Metagenome / Metatranscriptome Family F054197

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F054197
Family Type	Metagenome / Metatranscriptome
Number of Sequences	140
Average Sequence Length	89 residues
Representative Sequence	MTGFMALVLGAALLAGCTGPTYSYSKAGSDVADFRRDSSACVQEPRMSWGASGNPMIVGASTDAKQEATLYRMCMEARGWTAEAPR
Number of Associated Samples	107
Number of Associated Scaffolds	140

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	68.57 %
% of genes near scaffold ends (potentially truncated)	25.00 %
% of genes from short scaffolds (< 2000 bps)	79.29 %
Associated GOLD sequencing projects	93
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.52

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (62.143 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (30.000 % of family members)
Environment Ontology (ENVO)	Unclassified (36.429 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (48.571 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 38.60% β-sheet: 5.26% Coil/Unstructured: 56.14%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.52
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.52
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 140 Family Scaffolds
PF01165	Ribosomal_S21	3.57
PF00072	Response_reg	1.43
PF00012	HSP70	1.43
PF01258	zf-dskA_traR	1.43
PF03631	Virul_fac_BrkB	1.43
PF12836	HHH_3	1.43
PF07813	LTXXQ	1.43
PF02416	TatA_B_E	1.43
PF09411	PagL	0.71
PF08334	T2SSG	0.71
PF01527	HTH_Tnp_1	0.71
PF03928	HbpS-like	0.71
PF13442	Cytochrome_CBB3	0.71
PF14213	DUF4325	0.71
PF05448	AXE1	0.71
PF02518	HATPase_c	0.71
PF13683	rve_3	0.71
PF13641	Glyco_tranf_2_3	0.71
PF01381	HTH_3	0.71
PF08450	SGL	0.71
PF11295	DUF3096	0.71
PF13545	HTH_Crp_2	0.71
PF13103	TonB_2	0.71
PF13561	adh_short_C2	0.71

COG ID	Name	Functional Category	% Frequency in 140 Family Scaffolds
COG3678	Periplasmic chaperone Spy, Spy/CpxP family	Posttranslational modification, protein turnover, chaperones [O]	5.71
COG0828	Ribosomal protein S21	Translation, ribosomal structure and biogenesis [J]	3.57
COG0443	Molecular chaperone DnaK (HSP70)	Posttranslational modification, protein turnover, chaperones [O]	1.43
COG1295	Uncharacterized membrane protein, BrkB/YihY/UPF0761 family (not an RNase)	Function unknown [S]	1.43
COG1734	RNA polymerase-binding transcription factor DksA	Transcription [K]	1.43
COG1826	Twin-arginine protein secretion pathway components TatA and TatB	Intracellular trafficking, secretion, and vesicular transport [U]	1.43
COG1506	Dipeptidyl aminopeptidase/acylaminoacyl peptidase	Amino acid transport and metabolism [E]	0.71
COG3386	Sugar lactone lactonase YvrE	Carbohydrate transport and metabolism [G]	0.71
COG3391	DNA-binding beta-propeller fold protein YncE	General function prediction only [R]	0.71
COG3458	Cephalosporin-C deacetylase or related acetyl esterase	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.71

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.14 %
All Organisms	root	All Organisms	37.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.14 %
cellular organisms	root	All Organisms → cellular organisms	35.71 %
Viruses	superkingdom	All Organisms → Viruses	2.14 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.14 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	35.71 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.14 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.14 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	11.43 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	7.14 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	2.14 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.14 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.43 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.14 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	11.43 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2.14 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.14 %
Nitrospira	class	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira	1.43 %
unclassified Nitrospirae	no rank	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae	0.71 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.71 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.71 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.14 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	9.29 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.14 %
Nitrospirales	order	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales	1.43 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.71 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	0.71 %
Nitrospirae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	0.71 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.71 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.14 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	4.29 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.14 %
Nitrospiraceae	family	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae	1.43 %
Betaproteobacteria bacterium SG8_40	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium SG8_40	0.71 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.71 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.71 %
Nitrospirae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	0.71 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.14 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	4.29 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.14 %
Nitrospira	genus	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	1.43 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.71 %
Betaproteobacteria bacterium SG8_40	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium SG8_40	0.71 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.71 %
Nitrospirae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	0.71 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.14 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	4.29 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.14 %
unclassified Nitrospira	no rank	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira	1.43 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.71 %
Betaproteobacteria bacterium SG8_40	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium SG8_40	0.71 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.71 %
Nitrospirae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	0.71 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.14 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	4.29 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.14 %
Nitrospira sp. SCGC AG-212-E16	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp. SCGC AG-212-E16	1.43 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.71 %
Betaproteobacteria bacterium SG8_40	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium SG8_40	0.71 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.71 %
Nitrospirae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	0.71 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.71 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2140918013\|NODE_7250_length_1072_cov_5.287313	Not Available	1104	Open in IMG/M
3300000033\|ICChiseqgaiiDRAFT_c0545017	Not Available	765	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101349780	Not Available	578	Open in IMG/M
3300000550\|F24TB_10973075	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1107	Open in IMG/M
3300000559\|F14TC_100185972	Not Available	1231	Open in IMG/M
3300000559\|F14TC_100319787	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1820	Open in IMG/M
3300000789\|JGI1027J11758_12482809	Not Available	513	Open in IMG/M
3300000955\|JGI1027J12803_103593501	All Organisms → cellular organisms → Bacteria → Proteobacteria	758	Open in IMG/M
3300000956\|JGI10216J12902_101486730	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium SG8_40	1803	Open in IMG/M
3300000956\|JGI10216J12902_101878757	All Organisms → cellular organisms → Bacteria → Proteobacteria	1826	Open in IMG/M
3300000956\|JGI10216J12902_107435232	Not Available	1860	Open in IMG/M
3300002245\|JGIcombinedJ26739_100703740	Not Available	889	Open in IMG/M
3300002886\|JGI25612J43240_1071572	Not Available	540	Open in IMG/M
3300002886\|JGI25612J43240_1073254	Not Available	535	Open in IMG/M
3300002914\|JGI25617J43924_10136971	Not Available	851	Open in IMG/M
3300004099\|Ga0058900_1062421	Not Available	501	Open in IMG/M
3300004099\|Ga0058900_1083939	Not Available	905	Open in IMG/M
3300004135\|Ga0058884_1362231	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1470	Open in IMG/M
3300004137\|Ga0058883_1080596	Not Available	551	Open in IMG/M
3300004139\|Ga0058897_10047835	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1452	Open in IMG/M
3300005440\|Ga0070705_101293643	Not Available	604	Open in IMG/M
3300005445\|Ga0070708_100008034	All Organisms → cellular organisms → Bacteria → Proteobacteria	8454	Open in IMG/M
3300005445\|Ga0070708_100036147	All Organisms → cellular organisms → Bacteria	4307	Open in IMG/M
3300005445\|Ga0070708_100166932	Not Available	2053	Open in IMG/M
3300005445\|Ga0070708_100292866	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1532	Open in IMG/M
3300005467\|Ga0070706_100029773	Not Available	5030	Open in IMG/M
3300005467\|Ga0070706_100111728	Not Available	2543	Open in IMG/M
3300005467\|Ga0070706_100448011	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1201	Open in IMG/M
3300005467\|Ga0070706_100910310	Not Available	812	Open in IMG/M
3300005468\|Ga0070707_100078690	All Organisms → cellular organisms → Bacteria	3181	Open in IMG/M
3300005468\|Ga0070707_100201994	Not Available	1937	Open in IMG/M
3300005468\|Ga0070707_100843309	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	880	Open in IMG/M
3300005471\|Ga0070698_101371856	Not Available	657	Open in IMG/M
3300005471\|Ga0070698_101567112	Not Available	610	Open in IMG/M
3300005536\|Ga0070697_100703566	Not Available	892	Open in IMG/M
3300005921\|Ga0070766_10753690	Not Available	661	Open in IMG/M
3300006176\|Ga0070765_100425678	Not Available	1242	Open in IMG/M
3300006176\|Ga0070765_100741209	Not Available	928	Open in IMG/M
3300006844\|Ga0075428_100488981	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1317	Open in IMG/M
3300006845\|Ga0075421_100106478	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	3525	Open in IMG/M
3300006847\|Ga0075431_101614226	Not Available	606	Open in IMG/M
3300007255\|Ga0099791_10009069	All Organisms → cellular organisms → Bacteria	4126	Open in IMG/M
3300007258\|Ga0099793_10042887	All Organisms → Viruses → Predicted Viral	1970	Open in IMG/M
3300007265\|Ga0099794_10003940	All Organisms → cellular organisms → Bacteria	5757	Open in IMG/M
3300007265\|Ga0099794_10008927	All Organisms → cellular organisms → Bacteria → Proteobacteria	4181	Open in IMG/M
3300007788\|Ga0099795_10138800	Not Available	987	Open in IMG/M
3300009038\|Ga0099829_10438285	Not Available	1082	Open in IMG/M
3300009088\|Ga0099830_10356863	Not Available	1176	Open in IMG/M
3300009088\|Ga0099830_11373779	Not Available	587	Open in IMG/M
3300009088\|Ga0099830_11504253	Not Available	560	Open in IMG/M
3300009089\|Ga0099828_11524956	Not Available	589	Open in IMG/M
3300009090\|Ga0099827_10082678	All Organisms → cellular organisms → Bacteria	2512	Open in IMG/M
3300009143\|Ga0099792_10851637	Not Available	600	Open in IMG/M
3300009147\|Ga0114129_10060463	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	5297	Open in IMG/M
3300010043\|Ga0126380_11992286	Not Available	531	Open in IMG/M
3300011120\|Ga0150983_13410875	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	1020	Open in IMG/M
3300011269\|Ga0137392_10179346	All Organisms → cellular organisms → Bacteria	1724	Open in IMG/M
3300011269\|Ga0137392_10285312	Not Available	1363	Open in IMG/M
3300011269\|Ga0137392_11236205	Not Available	606	Open in IMG/M
3300011270\|Ga0137391_10200113	All Organisms → cellular organisms → Bacteria	1737	Open in IMG/M
3300011270\|Ga0137391_10317754	Not Available	1342	Open in IMG/M
3300011270\|Ga0137391_10335851	Not Available	1299	Open in IMG/M
3300011270\|Ga0137391_11249237	Not Available	590	Open in IMG/M
3300011271\|Ga0137393_10708404	Not Available	862	Open in IMG/M
3300012096\|Ga0137389_10704471	Not Available	868	Open in IMG/M
3300012199\|Ga0137383_10176190	Not Available	1567	Open in IMG/M
3300012205\|Ga0137362_10694173	Not Available	875	Open in IMG/M
3300012208\|Ga0137376_11621056	Not Available	538	Open in IMG/M
3300012351\|Ga0137386_10431632	Not Available	949	Open in IMG/M
3300012361\|Ga0137360_10087053	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2359	Open in IMG/M
3300012362\|Ga0137361_10445118	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1190	Open in IMG/M
3300012685\|Ga0137397_10019713	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	4729	Open in IMG/M
3300012917\|Ga0137395_10149765	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1597	Open in IMG/M
3300012923\|Ga0137359_11234351	Not Available	635	Open in IMG/M
3300012925\|Ga0137419_10094501	Not Available	2054	Open in IMG/M
3300012927\|Ga0137416_10159058	Not Available	1777	Open in IMG/M
3300012930\|Ga0137407_12221573	Not Available	524	Open in IMG/M
3300015052\|Ga0137411_1202281	All Organisms → cellular organisms → Bacteria	1623	Open in IMG/M
3300018422\|Ga0190265_11499351	Not Available	788	Open in IMG/M
3300020199\|Ga0179592_10426292	Not Available	576	Open in IMG/M
3300020579\|Ga0210407_10060323	Not Available	2840	Open in IMG/M
3300020580\|Ga0210403_10371860	Not Available	1169	Open in IMG/M
3300020580\|Ga0210403_10677422	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	828	Open in IMG/M
3300020581\|Ga0210399_10014104	All Organisms → cellular organisms → Bacteria	6290	Open in IMG/M
3300020581\|Ga0210399_10170560	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	1804	Open in IMG/M
3300021086\|Ga0179596_10104757	Not Available	1291	Open in IMG/M
3300021088\|Ga0210404_10395557	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	772	Open in IMG/M
3300021170\|Ga0210400_10748746	Not Available	802	Open in IMG/M
3300021178\|Ga0210408_10240156	Not Available	1442	Open in IMG/M
3300021420\|Ga0210394_11356547	Not Available	606	Open in IMG/M
3300021432\|Ga0210384_10067538	All Organisms → cellular organisms → Bacteria	3223	Open in IMG/M
3300025885\|Ga0207653_10448624	Not Available	506	Open in IMG/M
3300025910\|Ga0207684_10018636	All Organisms → cellular organisms → Bacteria	5943	Open in IMG/M
3300025910\|Ga0207684_10069594	Not Available	2991	Open in IMG/M
3300025910\|Ga0207684_10118331	Not Available	2270	Open in IMG/M
3300025922\|Ga0207646_10166192	Not Available	1992	Open in IMG/M
3300025922\|Ga0207646_11165171	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	677	Open in IMG/M
3300026285\|Ga0209438_1004983	All Organisms → cellular organisms → Bacteria → Proteobacteria	4512	Open in IMG/M
3300026340\|Ga0257162_1003001	All Organisms → cellular organisms → Bacteria	1865	Open in IMG/M
3300026351\|Ga0257170_1009317	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp. SCGC AG-212-E16	1202	Open in IMG/M
3300026356\|Ga0257150_1018110	Not Available	981	Open in IMG/M
3300026360\|Ga0257173_1021913	Not Available	807	Open in IMG/M
3300026361\|Ga0257176_1069547	Not Available	567	Open in IMG/M
3300026371\|Ga0257179_1004360	All Organisms → cellular organisms → Bacteria	1276	Open in IMG/M
3300026480\|Ga0257177_1010585	All Organisms → cellular organisms → Bacteria	1218	Open in IMG/M
3300026494\|Ga0257159_1021765	Not Available	1048	Open in IMG/M
3300026497\|Ga0257164_1006235	Not Available	1389	Open in IMG/M
3300026498\|Ga0257156_1054926	Not Available	820	Open in IMG/M
3300026499\|Ga0257181_1064708	Not Available	621	Open in IMG/M
3300026514\|Ga0257168_1001893	Not Available	2930	Open in IMG/M
3300026514\|Ga0257168_1079075	All Organisms → cellular organisms → Bacteria	728	Open in IMG/M
3300026551\|Ga0209648_10393347	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	916	Open in IMG/M
3300026551\|Ga0209648_10504952	Not Available	699	Open in IMG/M
3300026555\|Ga0179593_1167803	Not Available	3217	Open in IMG/M
3300026557\|Ga0179587_10226796	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp. SCGC AG-212-E16	1190	Open in IMG/M
3300027651\|Ga0209217_1136412	Not Available	685	Open in IMG/M
3300027846\|Ga0209180_10067440	All Organisms → cellular organisms → Bacteria	2000	Open in IMG/M
3300027862\|Ga0209701_10548439	Not Available	621	Open in IMG/M
3300027882\|Ga0209590_10008198	All Organisms → cellular organisms → Bacteria	4732	Open in IMG/M
3300027889\|Ga0209380_10534370	Not Available	682	Open in IMG/M
3300028047\|Ga0209526_10072625	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2421	Open in IMG/M
3300028047\|Ga0209526_10793263	Not Available	587	Open in IMG/M
3300028536\|Ga0137415_10125567	All Organisms → Viruses → Predicted Viral	2410	Open in IMG/M
3300028807\|Ga0307305_10467875	Not Available	567	Open in IMG/M
3300028824\|Ga0307310_10641159	Not Available	543	Open in IMG/M
3300028828\|Ga0307312_10454429	Not Available	844	Open in IMG/M
3300028906\|Ga0308309_10424383	All Organisms → Viruses → Predicted Viral	1143	Open in IMG/M
3300028906\|Ga0308309_11606794	Not Available	553	Open in IMG/M
3300029636\|Ga0222749_10111099	All Organisms → cellular organisms → Bacteria → Proteobacteria	1298	Open in IMG/M
(restricted) 3300031150\|Ga0255311_1045374	Not Available	924	Open in IMG/M
(restricted) 3300031197\|Ga0255310_10044046	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1161	Open in IMG/M
(restricted) 3300031248\|Ga0255312_1173153	Not Available	541	Open in IMG/M
3300031421\|Ga0308194_10067614	Not Available	957	Open in IMG/M
3300031720\|Ga0307469_10109844	Not Available	1963	Open in IMG/M
3300031720\|Ga0307469_11026553	Not Available	771	Open in IMG/M
3300031740\|Ga0307468_101899788	Not Available	567	Open in IMG/M
3300031820\|Ga0307473_11319019	Not Available	541	Open in IMG/M
3300032180\|Ga0307471_101104350	Not Available	959	Open in IMG/M
3300032205\|Ga0307472_100128000	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1810	Open in IMG/M
3300033433\|Ga0326726_10016997	All Organisms → cellular organisms → Bacteria	6336	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.14%
Host-Associated	Host-Associated	2.86%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	97.14%
Plants	Host-Associated → Plants	2.86%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	96.43%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.86%
Peat	Environmental → Terrestrial → Peat	0.71%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	65.71%
Loam	Environmental → Terrestrial → Soil → Loam	28.57%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.86%
Sand	Environmental → Terrestrial → Soil → Sand	2.14%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.71%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	34.29%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	21.43%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	15.00%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	11.43%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	10.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.86%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.14%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	2.14%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.71%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	30.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	17.14%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	15.00%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	7.14%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.71%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	4.29%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.29%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	4.29%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.57%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.86%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.14%
Sandy Soil	Environmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil	2.14%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.71%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.71%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2140918013	Soil microbial communities from Great Prairies - Iowa soil (MSU Assemblies)	Environmental	Open in IMG/M
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002886	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300004099	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF236 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004135	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF204 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004137	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF202 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004139	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF230 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300015052	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026285	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm (SPAdes)	Environmental	Open in IMG/M
3300026340	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-04-A	Environmental	Open in IMG/M
3300026351	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-05-B	Environmental	Open in IMG/M
3300026356	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-A	Environmental	Open in IMG/M
3300026360	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-19-B	Environmental	Open in IMG/M
3300026361	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-03-B	Environmental	Open in IMG/M
3300026371	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-01-B	Environmental	Open in IMG/M
3300026480	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-07-B	Environmental	Open in IMG/M
3300026494	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-07-A	Environmental	Open in IMG/M
3300026497	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-08-B	Environmental	Open in IMG/M
3300026498	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-49-A	Environmental	Open in IMG/M
3300026499	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-06-B	Environmental	Open in IMG/M
3300026514	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-B	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026555	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027651	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031150 (restricted)	Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH4_T0_E4	Environmental	Open in IMG/M
3300031197 (restricted)	Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH1_T0_E1	Environmental	Open in IMG/M
3300031248 (restricted)	Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH5_T0_E5	Environmental	Open in IMG/M
3300031421	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
Iowa-Corn-GraphCirc_01678840	2140918013	Soil	MQPRTLELDMPMLRLAALVFSVWVLLSGCTAPIFTYSKGGADAADFRRDSYACVQEPRMSVGASGTPMSVGAGTDGKREAKLYRICMEANGWTAEAPR
ICChiseqgaiiDRAFT_05450171	3300000033	Soil	MQPRTLELDMPMLRLAALVFSVWALLSGCTAPIFTYSKGGADAADFRRDSYACVQEPRMSVGASGTPMSVGAGTDGKREAKLYRICMEANGWTAEAPR*
INPhiseqgaiiFebDRAFT_1013497802	3300000364	Soil	MSQLAVLVFSECILLAGCTGPIYSYSKADSDVADFRRDSYACVQEPRISGDASGAPVNVRASTDGKREAHLYRMCMRARGWT
F24TB_109730751	3300000550	Soil	MQPRTLELDLPMLRLAALVFSVWALLSGCTAPIFTYSKGGADAADFRRDSYACVQEPRMSVGASGTPMSVGADTDGKREAKLYRICMEANGWTAEAPR*
F14TC_1001859722	3300000559	Soil	MSQLAVLVFSECILLAGCTGPIYSYSKADSDVADFRRDSYACVQEPRISGDASGAPVNVRASTDGKREAHLYRMCMRARGWTAEAPQ*
F14TC_1003197871	3300000559	Soil	MTRLAAPVLFSACVLLVGCTGPIYSYSKAGSDAADFSRDSYACVQEPQMSWGVSESPMAVSASDAKRQAHLYYLCMRARGWTAEPP*
JGI1027J11758_124828092	3300000789	Soil	MQPRTFELDLCMLRFAALAFSVWALLSGCTSPIYTYSKGGAEVADFRQDSYACVQEPRISGDASGAPVNVRASTDGKREAHLYRMCMRARGWTAEAPQ*
JGI1027J12803_1035935011	3300000955	Soil	MQPRTFELDLCMLRFAALAFSVWALLSGCTSPIYTYSKGGAEVADFRQDSYACVQEPRMSAGASGNPRSVGASTDGKRESKLYRKCMEANGWTAE
JGI10216J12902_1014867302	3300000956	Soil	MTRLAALVFSAWVLLGGCAKPIYSYSKAGSDVTDFREDSYACIQEQEAQMSWDGSPVTVGASRDAKRQAHLYYMCMRARGWTAEAPQ*
JGI10216J12902_1018787573	3300000956	Soil	MTHLAVLIFSACVLLVGCTGPIYSYSKAGSEAADFRRDSYACVQEPRISRGASETPMTGGASTDGKREAHLYRMCMRARGWTAEAPQ*
JGI10216J12902_1074352321	3300000956	Soil	MLRLAALVFSLWALLSGCTAPIFTYSKGGADAADFRRDSYACVQEPRMSVGASGTPMSGGAGTDGKREAKLYRICMEANGWTAEAPR*
JGIcombinedJ26739_1007037402	3300002245	Forest Soil	MTRFMALVLGVVLFAGCAGPTYSYSKAGSNVADFRQDSYACVQEPRMSWGAGGNPMIVGASTDAKQEATLYRMCMAARGWTAEASR*
JGI25612J43240_10715721	3300002886	Grasslands Soil	ALLAGCTGPTYSYSKAGSDVADFRRDSSACVQEPRMSWGASGNPMIVGASTDAKQEATLYRMCMEARGWTAEASR*
JGI25612J43240_10732541	3300002886	Grasslands Soil	FEVDLPMLRLAALVFSVWGLLSGCTGPTYSYSKAGAAGADFRRDSYACVQEPRLSGGASGTPMSVGASTDAKREAKLYRMCMEATGWTAEAPR*
JGI25617J43924_101369713	3300002914	Grasslands Soil	MTGFMALVLGAALLAGCTGPTYSYSKAGSDVADFRRDSSACVQEPRMSWGASGNPMIVGASTDAKQEATLYRMCMEARGWTAEASR*
Ga0058900_10624211	3300004099	Forest Soil	EVDLPVLRLAALVFSVWGLLSGCTGPTYSYSKAGAEGADFRQDSYACVQEPRLSGGASGTPMIVGGRTDGKREAKLYRMCMEANGWTAEAPR*
Ga0058900_10839393	3300004099	Forest Soil	TFDGNLPMLRVAALVFSAWGLLSGCTGPPYSYSKAGSDVADFRQDSDACVQEPRMSWGASGSPMIVGASSDGNRDASKLYRMCMGARGWTAEAPR*
Ga0058884_13622313	3300004135	Forest Soil	MLRVAALVFSAWGLLSGCTGPPYSYSKAGSDVADFRQDSDACVQEPRMSWGASGSPMIVGASSDGNRDASKLYRMCMGARGWTAEAPR*
Ga0058883_10805962	3300004137	Forest Soil	TFEVDLPVLRLAALVFSVWGLLGGCTGPTYSYSKAGAEGADFRQDSYACVQEPRLSGGASGTPMIVGGRTDGKREAKLYRMCMEANGWTAEAPR*
Ga0058897_100478353	3300004139	Forest Soil	RTFEVDLPVLRLAALVFSVWGLLGGCTGPTYSYSKAGAEGADFRQDSYACVQEPRLSGGASGTPMIVGGRTDGKREAKLYRMCMEANGWTAEAPR*
Ga0070705_1012936431	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MRRNQPLTRLAVLVFSAWVLLVGCTGPVHSYSKVGSDVADFRRDSYACVQEPRVSWAANGSPMTVGASIDVKRQANLYRRCLEARGWESEAPQ*
Ga0070708_1000080341	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MTRFVFLVLGAALLAGCTGPTYSYSKAASDVADFRRDSSACVQEPQMSWGASGNPMIVSASTEAKQETTLYRHGSSGLDGRSAPMTRRRWPSPMSDTTNPASVVW*
Ga0070708_10003614710	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	LTRLAVLVFSAWVLLVGCTGPVHSYSKVGSDVADFRRDSYACVQEPRVSWAANGSPMTVGASIDAKRQANLYRRCLEARGWESEAPQ*
Ga0070708_1001669323	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MLRLAALVFSAWGLLNGCTGPTYSYSKAGSDVGDFRHDSYACVQEPQMSWAAGGSPMIVNASTDGKREAKLYRMCMEANGWTAEAPR*
Ga0070708_1002928662	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MSYSSGTFEGDLAMLRFAALVFSAWGLLNGCTGPTYSYSKAGSDVADFRHDSYACVQEPQMSWAAGGSPMIVNASIDGKRETKLYQMCMEANGWTAEAPR*
Ga0070706_1000297733	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MLRLAALVFSAWVLFAGCTGPTYSYSKTGSDVADFRRDSYGCVREPRMSWSASETPMGVGDPQRQASKLYRTCMEAHGWTAN*
Ga0070706_1001117281	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	LTRLAVLVFSAWVLLVGCTGPVHSYSKVGSDVADFRRDSYACVQEPRVSWAANGSPMTVGASIDAKRQANLYRRCLKARGWASEAPQ*
Ga0070706_1004480111	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MLRLAALVFSAWGLLNGCTGPTYSYSKAGSDVADFRHDSYACVQEPQMSWAAGGSPMIVNASTDGKRAAKLYRMCMEANGWTAEAPR*
Ga0070706_1009103101	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MTGFMALVLGAALLAGCTGPTYSYSKAGSDVADFRRDSSACVQEPRMSWGASGNPMIVGASTDAKQEATLYRMCVEARGWTAEASR*
Ga0070707_1000786906	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MRRNQPLTRLAVLVFSAWVLLVGCTGPVHSYSKVGSDVADFRRDSYACVQEPRVSWAANGSPMTVGASIDAKRQANLYRRCLKARGWASEAPQ*
Ga0070707_1002019942	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	VLRLAALAFSAWVLFAGCTGPTYGYSKAGSDVADFRRDSYACVQEPRMSWGASGNPMIVGASIDGKREANRLYRTCMEARGWTASETTQ*
Ga0070707_1008433092	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MSYSSGTFEGDLAMLRLAALVFSAWGLLNGCTGPTYSYSKAGSDVADFRHDSYACVQEPQMSWAAGGSPMIVNASTDGKRAAKLYRMCMEANGWTAEAPR*
Ga0070698_1013718561	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MKRAAAILVVAVLLAACTGPTYSYTKAGSAVADFRRDSNACVQEPRMSWGASENPTLVGASTDARREANLYRMCMEARGWTAEAPQ*
Ga0070698_1015671121	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	LTRLAVLVFSAWVLLVGCTGPVYSYSKAGSDVADFRRDSYACVQEPRVSWAANGSPMTVGASIDAKRQANLYRRCLKARGWASEAPQ*
Ga0070697_1007035662	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MTRFMALVLGAVMLAGCTGPTYSYSKAASDVTDFRRDSTACVQEPRMSWGASGNPMIVSASTEAKQEATLYRRCMEARGWTAEAPR*
Ga0070766_107536903	3300005921	Soil	LLGGCTGPTYSYSKAGAEGADFRQDSYACVQEPRLSGGASGTPMIVGGRTDGKREAKLYRMCMEANGWTAEAPR*
Ga0070765_1004256783	3300006176	Soil	MRVWTFDGNLPMLRVAALVFSAWGLLSGCTGPPYSYSKAGSDVADFRQDSDACVQEPRMSWGASGSPMIVGARSDGNRDASKLYRMCMGARGWTAEAPR*
Ga0070765_1007412093	3300006176	Soil	AMTRFMALVLGVTLLTGCIGPTYSYSKAGSNVADFRQDSSACVQEPRMSWGASANPMIVGASTDAKRQSSTLYRLCMEARGWTAEAPQ*
Ga0075428_1004889811	3300006844	Populus Rhizosphere	MQPRTLELNLPMLRLAALVFSVWALLSGCTAPIFTYSKGGADAADFRRDSYACVQEPRMSVGASGTPMSVGAGTDGKREAKLYRICMEANGWTAEAPR*
Ga0075421_1001064786	3300006845	Populus Rhizosphere	MQPRTLELNLPMLRLAALVFSVWALLSGCTAPIFTYSKGGADAADFRRDSYTCVQEPRMSVGASGTPMSVGAGTDGKREAKLYRICMEANGWTAEAPR*
Ga0075431_1016142261	3300006847	Populus Rhizosphere	MQPRTLELDLPMRRLAALVFSVWALLSGCTAPIFTYSKGGADAADFRRDSYTCVQEPRMSVGASGTPMSVGAGTDGKREAKLYRICMEANGWTAEAPR*
Ga0099791_100090692	3300007255	Vadose Zone Soil	MQPRTFEVDLPMLRLAALVFSVWGLLSGCTGPTYSYSKAGAAGADFRRDSYACVQEPRLSGGASGTPMSVGGSTDAKREAKLYRMCMEATGWTAEAPR*
Ga0099793_100428873	3300007258	Vadose Zone Soil	MTGFMALVLGAALLAGCTGPTYSYSKAGSDVADFRRDSSACVQEPRMSWGASGNPMIVGASTDAKQEATLYRMCMEARGWTAETSR*
Ga0099794_100039405	3300007265	Vadose Zone Soil	MLRLAVLLFSVLVPLVGCTGPVHSYSKAGSDVADFRRDSDSCVQEPRVSWLANGNLMTVPVGASADAKRQGNMYRRCMEASGWVSEAPQ*
Ga0099794_100089273	3300007265	Vadose Zone Soil	MQPRTFEVDLPMLRLAALVFSVWGLLSGCTGPTYSYSKAGAAGADFRRDSYACVQEPRLSGGASGTPMSVGASTDAKREAKLYRMCMEATGWTAEAPR*
Ga0099795_101388002	3300007788	Vadose Zone Soil	MTGFMALVLGAALLAGCTGPTYSYSKAGSDVADFRRDSSDCVQEPRMSWGASGNPMIVGASTDAKQEATLYRMCMEARGWTAEASR*
Ga0099829_104382853	3300009038	Vadose Zone Soil	VLSAWVLLSGCTGAAYSYSKAGSDVVDFRRDSDACVQEPRMSWGASGNAMIVGASTDAKQEATLYRMCMEARGWTAEAPR*
Ga0099830_103568632	3300009088	Vadose Zone Soil	MTGFMALVLGAALLAGCTGPTYSYSKAGSDVADFRRDSSACVQEPRMSWGASGNPMIVRASTDAKQEATLYRMCMEARGWTAEASR*
Ga0099830_113737792	3300009088	Vadose Zone Soil	MLRLATLVFSAWVLLSGCTSPTYSYSKAGADVAEFRRDSYACVQEPRMSWGASGTPMIVSANNDAKQEATLYRMCMEALGWTADAPQ*
Ga0099830_115042531	3300009088	Vadose Zone Soil	MLRLAAALVFSAWVLFAGCTGPTYGYSKAGSDVADFKRDSYACVQEPRMSWGASGNPMIVGASIDGKREAKRLYRMCMEAHGWTAEAPQ*
Ga0099828_115249561	3300009089	Vadose Zone Soil	MLRLAAVVFSAWVLFSGCTGPTDNYSKAGSDVADFRRDSYACVQDPRMSWGANESPMIVGASIDAKRQASTRYRMCMEAHGWTAEAPQ*
Ga0099827_100826783	3300009090	Vadose Zone Soil	MLRLAALVLSAWVLLSGCTGAAYSYSKAGSDVVDFRRDSDACVQAPRMSWGASGNAMIVGASTDAKQEATLYRMCMEARGWTAEAPR*
Ga0099792_108516371	3300009143	Vadose Zone Soil	MVRLAALVFSAWVLLSGCAGPTYSYSKPDGSPMDFKRDSYACVQEPRMSWGASENPTIVGASTDARREAKRLYRMCMEVRGWTAEASQ*
Ga0114129_100604632	3300009147	Populus Rhizosphere	MQPRTLELDLPMRRLAALVFSVWALLSGCTAPIFTYSKGGADAADFRRDSYACVQEPRMSVGASGTPMSVGAGTDGKREAKLYRICMEANGWTAEAPR*
Ga0126380_119922861	3300010043	Tropical Forest Soil	MLRPAALFFSAAVLFSGCTGSIHSYSKAGSDADKFSDDSYACVQQTRVSLGATADPMIVGASVDTKRQAKLYRRCMEANGWTAEPPR*
Ga0150983_134108752	3300011120	Forest Soil	MTPRTFEVDLPALRLAALVFPVWGLLSGCTGPSYSFSKAGAETADFRQDSYACVQEPRISGGASGTPMIVGGRTDGKREAKLYRMCMEANGWTAEAPR*
Ga0137392_101793463	3300011269	Vadose Zone Soil	MTGFMALVLGAALLAGRTGPTYSYNKAGSDVADFRRDSSACVQEPRMSWGASGNPMIVGASTDAKQEATLYRMCMEARGWTAEASR*
Ga0137392_102853123	3300011269	Vadose Zone Soil	MLRLAALVLSAWVLLSGCTGAAYSYSKAGSDVVDFRRDSDACVQEPRMSWGASGNAMIVGASTDAKQEATLYRMCMEARGWTAEAPR*
Ga0137392_112362052	3300011269	Vadose Zone Soil	MTGFMALVLGAALLAGCAGPTYSYSKAGSDVADFRRDSSACVQEPRMSWGASGNPMIVSASTDAKQEATLYRMCMEARGWTAEASR*
Ga0137391_102001132	3300011270	Vadose Zone Soil	MLRLAAVVFSGWVLLSGCTGPTYSYSKVGSNVAEFRRDSAACVQEPRMAWGASGNPMIVGASLDAKREASVLYRMCMEARGWTAEAPQ*
Ga0137391_103177543	3300011270	Vadose Zone Soil	MTGFMALVLGAALLAGCTGPTYSYSKAGSDVADFRRDSSACVQEPRMSWGASGNPMIVGASTDAKQDATLYRMCMEARGWTAEASR*
Ga0137391_103358513	3300011270	Vadose Zone Soil	MTRFVFLVLGAALLAGCTGPTYSYSKAASDVADFRRDSSACVQEPQMSWGASGNPMIVSASTEAKQETTLYRMCMEARGWTAEAPR*
Ga0137391_112492371	3300011270	Vadose Zone Soil	MFRLAALIFSACVLLAGCTGPTYSYSRPGSDVADFKRESSVCVQEPRMSWGASNSPMIVGGNIDPQRQASNLYRMCMEAHGWTAN*
Ga0137393_107084041	3300011271	Vadose Zone Soil	MKRAAAILVVAVLLAACTGPTYSYTKAGSAVADFRRDSNACVQEPRMPWGASENPTIVGASTDARREANRLYRMCMEARGWTAEAPQ*
Ga0137389_107044711	3300012096	Vadose Zone Soil	MVRLAALVFSAWVLLSGCAGPTYSYSKPDGSPMDFKRDSYACVQEPRMSWGARENPTIVGASTDARREAKRLYRMCMEARGWTAEASL*
Ga0137383_101761902	3300012199	Vadose Zone Soil	MTGFMALVLGAALLAGCTGPTYSYSKAGSDVADFRRDSSACVQEPRMSWVASGNPMIVGASTDAKQEATLYRMCMEARGWTAEASR*
Ga0137362_106941733	3300012205	Vadose Zone Soil	FSAWVLLSGCAGPTYSYSKPDGSPMDFKRDSYACVQEPRMSWGASENPTIVGASTDARREAKRLYRMCMEARGWTAEASL*
Ga0137376_116210562	3300012208	Vadose Zone Soil	MTRFVVLVLGATLLAGCTGPTYSYSKAGSNVADFRQDSYACVQEPRMSWGAGGNPMIVGTSTAAKQEAILYRMCMEARGWTAEASR*
Ga0137386_104316321	3300012351	Vadose Zone Soil	LGAALLAGCTGPTYSYSKAGSDVADFRRDSSACVQEPRMSWVASGNPMIVGASTDATQEATLYRMCMEARGWTAEASR*
Ga0137360_100870534	3300012361	Vadose Zone Soil	MVRLAALVFSAWVLLSGCAGPTYSYSKPDGSPMDFKRDSYACVQEPRMSWGASENPTIVGASTDARREAKRLYRMCMEARGWTAEASL*
Ga0137361_104451183	3300012362	Vadose Zone Soil	AVLLFSVLVPLVGCTGPVHSYSKAGSDVADFRRDSDSCVQEPRVSWLANGNLMTVPVGASADAKRQGNMYRRCMEASGWVSEAPQ*
Ga0137397_100197131	3300012685	Vadose Zone Soil	MQPRTFEVDLPMLRLAALVFSVWGLLSGCTGPTYSYSKAGAAGADFRRDSYACVQEPRLSGGASGTPMSVGASTDAKREAKLYRM
Ga0137395_101497651	3300012917	Vadose Zone Soil	MFRLAALIFSACVLLAGCTGPTYSYSRPGSDVADFKRESSVCVQEPRMSWGASNSPMIVGGNIDPLRQASNLYRMCMEAHGWTAN*
Ga0137359_112343512	3300012923	Vadose Zone Soil	MTGFMALVLGAALLAGCTGPTYSYSKAGSDVADFRRDSSAYVQEPRMSWGASGNPMMVGASTDAKQEATLYRMCMEARGWTAEASR*
Ga0137419_100945013	3300012925	Vadose Zone Soil	MTGFMALVLGAALLAGCTGPTYSYSKAGSDVADFRRDSSACVQEPRMSWGASGNPMIVGASTGAKQEATLYRMCMEARGWTAEASR*
Ga0137416_101590583	3300012927	Vadose Zone Soil	MTGFMALVLGAALLAGCAGPTYSYSKAGSDVADFRRDSSACVQEPRMSWGASGNPMIVGASTDAKQEATLYRMCMEARGWTAEASR*
Ga0137407_122215731	3300012930	Vadose Zone Soil	MLRLAVLLFSVLVPLVGCTGPVHSYSKAGSDVADFRRDSDSCGQEPRVSWLANGSPMTVTVGARVDAKRQGNMDRRCMEASGWVSEAPQ*
Ga0137411_12022811	3300015052	Vadose Zone Soil	MQPRTFEVDLPMLRLAALVFSVWGLLSGCTGPTYSYSKAGAAGADFRRDSYACVQEPRLSGGASGTPMSVGASTDAKREAKLYRMCMEGSDWL
Ga0190265_114993512	3300018422	Soil	MTRLAALVFSVWVLLVGCTGPIHSYSKAGSDVAEFRRDSYACVQEPPMAWGMSWGVNGSPMTVDARTDTKRQAELYQRCMEASGWTSEARQ
Ga0179592_104262921	3300020199	Vadose Zone Soil	MLRLAVLLFSVLVPLVGCTGPVHSYSKAGSDVADFRRDSDSCVQEPRVSWLANGNLMTVPVGASADAKRQGNMYRRCMEASGWVSEAPQ
Ga0210407_100603236	3300020579	Soil	MLRLAALVFSTWVLLVACTGPTHSYSKAGADVADFRRDSHACVQEPRMSWGASESPMIVGASTDVTRQSITLYRRCMEARGWTAEAPQ
Ga0210403_103718602	3300020580	Soil	MPPRTFEVDLPVLRLAALVFSVWGLLSGCTGPTYSYSKAGAEGADFRQDSYACVQEPRLSGGASGTPMIVGGRTDGKREAKLYRMCMEANGWTAEAPR
Ga0210403_106774221	3300020580	Soil	MRVWTFDGNLPMLRVAALVFSAWGLLSGCTGPPYSYSKAGSDVADFRQDSDACVQEPRMSWGASGSPMIVGASSDGNRDASKLYRMCMGARGWTAEAPR
Ga0210399_1001410410	3300020581	Soil	MRVWTFDGNLPMLRLAALVFSAWGLLSGCIGPTYSYSKAGSDVADFRQDSYACVQEPQMSWGASGNPMIVGPSIDGNRDASKLYRMCMGARGWTAEAPR
Ga0210399_101705602	3300020581	Soil	MTPRTFEVDLPALRLAALVFPVWGLLSGCTGPSYSFSKAGAETADFRQDSYACVQEPRISGGASGTPMIVGGRTDGKREAKLYRMCMEASGWTAEAPR
Ga0179596_101047572	3300021086	Vadose Zone Soil	MTGFMALVLGAALLAGCTGPTYSYSKAGSDVADFRRDSSACVQEPRMSWGASGNPMIVGASTDAKQEATLYRMCMEARGWTAEASR
Ga0210404_103955572	3300021088	Soil	MTPRTFEVDLPALRLAALVFPVWGLLSGCTGPSYSFSKAGAETADFRQDSYACVQEPRISGGASGTPMIVGGRTDGKREAKLYRMCMEANG
Ga0210400_107487463	3300021170	Soil	LRLAALVFSAWGLLSGCIGPTYSYSKAGSDVADFRQDSYACVQEPQMSWGASGNPMIVGPSIDGNRDASKLYRMCMGARGWTAEAPR
Ga0210408_102401562	3300021178	Soil	MKGAAAILVVAVLLAACTGPTYSYTKAGSAVADFRRDSNACVQEPRMSWGASENPTIVGASTDARREANRLYRMCMEARGWTAEAPQ
Ga0210394_113565471	3300021420	Soil	MPPRTFEVDLPVLRLAALVFSVWGLLGGCTGPTYSYSKAGAEGADFRQDSYACVQEPRLSGGASGTPMIVGGRTDGKREAKLYRMCMEANGWTAEAPR
Ga0210384_100675383	3300021432	Soil	MTGSCSASRMRLHLADGPPAMTRFMALVLGVTLLTGCIGPTYSYSKAGSNVADFRQDSSACVQEPRMSWGASANPMIVGASTDAKRQSSTLYRLCMEARGWTAEAPQ
Ga0207653_104486241	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	MLRLAALILSACALLAGCTGPTYSYSRPGSDVADFKRESSVCVQEPRMSWGASENSMIVGVSIGSQRQAGRLYRMCMEAQGWTAN
Ga0207684_100186365	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MLRLAALVFSAWGLLNGCTGPTYSYSKAGSDVADFRHDSYACVQEPQMSWAAGGSPMIVNASTDGKRAAKLYRMCMEANGWTAEAPR
Ga0207684_100695942	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MLRLAALVFSAWVLFAGCTGPTYSYSKTGSDVADFRRDSYGCVREPRMSWSASETPMGVGDPQRQASKLYRTCMEAHGWTAN
Ga0207684_101183314	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	LTRLAVLVFSAWVLLVGCTGPVHSYSKVGSDVADFRRDSYACVQEPRVSWAANGSPMTVGASIDAKRQANLYRRCLKARGWASEAPQ
Ga0207646_101661922	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	VLRLAALAFSAWVLFAGCTGPTYGYSKAGSDVADFRRDSYACVQEPRMSWGASGNPMIVGASIDGKREANRLYRTCMEARGWTASETTQ
Ga0207646_111651711	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	LSSHRVLSEDHMRRNQPLTRLAVLVFSAWVLLVGCTGPVHSYSKVGSDVADFRRDSYACVQEPRVSWAANGSPMTVGASIDAKRQANLYRRCLKARGWASEAPQ
Ga0209438_10049834	3300026285	Grasslands Soil	MQPRTFEVDLPMLRLAALVFSVWGLLSGCTGPTYSYSKAGAAGADFRRDSYACVQEPRLSGGASGTPMSVGGSTDAKREAKLYRMCMEATGWTAEAPR
Ga0257162_10030012	3300026340	Soil	MQPRTFEVDLPMLRLAALVFSVWGLLSGCTGPTYSYSKAGAAGADFRRDSYACVQEPRLSGGASGTPMSVGASTDAKREAKLYRMCMEATGWTAEAPR
Ga0257170_10093172	3300026351	Soil	DLPMLRLAALVFSVWGLLSGCTGPTYSYSKAGAAGADFRRDSYACVQEPRLSGGASGTPMSVGASTDAKREAKLYRMCMEATGWTAEAPR
Ga0257150_10181102	3300026356	Soil	MTGFMALVLGAALLAGCTGPTYSYSKAGSDVADFRRDSSACVQEPRMSWGASGNPMIVRASTDAKQEATLYRMCMEARGWTAEASR
Ga0257173_10219132	3300026360	Soil	MTGFMALVLGAALLAGCTGPTYSYSKAGSDVADFRRDSSACVQEPRMSWGASGTPMIVGASTDAKQEATLYRMCMEARGWTAEESR
Ga0257176_10695472	3300026361	Soil	MTGFMALVLGAALLAGCTGPTYSYSKAGSDVADFRRDSDSCVQEPRVSWLANGNLMTVPVGASADAKRQGNMYRRCMEASGWVSEAPQ
Ga0257179_10043601	3300026371	Soil	MLRLAAVVFSAWVLLSGCAGPTYSYSKVGSDVAEFRRDSSACVQEPRMSWGASGNPMIVGASTDAKQEATLYRMCMEARGWTAEASR
Ga0257177_10105853	3300026480	Soil	MTGFMALVLGAALLAGCTGPTYSYSKAGSDVADFRRDSSACVQEPRMSWGASGNPMIVGASTDAKQEATLYRMCMEARGWTAEESRLPRDRIAQSNE
Ga0257159_10217652	3300026494	Soil	MTGFMALVLGAALLAGCTGPTYSYSKAGSDVADFRRDSSACVQEPRMSWGASGNPMIVGASTDAKQEATLYRMCMEARGWTAETSR
Ga0257164_10062351	3300026497	Soil	MLRLAVLLFSVLVPLVGCTGPVHSYSKAGSDVADFRRDSDSCVQEPRVSWLANGNLMTVPVGASADAKRQGNMYRRCMEVSGWVSEAPQ
Ga0257156_10549261	3300026498	Soil	VWGLLSGCTGPTYSYSKAGAAGADFRRDSYACVQEPRLSGGASGTPMSVGASTDAKREAKLYRMCMEATGWTAEAPR
Ga0257181_10647082	3300026499	Soil	AAMTGFMALVLGAALLAGCTGPTYSYSKAGSDVADFRRDSSACVQEPRMSWGASGNPMIVGASTDAKQEATLYRMCMEARGWTAEASR
Ga0257168_10018935	3300026514	Soil	LTRLAVLVFSAWVLLVGCTGPVQSYSKAGSDVADFRRDSYACVQEPRVSWLANGSLMTVTAGASVDAKRQGNLYRRCMEASGWASEAPQ
Ga0257168_10790751	3300026514	Soil	MLRLAVLLFSVLVPLVGCTGPVHSYSKAGSDVADFRRDSDSCVQEPRVSWLANGSPMTVTVGASVDAKRQGNMYRRCMEASGWVSEAPQ
Ga0209648_103933471	3300026551	Grasslands Soil	MQPRTFEVDLPMLRLAALVFSVWGLLSGCTGPTYSYSKAGAAGADFRRDSYACVQEPRLSGGASGTPMSVGASTDAKREAKLYRMCMEATGWTAEAPQ
Ga0209648_105049522	3300026551	Grasslands Soil	MKRAAAILVVAVLLAACTGPTYSYTKAGSAVADFRRDSNACVQEPRMSWGASENPTIVGASTDARREANRLYRMCMEARGWTAEAPQ
Ga0179593_11678034	3300026555	Vadose Zone Soil	APMTGFMALVLGAALLAGCTGPTYSYSKAGSDVADFRRDSSACVQEPRMSWGASGNPMIVGASTDAKQEATLYRMCMEARGLDGRSVPMTQGQDSPVQ
Ga0179587_102267963	3300026557	Vadose Zone Soil	CTGPTYSYSKAGAAGADFRRDSYACVQEPRLSGGASGTPMSVGGSTDAKREAKLYRMCMEATGWTAEAPR
Ga0209217_11364122	3300027651	Forest Soil	MTRFVVLILGATLLAGCTGPTYSYSKAAADVADFRQDSYACVQEPRMSWGASGSPMIVGASIDGNRDASKLYRMCMRAHGWTAEAPR
Ga0209180_100674402	3300027846	Vadose Zone Soil	MTGFMALVLGAALLAGCTGPTYSYSKAGSDVADFRRDSSACVQEPRMSWGASGNPMIVGASTDAKQEATLYRMCMEARGWTAEAPR
Ga0209701_105484392	3300027862	Vadose Zone Soil	AALVFSAWVLLSGCAGPTYSYSKPDGSPMDFKRDSYACVQEPRMSWGASENPTIVGASTDARREAKRLYRMCMEARGWTAEAPR
Ga0209590_100081983	3300027882	Vadose Zone Soil	MLRLAALVLSAWVLLSGCTGAAYSYSKAGSDVVDFRRDSDACVQAPRMSWGASGNAMIVGASTDAKQEATLYRMCMEARGWTAEAPR
Ga0209380_105343701	3300027889	Soil	LVFSVWGLLGGCTGPTYSYSKAGAEGADFRQDSYACVQEPRLSGGASGTPMIVGGRTDGKREAKLYRMCMEANGWTAEAPR
Ga0209526_100726252	3300028047	Forest Soil	MTRFMALVLGVVLFAGCAGPTYSYSKAGSNVADFRQDSYACVQEPRMSWGAGGNPMIVGASTDAKQEATLYRMCMAARGWTAEASR
Ga0209526_107932631	3300028047	Forest Soil	MTGFMALVLGTALLAGCTGPTYSYSKAGSDVADFRRDSFAYVQEPRMSWGASGNPMIVGASTDPKQEATLYRMCMEARGWTAEASR
Ga0137415_101255674	3300028536	Vadose Zone Soil	MTGFMALVLGAALLAGCAGPTYSYSKAGSDVADFRRDSSACVQEPRMSWGASGNPMIVGASTDAKQEATLYRMCMEARGWTAEASR
Ga0307305_104678752	3300028807	Soil	MTRVMALILGVVLFAGCAGPTYSYSKAGSNVADFRQDSCACVQEPRMSWGAGGNPMVVGTSTAAKQEAILYRMCMEARGWTAEASR
Ga0307310_106411591	3300028824	Soil	MTRLMALVLGVVLFAGCAGPTYSYSKSGSNVADFRQDSYACVQEPRMSWGAGGNPISVGASTDAKQEATL
Ga0307312_104544292	3300028828	Soil	MTRLMALVLGVVLFAGCAGPTYSYSKSGSNVADFRQDSYACVQEPRMSWGAGGNPISVGASTDAKQVATLYRMCMEARGWTAEASR
Ga0308309_104243832	3300028906	Soil	MTRFMALVLGVTLLTGCIGPTYSYSKAGSNVADFRQDSSACVQEPRMSWGASANPMIVGASTDAKRQSSTLYRLCMEARGWTAEAPQ
Ga0308309_116067942	3300028906	Soil	CTGPTYSYSKAGAEGADFRQDSYACVQEPRLSGGASGTPMIVGGRTDGKREAKLYRMCMEANGWTAEAPR
Ga0222749_101110993	3300029636	Soil	LGGCTGPTYSYSKAGAEGADFRQDSYACVQEPRLSGGAIGTPMIVGGRTDGKREAKLYRMCMEANGWTAEAPR
(restricted) Ga0255311_10453741	3300031150	Sandy Soil	MLRLAALVFSAWVLLSGCTGPTYSYSKAGSDVADFRRDSYACVQEPRMSWGASGNPMIVGASIDAKREASKLYRMCMEARGWTAN
(restricted) Ga0255310_100440461	3300031197	Sandy Soil	ALVFSAWVLLSGCTGPTYSYSKAGSDVADFRRDSYACVQEPRMSWGASGNPMIVGASIDAKREASKLYRMCMEARGWTAN
(restricted) Ga0255312_11731531	3300031248	Sandy Soil	MLRLAALVFSMWVLLGGCTGPTYSYSKADSDVAEFRRDSDACVQEPRMSWGASGNPMIVGASIDAKRQAGTLYRMCMEAHGWTAN
Ga0308194_100676142	3300031421	Soil	MTRLMALVLGVVLFAGCAGPTYSYSKAGSNVADFRQDSYACVQEPRMSWGAGGNPISVGASTDAKQEATLYRMCMAAQGWTAEASR
Ga0307469_101098444	3300031720	Hardwood Forest Soil	LTRLAVLVFSAWVLLVGCTGPVHSYSKVGSDVADFRRDSYACVQEPRVSWAANGSPMTVGASIDAKRQANLYRRCLEARGWESEAPQ
Ga0307469_110265532	3300031720	Hardwood Forest Soil	MPPCTFEVDLPVLRLAALVFSVWGLLSGCTGPTYSYSKAGAEGADFRQDSYACVQEPRLSGGASGTPMIVGGRTDGKREAKLYRMCMEANGWTAEAPR
Ga0307468_1018997881	3300031740	Hardwood Forest Soil	MQPRTLELDLPMLRLAALVFSVWALLSGCTTPIYTYSKGGADGADFRQDSYACVQKPRMSAGASGTPKSVGASTDGKREAKLYRLCMEANGWTAEAPR
Ga0307473_113190191	3300031820	Hardwood Forest Soil	SHRILSEDHMRRNQPLTRLAVLVFSAWVLLVGCTGPVHSYSKVGSDVADFRRDSYACVQEPRVSWAANGSPMTVGASIDVKRQANLYRRCLEARGWESEAPQ
Ga0307471_1011043502	3300032180	Hardwood Forest Soil	MSKLAVLVFSECILLVGCTGPIYSYSKADSDVADFRQDSYACVQEPRISGDASGAPVNVRASTDGKREAHLYRMCMRARGWTAEAPQ
Ga0307472_1001280002	3300032205	Hardwood Forest Soil	MLRLALILSACALLAGCTGPTYSYSRPGSDVADFKRESSVCVQEPRMSWGASENSMIVGVSIGSQRQAGRLYRMCMEAQGWTAN
Ga0326726_100169972	3300033433	Peat Soil	MTRLMALGLGAVVLLAGCTGPTYSYSKAASDVAGFRRDSYACVQEPRMSWGASENPILVGASIDTKHEASKLYRRCMEAHGWTAN

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters