Metagenome / Metatranscriptome Family F054194

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F054194
Family Type	Metagenome / Metatranscriptome
Number of Sequences	140
Average Sequence Length	91 residues
Representative Sequence	MPARTNRQKISTTIAPENEAFLKSLIKRGKATTLAEAVDRAIAVARRAETRKRLEEATEAYYASLSGEALKEEQQLEEALAYEASQVDFDAE
Number of Associated Samples	106
Number of Associated Scaffolds	140

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	77.14 %
% of genes near scaffold ends (potentially truncated)	22.86 %
% of genes from short scaffolds (< 2000 bps)	75.71 %
Associated GOLD sequencing projects	90
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.52

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (92.857 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (30.000 % of family members)
Environment Ontology (ENVO)	Unclassified (32.143 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (49.286 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 51.67% β-sheet: 0.00% Coil/Unstructured: 48.33%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.52
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.52
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 140 Family Scaffolds
PF02452	PemK_toxin	48.57
PF03237	Terminase_6N	7.86
PF03476	MOSC_N	1.43
PF08734	GYD	0.71
PF13432	TPR_16	0.71
PF13187	Fer4_9	0.71
PF00083	Sugar_tr	0.71
PF13462	Thioredoxin_4	0.71
PF01148	CTP_transf_1	0.71
PF14279	HNH_5	0.71

COG ID	Name	Functional Category	% Frequency in 140 Family Scaffolds
COG2337	mRNA-degrading endonuclease MazF, toxin component of the MazEF toxin-antitoxin module	Defense mechanisms [V]	48.57
COG3217	N-hydroxylaminopurine reductase subunit YcbX, contains MOSC domain	Defense mechanisms [V]	1.43
COG4274	Uncharacterized conserved protein, contains GYD domain	Function unknown [S]	0.71

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	92.86 %
Unclassified	root	N/A	7.14 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	92.86 %
Unclassified	root	N/A	7.14 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	92.86 %
Unclassified	root	N/A	7.14 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	87.86 %
Unclassified	root	N/A	7.14 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.71 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	47.14 %
Unclassified	root	N/A	7.14 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.71 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	47.14 %
Unclassified	root	N/A	7.14 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.71 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	47.14 %
Unclassified	root	N/A	7.14 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.71 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	47.14 %
Unclassified	root	N/A	7.14 %
Sinorhizobium/Ensifer group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group	0.71 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	47.14 %
Unclassified	root	N/A	7.14 %
Ensifer	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Ensifer	0.71 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	47.14 %
Unclassified	root	N/A	7.14 %
Ensifer aridi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Ensifer → Ensifer aridi	0.71 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001593\|JGI12635J15846_10880345	All Organisms → cellular organisms → Bacteria → Acidobacteria	512	Open in IMG/M
3300002245\|JGIcombinedJ26739_101569360	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	555	Open in IMG/M
3300002914\|JGI25617J43924_10248758	Not Available	601	Open in IMG/M
3300002914\|JGI25617J43924_10348183	All Organisms → cellular organisms → Bacteria → Acidobacteria	514	Open in IMG/M
3300003224\|JGI26344J46810_1017976	All Organisms → cellular organisms → Bacteria → Acidobacteria	588	Open in IMG/M
3300003505\|JGIcombinedJ51221_10382954	Not Available	571	Open in IMG/M
3300004080\|Ga0062385_10688736	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Ensifer → Ensifer aridi	657	Open in IMG/M
3300004082\|Ga0062384_100613159	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	738	Open in IMG/M
3300004082\|Ga0062384_101103530	Not Available	572	Open in IMG/M
3300004092\|Ga0062389_101573697	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	840	Open in IMG/M
3300004152\|Ga0062386_101317930	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	601	Open in IMG/M
3300005471\|Ga0070698_100006138	All Organisms → cellular organisms → Bacteria	13090	Open in IMG/M
3300005518\|Ga0070699_101895457	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	545	Open in IMG/M
3300005533\|Ga0070734_10317408	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	891	Open in IMG/M
3300005534\|Ga0070735_10009324	All Organisms → cellular organisms → Bacteria → Acidobacteria	7639	Open in IMG/M
3300005537\|Ga0070730_10161703	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1513	Open in IMG/M
3300005537\|Ga0070730_10326899	All Organisms → cellular organisms → Bacteria → Acidobacteria	1001	Open in IMG/M
3300005537\|Ga0070730_10447358	All Organisms → cellular organisms → Bacteria → Acidobacteria	832	Open in IMG/M
3300005541\|Ga0070733_10109433	All Organisms → cellular organisms → Bacteria	1770	Open in IMG/M
3300005541\|Ga0070733_10712535	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	674	Open in IMG/M
3300005545\|Ga0070695_100040850	All Organisms → cellular organisms → Bacteria → Acidobacteria	2938	Open in IMG/M
3300005547\|Ga0070693_100027153	All Organisms → cellular organisms → Bacteria → Acidobacteria	3099	Open in IMG/M
3300005575\|Ga0066702_10122663	All Organisms → cellular organisms → Bacteria	1511	Open in IMG/M
3300005591\|Ga0070761_10569294	All Organisms → cellular organisms → Bacteria → Acidobacteria	703	Open in IMG/M
3300005591\|Ga0070761_10749138	All Organisms → cellular organisms → Bacteria	613	Open in IMG/M
3300005712\|Ga0070764_10134021	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1350	Open in IMG/M
3300005712\|Ga0070764_10621236	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	660	Open in IMG/M
3300005952\|Ga0080026_10068717	All Organisms → cellular organisms → Bacteria → Acidobacteria	952	Open in IMG/M
3300006046\|Ga0066652_101915601	Not Available	531	Open in IMG/M
3300006047\|Ga0075024_100364994	All Organisms → cellular organisms → Bacteria → Acidobacteria	725	Open in IMG/M
3300006176\|Ga0070765_100974920	All Organisms → cellular organisms → Bacteria → Acidobacteria	801	Open in IMG/M
3300006804\|Ga0079221_10128182	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1293	Open in IMG/M
3300007258\|Ga0099793_10006533	All Organisms → cellular organisms → Bacteria → Acidobacteria	4301	Open in IMG/M
3300007788\|Ga0099795_10344775	All Organisms → cellular organisms → Bacteria → Acidobacteria	665	Open in IMG/M
3300007788\|Ga0099795_10497384	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	568	Open in IMG/M
3300009038\|Ga0099829_10003158	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	9614	Open in IMG/M
3300009038\|Ga0099829_10031999	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3758	Open in IMG/M
3300009038\|Ga0099829_10126133	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2021	Open in IMG/M
3300009038\|Ga0099829_10127403	All Organisms → cellular organisms → Bacteria → Acidobacteria	2011	Open in IMG/M
3300009088\|Ga0099830_11088435	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	663	Open in IMG/M
3300009089\|Ga0099828_10203130	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1769	Open in IMG/M
3300009089\|Ga0099828_10358523	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1314	Open in IMG/M
3300009143\|Ga0099792_10467066	All Organisms → cellular organisms → Bacteria → Acidobacteria	784	Open in IMG/M
3300009545\|Ga0105237_12504430	Not Available	526	Open in IMG/M
3300010048\|Ga0126373_11128658	All Organisms → cellular organisms → Bacteria → Acidobacteria	850	Open in IMG/M
3300010159\|Ga0099796_10040855	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1568	Open in IMG/M
3300010359\|Ga0126376_11059203	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	816	Open in IMG/M
3300010360\|Ga0126372_12334778	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	585	Open in IMG/M
3300011120\|Ga0150983_10262431	All Organisms → cellular organisms → Bacteria → Acidobacteria	575	Open in IMG/M
3300011270\|Ga0137391_10637753	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	890	Open in IMG/M
3300011271\|Ga0137393_11270758	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	624	Open in IMG/M
3300012096\|Ga0137389_10294076	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1374	Open in IMG/M
3300012096\|Ga0137389_10580965	All Organisms → cellular organisms → Bacteria → Acidobacteria	963	Open in IMG/M
3300012096\|Ga0137389_11254901	All Organisms → cellular organisms → Bacteria → Acidobacteria	634	Open in IMG/M
3300012202\|Ga0137363_11774526	Not Available	510	Open in IMG/M
3300012203\|Ga0137399_10013730	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5018	Open in IMG/M
3300012203\|Ga0137399_10317754	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1289	Open in IMG/M
3300012203\|Ga0137399_11283785	All Organisms → cellular organisms → Bacteria → Acidobacteria	616	Open in IMG/M
3300012205\|Ga0137362_11140743	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	662	Open in IMG/M
3300012207\|Ga0137381_11220005	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	645	Open in IMG/M
3300012356\|Ga0137371_10052074	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3166	Open in IMG/M
3300012357\|Ga0137384_10204198	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1653	Open in IMG/M
3300012362\|Ga0137361_10572169	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1036	Open in IMG/M
3300012582\|Ga0137358_10307229	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1077	Open in IMG/M
3300012922\|Ga0137394_10199250	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1709	Open in IMG/M
3300012922\|Ga0137394_10335632	All Organisms → cellular organisms → Bacteria → Acidobacteria	1290	Open in IMG/M
3300012924\|Ga0137413_10440981	All Organisms → cellular organisms → Bacteria → Acidobacteria	946	Open in IMG/M
3300012925\|Ga0137419_11120245	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	656	Open in IMG/M
3300014201\|Ga0181537_10095332	All Organisms → cellular organisms → Bacteria → Acidobacteria	2023	Open in IMG/M
3300014489\|Ga0182018_10000163	All Organisms → cellular organisms → Bacteria	85839	Open in IMG/M
3300015242\|Ga0137412_10574030	All Organisms → cellular organisms → Bacteria → Acidobacteria	856	Open in IMG/M
3300020199\|Ga0179592_10341666	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	660	Open in IMG/M
3300020199\|Ga0179592_10431435	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	572	Open in IMG/M
3300020579\|Ga0210407_10000316	All Organisms → cellular organisms → Bacteria	58097	Open in IMG/M
3300020579\|Ga0210407_10036005	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3682	Open in IMG/M
3300020579\|Ga0210407_10381179	All Organisms → cellular organisms → Bacteria → Acidobacteria	1103	Open in IMG/M
3300020580\|Ga0210403_10017414	All Organisms → cellular organisms → Bacteria → Acidobacteria	5744	Open in IMG/M
3300020580\|Ga0210403_10067973	All Organisms → cellular organisms → Bacteria → Acidobacteria	2862	Open in IMG/M
3300020581\|Ga0210399_10228713	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1549	Open in IMG/M
3300021046\|Ga0215015_10418126	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1610	Open in IMG/M
3300021178\|Ga0210408_10094942	All Organisms → cellular organisms → Bacteria → Acidobacteria	2342	Open in IMG/M
3300021181\|Ga0210388_11564597	Not Available	549	Open in IMG/M
3300021401\|Ga0210393_10026154	All Organisms → cellular organisms → Bacteria → Acidobacteria	4551	Open in IMG/M
3300021401\|Ga0210393_10743392	All Organisms → cellular organisms → Bacteria → Acidobacteria	799	Open in IMG/M
3300021402\|Ga0210385_10146628	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1685	Open in IMG/M
3300021405\|Ga0210387_10001011	All Organisms → cellular organisms → Bacteria → Acidobacteria	20886	Open in IMG/M
3300021420\|Ga0210394_10055669	Not Available	3449	Open in IMG/M
3300021475\|Ga0210392_10817058	All Organisms → cellular organisms → Bacteria → Acidobacteria	696	Open in IMG/M
3300021476\|Ga0187846_10146507	All Organisms → cellular organisms → Bacteria → Acidobacteria	1001	Open in IMG/M
3300021559\|Ga0210409_10096697	All Organisms → cellular organisms → Bacteria → Acidobacteria	2726	Open in IMG/M
3300021559\|Ga0210409_10109117	All Organisms → cellular organisms → Bacteria → Acidobacteria	2548	Open in IMG/M
3300022717\|Ga0242661_1100330	All Organisms → cellular organisms → Bacteria → Acidobacteria	605	Open in IMG/M
3300022724\|Ga0242665_10083294	All Organisms → cellular organisms → Bacteria → Acidobacteria	919	Open in IMG/M
3300022873\|Ga0224550_1023066	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	880	Open in IMG/M
3300024182\|Ga0247669_1044846	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	737	Open in IMG/M
3300024330\|Ga0137417_1232823	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3186	Open in IMG/M
3300026217\|Ga0209871_1081694	All Organisms → cellular organisms → Bacteria → Acidobacteria	625	Open in IMG/M
3300026305\|Ga0209688_1034711	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	966	Open in IMG/M
3300026514\|Ga0257168_1075499	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	746	Open in IMG/M
3300026551\|Ga0209648_10054077	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3424	Open in IMG/M
3300026551\|Ga0209648_10114370	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2189	Open in IMG/M
3300026551\|Ga0209648_10354421	All Organisms → cellular organisms → Bacteria → Acidobacteria	1006	Open in IMG/M
3300026557\|Ga0179587_10759987	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	639	Open in IMG/M
3300027030\|Ga0208240_1026319	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	641	Open in IMG/M
3300027660\|Ga0209736_1148984	All Organisms → cellular organisms → Bacteria → Acidobacteria	622	Open in IMG/M
3300027701\|Ga0209447_10002639	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5374	Open in IMG/M
3300027826\|Ga0209060_10079465	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1548	Open in IMG/M
3300027846\|Ga0209180_10099175	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1659	Open in IMG/M
3300027846\|Ga0209180_10432353	All Organisms → cellular organisms → Bacteria → Acidobacteria	743	Open in IMG/M
3300027853\|Ga0209274_10539837	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	604	Open in IMG/M
3300027857\|Ga0209166_10152775	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1259	Open in IMG/M
3300027862\|Ga0209701_10062819	All Organisms → cellular organisms → Bacteria → Acidobacteria	2363	Open in IMG/M
3300027867\|Ga0209167_10095662	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1514	Open in IMG/M
3300027867\|Ga0209167_10429864	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	721	Open in IMG/M
3300027875\|Ga0209283_10334296	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	996	Open in IMG/M
3300027903\|Ga0209488_10535811	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	855	Open in IMG/M
3300027903\|Ga0209488_10923235	All Organisms → cellular organisms → Bacteria → Acidobacteria	610	Open in IMG/M
3300027908\|Ga0209006_11149236	All Organisms → cellular organisms → Bacteria → Acidobacteria	610	Open in IMG/M
3300027910\|Ga0209583_10109416	All Organisms → cellular organisms → Bacteria → Acidobacteria	1077	Open in IMG/M
3300027915\|Ga0209069_10256906	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	911	Open in IMG/M
3300027986\|Ga0209168_10015732	All Organisms → cellular organisms → Bacteria → Acidobacteria	4365	Open in IMG/M
3300030730\|Ga0307482_1223048	All Organisms → cellular organisms → Bacteria → Acidobacteria	582	Open in IMG/M
3300031231\|Ga0170824_117326875	All Organisms → cellular organisms → Bacteria → Acidobacteria	583	Open in IMG/M
3300031231\|Ga0170824_122837742	All Organisms → cellular organisms → Bacteria → Acidobacteria	1933	Open in IMG/M
3300031663\|Ga0307484_116732	Not Available	534	Open in IMG/M
3300031740\|Ga0307468_100824295	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	794	Open in IMG/M
3300031962\|Ga0307479_10017703	All Organisms → cellular organisms → Bacteria → Acidobacteria	6711	Open in IMG/M
3300031962\|Ga0307479_10070010	All Organisms → cellular organisms → Bacteria → Acidobacteria	3387	Open in IMG/M
3300031962\|Ga0307479_10230394	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1827	Open in IMG/M
3300031962\|Ga0307479_10294699	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1604	Open in IMG/M
3300031962\|Ga0307479_11023709	All Organisms → cellular organisms → Bacteria → Acidobacteria	794	Open in IMG/M
3300032180\|Ga0307471_100185602	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2058	Open in IMG/M
3300032180\|Ga0307471_100872376	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1067	Open in IMG/M
3300032205\|Ga0307472_101006191	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	781	Open in IMG/M
3300032783\|Ga0335079_10002341	All Organisms → cellular organisms → Bacteria → Acidobacteria	21895	Open in IMG/M
3300032805\|Ga0335078_10121460	All Organisms → cellular organisms → Bacteria → Acidobacteria	3736	Open in IMG/M
3300032895\|Ga0335074_10715036	All Organisms → cellular organisms → Bacteria → Acidobacteria	960	Open in IMG/M
3300032898\|Ga0335072_11659833	Not Available	535	Open in IMG/M
3300032954\|Ga0335083_10700972	All Organisms → cellular organisms → Bacteria → Acidobacteria	822	Open in IMG/M
3300033547\|Ga0316212_1009222	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1418	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.57%
Host-Associated	Host-Associated	1.43%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	90.71%
Aquatic	Environmental → Aquatic	7.86%
Plants	Host-Associated → Plants	1.43%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	89.29%
Freshwater	Environmental → Aquatic → Freshwater	5.71%
Sediment	Environmental → Aquatic → Sediment	2.14%
Peat	Environmental → Terrestrial → Peat	0.71%
Cave	Environmental → Terrestrial → Cave	0.71%
Roots	Host-Associated → Plants → Roots	0.71%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.71%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	71.43%
Loam	Environmental → Terrestrial → Soil → Loam	12.14%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	5.71%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.71%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.14%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.71%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.71%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.71%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.71%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	41.43%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	23.57%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	9.29%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	5.71%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.71%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.57%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.86%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.14%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	2.14%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.71%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.71%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.71%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.71%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.71%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	30.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	14.29%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	8.57%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	7.86%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	5.00%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	5.00%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	4.29%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.57%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	3.57%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.86%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.14%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.14%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.14%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.43%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	1.43%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.71%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.71%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.71%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.71%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	0.71%
Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Roots	0.71%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.71%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300003224	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM3	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005533	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005952	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-045	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006047	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014201	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaG	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021046	Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depth	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021476	Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2)	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022717	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-11-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022724	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022873	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P3 10-14	Environmental	Open in IMG/M
3300024182	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK10	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300026217	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-045 (SPAdes)	Environmental	Open in IMG/M
3300026305	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142 (SPAdes)	Environmental	Open in IMG/M
3300026514	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-B	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027030	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF041 (SPAdes)	Environmental	Open in IMG/M
3300027660	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027701	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027826	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027910	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes)	Environmental	Open in IMG/M
3300027915	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)	Environmental	Open in IMG/M
3300027986	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300030730	Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031663	Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300033547	Spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE1	Host-Associated	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12635J15846_108803451	3300001593	Forest Soil	MCLTIVGLLCYTQFGEQLMPAGRRRQKISTTIDPENGAFLRSLIERGKASNLAEAVDRAVTVARRAEARKKLEEATTAYYASLSGEVLKDEQKLERAVGYAASQVDFDGE*
JGIcombinedJ26739_1015693601	3300002245	Forest Soil	MARANRQKISTTIAPENAAFLKSLLKRGKAVTLAEAVDRAISVARRAEARERLEAATEAYFASLSPEALEEENRLGKALSHEADHVNFDE*
JGI25617J43924_102487581	3300002914	Grasslands Soil	MARVNRQKISTTIAPENAAFLKSLLKRGKAVTLAEAVDRAISVARRLEARERLEAATEAYFASLSPEALEEENRLGEALAYETDHVNFDE*
JGI25617J43924_103481832	3300002914	Grasslands Soil	MASRRRRQKISTTIAPENQAFLQSLIKRGKASSLADAVDRAVTVARRADARKKLEDATVAYYASLSGEALKEEQQLEEAVGYAASQVDFDGE*
JGI26344J46810_10179762	3300003224	Bog Forest Soil	MPPRSRRPKISTTIAPENRAFLKSLIKRGKAANLAEAVDSLIEDARQAENRKRLDEATAAFYASLAGDALKHEQELELAVGSAASRVDFDAE*
JGIcombinedJ51221_103829542	3300003505	Forest Soil	MRARRRQKISTTIAPENQAYLRSLIKRGKVSSLGEAVDRVVTMARRCAARKKIEEATTKYYASLSGDALKQEQKLEETVGSVASHVDFDGE*
Ga0062385_106887361	3300004080	Bog Forest Soil	MPARNNRRKISTTIAPENDAFLKSLIRRGKAATLAEAVDRAVSVARRAEARTRLEAATEAYFASMSPEEQEEENRLGEALAYEAGQVNYDE*
Ga0062384_1006131592	3300004082	Bog Forest Soil	MPARSRRPKISTTIAPENRAFLKSLIKRGKAANLAEAVDRLIEDARRAESRGRLEAATETYFTSLSREALEEENLLGEALAYEAGCVNFDE*
Ga0062384_1011035302	3300004082	Bog Forest Soil	MPARSRRPKISTTIAAENRAFLKSLVKRGKAANLAEAVDSLIEDARLAEKRKKLEDTTAAYYASLSGKDLEEEKDLELAVGHATAQVDFDGE*
Ga0062389_1015736971	3300004092	Bog Forest Soil	MPARSRRPKISTTIAPENRAFLKSLIKRGKAANLAEAVDRLIEEARRAESRGRLEAATETYFTSLSREALEEENLLGEALAYEAGCVNFDE*
Ga0062386_1013179302	3300004152	Bog Forest Soil	MPARKRRLKISTTIAPENGAFLRSLVRRGKAATFAEVFDKLLEEAQAAETRERLEKATEAYFASLSPEAQEEERQLGEALAYEAGCVNFDE*
Ga0070698_1000061382	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MSARSRRQKISTTIAPENEAFLRSLIKRGKASNLADAVDRAVTFARRAEARRKLEEATAAYYASLSGDARKKEQQLEKAVGYTALQVDFDGE*
Ga0070699_1018954572	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MSARSRRQKISTTIAPENEAFLRSLIKRGKASNLADAVDRAVTFARRAEARRKLEEATAAYYASLSGDARKKEQQLEKAVGYTALQVDF
Ga0070734_103174083	3300005533	Surface Soil	MARPNRMKISTTIAPENGAFLKSLIHRGKAANMSEAVDRVVSTARRAEARARLEAATEAYFASLSPEAREEETQLGEALSYEAGLIN
Ga0070735_100093245	3300005534	Surface Soil	MAGRNNRQKISTTIAPENGAFLKSLIRRGKASTMAEAVDRAVSIARRAEARARLEAATEAYFASLSPEEQEEESRLSEALAYEAGQVNFDE*
Ga0070730_101617033	3300005537	Surface Soil	MARVNRQKISTTIAPENAAFLKSLLKRGKAVTLAEAVDRAISVARRAEARERLEAATEAYFASLSPEALEEENRLGEALAYETDHVNFDE*
Ga0070730_103268992	3300005537	Surface Soil	MATRSRRQKISTTIALENDAYLKSLVKRGKAANLGEAIDHSVRFARRAEARKKLEEATAAFYASLSGEALREEKKLERAVSTASKRVKYDAE*
Ga0070730_104473581	3300005537	Surface Soil	MPARRHRQKISTTIAPENQAFLQSLIRRGKASSLAEAVDRAVTVARRADARKKLEDASTAYYASLSGEALKEEQQMEAAVGYAASQVDPDGE*
Ga0070733_101094331	3300005541	Surface Soil	MAARNNRQKISTTIAPENGAFLRSLIRRGKASTMAEAVDRAVSVARRAEARARLEAATEAYFASLSPEEQEEDRLLGEALAYEAGKVNFDE*
Ga0070733_107125351	3300005541	Surface Soil	MPARARRPKISTTIAPENRAFLQSLVKKGKAANLSEAVDRAVSIARRADARRRLEDETKDYYASLSGEALKEEQELERAIAHASSQVDFDGE*
Ga0070695_1000408501	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MPARRRQKISTTIAPENQAFLHSLIRRGKASNLAEAMDRALTVARRAEARKRLEDAATAYYTSLSGKALKEEQKLERAVGYAASQVDFDGE*
Ga0070693_1000271535	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	MPARRRQKISTTIAPENQAFLHSLIRRGKASNLAEAMDRALTVARRAEARKRLEDATTAYYTSLSGKALKEEQKLERAVGYAASQVDFDGE*
Ga0066702_101226633	3300005575	Soil	MARANRQKISTTIAPENAAYLRSLQKRGKAVTLAEAVDRAISVARRAEARERLEAATEAYFASLSPEALQEENRLGDALATETDHVNFDE*
Ga0070761_105692941	3300005591	Soil	MPARVRRPKLSTTIAPENRAFLQSLVKRGKAANLSEAVDRAVSIARRADARRRLEDATTAYYASLSGAALKEEQELERAVAHAASQVDFDGE*
Ga0070761_107491382	3300005591	Soil	MASRNNRQKISTTIAPENGEFLRSLIKRGKASTLAEAVDRAVSVARRAEARARLEAATEAYFASLSPEEQEEESRLGEALAYEAGKVNFDE*
Ga0070764_101340212	3300005712	Soil	MPARVRRPKLSTTIAPENRAFLQSLVKRGKAANLSEAVDRAVSIARRADARRRLEDATTAYYASLSGAALKEEQDLERAVAHAASQVDFDGE*
Ga0070764_106212362	3300005712	Soil	MPARARRPKLSTTIAPENQAFLKSLVKRGKAANLADAVDRAVSFARRAEARRKLEKATEDYYASLSGEALREEQELEKALSHATSQIDFDAE*
Ga0080026_100687173	3300005952	Permafrost Soil	VPNRIRRPKLSTTIAPENQEFLRSLIKRGKAANLAEAVDRVLTFARRAAARKKIDEATTAYYASLSGEALKDEQALEEAVGYAASQVDFDGE*
Ga0066652_1019156012	3300006046	Soil	VPIRRNRQKISTTIAAENALFLKSLVKRGKAGTLAEAVDRALSVARRAEARERLEAATEAYFASLSPEALEEENRLGEALSHESGQINFDE*
Ga0075024_1003649942	3300006047	Watersheds	MPPSRRRQKISTTIAPENRAFLQSLIRRGKASSLADAVDRAVTVARRADARKKLEETTTAFYASLSGEALKEEQELEEAVGYAASQVDFDGE*
Ga0070765_1009749202	3300006176	Soil	MPARTRRPKLSTTIAPENQAFLRSLIKRGKAANLAEAVDRAVSVARKADARRKLEEATVAYYASLSGDALREEQQLEDALSQTASQVDFDAE*
Ga0079221_101281823	3300006804	Agricultural Soil	MPARATRQKISTTIAPENEAFLKSLIRRGKASSIAEAVDRAVSMARRAERRRQLEDATAAYYASLDAAALREERDLE
Ga0099793_100065336	3300007258	Vadose Zone Soil	VYTQGEDIFMARVNRQKISTTIAPENAAFLKSLLKRGKAVTLAEAVDRAISVARRAEARERLEAATEAYFASLSPEALEEENRLGEALAYETDHVNFDE*
Ga0099795_103447751	3300007788	Vadose Zone Soil	MPSRRRRQKISTTIAPENEAFLKSLIKRGRASSLADAVDHAVTFARRAEARKRLEQATIAYYASLSGEELKEEQKLERAVGYAASQVDFDGE*
Ga0099795_104973842	3300007788	Vadose Zone Soil	MARANRQKISTTIAPENAAYLRSLQKRGKAVTLAEAVDRAISVARRAEARERLEAATEAYFASLSPEALEEENRLGDALSSETDHVNFDE*
Ga0099829_100031584	3300009038	Vadose Zone Soil	MRYNRQKISTTIAPENEAFLKSLIKRGKAATLAEAVDRAIAVARRAESRERLEAATEAYFASLSPEALEEENRLGEALGYEAGLVNFDE*
Ga0099829_100319993	3300009038	Vadose Zone Soil	MPSRRRRQKISTTIAPENEAFLQSLIKRGRASSLADAVDHAVTFARRAEARKKLEEATIAYYASLSGQALKEEQKLERAVGYAASQVDFDGE*
Ga0099829_101261333	3300009038	Vadose Zone Soil	MSDVCAILSAGEKHMPARRRRQKISTTIAPENQAFLQSLIKRGKASSLADAVDRAVTVARRADARKKLEDASTAYYASLSGEALKEEQQLEAAVGYAASQVDPDGE*
Ga0099829_101274032	3300009038	Vadose Zone Soil	MPARTNRQKISTTIAPENEAFLKSLIKRGKATTLAEAVDRAIAVARRAETRKRLEEATEAYYASLSGEALKEEQQLEEALAYEASQVDFDAE*
Ga0099830_110884351	3300009088	Vadose Zone Soil	MPRAKRQKISTTIAPENQAFLKSLIKRRKAANLAEAVDRAVSIARRADARREIEEATAAYYASLSGKPLREEQELENAVAHAASLVDYD
Ga0099828_102031302	3300009089	Vadose Zone Soil	MRYNRQKISTTIAPENEAFLKSLIKRGKAATLAEAVDRAIAVARRVESRERLEAATEAYFASLSPEALEEENRLGEALGYEAGLVNFDE*
Ga0099828_103585233	3300009089	Vadose Zone Soil	MPSRRRRQKISTTIAPENEAFLQSLIKRGRASSLADAVDHAVTFARRAEARKKLEEATIAYYASLSGEELKEEQKLERAVGYAASQVDFDGE*
Ga0099792_104670662	3300009143	Vadose Zone Soil	MPSRRRRQKISTTIAPENEAFLKSLIKRGRASSLADAVDHAVTFARRAEARKRLEQAMIAYYASLSGKELKEEQKLERAVGYAASQVDFDGE*
Ga0105237_125044302	3300009545	Corn Rhizosphere	QSSLGETTMPARLRRPKISTTIAPENRAFLQSLVKKGKAANLSEAVDRAVSIARRADARRRLEEETTTYYASLSGEALKEEQELERAIAHASSQVDFDGE*
Ga0126373_111286582	3300010048	Tropical Forest Soil	MPTRTRRQKISTTIAPENEAFLRSLIKRGKASNLGDAVDRAVTFARRAEARRKLEEATAAYYASLSGAALKEEQQLERAVGYTALQVDLDGE*
Ga0099796_100408551	3300010159	Vadose Zone Soil	MARANRQKISTTIAPENAAYLRSLQKRGKAVTLAEAVDRAISVARRAEARERLEAATEAYFASLSPEALEEENRLGDALASETDHVNFDE*
Ga0126376_110592032	3300010359	Tropical Forest Soil	MPRAKRHKISTTIAPENQAFLRSLIKRRKAANLAEAVDRAVSIARRADARREIEEATLRYYALLSGNELQQEQELENTVAHAATLVDFDAE*
Ga0126372_123347781	3300010360	Tropical Forest Soil	MLGGNEAPSMPKRARRQKISTTIAPENQAFLKSLVKRGRAANLAEAVDRSISIARRADARKTLEDATAAYYESLSGEALREERELELAV
Ga0150983_102624311	3300011120	Forest Soil	RPMPARSRRPKISTTIAPENRDFLKSLIKRGKASTLSEAVDCSIAVARRAEIRRRLEEATGAYYASLSGEALKEEQQLEEALAYEASQVDFDAE*
Ga0137391_106377533	3300011270	Vadose Zone Soil	IAPENEAFLKSLIKRGKAATLAEAVDRAIAVARRVESRERLEAATEAYFASLSPEALEEENRLGEALGYEAGLVNFDE*
Ga0137393_112707582	3300011271	Vadose Zone Soil	MSDTLVYTQSEDIFMARVNRQKISTTIAPENAAFLKSLLKRGKAVTLAEAVDRAISVARRAEARERLEAATEAYFASLSPEALEEENRLGEALAYETDHVNFDE*
Ga0137389_102940761	3300012096	Vadose Zone Soil	IAPENEAFLKSLIKRGKAATLAEAVDRAIAVARRAESRERLEAATEAYFASLSPEALEEENRLGEALGYEAGLVNFDE*
Ga0137389_105809651	3300012096	Vadose Zone Soil	AILSAGEKHMPARRRRQKISTTIAPENQAFLQSLIKRGKASSLADAVDRAVTVARRADARKKLEDASTAYYASLSGEALKEEQQLEAAVGYAASQVDPDGE*
Ga0137389_112549011	3300012096	Vadose Zone Soil	MPRAKRQKISTTIAPENQAFLKSLIKRRKAANLAEAVDRAVSIARRADARREIEEATAAYYASLSGKPLREEQELENAVAHAASLVDYDAE*
Ga0137363_117745262	3300012202	Vadose Zone Soil	VYTQGEDIFMARVNRQKISTTIAPENAAFLKSLLKRGKAVTLAEAVDRAISVARRAEARERLEAATEAYFASLSPEALEEENRLGEALAYETDHVNFD
Ga0137399_100137306	3300012203	Vadose Zone Soil	LVYTQGEDIFMARVNRQKISTTIAPENAAFLKSLLKRGKAVTLAEAVDRAISVARRAEARERLEAATEAYFASLSPEALEEENRLGEALAYETDHVNFDE*
Ga0137399_103177542	3300012203	Vadose Zone Soil	MARANRQKISTTIAPENAAYLRSLQKRGKAVTLAEAVDRAISVARRVEARERLEAATEAYFASLSPEALEEENRLGDALASETDHVNFDE*
Ga0137399_112837852	3300012203	Vadose Zone Soil	MPSRRRRQKISTTIAPENEAFLKSLIKRGRASSLADAVDHAVTFARRAEARKRLEQATIAYYASLSGEELKEEQKLERVVGYAASQVDFDGE*
Ga0137362_111407431	3300012205	Vadose Zone Soil	TLVYTQGEDIFMARVNRQKISTTIAPENAAFLKSLLKRGKAVTLAEAVDRAISVARRAEARERLEAATEAYFASLSPEALEEENRLGEALAYETDHVNFDE*
Ga0137381_112200052	3300012207	Vadose Zone Soil	MPARKTRRKISTTIAPENAAFLKSMLKRGKVSTLAEAVDRAIAVARRAESRERLEAATEAYFTSLSPEALEEENRLGEALGYEAGLVNFDE*
Ga0137371_100520744	3300012356	Vadose Zone Soil	MRYNRQKISTTIAPENEAFLKLLIKRDKVATRAEAVDRAIAVARRAESRERLEAATEAYFASLSPEALEEENRLGEALGYEAGLVNFDE*
Ga0137384_102041981	3300012357	Vadose Zone Soil	MRYNRQKISTTIAPENEAFLKSLIKRGKAATLAEAVDRAIAVARRAESRERLEAATEAYFASLSPEALEEENRLGEALGYEAGL
Ga0137361_105721691	3300012362	Vadose Zone Soil	ISDTLVYTQGEDIFMARVNRQKISTTIAPENAAFLKSLLKRGKAVTLAEAVDRAISVARRAEASERLEAATEAYFASLSPEALEEENRLGEALAYETDHVNFDE*
Ga0137358_103072292	3300012582	Vadose Zone Soil	MPSRRRRQKISTTIAPENEAFLKSLIKRGRASSLADAVDHAVTFARRAEARKRIEQATIAYYASLSGEELKEEQKLERAVGYAASQVDFDGE*
Ga0137394_101992501	3300012922	Vadose Zone Soil	NAAYLKSLQKRGKAVTLAEAVDRAISVARRAEARERLEAATEAYFASLSPEALEEENRLGDALASETDHVNFDE*
Ga0137394_103356323	3300012922	Vadose Zone Soil	MPSRRRRQKISTTIAPENEAFLKSLIKRGRASSLADAVDHAVTFARRAEARKRLEEATIAYYASLSGEELKEEQKLERAVGYAASQVDFDGE*
Ga0137413_104409813	3300012924	Vadose Zone Soil	MPSRRRRQKISTTIAPENEAFLKSLIKRGRASSLADAVDHAVTFARRAEARKRLEEATIAYYASLSGEELKEEQKLERAVGYTASQVDFDGE*
Ga0137419_111202451	3300012925	Vadose Zone Soil	MARANRQKISTTIAPENAAYLRSLQKRGKAATLAEAVDRAISVARRAEARERLEAATEAYFASLSPEALEEENRLGDALASETDHVNFDE*
Ga0181537_100953323	3300014201	Bog	MPVRTRRPKLSTTIAPENQAFLKSLVKRGKAANLADAVDRAVSFARRAEARRKLEKATEDYYASLSGEALREEQELEKALSHAASQVDFDAE*
Ga0182018_100001635	3300014489	Palsa	MPVRNRRLKISTTIAPENRAFLKSLIKRGSAANFAEAVDSLIEEARRAENRKRLDDATAAFYASLSGDALKQEQELELAVGSAASRVDFDAE*
Ga0137412_105740303	3300015242	Vadose Zone Soil	MPSRRRRQKISTTIAPENEAFLKSLIKRGRASSLADAVDHAVTFARRAEARKRLEQATIAYYASLSGEELKEEQKLERAVGYTASQVDFDGE*
Ga0179592_103416661	3300020199	Vadose Zone Soil	MARANRQKISTTIAPENAAYLRSLQKRGKAVTLAEAVDRAISVARRAEARERLEAATEAYFASLSPDALEEENRLGDALASETDHVNFDE
Ga0179592_104314352	3300020199	Vadose Zone Soil	MPSRRRRQKISTTIAPENEAFLKSLIKRGRASTLADAVDHAVTFARRAEARKRLEQATIAYYASLSGEELKEEQKLERAVGYAASQVDFDGE
Ga0210407_1000031615	3300020579	Soil	MPARANRQKISTTIAPENAAYLKSLLKRGKAGTLSEAVDRSIALARRADNRRRLEEATASYYNSLSGVALEEDRTLERALGHEASQVDFDGE
Ga0210407_100360053	3300020579	Soil	MRAHRQKISTTIAPENEAFLKSLIKRGKASTLAEAVDRAVAVARRAESRERLEAATEAYFASLSPEALEEENRLGEALEYEAGLVNFDE
Ga0210407_103811792	3300020579	Soil	MSARRNRQKISTTIAPENAAYLRSLLKRGKASTLSEAVDSSIALARRADNRRRLEAATAAYYASLSGEALEEERQLEEALGYEASQVDFDGE
Ga0210403_100174148	3300020580	Soil	MPVRRRQKISTTIAPENGAFLQSLIKRGKASNLAEAVDRAVTVARRAEARKKLEDATTAYYASLSGEALKDEQQLEAAVGYAVSQVDPDGE
Ga0210403_100679734	3300020580	Soil	MPARTRRPKLSTTIAPENQAFLRSLIKRGKAANLAEAVDRAVSVARKADARRKLEEATAAYYASLSGNALREEQQLEDALSQAASQVDFDAE
Ga0210399_102287132	3300020581	Soil	MPMRAHRQKISTTIAPENEAFLKSLIKRGKASTLAEAVDRAVAVARRAESRERLEAATEAYFASLSPEALEEENRLGEALEYEAGLVNFDE
Ga0215015_104181263	3300021046	Soil	MSARANRQKISTTIAPENEAFLRSLIKRGKASTLAEAVDRAIAVARRAESRERLEAATEAYFASLSPEALEEENRLGEALAYESGRVNFDE
Ga0210408_100949421	3300021178	Soil	ARRNRQKISTTIAPENAAYLRSLLKRGKASTLSEAVDSSIALARRADNRRRLEAATAAYYASLSGEALEEERQLEEALGYEASQVDFDGE
Ga0210388_115645972	3300021181	Soil	MPARARRPKLSTTIAPENQAFLKSLVKRGKAANLADAVDRAVSFARRAEARRKLEKATEDYYASLSGEALREEQELEKALSHATSQIDFDAE
Ga0210393_100261547	3300021401	Soil	MPARTRRPKLSTTIAPENQAFLRSLIKRGKAANLAEAVDRAVSVARKADARRKLEEATVAYYASLSGDALREEQQLEDALSQTASQVDFDAE
Ga0210393_107433923	3300021401	Soil	SARRNRQKISTTIAPENAAYLRSLLKRGKASTLSEAVDSSIALARRADNRRRLEAATAAYYASLSGEALEEERQLEEALGYEASQVDFDGE
Ga0210385_101466283	3300021402	Soil	MPARVRRPKLSTTIAPENRAFLQSLVKRGKAANLSEAVDRAVSIARRADARRRLEDATTAYYASLSGAALKEEQDLERAVAHAASQVDFDGE
Ga0210387_1000101112	3300021405	Soil	MPARRNRQKISTTIAPENAAYLRSLLKRGKASTLSEAVDSSIALARRADNRRRLEAATAAYYASLSGEALEEERQLEEALGYEASQVDFDGE
Ga0210394_100556695	3300021420	Soil	MPARTRRPKLSTTIAPENQAFLRSLIKRGKAANLAEAVDRAVSVARKADARRKLEEATAAYYASLSGNALREEQQLEDALSQAASQ
Ga0210392_108170582	3300021475	Soil	MPARTRRPKLSTTIAPENQAFLKSLVKHGKAANLGDAVDRAVSFARRAEARRKLEKATEDYYASLSGEALREEQDLERALSHATSQIDFDAE
Ga0187846_101465072	3300021476	Biofilm	MPSRSRRRKISTTIASENQSFLKSLIRRGIAATLAEAVDHAVSVARRAEEREKLEAATEAYYASLSDEDMRAENELGMAISAASSLVDYDAG
Ga0210409_100966973	3300021559	Soil	MPVRANRQKISTTIAAENDAFLKSLIKRGKAANLAEAVDCVVAIARRADSRKRLEDATAAYYASLSGDALKDEQELEAALGNVASQVDFDAE
Ga0210409_101091172	3300021559	Soil	MRARRRQKISTTIAPENQAYLRSLIKRGKVSSLGEAVDRVVTMARRCAARKKIEEATTKYYASLSGDALKQEQKLEETVGSVASHVDFDGE
Ga0242661_11003301	3300022717	Soil	TTIAPENAAYLRSLLKRGKASTLSEAVDSSIALARRADNRRRLEAATAAYYASLSGEALEEERQLEEALGYEASQVDFDGE
Ga0242665_100832943	3300022724	Soil	PVRANRQKISTTIAAENDAFLKSLIKRGKAANLAEAVDCVVAIARRADSRKRLEDATAAYYASLSGDALKDEQELEAALGNVASQVDFDAE
Ga0224550_10230662	3300022873	Soil	MPVRNRRLKISTTIAPENRAFLKSLIKRGSAANFAEAVDSLIEEARRAENRKRLDDATAAFYASLSGDALKQEQELELAVGSAASRVDFDAE
Ga0247669_10448462	3300024182	Soil	MPARRRQKISTTIAPENQAFLHSLIRRGKASNLAEAMDRALTVARRAEARKRLEDAATAYYTSLSGKALKEEQKLERAVGYAASQVDFDGE
Ga0137417_12328231	3300024330	Vadose Zone Soil	ISDTLVYTQGEDIFMARVNRQKISISTTIAPENAAFLKSLLKRGKAVTLAEAVDRAISVARRAEARERLEAATEAYFASLSPEALEEENRLGEALAYETDHVNFDE
Ga0209871_10816942	3300026217	Permafrost Soil	VPNRIRRPKLSTTIAPENQEFLRSLIKRGKAANLAEAVDRVLTFARRAAARKKIDEATTAYYASLSGEALKDEQALEEAVGYAASQVDFDGE
Ga0209688_10347111	3300026305	Soil	VPIRRNRQKISTTIAAENALFLKSLVKHGKAGTLAEAVDRALSVARRAEARERLEAATEAYFASLSPEALEEENRLGEALSHESGQINFDE
Ga0257168_10754991	3300026514	Soil	MARVNRQKISTTIAPENAAFLKSLLKRGKAVTLAEAVDRAISVARRAEARERLEAATEAYFASLSPEALEEENRLGEALAYETDHVNFDE
Ga0209648_100540777	3300026551	Grasslands Soil	MARVNRQKISTTIAPENAAFLKSLLKRGKAVTLAEAVDRAISVARRLEARERLEAATEAYFASLSPEALEEENRLGEALAYETDHVNFDE
Ga0209648_101143702	3300026551	Grasslands Soil	MRYNRQKISTTIAPENEAFLKSLIKRGKAATLAEAVDRAIAVARRAESRERLEAATEAYFASLSPEALEEENRLGEALGYEAGLVNFDE
Ga0209648_103544213	3300026551	Grasslands Soil	MASRRRRQKISTTIAPENQAFLQSLIKRGKASSLADAVDRAVTVARRADARKKLEDATVAYYASLSGEALKEEQQLEEAVGYAASQVDFDGE
Ga0179587_107599871	3300026557	Vadose Zone Soil	MPSRRRRQKISTTIAPENEAFLKSLIKRGRASSLADAVDHAVTFARRAEARKRLEQATIAYYASLSGEELKEEQKLERAVGYAASQVDFDGE
Ga0208240_10263192	3300027030	Forest Soil	PENDAFLRSLIRRGKASTLAEAVDRAVSVARRVEGRARLEAATEAYFSSLSPEEQEEESRLGEALAYEAGRVNFDE
Ga0209736_11489842	3300027660	Forest Soil	MCLTIVGLLCYTQFGEQLMPAGRRRQKISTTIDPENGAFLRSLIERGKASNLAEAVDRAVTVARRAEARKKLEEATTAYYASLSGEVLKDEQKLERAVGYAASQVDFDGE
Ga0209447_100026392	3300027701	Bog Forest Soil	MPPRSRRPKISTTIAPENRAFLKSLIKRGKAANLAEAVDSLIEDARQAENRKRLDEATAAFYASLAGDALKHEQELELAVGSAASRVDFDAE
Ga0209060_100794653	3300027826	Surface Soil	MSARARRPKISTTIAPENRAFLQSLVKKGKAANLSEAVDRAVSIARRADARRRLEDATTDYYASLSGEALKEEQELERAIAHASSQ
Ga0209180_100991753	3300027846	Vadose Zone Soil	MPARTNRQKISTTIAPENEAFLKSLIKRGKATTLAEAVDRAIAVARRAETRKRLEEATEAYYASLSGEALKEEQQLEEALAYEASQVDFDAE
Ga0209180_104323532	3300027846	Vadose Zone Soil	MPSRRRRQKISTTIAPENEAFLQSLIKRGRASSLADAVDHAVTFARRAEARKKLEEATIAYYASLSGEELKEEQKLERAVGYAASQVDFDGE
Ga0209274_105398371	3300027853	Soil	AIMASRNNRQKISTTIAPENGEFLRSLIKRGKASTLAEAVDRAVSVARRAEARARLEAATEAYFASLSPEEQEEESRLGEALAYEAGKVNFDE
Ga0209166_101527751	3300027857	Surface Soil	ARMSDTLVYNRSEDIFMARVNRQKISTTIAPENAAFLKSLLKRGKAVTLAEAVDRAISVARRAEARERLEAATEAYFASLSPEALEEENRLGEALAYETDHVNFDE
Ga0209701_100628193	3300027862	Vadose Zone Soil	MPARRRRQKISTTIAPENQAFLQSLIKRGKASSLADAVDRAVTVARRADARKKLEDASTAYYASLSGEALKEEQQLEAAVGYAASQVDPDGE
Ga0209167_100956621	3300027867	Surface Soil	MAARNNRQKISTTIAPENGAFLRSLIRRGKASTMAEAVDRAVSVARRAEARARLEAATEAYFASLSPEEQEEDRLLGEALAYEAGKVNFDE
Ga0209167_104298641	3300027867	Surface Soil	MPARARRPKISTTIAPENRAFLQSLVKKGKAANLSEAVDRAVSIARRADARRRLEDETKDYYASLSGEALKEEQELERAIAHASSQVDFDGE
Ga0209283_103342962	3300027875	Vadose Zone Soil	MRYNRQKISTTIAPENEAFLKSLIKRGKAATLAEAVDRAIAVARRVESRERLEAATEAYFASLSPEALEEENRLGEALGYEAGLVNFDE
Ga0209488_105358111	3300027903	Vadose Zone Soil	MARANRQKISTTIAPENAAYLRSLQKRGKAVTLAEAVDRAISVARRAEARERLEAATEAYFASLSPEALEEENRLGDALSSETDHVNFDE
Ga0209488_109232352	3300027903	Vadose Zone Soil	MPSRRRRQKISTTIAPENEAFLKSLIKRGRASSLADAVDHAVTFARRAEARKRLEQAMIAYYASLSGKELKEEQKLERAVGYAASQVDFDGE
Ga0209006_111492362	3300027908	Forest Soil	APENQAFLRSLIKRGKAANLAEAVDRAVSVARKADARRKLEEATIAYYASLSGDALREEQQLEDALSQTASQVDFDAE
Ga0209583_101094162	3300027910	Watersheds	MPPSRRRQKISTTIAPENRAFLQSLIRRGKASSLADAVDRAVTVARRADARKKLEETTTAFYASLSGEALKEEQELEETVGYAASQVDFDGE
Ga0209069_102569062	3300027915	Watersheds	MPPSRRRQKISTTIAPENRAFLQSLIRRGKASSLADAVDRAVTVARRADARKKLEETTTAFYASLSGEALKEEQELEEAVGYAASQVDFDGE
Ga0209168_100157321	3300027986	Surface Soil	MAGRNNRQKISTTIAPENGAFLKSLIRRGKASTMAEAVDRAVSIARRAEARARLEAATEAYFASLSPEEQEEESRLSEALAYEAGQVNFDE
Ga0307482_12230481	3300030730	Hardwood Forest Soil	RRQKISTTIDPENGAFLQSLIKRGQASSLGEAVDRAVAIARRAEARKRLEEATTAYYASLSGEELKEERKLERAVGYAASQVDVDGE
Ga0170824_1173268751	3300031231	Forest Soil	TIAPENGAFLRSLIRRGKASTMAEAVDRAVSIARRTERRRQLEDATAAYYASLEGEALREEQELERAVGHATSRVNYDGE
Ga0170824_1228377421	3300031231	Forest Soil	MPVRNRRPKISTTIAPENRDFLNSLIRRGKAANLSEAVDRSITFARRAESRKKLADATAAYYASLSGDALKKEQELEAAIGYEASQVDFDAE
Ga0307484_1167322	3300031663	Hardwood Forest Soil	MPARRRRQKISTTIDPENGAFLQSLIKRGQASSLGEAVDRAVAIARRAEARKRLEEATTAYYASLSGEELKEERKLERAVGYAASQVDVDGE
Ga0307468_1008242952	3300031740	Hardwood Forest Soil	MARANRQKISTTIAPENAAYLRSLQKRGKAVTLAEAVDRAISVARRAEARERLEAATEAYFASLSSEALEEENRLGDALASETDHVNFDE
Ga0307479_1001770310	3300031962	Hardwood Forest Soil	MPARMRRPKISTTIAPENRDFLKSLIKRGKAASLAEAVDSSIDIARRAESRERLEAATEAYFASLSPDALEEENRLGEALAYEAGRINFDE
Ga0307479_100700105	3300031962	Hardwood Forest Soil	QKISTTIDPENGAFLQSLIKRGQASSLGEAVDRAVAIARRAEARKRLEEATTAYYASLSGEELKEERKLERAVGYAASQVDVDGE
Ga0307479_102303943	3300031962	Hardwood Forest Soil	MPARMRRPKISTTIAPENRDFLKSLIKRGKAASLAEAVDSSIDIARRAESRERLEAATEAYFASLSPEALEEENRLGEALAYESGRVNFDE
Ga0307479_102946993	3300031962	Hardwood Forest Soil	MSPRANRQKISTTIAPENQAFLKSLIKRGKASTLAEAVDRAIGVARRAENRKRLEEATTAYYASLSGDALKEEQELEKAVAYEASQVDFDAE
Ga0307479_110237092	3300031962	Hardwood Forest Soil	MPARRRRQKISTTIDPENGAFLQSLIKRGKASSLGEAVDRAVAIARRAEARKKLEEATAAYYASLSGEALKEEQKLERAVGYAASQVDFDGE
Ga0307471_1001856023	3300032180	Hardwood Forest Soil	MPVRANRAKISTTIAAENAAYLKSLVKRGKASTFAEAVDRALTVARRAEARERLEAATEAYFASLSPEAREEENRLAGALSHETDHVNFDE
Ga0307471_1008723763	3300032180	Hardwood Forest Soil	MARVNRQKISTTIAPENAAFLKSLLKRGKAVTLAEAVDRVISVARRAEARERLEAATEAYFASLSPEALEEENRLGEALAYETDHVNFDE
Ga0307472_1010061912	3300032205	Hardwood Forest Soil	MPARARRQKISTTIAPENGAYLKSLIRRGQAANLAEAVDRAVSVARRTDARRRLEAATTAYFDSLSGEDLAEENRLGAALANEADKVNFDE
Ga0335079_1000234118	3300032783	Soil	MPARGNRQKISTTIAPENGAFLKSLIRRGKASSMAEAVDRAVAIARRAENRRQLEEATVAYYASLEGEALREEQALERAVGHATSRVNYDGE
Ga0335078_101214604	3300032805	Soil	MPGRTNRQKISTTIAPENGAFLRSLIRRGKAANMAEAVDRAISTARKAERRRHLEEATAAYYVSLEGDALQAEQDLERAVAHTSTRVDYDGE
Ga0335074_107150361	3300032895	Soil	MAARNNRQKISTTIAPENGAFLKSLICRGKASTLAEAVDRAVSIARRVERRRQLEAATAAYYASLEGEALREEQELERSVGHTTSRVNYDGE
Ga0335072_116598331	3300032898	Soil	MATRNNRQKISTTIAPENGAFLKSLIRRGKASTLAEAVDRAVSIARRVERRRQLEAATAAYYASLEGEALREEQELERSVGHTTSRVNYDGE
Ga0335083_107009721	3300032954	Soil	ARRTKISTTIAPENQAFLKSLVKRGKAANLGDAVDRAVSFARRAEARRKLEKATEDYYASLSGEALREEQELEKALIHATSQIDFDAE
Ga0316212_10092223	3300033547	Roots	MPARKRRLKISTTIAPENRAFLKSLVKRGKAANFAEAFDNLLDEARRAENRERLDRATAEFYASLSGDALKEERELELAVGSAASRVDYDAE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F054194

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences