Metagenome Family F054203

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F054203
Family Type	Metagenome
Number of Sequences	140
Average Sequence Length	46 residues
Representative Sequence	METCFAESHAAAVKHNVITIEKAMGMIKRYLQLTTVMAAKQRANA
Number of Associated Samples	123
Number of Associated Scaffolds	140

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	78.42 %
% of genes near scaffold ends (potentially truncated)	97.86 %
% of genes from short scaffolds (< 2000 bps)	90.71 %
Associated GOLD sequencing projects	117
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.62

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (82.857 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (21.429 % of family members)
Environment Ontology (ENVO)	Unclassified (25.714 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (50.714 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 58.90% β-sheet: 0.00% Coil/Unstructured: 41.10%
Feature Viewer

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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.62
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.62
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 140 Family Scaffolds
PF13366	PDDEXK_3	2.14
PF07043	DUF1328	2.14
PF08241	Methyltransf_11	1.43
PF12900	Pyridox_ox_2	1.43
PF01554	MatE	1.43
PF01850	PIN	1.43
PF07238	PilZ	1.43
PF06071	YchF-GTPase_C	1.43
PF02548	Pantoate_transf	1.43
PF05995	CDO_I	1.43
PF01872	RibD_C	0.71
PF01590	GAF	0.71
PF00999	Na_H_Exchanger	0.71
PF01255	Prenyltransf	0.71
PF00480	ROK	0.71
PF14534	DUF4440	0.71
PF00324	AA_permease	0.71
PF08681	DUF1778	0.71
PF01695	IstB_IS21	0.71
PF00285	Citrate_synt	0.71
PF01336	tRNA_anti-codon	0.71
PF00430	ATP-synt_B	0.71
PF03169	OPT	0.71
PF01061	ABC2_membrane	0.71
PF00926	DHBP_synthase	0.71
PF00069	Pkinase	0.71
PF12704	MacB_PCD	0.71
PF02687	FtsX	0.71
PF12850	Metallophos_2	0.71
PF01192	RNA_pol_Rpb6	0.71
PF00121	TIM	0.71
PF00218	IGPS	0.71
PF14026	DUF4242	0.71
PF10397	ADSL_C	0.71
PF09970	DUF2204	0.71
PF01663	Phosphodiest	0.71
PF00171	Aldedh	0.71
PF01370	Epimerase	0.71
PF09948	DUF2182	0.71
PF02348	CTP_transf_3	0.71
PF14520	HHH_5	0.71
PF00072	Response_reg	0.71
PF00106	adh_short	0.71
PF10459	Peptidase_S46	0.71
PF04674	Phi_1	0.71
PF04357	TamB	0.71
PF05690	ThiG	0.71
PF07635	PSCyt1	0.71
PF08544	GHMP_kinases_C	0.71
PF12680	SnoaL_2	0.71
PF01401	Peptidase_M2	0.71
PF04879	Molybdop_Fe4S4	0.71
PF00440	TetR_N	0.71
PF07786	HGSNAT_cat	0.71
PF01926	MMR_HSR1	0.71
PF11138	DUF2911	0.71
PF13570	PQQ_3	0.71
PF07992	Pyr_redox_2	0.71
PF13507	GATase_5	0.71
PF11570	E2R135	0.71
PF14559	TPR_19	0.71
PF02954	HTH_8	0.71
PF08450	SGL	0.71
PF01740	STAS	0.71
PF01595	CNNM	0.71
PF06537	DHOR	0.71
PF01916	DS	0.71
PF00160	Pro_isomerase	0.71

COG ID	Name	Functional Category	% Frequency in 140 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	2.86
COG5487	Uncharacterized membrane protein YtjA, UPF0391 family	Function unknown [S]	2.14
COG5553	Predicted metal-dependent enzyme of the double-stranded beta helix superfamily	General function prediction only [R]	1.43
COG0012	Ribosome-binding ATPase YchF, GTP1/OBG family	Translation, ribosomal structure and biogenesis [J]	1.43
COG1940	Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain	Transcription [K]	1.43
COG0413	Ketopantoate hydroxymethyltransferase	Coenzyme transport and metabolism [H]	1.43
COG1758	DNA-directed RNA polymerase, subunit K/omega	Transcription [K]	0.71
COG1212	CMP-2-keto-3-deoxyoctulosonic acid synthetase	Cell wall/membrane/envelope biogenesis [M]	0.71
COG1861	Spore coat polysaccharide biosynthesis protein SpsF, cytidylyltransferase family	Cell wall/membrane/envelope biogenesis [M]	0.71
COG1899	Deoxyhypusine synthase	Translation, ribosomal structure and biogenesis [J]	0.71
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	0.71
COG2022	Thiazole synthase ThiGH, ThiG subunit (thiamin biosynthesis)	Coenzyme transport and metabolism [H]	0.71
COG2070	NAD(P)H-dependent flavin oxidoreductase YrpB, nitropropane dioxygenase family	General function prediction only [R]	0.71
COG2911	Phospholipid transport to the outer membrane protein TamB	Cell wall/membrane/envelope biogenesis [M]	0.71
COG3004	Na+/H+ antiporter NhaA	Energy production and conversion [C]	0.71
COG3263	NhaP-type Na+/H+ and K+/H+ antiporter with C-terminal TrkAC and CorC domains	Energy production and conversion [C]	0.71
COG3386	Sugar lactone lactonase YvrE	Carbohydrate transport and metabolism [G]	0.71
COG3391	DNA-binding beta-propeller fold protein YncE	General function prediction only [R]	0.71
COG3488	Uncharacterized conserved protein with two CxxC motifs, DUF1111 family	General function prediction only [R]	0.71
COG3503	Uncharacterized membrane protein, DUF1624 family	Function unknown [S]	0.71
COG4230	Delta 1-pyrroline-5-carboxylate dehydrogenase	Amino acid transport and metabolism [E]	0.71
COG4453	Uncharacterized conserved protein, DUF1778 family	Function unknown [S]	0.71
COG4651	Predicted Kef-type K+ transport protein, K+/H+ antiporter domain	Inorganic ion transport and metabolism [P]	0.71
COG0475	Kef-type K+ transport system, membrane component KefB	Inorganic ion transport and metabolism [P]	0.71
COG0014	Gamma-glutamyl phosphate reductase	Amino acid transport and metabolism [E]	0.71
COG0020	Undecaprenyl pyrophosphate synthase	Lipid transport and metabolism [I]	0.71
COG0025	NhaP-type Na+/H+ or K+/H+ antiporter	Inorganic ion transport and metabolism [P]	0.71
COG0108	3,4-dihydroxy-2-butanone 4-phosphate synthase	Coenzyme transport and metabolism [H]	0.71
COG0134	Indole-3-glycerol phosphate synthase	Amino acid transport and metabolism [E]	0.71
COG0149	Triosephosphate isomerase	Carbohydrate transport and metabolism [G]	0.71
COG0214	Pyridoxal 5'-phosphate synthase subunit PdxS	Coenzyme transport and metabolism [H]	0.71
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	0.71
COG0372	Citrate synthase	Energy production and conversion [C]	0.71
COG1484	DNA replication protein DnaC	Replication, recombination and repair [L]	0.71
COG0531	Serine transporter YbeC, amino acid:H+ symporter family	Amino acid transport and metabolism [E]	0.71
COG0652	Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family	Posttranslational modification, protein turnover, chaperones [O]	0.71
COG0711	FoF1-type ATP synthase, membrane subunit b or b'	Energy production and conversion [C]	0.71
COG0833	Amino acid permease	Amino acid transport and metabolism [E]	0.71
COG1012	Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenase	Lipid transport and metabolism [I]	0.71
COG1083	CMP-N-acetylneuraminic acid synthetase, NeuA/PseF family	Cell wall/membrane/envelope biogenesis [M]	0.71
COG1113	L-asparagine transporter or related permease	Amino acid transport and metabolism [E]	0.71
COG1115	Na+/alanine symporter	Amino acid transport and metabolism [E]	0.71
COG1297	Predicted oligopeptide transporter, OPT family	General function prediction only [R]	0.71

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	82.86 %
Unclassified	root	N/A	17.14 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	82.86 %
Unclassified	root	N/A	17.14 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	82.86 %
Unclassified	root	N/A	17.14 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	50.71 %
Unclassified	root	N/A	17.14 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.57 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	1.43 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	27.86 %
Unclassified	root	N/A	17.14 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	10.71 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.71 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.71 %
unclassified Proteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria	0.71 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.71 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	0.71 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	27.86 %
Unclassified	root	N/A	17.14 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	5.00 %
Candidatus Acidoferrales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales	2.14 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	2.14 %
Candidatus Angelobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter	0.71 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.71 %
Blastocatellales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales	0.71 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	0.71 %
unclassified Planctomycetota	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota	0.71 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.71 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	27.86 %
Unclassified	root	N/A	17.14 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4.29 %
Candidatus Acidoferrum	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum	2.14 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	2.14 %
unclassified Candidatus Angelobacter	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter	0.71 %
Pyrinomonadaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae	0.71 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.71 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.71 %
unclassified Terriglobales	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales	0.71 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.71 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.71 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	27.86 %
Unclassified	root	N/A	17.14 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	2.14 %
Candidatus Sulfopaludibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter	1.43 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1.43 %
Terriglobales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	0.71 %
Candidatus Angelobacter sp. Gp1-AA117	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	0.71 %
Candidatus Sulfotelmatobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter	0.71 %
Candidatus Solibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	0.71 %
Pyrinomonas	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas	0.71 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.71 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.71 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.71 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.71 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	27.86 %
Unclassified	root	N/A	17.14 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	2.14 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1.43 %
unclassified Candidatus Sulfotelmatobacter	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter	0.71 %
unclassified Candidatus Sulfopaludibacter	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter	0.71 %
Pyrinomonas methylaliphatogenes	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	0.71 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	0.71 %
Terriglobales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	0.71 %
Candidatus Angelobacter sp. Gp1-AA117	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	0.71 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.71 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.71 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.71 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.71 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	27.86 %
Unclassified	root	N/A	17.14 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	2.14 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1.43 %
Candidatus Sulfotelmatobacter sp. SbA7	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter sp. SbA7	0.71 %
Candidatus Sulfopaludibacter sp. SbA3	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA3	0.71 %
Candidatus Solibacter usitatus Ellin6076	isolate	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus → Candidatus Solibacter usitatus Ellin6076	0.71 %
Pyrinomonas methylaliphatogenes	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	0.71 %
Terriglobales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	0.71 %
Candidatus Angelobacter sp. Gp1-AA117	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	0.71 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.71 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.71 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.71 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.71 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000567\|JGI12270J11330_10213340	Not Available	648	Open in IMG/M
3300001356\|JGI12269J14319_10147434	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1016	Open in IMG/M
3300001545\|JGI12630J15595_10049798	All Organisms → cellular organisms → Bacteria	838	Open in IMG/M
3300001867\|JGI12627J18819_10089652	All Organisms → cellular organisms → Bacteria	1273	Open in IMG/M
3300002245\|JGIcombinedJ26739_101469621	All Organisms → cellular organisms → Bacteria	576	Open in IMG/M
3300004082\|Ga0062384_101097575	Not Available	574	Open in IMG/M
3300004152\|Ga0062386_100434075	All Organisms → cellular organisms → Bacteria → Acidobacteria	1061	Open in IMG/M
3300005171\|Ga0066677_10650885	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	593	Open in IMG/M
3300005177\|Ga0066690_10693877	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	674	Open in IMG/M
3300005343\|Ga0070687_101240444	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	551	Open in IMG/M
3300005435\|Ga0070714_100821637	All Organisms → cellular organisms → Bacteria → Acidobacteria	901	Open in IMG/M
3300005454\|Ga0066687_10507932	All Organisms → cellular organisms → Bacteria	713	Open in IMG/M
3300005458\|Ga0070681_11545593	All Organisms → cellular organisms → Bacteria	588	Open in IMG/M
3300005534\|Ga0070735_10861480	All Organisms → cellular organisms → Bacteria	532	Open in IMG/M
3300005569\|Ga0066705_10735869	All Organisms → cellular organisms → Bacteria	592	Open in IMG/M
3300005610\|Ga0070763_10346504	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	826	Open in IMG/M
3300005843\|Ga0068860_102634060	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	522	Open in IMG/M
3300006028\|Ga0070717_10095083	All Organisms → cellular organisms → Bacteria	2522	Open in IMG/M
3300006050\|Ga0075028_100872422	All Organisms → cellular organisms → Bacteria	553	Open in IMG/M
3300006176\|Ga0070765_100135612	All Organisms → cellular organisms → Bacteria → Proteobacteria	2178	Open in IMG/M
3300006176\|Ga0070765_100611166	All Organisms → cellular organisms → Bacteria	1028	Open in IMG/M
3300006804\|Ga0079221_10525107	Not Available	776	Open in IMG/M
3300006893\|Ga0073928_10955607	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	585	Open in IMG/M
3300007255\|Ga0099791_10607991	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	535	Open in IMG/M
3300007258\|Ga0099793_10049029	All Organisms → cellular organisms → Bacteria	1856	Open in IMG/M
3300009012\|Ga0066710_104652262	All Organisms → cellular organisms → Bacteria → Acidobacteria	513	Open in IMG/M
3300009038\|Ga0099829_10312833	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1289	Open in IMG/M
3300009089\|Ga0099828_11676481	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	559	Open in IMG/M
3300009143\|Ga0099792_10068220	All Organisms → cellular organisms → Bacteria	1786	Open in IMG/M
3300009521\|Ga0116222_1490146	Not Available	538	Open in IMG/M
3300009522\|Ga0116218_1418479	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	598	Open in IMG/M
3300009523\|Ga0116221_1490879	Not Available	538	Open in IMG/M
3300009524\|Ga0116225_1483548	Not Available	550	Open in IMG/M
3300009525\|Ga0116220_10330899	All Organisms → cellular organisms → Bacteria	674	Open in IMG/M
3300009525\|Ga0116220_10453493	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	578	Open in IMG/M
3300009698\|Ga0116216_10114973	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	1656	Open in IMG/M
3300009698\|Ga0116216_10955224	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA3	512	Open in IMG/M
3300009792\|Ga0126374_10876727	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	693	Open in IMG/M
3300009839\|Ga0116223_10857467	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	518	Open in IMG/M
3300010366\|Ga0126379_13127529	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	554	Open in IMG/M
3300010375\|Ga0105239_10850204	All Organisms → cellular organisms → Bacteria	1046	Open in IMG/M
3300010376\|Ga0126381_102334616	All Organisms → cellular organisms → Bacteria	768	Open in IMG/M
3300010379\|Ga0136449_101867885	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	895	Open in IMG/M
3300011269\|Ga0137392_10463046	All Organisms → cellular organisms → Bacteria → Acidobacteria	1053	Open in IMG/M
3300011270\|Ga0137391_11233382	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	595	Open in IMG/M
3300011271\|Ga0137393_10281021	All Organisms → cellular organisms → Bacteria	1416	Open in IMG/M
3300012096\|Ga0137389_10692441	All Organisms → cellular organisms → Bacteria	876	Open in IMG/M
3300012198\|Ga0137364_11432254	Not Available	511	Open in IMG/M
3300012199\|Ga0137383_11004846	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	607	Open in IMG/M
3300012200\|Ga0137382_10497337	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	866	Open in IMG/M
3300012200\|Ga0137382_11166670	All Organisms → cellular organisms → Bacteria	548	Open in IMG/M
3300012202\|Ga0137363_10450442	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1077	Open in IMG/M
3300012202\|Ga0137363_11809265	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	503	Open in IMG/M
3300012203\|Ga0137399_10018133	All Organisms → cellular organisms → Bacteria	4522	Open in IMG/M
3300012207\|Ga0137381_11618427	Not Available	538	Open in IMG/M
3300012361\|Ga0137360_10718450	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	858	Open in IMG/M
3300012361\|Ga0137360_11165635	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	666	Open in IMG/M
3300012480\|Ga0157346_1015489	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	611	Open in IMG/M
3300012495\|Ga0157323_1023783	All Organisms → cellular organisms → Bacteria	604	Open in IMG/M
3300012922\|Ga0137394_11125834	Not Available	649	Open in IMG/M
3300012922\|Ga0137394_11146620	Not Available	641	Open in IMG/M
3300012923\|Ga0137359_10300182	All Organisms → cellular organisms → Bacteria	1430	Open in IMG/M
3300012924\|Ga0137413_10137104	All Organisms → cellular organisms → Bacteria	1581	Open in IMG/M
3300012927\|Ga0137416_10749868	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	860	Open in IMG/M
3300012929\|Ga0137404_10424326	Not Available	1176	Open in IMG/M
3300012929\|Ga0137404_10863686	All Organisms → cellular organisms → Bacteria	824	Open in IMG/M
3300012929\|Ga0137404_11161038	All Organisms → cellular organisms → Bacteria	710	Open in IMG/M
3300012929\|Ga0137404_11316028	Not Available	666	Open in IMG/M
3300012929\|Ga0137404_11770090	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	574	Open in IMG/M
3300012975\|Ga0134110_10222740	All Organisms → cellular organisms → Bacteria → Acidobacteria	797	Open in IMG/M
3300013105\|Ga0157369_11651222	All Organisms → cellular organisms → Bacteria → Acidobacteria	651	Open in IMG/M
3300014154\|Ga0134075_10380603	All Organisms → cellular organisms → Bacteria → Acidobacteria	621	Open in IMG/M
3300014166\|Ga0134079_10699761	All Organisms → cellular organisms → Bacteria → Acidobacteria	517	Open in IMG/M
3300014201\|Ga0181537_11243428	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	502	Open in IMG/M
3300014492\|Ga0182013_10498310	Not Available	634	Open in IMG/M
3300014495\|Ga0182015_10207948	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1306	Open in IMG/M
3300015193\|Ga0167668_1014411	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1778	Open in IMG/M
3300015371\|Ga0132258_12853084	All Organisms → cellular organisms → Bacteria	1202	Open in IMG/M
3300015372\|Ga0132256_100149726	All Organisms → cellular organisms → Bacteria → Proteobacteria	2340	Open in IMG/M
3300016294\|Ga0182041_10237476	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	1476	Open in IMG/M
3300017942\|Ga0187808_10528781	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	548	Open in IMG/M
3300017943\|Ga0187819_10619286	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	613	Open in IMG/M
3300017974\|Ga0187777_10447509	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter sp. SbA7	898	Open in IMG/M
3300018034\|Ga0187863_10605217	All Organisms → cellular organisms → Bacteria → Acidobacteria	617	Open in IMG/M
3300018482\|Ga0066669_10370379	All Organisms → cellular organisms → Bacteria	1199	Open in IMG/M
3300020199\|Ga0179592_10301216	All Organisms → cellular organisms → Bacteria → Proteobacteria	712	Open in IMG/M
3300020579\|Ga0210407_10102858	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2172	Open in IMG/M
3300020579\|Ga0210407_10544903	Not Available	906	Open in IMG/M
3300020580\|Ga0210403_10745700	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	782	Open in IMG/M
3300021088\|Ga0210404_10048770	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1982	Open in IMG/M
3300021168\|Ga0210406_10420431	All Organisms → cellular organisms → Bacteria	1068	Open in IMG/M
3300021171\|Ga0210405_10320737	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1223	Open in IMG/M
3300021171\|Ga0210405_10365038	Not Available	1138	Open in IMG/M
3300021171\|Ga0210405_10786976	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	730	Open in IMG/M
3300021178\|Ga0210408_10468871	All Organisms → cellular organisms → Bacteria	1002	Open in IMG/M
3300021403\|Ga0210397_10074504	All Organisms → cellular organisms → Bacteria	2234	Open in IMG/M
3300021479\|Ga0210410_11052616	Not Available	703	Open in IMG/M
3300022557\|Ga0212123_10000824	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	94136	Open in IMG/M
3300022557\|Ga0212123_10000905	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	89313	Open in IMG/M
3300023250\|Ga0224544_1057285	Not Available	562	Open in IMG/M
3300024246\|Ga0247680_1064805	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	534	Open in IMG/M
3300025906\|Ga0207699_11164483	Not Available	571	Open in IMG/M
3300026041\|Ga0207639_12000705	All Organisms → cellular organisms → Bacteria	540	Open in IMG/M
3300026285\|Ga0209438_1103522	Not Available	853	Open in IMG/M
3300026469\|Ga0257169_1027033	All Organisms → cellular organisms → Bacteria	842	Open in IMG/M
3300026530\|Ga0209807_1244177	All Organisms → cellular organisms → Bacteria	608	Open in IMG/M
3300026551\|Ga0209648_10169090	Not Available	1705	Open in IMG/M
3300026552\|Ga0209577_10232424	All Organisms → cellular organisms → Bacteria → Acidobacteria	1399	Open in IMG/M
3300027497\|Ga0208199_1056659	All Organisms → cellular organisms → Bacteria	833	Open in IMG/M
3300027576\|Ga0209003_1079649	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	608	Open in IMG/M
3300027696\|Ga0208696_1157283	All Organisms → cellular organisms → Bacteria	733	Open in IMG/M
3300027869\|Ga0209579_10622103	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	585	Open in IMG/M
3300027889\|Ga0209380_10531655	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	684	Open in IMG/M
3300027911\|Ga0209698_10633827	Not Available	819	Open in IMG/M
3300028381\|Ga0268264_12092629	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	575	Open in IMG/M
3300028673\|Ga0257175_1129105	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	506	Open in IMG/M
3300028879\|Ga0302229_10282044	All Organisms → cellular organisms → Bacteria → Acidobacteria	748	Open in IMG/M
3300028906\|Ga0308309_11714226	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	533	Open in IMG/M
3300029943\|Ga0311340_11530297	All Organisms → cellular organisms → Bacteria	521	Open in IMG/M
3300030659\|Ga0316363_10108373	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter	1227	Open in IMG/M
3300030906\|Ga0302314_10011110	All Organisms → cellular organisms → Bacteria → Acidobacteria	15732	Open in IMG/M
3300031231\|Ga0170824_110268844	All Organisms → cellular organisms → Bacteria	705	Open in IMG/M
3300031231\|Ga0170824_110449745	All Organisms → cellular organisms → Bacteria → Acidobacteria	568	Open in IMG/M
3300031708\|Ga0310686_107560704	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus → Candidatus Solibacter usitatus Ellin6076	838	Open in IMG/M
3300031718\|Ga0307474_11444185	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	542	Open in IMG/M
3300031740\|Ga0307468_101176792	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	689	Open in IMG/M
3300031753\|Ga0307477_10758347	Not Available	646	Open in IMG/M
3300031753\|Ga0307477_11155134	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	504	Open in IMG/M
3300031754\|Ga0307475_11218690	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	585	Open in IMG/M
3300031823\|Ga0307478_11528461	All Organisms → cellular organisms → Bacteria → Acidobacteria	552	Open in IMG/M
3300031837\|Ga0302315_10001614	All Organisms → cellular organisms → Bacteria → Acidobacteria	22510	Open in IMG/M
3300031910\|Ga0306923_12175750	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	557	Open in IMG/M
3300031912\|Ga0306921_12004875	All Organisms → cellular organisms → Bacteria	616	Open in IMG/M
3300031962\|Ga0307479_10184905	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2050	Open in IMG/M
3300032001\|Ga0306922_11923114	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	579	Open in IMG/M
3300032160\|Ga0311301_10144299	All Organisms → cellular organisms → Bacteria → Acidobacteria	4342	Open in IMG/M
3300032205\|Ga0307472_100152233	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1692	Open in IMG/M
3300032770\|Ga0335085_11975935	Not Available	592	Open in IMG/M
3300033158\|Ga0335077_10844402	All Organisms → cellular organisms → Bacteria	928	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	93.57%
Host-Associated	Host-Associated	6.43%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	85.71%
Aquatic	Environmental → Aquatic	7.86%
Plants	Host-Associated → Plants	6.43%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	82.14%
Freshwater	Environmental → Aquatic → Freshwater	4.29%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.29%
Peat	Environmental → Terrestrial → Peat	3.57%
Thermal Springs	Environmental → Aquatic → Thermal Springs	2.14%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.14%
Sediment	Environmental → Aquatic → Sediment	1.43%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	67.86%
Loam	Environmental → Terrestrial → Soil → Loam	10.71%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	4.29%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.57%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	3.57%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.57%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	2.14%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.43%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.43%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.71%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.71%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	40.71%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	20.00%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.43%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.43%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.57%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	3.57%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.57%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.86%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	2.14%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.14%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.43%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.43%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.43%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.43%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.71%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.71%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.71%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.71%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	21.43%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	11.43%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	10.00%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	5.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.57%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.57%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.86%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.86%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.86%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	2.86%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	2.14%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.14%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.43%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.43%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.43%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.43%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.43%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.43%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.43%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.43%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	1.43%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.71%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.71%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.71%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.71%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.71%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.71%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.71%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.71%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.71%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.71%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.71%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.71%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.71%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.71%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.71%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.71%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.71%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000567	Peat soil microbial communities from Weissenstadt, Germany - SII-2010	Environmental	Open in IMG/M
3300001356	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007	Environmental	Open in IMG/M
3300001545	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300009523	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG	Environmental	Open in IMG/M
3300009524	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG	Environmental	Open in IMG/M
3300009525	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012480	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.5.yng.040610	Host-Associated	Open in IMG/M
3300012495	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.5.old.040610	Host-Associated	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300014201	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaG	Environmental	Open in IMG/M
3300014492	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2M metaG	Environmental	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300015193	Arctic soil microbial communities from a glacier forefield, Rabots glacier, Tarfala, Sweden (Sample Rb6, proglacial stream)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300023250	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P1 10-14	Environmental	Open in IMG/M
3300024246	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK21	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026285	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm (SPAdes)	Environmental	Open in IMG/M
3300026469	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-17-B	Environmental	Open in IMG/M
3300026530	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300027497	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG (SPAdes)	Environmental	Open in IMG/M
3300027576	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027696	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG (SPAdes)	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028673	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-69-B	Environmental	Open in IMG/M
3300028879	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_3	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029943	I_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300030659	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG (v2)	Environmental	Open in IMG/M
3300030906	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N2_3	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031837	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N3_1	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12270J11330_102133402	3300000567	Peatlands Soil	METCLAESHAAAVKHNVITIEKAMGMIKRYLAAKAQGER
JGI12269J14319_101474342	3300001356	Peatlands Soil	METCFAESHAAAVKHNVITIEKAMGMIKRYFQLTTVMAAKQRA
JGI12630J15595_100497982	3300001545	Forest Soil	METCFAESHAAAVKHNVITIEKATGRIKRYLQLTTVMAAKQRANAH
JGI12627J18819_100896521	3300001867	Forest Soil	VETCFAESHAAAVKHNVITIEKTMGMIKRYLQLTTVMAAKQRANAHPVPRMSV
JGIcombinedJ26739_1014696211	3300002245	Forest Soil	METCFAESHAAAVKHNVVTSEKMMGIIKKYFQLKTVMPAKQRA
Ga0062384_1010975752	3300004082	Bog Forest Soil	METCLDENNAAAVKHSVITIEKAMGMIKRYLQLTTEMAAKQRANAHAVPRMSA
Ga0062386_1004340753	3300004152	Bog Forest Soil	METRFAESQAAAVKHNVITIEKAMGRIKRYLQLTTVMAAKQRANA
Ga0066677_106508852	3300005171	Soil	MLSPHCRNEGMEGCFGDSHAAAVKHNVVTIEKAIGTIKKYFQLKTEMAAKQSANAHA
Ga0066690_106938771	3300005177	Soil	METCFAESHAAAVKHNVITIEKAMGMIKRYLQLTTVMAAKQRANAHAV
Ga0070687_1012404441	3300005343	Switchgrass Rhizosphere	VSCYCVEGVETGLAESHAAADKHIVIRMEKTMGMAKRYLQLRTVMTAKQRANAHAVPRRS
Ga0070714_1008216371	3300005435	Agricultural Soil	MLSPHWRNGGMDGRFGESHAAAVKHNVVTIEKTIGTIKKYFQLKTEMAAKQSANAHAVPRMSAKDSGG
Ga0066687_105079322	3300005454	Soil	LDTCLAESHAAANKHNVITIEKAMGMIKRYFQLTTVMAAKQRANAHAV
Ga0070681_115455932	3300005458	Corn Rhizosphere	MEDMEGCFVESHAAAIKHKVITIEKTSGVAKRYLQLTTVMAAKQ
Ga0070735_108614803	3300005534	Surface Soil	MLEACNGEQGKTYFDASHAAAAKHNVMTIEKAIGRIKRYLQLTIVMPAKQR
Ga0066705_107358691	3300005569	Soil	METCFAENHAAAVKHNVITIEKAMGMLKRYLQLTTVM
Ga0070763_103465042	3300005610	Soil	MGCAESHAAAIKHTVITIEKTIGRIKRYLQLTTVMAAKQ
Ga0068860_1026340602	3300005843	Switchgrass Rhizosphere	MEACLAESHAAAVKHNVITIEKAIGMIKRYRQLTSVMAAKQRANAHAVPR
Ga0070717_100950833	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	METCFAESHAAAVKHRVITIEKAMGRMIKRYLQLTM*
Ga0075028_1008724221	3300006050	Watersheds	MEACLAESHAPAVKHNVITIEKAMGRIKRYLQLTTVMAAKQRANAH
Ga0070765_1001356123	3300006176	Soil	MGTCFAESHAAAVKHNVITIEKAMGMIKRYLQLTTVMAAKQRANAHAVPRMRD
Ga0070765_1006111661	3300006176	Soil	MEGCFAESHAAAVKHNVMTIEKAMGRMKRYLKLTTVMAAKQRAKAHAVPR
Ga0079221_105251072	3300006804	Agricultural Soil	LAESHAATIKHTVIRKEKTIGRIKRYLQLRTVIAAKQRAN
Ga0073928_109556072	3300006893	Iron-Sulfur Acid Spring	METCFVESQAAAVKHKVITIEKAMGRIKRYRQLTTVMAAKQRANAHAVPRMS
Ga0099791_106079912	3300007255	Vadose Zone Soil	MGTCLAESHAAAVKHNVITIEKAMGMIKRYLQLTTVMAAKQRANAHA
Ga0099793_100490291	3300007258	Vadose Zone Soil	MEICFAESHAAAVKHNVITIEKAMGMTKRYLQLTTVMAAKQRANAHTVPR
Ga0066710_1046522621	3300009012	Grasslands Soil	METCFAESHAAAVKHNVITIEKAMGMIKRYLQLTT
Ga0099829_103128331	3300009038	Vadose Zone Soil	METCFAESHAAAVKHNVITIEKAMGMIKRYLQLTTVMAAKQRAN
Ga0099828_116764811	3300009089	Vadose Zone Soil	METCFAESHAAAVKHNVITIEKAMGMIKRYLQLTTVMAAKQKANAHAAP
Ga0099792_100682201	3300009143	Vadose Zone Soil	MEACLAESHAAAVKHSVIRIEKAMGIMKRYLQLTTVMAAKHRANAHAV
Ga0116222_14901462	3300009521	Peatlands Soil	METCFAESHAAAVKHNVITIEKAMGMIKRYLQLTTVMAAK
Ga0116218_14184791	3300009522	Peatlands Soil	METCFAESHAAAVKHNVVTIEKTMGIIKKYFQLKTVIATKQR
Ga0116221_14908792	3300009523	Peatlands Soil	MEACFAEIHAAAVKHNVITIEKAMGMIKRYLQLTTVMAAKQR
Ga0116225_14835482	3300009524	Peatlands Soil	MEACFAEIHAAAVKHNVITIEKTMGIIKKYFQLKTVMAAKQRANAH
Ga0116220_103308992	3300009525	Peatlands Soil	METCFAESHAAAVKHSVITIENAMGMIKRYLQLTTVMAAKQRANAH
Ga0116220_104534932	3300009525	Peatlands Soil	METCFAESHAAAAKHNVITIEKAMGMIKRYLQLTTVMAAKQRANAHAVPR
Ga0116216_101149731	3300009698	Peatlands Soil	METCFAESHAAAAKHNVITIEKAMGMIKRYLQLTTVMAAKQRANAHAVPRMGAKV
Ga0116216_109552243	3300009698	Peatlands Soil	METRFVESHAAAVKHKVVTIEKTMGIIKKYFQLKTVM
Ga0126374_108767272	3300009792	Tropical Forest Soil	MRFAESHAPAVKHTVITIEKTIGRINKYLQLTTVMAAKQRA
Ga0116223_108574673	3300009839	Peatlands Soil	METRFAESHAAAVKHNVVTIEKTMGIIKKYFQLKTVMAAKQRANAHAVPRM
Ga0126379_131275291	3300010366	Tropical Forest Soil	METYFDESHAAEIKHTVITIEKTIGRIKRYLQLTSVIAAKQKANAHAMPRMRAK
Ga0105239_108502042	3300010375	Corn Rhizosphere	METCFAESQAAAVKHNVIAIEKAMGRMKRYLQLTT
Ga0126381_1023346161	3300010376	Tropical Forest Soil	MALEVQKIYFEESHAAETKHPVITIEKTMGRRKRYRQLTTVMAAKQRANVHETPRRRARI
Ga0136449_1018678852	3300010379	Peatlands Soil	METCFAESHAAAVKHNVIKIEKAMGRTKRYLQLTTVMAAKQRANAHAM
Ga0137392_104630461	3300011269	Vadose Zone Soil	VETRFAESHAAAVKHNVITIAKAMGMIKRYLQLTTVMAAKQRAN
Ga0137391_112333822	3300011270	Vadose Zone Soil	METCLAESHAAAVKHNVITIEKAMGMIKRYLQHTNVMAAEQRANAHAVPRM
Ga0137393_102810211	3300011271	Vadose Zone Soil	METCFAESHAAVVKHNVITIEKAMGMIKRYLQLTTVMAAKQRANAHAVPRMSAKVA
Ga0137389_106924411	3300012096	Vadose Zone Soil	METCFAESHAAVVKHNVITIEKAMGMIKRYLQLTTVMAAKQRANAHAVPRMS
Ga0137364_114322542	3300012198	Vadose Zone Soil	METCFAESHAAAVKHNVIKIEKAMGRIKRYLQLTIVMAAKQSANAHT
Ga0137383_110048461	3300012199	Vadose Zone Soil	METCSAESHAAAVKHNVITIEKAMGMIKRYLQLTTVM
Ga0137382_104973372	3300012200	Vadose Zone Soil	METCFAESQAPAVKHNVIRVEKTMGVVKAYLQLKAVTAT
Ga0137382_111666702	3300012200	Vadose Zone Soil	MEICLAESHAAAVKHSVITIEKAMGMIKRYLQLTTVMAAKQRANAHAVP
Ga0137363_104504422	3300012202	Vadose Zone Soil	METCSAESHAAAVKHNVITIEKAMGMIKRYLQLTTVMAAKQR
Ga0137363_118092652	3300012202	Vadose Zone Soil	MEICFAESHAAVVKHNVITIEKAMGMTKRYLQLTTVMTAKQRANAHTVPRMSAKV
Ga0137399_100181335	3300012203	Vadose Zone Soil	METCFAESHAAAVKHNVIRIEKVIGMTKRYLQLTTAMAAKQRANAHAVPRMSAKVAV
Ga0137381_116184272	3300012207	Vadose Zone Soil	VETFLAESHAAAVKHNVVTIEKTMGIIKKYFQLKTV
Ga0137360_107184502	3300012361	Vadose Zone Soil	METCSAESHAAAVKHNVITIEKAMGMIKRYLQLTTVMAAKQRANAHAVPRMSA
Ga0137360_111656352	3300012361	Vadose Zone Soil	MEICFAESHAAAVKHNVITIEKAMGMTKRYLQLTTVMAAN
Ga0157346_10154893	3300012480	Arabidopsis Rhizosphere	METGLAESHAAAVKHNVITLEKTMGMIKRYLQLTTVMAAKQTANAHAVPRMSA
Ga0157323_10237832	3300012495	Arabidopsis Rhizosphere	METCLAESHAAAVKHKVINIEKAMGMIKRYLQLTTVMAAKQ
Ga0137394_111258342	3300012922	Vadose Zone Soil	METYLAESHAAAVKHNVITIEKAMGKTKRYLQLTTVMAPK
Ga0137394_111466201	3300012922	Vadose Zone Soil	METYLAESHAAAVKHNVITIEKAMGKTKRYLQLTTVMA
Ga0137359_103001821	3300012923	Vadose Zone Soil	METCFAESHAAAVKHNVITIEKAMGMIKRYLQLTTVMAAKQRANAHAVPRMSAKVA
Ga0137413_101371043	3300012924	Vadose Zone Soil	MGICFAESHAAAVKHNVITIEKAMGMTKRYLQLTTVMTAKQRANAHTVP
Ga0137416_107498682	3300012927	Vadose Zone Soil	METCFAESHAPAVKHNVIRVEKTMGVVKAYLQLKAVTAT
Ga0137404_104243262	3300012929	Vadose Zone Soil	METCFAESHAAAVKHNVITIEKAMGMIKRYLQLTTVMAAKQRANA
Ga0137404_108636862	3300012929	Vadose Zone Soil	MEACLAESHAAAVKHNVIRIEKAMGMMNRYLQLTIVMAAKQRANVHAVPRM
Ga0137404_111610381	3300012929	Vadose Zone Soil	METCFAESQAPAVKHNVIRVEKTMGVVKAYLQLKA
Ga0137404_113160283	3300012929	Vadose Zone Soil	VETCFAESHAAAIKNTVIRAEKTIGITKRYLQLTTVMAAKQKAKAHPVPRMSAKVA
Ga0137404_117700901	3300012929	Vadose Zone Soil	MEICFAESHAAAVKHNVITIDKAMGMTKRYLQLTTVMTAKQRANAHTVPRMSAKV
Ga0134110_102227402	3300012975	Grasslands Soil	METCLAESHAAAVKHNVITIEKAMGMIKRYLQLTTVMAAKQRANAHVAPRMSAK
Ga0157369_116512222	3300013105	Corn Rhizosphere	MEACLAESHAAAVKHNVITIEKAIGMIKRYRQLTSVMAAKQRANAHAVPRMSAKVA
Ga0134075_103806032	3300014154	Grasslands Soil	METCLAESHAAAVKHNVITIEKAMGMIKRYLQLTTVMAAKQRANAHVAPRMSA
Ga0134079_106997611	3300014166	Grasslands Soil	VEACLAESHAAAVKHNVITIEKTIGMIKRYLKLTTVMMAKQRANAH
Ga0181537_112434282	3300014201	Bog	METCLAESHAATVKHNVIRIEKAMGRIKRYFQLTTVMAAKQ
Ga0182013_104983102	3300014492	Bog	METCLAESHAATVKHNVIRIEKAMGRIKRYFQLTTVMAAKQMA
Ga0182015_102079483	3300014495	Palsa	METCFAESHAAAVKHNVITIEKAMGRMKRYLQLTTVMAAKQRA
Ga0167668_10144112	3300015193	Glacier Forefield Soil	METCLAESHAAAVKHNVITIEKAMGMIKRYLQLTTVMAAKQRANAHAVPRMSAK
Ga0132258_128530841	3300015371	Arabidopsis Rhizosphere	METCFAESQAAAVKHNVIAIEKAMGRMKRYLQLTTVMAAKQRANAHAVLRISAR
Ga0132256_1001497261	3300015372	Arabidopsis Rhizosphere	METCLAESHAAAVKHKVINIEKAMGMIKRYLQLTTVMAAKQSANAHEVPRMSAKV
Ga0182041_102374763	3300016294	Soil	MKTYFDESHAAETKHAVITIEKTIGRIKRYLQLTTVIAAKQRANAHAMLR
Ga0187808_105287812	3300017942	Freshwater Sediment	MEPCFAESHAAAVKHDVITIEKAMGRIKRYLQLTTVMAAKQRANAH
Ga0187819_106192862	3300017943	Freshwater Sediment	METCFAESHAAAVKHNVITIEKAMGMIKRYLQLTTVMAAKQRANAHAVL
Ga0187777_104475092	3300017974	Tropical Peatland	METYLDESHAAEIKHTVITAEKAIGRIKRYFQLTTVMAAKQRANAHLMPCM
Ga0187863_106052172	3300018034	Peatland	VRAAPAPAGFPESHAAAVKHTVITIEKTIGRTKRYLQLTAVMAAKQRAKAHTVERMIA
Ga0066669_103703791	3300018482	Grasslands Soil	METCLAESHAAAVKHNVITIEKAMGMIKRYLQLTTVMAAKQRANAH
Ga0179592_103012162	3300020199	Vadose Zone Soil	METCFAESHAAAVKHDVITIEKAMGTIKRYLQLTTVMAAKQR
Ga0210407_101028581	3300020579	Soil	MATCLAESHAAAVKHSVITIEKAMGRIKRYLQLTTVMAAKQRTNAHAVPR
Ga0210407_105449031	3300020579	Soil	METCLAESHAAAVKHNVITIEKAMGMTKRYLQLTTVIAAKQRANAHAVPRMSA
Ga0210403_107457001	3300020580	Soil	VTCFAESHAATVKQIVITIEKAMGKMKRYLQLTSVMAAKQKAKAHRVPRMSAK
Ga0210404_100487703	3300021088	Soil	VSFAESHAAAVKHAVITIEKTIGRIKRYLQLTTVMAPKQSARAHT
Ga0210406_104204311	3300021168	Soil	METCYAESHAAAVKHNVITIEKAMGRMKRYLQLTTVMAAKQRAKAH
Ga0210405_103207372	3300021171	Soil	METCFAESHAAAVKHNVITTEKAMGMIKRYLQLTTVMAAKQRA
Ga0210405_103650383	3300021171	Soil	LAESHAAAIKHTVIRKEKTIGRIKRYLQLRTVMAAK
Ga0210405_107869761	3300021171	Soil	MGCAESHAAAIKHTVITIEKTIGRIKRYLQLTTVMAAKQTAK
Ga0210408_104688711	3300021178	Soil	METCFAESHAAAVKHSVITIEKAMGRIKRYLQLTTVMA
Ga0210397_100745044	3300021403	Soil	MAPCLPESHAATAKHIVITIEKTIGRMKRYLQLITVMAAKQ
Ga0210410_110526161	3300021479	Soil	METYFADSHAAAVKHTVITMEKAMGMIKKYLQLKTVMAAKQRGSAHATPRI
Ga0126371_115701521	3300021560	Tropical Forest Soil	MVSAHDRTGAVAACFAGSHAATIKHSVITVEKTMGRMKRYLQLTTEIAAK
Ga0212123_1000082440	3300022557	Iron-Sulfur Acid Spring	VETCFAESHAAAVGHTVIRVEKAMGVVKGYVQLKAVTATKANGERGGDL
Ga0212123_100009051	3300022557	Iron-Sulfur Acid Spring	METCLAESHAAAVKHNVITIEKAMGMIKRYLQLTTVMA
Ga0224544_10572852	3300023250	Soil	METCLVESHAAAVKHNVITNEKAMGMIKRYLQLTTVMAAKQRANAHAVSPIS
Ga0247680_10648051	3300024246	Soil	VESHAAAVKQNVITIEKTMGRMKRYLQLTTVMAAKQRANAHAVPRMSAKV
Ga0207699_111644832	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	VESHAAVVRQRVIAMEKTIGRMKRYLQLTTAMAAKQSANAHAVPRIRAKVGAGRP
Ga0207639_120007051	3300026041	Corn Rhizosphere	METCFAESRAAAVKHNVIAIEKAMGRMKRYLQLTTVMAAKQRRTPTQ
Ga0209438_11035221	3300026285	Grasslands Soil	MEICFAESHAAAVKHNVITIEKAMGMTKRYLQLTTV
Ga0257169_10270332	3300026469	Soil	METRLAESHAAAVKHNVITIEKAMGTIKRYLQLTTVMAAKQR
Ga0209807_12441771	3300026530	Soil	METCFAENHAAAVKHNVITIEKAMGMLKRYLQLTTVMPAKQR
Ga0209648_101690903	3300026551	Grasslands Soil	METLETFFAESHAAAVKHNVITIEKAMGMIKRYLQLTTVMAAKQRANAHA
Ga0209577_102324241	3300026552	Soil	METCFAESHAAAVKHNVITIEKAMGKIKRYLQVTTV
Ga0208199_10566592	3300027497	Peatlands Soil	METCFAESHAAAAKHNVITIEKAMGMIKRYLQLTTVMAAK
Ga0209003_10796492	3300027576	Forest Soil	LAESHAAAIKQTVITKEKTIGRIKRYLQLRTVIAAKQRANAQA
Ga0208696_11572831	3300027696	Peatlands Soil	METCFAESHAAAVKHNVVTIEKTMGIIKKYFQLKTVIATKQRANAH
Ga0209579_106221031	3300027869	Surface Soil	LAESHAAAVKQNVIAIEKTIGRIKRYLQLTTVIAAKQRANAHT
Ga0209380_105316552	3300027889	Soil	MKARFVESHAAAVKHSVITIEKAMGRMKRYLQLTTVMTAKQRANAQAVPR
Ga0209698_106338271	3300027911	Watersheds	METCFAESHAAAVKHKVITIVKAMSRIKRYLQLTTVMAAKERANAHAVPRMS
Ga0268264_120926291	3300028381	Switchgrass Rhizosphere	MEACLAESHAAAVKHNVITIEKAIGMIKRYRQLTSVMAAKQRANAHAVPRMSAK
Ga0257175_11291051	3300028673	Soil	METCFAESHAAAVKHNVITIEKAMGMIKRYLQLTTVMAAKQR
Ga0302229_102820442	3300028879	Palsa	METCFAESHAAAVKHNVITIEKAMGRIKRYLQLTKVIPAKQRANPHAV
Ga0308309_117142261	3300028906	Soil	LAESQAAAVKHTVIAMEKTIGRIKRYLQLATETAAKQ
Ga0311340_115302971	3300029943	Palsa	VKLESSHLTIAESHAAAVKHNVITIEKATGMRKRYLQLTTVMAAKQRANAH
Ga0316363_101083731	3300030659	Peatlands Soil	METCLAESHAAAVKHNVITIEKAMGMIKRYLQLTTVMAAK
Ga0302314_1001111019	3300030906	Palsa	METCFAESHAAAVKHNVITIEKAMGRIKRYLQLTKVIPAKQ
Ga0170824_1102688443	3300031231	Forest Soil	MRAAIKHTVITIEKTIGSMKRYLQLTNVMAAKQTANAHA
Ga0170824_1104497452	3300031231	Forest Soil	MCDLTCFAESHAAAVKHSVVTIEKTIGTIKKYFQLKTVMAAKQSANAHAVPRMS
Ga0310686_1075607042	3300031708	Soil	LESFGGFAESHAAAVKHIVITIEKTMGRIKRYLQLTTVMAAKQ
Ga0307474_114441851	3300031718	Hardwood Forest Soil	VETCFAESHAAAVKHNVITIEKAMGRIKRYLQLTTVMAAKQRANAH
Ga0307468_1011767923	3300031740	Hardwood Forest Soil	LETGLAESHAAAIKHNVITIEKAMGTIKRYLQLTTEM
Ga0307477_107583471	3300031753	Hardwood Forest Soil	LPESHAAAVRTNVVTIEKTIGIIKKYFQLKKVIAA
Ga0307477_111551341	3300031753	Hardwood Forest Soil	MLQISCAESHAAAIKHTVITIEKTTGRIKRYLQLTTVIAAKQTAKAHAVPR
Ga0307475_112186901	3300031754	Hardwood Forest Soil	METCFAESHAAAVKHNVIRVEKTMGVVKAYLQLKA
Ga0307478_115284611	3300031823	Hardwood Forest Soil	METRFAESHAAAVKHNVVTLEKTTGIIKKYFQLKS
Ga0302315_1000161424	3300031837	Palsa	METCFAESHAAAVKHNVITIEKAMGRIKRYLQLTKVIPAKQRANPH
Ga0306923_121757502	3300031910	Soil	METCFAESHAAAVKQNVIRIEQAMGRIKRYLQLTTVMAAKQRANAQAIPRRTAKV
Ga0306921_120048751	3300031912	Soil	METCLVESHAAAAKHNVVTAAKTVGMMKRYLQLTIVMA
Ga0307479_101849054	3300031962	Hardwood Forest Soil	METCLAESHAAAVKHNVITIEKTMGITKKYFQLKTVMATKQRANAHAVPRMR
Ga0306922_119231142	3300032001	Soil	METCFAESHAAAVKQNVIRIEQAMGRIKRYLQLTTVMAAKQR
Ga0311301_101442995	3300032160	Peatlands Soil	METCFAESHAAAVKHNVVTIEKTMGIIKKYFQLKTVMAAKQRAN
Ga0307472_1001522331	3300032205	Hardwood Forest Soil	MCDLTCFAESHAAAVKHSVVTIEKTIGTIKKYFQLKTVMAAKQRAN
Ga0335085_119759351	3300032770	Soil	LPVYRGFAESHAAPAKHTVITNEKAIGRIKRNLQLTTVMAAKQRAK
Ga0335077_108444022	3300033158	Soil	VPEAGFADTHAAANRHTVITMEKAIGRIKRYLQLTTVIAAK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F054203

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences