845	Populus Rhizosphere	VVRMEAVRRELRGSAIALVMVAATTLIAYVLIQSLDVRRGSVIYLLPVLLAGWHLGLVPALVAA
Ga0075421_1005326621	3300006845	Populus Rhizosphere	MEVVRRELRGSAIALVMVAATTLVAYVLIQSLDVRRGSVIYLLPVLLAGWHLGLIPALVAAV
Ga0075421_1022606281	3300006845	Populus Rhizosphere	VVTMEAVRRELRGSAIALVMVAATTLVAYVLIQSLDVRRGSVIYLLPVLLAGWHLGLIPALVAAV
Ga0075420_1005954081	3300006853	Populus Rhizosphere	VVTMEAVRRELRGSAIALVMVAATTLVAYVLIQSLDVRRGSVIYLLPVLLAGW
Ga0066710_1002305045	3300009012	Grasslands Soil	VVGMDAVRRELRGSAIALVMVAVTTVVVYALTQSLEVRRGSVIYLLPVLLAGWHLGL
Ga0105243_128519381	3300009148	Miscanthus Rhizosphere	MEAVRRELRGSAIALVLVAATTLVAYVLIQSFDVRRGSVIYLLPVLLAGWHLGL
Ga0111538_102845751	3300009156	Populus Rhizosphere	MEAVRRELRGSAIALVMVAATTLIAYVLIQSLDVRRGSVIYLLPVLLAGW
Ga0075423_114484831	3300009162	Populus Rhizosphere	MAAQQRSVSRFDAVRRDLRGIVLALLMVAATTAVAWLLIHYLNVRRGSVIYLLPVLLAGWHLGLIPALVAAVA
Ga0075423_122172341	3300009162	Populus Rhizosphere	MEAVRRELRGSAIALVMVAATTLIAYVLIQSLDVRRGSVIYLLPVLLAGWHLGL
Ga0126314_106618112	3300010042	Serpentine Soil	MEAVRRELRGSAIALVLVAATTLVAYVLIQSFDVRRGSVIYLLPVLLAGWHLGLVPALVAAVA
Ga0126382_112506921	3300010047	Tropical Forest Soil	MGAVRRELRGSAIALVMVAVTTLVVYALTQSLEVRRGSVIYLLPVLLAGWHLGLIPALVAAVAGVL
Ga0134065_102617541	3300010326	Grasslands Soil	MERVRRELRGSVIALAMVAVTTVVVYGLTQSLEVRRGSVIYLLPVLLAGWHLGLIPALVAAVA
Ga0074046_104977201	3300010339	Bog Forest Soil	VEGVARFERLGRELRGSAIALLMVAVTTGVVYALALSLEVRRGSVVYLLPVLLAGWHLGLIPALVAAVA
Ga0126370_113393262	3300010358	Tropical Forest Soil	MGAVRRELRGSAIALVMVAVTTLVVYALTQSLEVRRGSVIYLLPVLLAGWH
Ga0126370_121243732	3300010358	Tropical Forest Soil	MDAVRRELRGSAIALVMVAVTTLVVYALTQSLEVRRGSVIYLLPVLLAGWH
Ga0126377_118408031	3300010362	Tropical Forest Soil	MGAVRRELRGSAIALAMVAVTTLVVYALTQSLEVRRGSVIYLLPVLLAGWHLGLI
Ga0126379_116939201	3300010366	Tropical Forest Soil	LIRIDAVRRELRGSAIALVMVAATTLVAYVLIHYLDVRRGSVIYLLPV
Ga0126383_108996711	3300010398	Tropical Forest Soil	MDAVRRELRGSAIALVMVAVTTVVVYALTQSLEVRRGSVMYLLPVLLAGWHLGLIP
Ga0126383_112817472	3300010398	Tropical Forest Soil	MDAVRRELRGSAISLVMVAVTTLVVYALTQSLEVRRGSVIYLLPVLLAGWHLGL
Ga0126383_128471152	3300010398	Tropical Forest Soil	MGAVRRELRGSAIALVMVAVTTLVVYALTQSLEVRRGSVIYLLPVLLAGWHLGL
Ga0126383_129946341	3300010398	Tropical Forest Soil	LRGCIIALLMVGVTTLIVYALTLSLEIRRGSAVYLIPVLLAGWHL
Ga0137391_106542512	3300011270	Vadose Zone Soil	LRGSAIALLMVAATTLVVYALTLSLEIRRGSAVYLLPVLLAGWHLGLVPALVAAVAG
Ga0120192_101039662	3300012021	Terrestrial	MEAGRRELRGSAIALVMVAATTLVAYVLIHTLDVRRGSVIYLLPVLLAGWHLGLIPALVAAGGRVARSGEL
Ga0120191_101041932	3300012022	Terrestrial	MEAVRRELRGSAIALVMVAATTLVAYVLIQTLGVRRGSVIYLLPVLLAGRHPGPPPALVAAGAGG
Ga0137364_108134821	3300012198	Vadose Zone Soil	MDRVRRELRGSVIALAMVAVTTVVVYALTQSLEVRRGSAVYLLPVLLAGWHLGLIPALVA
Ga0137381_108803142	3300012207	Vadose Zone Soil	MDAVRRELRGSAIALLMVAVTTVVVYALTQSLEVRRGSVIYLLPVLLAGWHLGLIP
Ga0137381_110618132	3300012207	Vadose Zone Soil	MDAVRRELRGSAIALVMVAVTTVVVYALTQSLEVRRGSVIYLLPVLLAGWHLGLIP
Ga0137369_101499801	3300012355	Vadose Zone Soil	MDRVRRELRGSVIALAMVAVTTVVVYALTQSLEVRRGSAVYLLPVLLAGWHLGLIPALVAAVAGVLW
Ga0137373_108903021	3300012532	Vadose Zone Soil	MDAVRRELRGSAIALLMVAVTTVVVYALTQSLEVRRGSVIYLLPVLLA
Ga0137416_111782242	3300012927	Vadose Zone Soil	MDAVRRELRGSAIALGMVAVTTVVVYALTQSLEVRRGSVIYLLPVLLAGWHLGLIPALVAAVA
Ga0126375_106893341	3300012948	Tropical Forest Soil	MEAVRRELRGSAIALVMVAATTLVAYVLIQSLDVRRGSVIYLLPVLLAGWHLGLIPALVA
Ga0164300_100426543	3300012951	Soil	MDVVRRELRGSLIALAMVAVTTVVVYGLTQSLEVRRGSVIYLLPVLLAGWHLGL
Ga0126369_109404471	3300012971	Tropical Forest Soil	MDAVRRELRGSAIALVMVAVTTLVVYALTQSLEVRRGSVIYLLPVLL
Ga0126369_124922331	3300012971	Tropical Forest Soil	MDAVRRELRGSAISLVMVAVTTLVVYALTQSLEVRRGSVIYLLPVLLAGWHLGLIPA
Ga0126369_126081521	3300012971	Tropical Forest Soil	MDAVRRELRGSAIALVMVAVTTVVVYALTQSLEVRRGSVIYLLPVLLAGWHLGLIPALVAAVAGV
Ga0126369_129377111	3300012971	Tropical Forest Soil	MDAVRRELRGSAIALVMVAVTTVVVYALTQSLEVRRGSVMYLLPVLL
Ga0164307_103906531	3300012987	Soil	VAIRFERIQRELRGSAIALLMVAATTLVVYALAASLEIRRGSAVYLLPVLLAGWHLGLI
Ga0164306_102843081	3300012988	Soil	LAMVAVTTVVVYGLTQSLEVRRGSVIYLLPVLLAGWHLGLVPALVAAVAGVLW*
Ga0163162_109874571	3300013306	Switchgrass Rhizosphere	MEAVRRELRGSAIALVLVAATTLVAYVLIQSLDVRRGSVIYLLPVLLAGWHLGLVPALVAAVAGV
Ga0075307_11391802	3300014260	Natural And Restored Wetlands	VVKIETIRRELRGVVLALLMVAITTIVTWSLIQVLDIRRGSVIYLLPVLLA
Ga0173480_104032751	3300015200	Soil	MEAVRRELRGSALALVLVAATTLVAYVLIQSFDVRRGSVIYLLPVLLAGWHLGL
Ga0132258_107555151	3300015371	Arabidopsis Rhizosphere	MEVVRRELRGSAIALVMVAATTLVAYVLIQSLDVRRGSVIYLLPVLLAGWHL
Ga0132255_1015880732	3300015374	Arabidopsis Rhizosphere	MEVVRRELRGSAIALVMVAATTLVAYVLIQSLDVRRGSVIYLLPVLLAGWHLGLV
Ga0182041_101609771	3300016294	Soil	VVGMDAVRRELRGSAIALVMVAVTTVVVYALTQSLEVRRGSVMYLLPVLLAGWHLGLIPA
Ga0182040_104423491	3300016387	Soil	VVGMDAVRRELRGSAIALAMVAVTTVVVYALTQSLEVRRGSVMYLLPVLLAGWHLGLIPALVA
Ga0182040_111256661	3300016387	Soil	VTRFDRLQRELRGSAIALVMVGAATLVVYVLALSLDIRRGSAVYLLPVLLAGWHLGLVPALVAAVAGVL
Ga0182037_103743452	3300016404	Soil	MGGTGDNVARYERVGRELRGSALALLMVAATTGLVYALTLSLEIRRGSAVYLLPVLLAGWHLGLVPALVAAV
Ga0182039_118085861	3300016422	Soil	VARYERIGRELRGSFIALLMVAVTTGIVYALALSLEIRRGSAVYLLPVLLAGW
Ga0184604_101582471	3300018000	Groundwater Sediment	VVRMEAVRRELRGSAIALVLVAATTLVAYVLIQSFDVRRGSVIYLLPVLLAGWHL
Ga0184621_100759572	3300018054	Groundwater Sediment	VVRMEAVRRELRGSAIALVPVAATTLVAYVLIQSFDVRRGSVIYLLPVLLAGWHLGLLPALVAAV
Ga0184639_103957821	3300018082	Groundwater Sediment	VVRMEAVRRELRGSAIALVLVAATTLVAYVLIQSFDVRRGSVIYLLPV
Ga0066662_107777551	3300018468	Grasslands Soil	MIGVDTVRRELRGSAIALVLVAATTLVVYALIQYLDVRRGSVIYLLPVLLAGWHLGLIPALVAAVA
Ga0190270_129619052	3300018469	Soil	MALQRAQRIRHELRGILLALLMVAVTTLVAYALIRYLDVRRGSFIYLLPVMLAGWHLGLI
Ga0193696_11793831	3300020016	Soil	VVRMEAVRRELRGSAIALVMVAATTLVAYVLIQSFDVRRGSVIYLLPVLL
Ga0210407_107005752	3300020579	Soil	VAIRFERIRRELRGSAIALLMVAATTVVVYALSASLEIRRGAVVYLLPVLLAGWHLGLIPALVAAVAGV
Ga0213872_103717341	3300021361	Rhizosphere	VVRMDAVRRELRGSAIALVMVAVTTVVVYALTQSLEVRRGSVIYLLPVLLAGWHLGL
Ga0222621_10272461	3300021510	Groundwater Sediment	MEAVRRELRGSALALVLVAATTLVAYVLIQSFDVRRGSVIYLLPVLLAGWHLGLVPALVAAVA
Ga0179589_106119111	3300024288	Vadose Zone Soil	VAGMDVVRRELRGSVIALAMVAVTTVVVYGLTQSLEVRRGSVIYLLPVLLAG
Ga0207672_10106621	3300025223	Corn, Switchgrass And Miscanthus Rhizosphere	MEAVRRELRGSALALVLVAATTLVAYVLIQSFDVRRGSVIYLLPVLLAGWHLGLVPALVAAVAG
Ga0207670_111661272	3300025936	Switchgrass Rhizosphere	VVRMEAVRRELRGSAIALVLVAATTLVAYVLIQSLDVRRGSVIYLLPVLLAGW
Ga0207669_117043541	3300025937	Miscanthus Rhizosphere	VAGMDVVRRELRGSVIALAMVAVTTVVVYGLTQSLEVRRGSVIYLLPV
Ga0209267_13001761	3300026331	Soil	VVGMERVRRELRGSVIALAMVAVTTVVVYGLTQSLEVRRGSVIYLLPVLL
Ga0209378_10583061	3300026528	Soil	VVGMDAVRRELRGSAIALVMVAVTTVVVYALTQSLEVRRGSVIYLLPVLLAGWHLGLIPALVAAVA
Ga0209577_105256321	3300026552	Soil	MIADAVSRELRGSAIALVMVAATTLVVYALTYYLDVRRGSVIYLLPVLLAGWHLGLIPA
Ga0209588_12489182	3300027671	Vadose Zone Soil	VVGMDAVRRELRGSAIALGMVAVTTVVVYALTQSLEVRRGSVIYLLPVLLAGWHLGLIPALVAAVAG
Ga0209693_101937432	3300027855	Soil	VAIRFERIRRELRGSAIALLMVAATTVVVYALSASLEIRRGAVVYLLPVLLAGWHLGLIPALVAAVAGVLLSGY
Ga0137415_108374932	3300028536	Vadose Zone Soil	MAYQQESVWRFDAVRRELPGVALALLMVAATTVVAWALINYLDVRRGSVIYLLPVLLAGWHLGLLPALYQ
Ga0307285_100466561	3300028712	Soil	MEAVRRELRGSALALVLVAATTLVAYVLIQSFDVRRGSVIYLLPVLLAGWHLGLV
Ga0307285_101104491	3300028712	Soil	VVRMEAVRRELRGSAIALVLVAATTLVAYVLIQSFDVRRGSVIYLLPVLLAGWHLGLVP
Ga0307313_100314101	3300028715	Soil	VVRMEAVRRELRGSAIALVLVAATTLVAYVLIQSFDVRRGSVIYLLPVLLA
Ga0307311_100914511	3300028716	Soil	VVRMEAVRRELRGSAIALVLVAATTLVAYVLIQSFDVRRGSVIYLLPVLLAGWHLGLLPALVAAV
Ga0307298_100392572	3300028717	Soil	VVRMEAVRRELRGSAIALVLVAATTLVAYVLIQSFDVRRGSVIYLLPVLLAGWHLGLLPALVAAVA
Ga0307317_101283272	3300028720	Soil	VVRMEAVRRELRGSAIALVLVAATTLVAYVLIQSFDVRRGSVIYLLPVLLAGWHLGLVPALVAA
Ga0307317_101678972	3300028720	Soil	VVRMESVRRELRGSAIALVLVAATTLVAYVLIQSFDVRRGSVIYLLPV
Ga0307288_103854071	3300028778	Soil	MEAVRRELRGSALALVLVAATTLVAYVLIQSFDVRRGSVIYLLPVLLAGWHL
Ga0307306_101339851	3300028782	Soil	MEAVRRELRGSALALVLVAATTLVAYVLIQSFDVRRGSVIYLLPV
Ga0307282_104867952	3300028784	Soil	LIGIDTVRREVRGSAIALAMVAATTLVAYMLIQYLEVRRGSVIYLLPVLLAGWHLGLIPALVAA
Ga0307323_100613742	3300028787	Soil	VVRMEAVRRELRGSAIALVLVAATTLVAYVLIQSFDVRRGSVIYLLPVLLAGWHLGLVPALVAAV
Ga0307323_101494172	3300028787	Soil	MEAVRRELRGSALALVLVAATTLVAYVLIQSFDVRRGSVIYLLPVLL
Ga0307300_101600731	3300028880	Soil	VVRMEAVRRELRGSAIALVLVAATTLVAYVLIQSFDVRRGSVIYLLPVLLAGWHLGLLP
Ga0222749_107649241	3300029636	Soil	VVRMDAVRRELRGSAIALVMVAVTTVVVYALTQSLEVRRGSVIYLLPVLLAGWHLGLIPALVA
Ga0318516_108353271	3300031543	Soil	VAGMDAVRRELRGSAIALVMVAVTTVVVYALTQSLEVRRGSVMYLLPVLLAGWHLGLIPALV
Ga0318560_100163864	3300031682	Soil	VVGMDAVRRELRGSAIALVMVAVTTLVVYALTQSLEVRRGSVIYLLPVLLAGWHLGLI
Ga0318496_102748702	3300031713	Soil	VVGMGAVRRELRGSAIALAMVAVTTLVVYALTQSLEVRRGSVIYLLPVLL
Ga0306918_100737145	3300031744	Soil	VVRMEAVRRELRGSAIALAMVAVTTVVVYALTQSLEVRRGSVIYLLPVLLAGWHLGL
Ga0318502_104003172	3300031747	Soil	VVGMDAVRRELRGSAIALVMVAVTTLVVYALTQSLEVRRGSVIYLLPVLLA
Ga0318526_101115921	3300031769	Soil	VVGMGAVRRELRGSAIALAMVAVTTLVVYALTQSLEVRRGSVIYLLPVLLAGWHL
Ga0318546_102814481	3300031771	Soil	VVGMDAVRRELRGSAIALVMVAVTTLVVYALTQSLEVRRGSVIYLLPVLLAGWHLGLIPALVAAVAG
Ga0318543_104041682	3300031777	Soil	MMSVDAVSRELRGSAIALVMVAATTIVVYALTQYLDVRRGSVIYLLPVLLAGWHLGLIPALVAAVA
Ga0318548_100088086	3300031793	Soil	VVGMDAVRRELRGSAIALAMVAVTTVVVYALTQSLEVRRGSVMYLLPVLLAG
Ga0318503_101299201	3300031794	Soil	VVGMDAVRRELRGSAIALAMVAVTTVVVYALTQSLEVRRGSVMYLLPVLLAGWHLGLIPALVAA
Ga0318576_100605231	3300031796	Soil	VVGMGAVRRELRGSAIALVMVAVTTLVVYALTQSLEVRRGSVIYLLPVL
Ga0318523_100604741	3300031798	Soil	VVGMDAVRRELRGSAIALAMVAVTTVVVYALTQSLEVRRGSVMYLLPVLLAGWHLGLIPALVAAVA
Ga0318565_104336082	3300031799	Soil	VVGMDAVRRELRGSAIALVMVAVTTVVVYALTQSLEVRRGSVMYLLPV
Ga0318568_100740111	3300031819	Soil	VVGMGAVRRELRGSAIALVMVAVTTLVVYALTQSLEVRRGSVIYLLPVLLAGWHLGLIPALVAAVAG
Ga0318499_102639781	3300031832	Soil	VVGMDAVRRELRGSAIALVMVAVTTLVVYALTQSLEVRRGSVIYLLPVLLAGWH
Ga0318495_100105761	3300031860	Soil	VVGMGAVRRELRGSAIALVMVAVTTLVVYALTQSLEVRRGSVIYLLPVLLAGWHLGLIPA
Ga0318544_100157834	3300031880	Soil	VVGMDAVRRELRGSAIALVMVAVTTVVVYALTQSLEVRRGSVMYLLPVLLAGWH
Ga0318520_100881521	3300031897	Soil	VVGMDAVRRELRGSAIALVMVAVTTLVVYALTQSLEVRRGSVIYLLPVLL
Ga0310913_107523492	3300031945	Soil	VTRFDRLQRELRGSAIALVMVGAATLVVYVLALSLDIRRGSAVYLLPVLLAGWHLGLV
Ga0306926_104853322	3300031954	Soil	VARLSRLQRELRGSAIALLMVAATTGIVYALTLSLEIRRGSAVYLLPVLLAGWHLGLVPALVAAVA
Ga0310911_103481271	3300032035	Soil	MGGTGDNVARYERVGRELRGSALALLMVAATTGLVYALTLSLEIRRGSAVYLLPVLLAG
Ga0318556_106350292	3300032043	Soil	VVGMDAVRRELRGSAIALVMVAVTTLVVYALTQSLEVRRGSVIYLLPVLLAGWHLERLG
Ga0318558_100102075	3300032044	Soil	VVRMDAVRRELRGSAIALVMVAVTTVVVYALTQSLEVRRGSVMYLLPVLLAGWHLGLI
Ga0318505_103134352	3300032060	Soil	VVRMDAVRRELRGSAIALVMVAVTTVVVYALTQSLEVRRGSVMYLLPVLLAGWHLG
Ga0318525_102738131	3300032089	Soil	VVGMDAVRRELRGSAIALVMVAVTTLVVYALTQSLEVRRGSVIYLLPVLLAGWHLGLIPALVAAHLERLGQRVD
Ga0318518_100657583	3300032090	Soil	VVRMDAVRRELRGSAIALVMVAVTTVVVYALTQSLEVRRGSVMYLLPVLLAGWH
Ga0318577_103281691	3300032091	Soil	VVRMDAVRRELRGSAIALVMVAVTTVVVYALTQSLEVRRGSVMYLLPVLLAG
Ga0310812_101821352	3300032421	Soil	VVRMEAVRRELRGSAIALVMVAATTLIAYVLIQSLDVRRGSVIYLLPVLLAGWHLGLVPALVAAVAG
Ga0310914_114630352	3300033289	Soil	VAGMDAVRRELRGSAIALVMVAVTTVVVYALTQSLEVRRGSVIYLLPV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F054223

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences