Metagenome Family F054189

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F054189
Family Type	Metagenome
Number of Sequences	140
Average Sequence Length	42 residues
Representative Sequence	ALASAFVARWCVGAKVETAGGVFQVREDEPEPRVGAGLHRTP
Number of Associated Samples	102
Number of Associated Scaffolds	140

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	5.56 %
% of genes near scaffold ends (potentially truncated)	75.00 %
% of genes from short scaffolds (< 2000 bps)	71.43 %
Associated GOLD sequencing projects	95
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.32

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Unclassified (57.143 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (40.000 % of family members)
Environment Ontology (ENVO)	Unclassified (57.857 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (52.143 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 25.71% β-sheet: 0.00% Coil/Unstructured: 74.29%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.32
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.32
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 140 Family Scaffolds
PF08241	Methyltransf_11	2.14
PF00571	CBS	2.14
PF04392	ABC_sub_bind	1.43
PF13847	Methyltransf_31	1.43
PF02371	Transposase_20	1.43
PF00211	Guanylate_cyc	1.43
PF13417	GST_N_3	1.43
PF03330	DPBB_1	1.43
PF00872	Transposase_mut	0.71
PF13185	GAF_2	0.71
PF07969	Amidohydro_3	0.71
PF13551	HTH_29	0.71
PF04964	Flp_Fap	0.71
PF00313	CSD	0.71
PF14023	DUF4239	0.71
PF04828	GFA	0.71
PF07883	Cupin_2	0.71
PF07721	TPR_4	0.71
PF02586	SRAP	0.71
PF04966	OprB	0.71
PF02646	RmuC	0.71
PF02201	SWIB	0.71
PF05015	HigB-like_toxin	0.71
PF01738	DLH	0.71
PF00903	Glyoxalase	0.71
PF11937	DUF3455	0.71
PF06627	DUF1153	0.71
PF00072	Response_reg	0.71

COG ID	Name	Functional Category	% Frequency in 140 Family Scaffolds
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	1.43
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	1.43
COG3547	Transposase	Mobilome: prophages, transposons [X]	1.43
COG1322	DNA anti-recombination protein (rearrangement mutator) RmuC	Replication, recombination and repair [L]	0.71
COG2135	ssDNA abasic site-binding protein YedK/HMCES, SRAP family	Replication, recombination and repair [L]	0.71
COG3328	Transposase (or an inactivated derivative)	Mobilome: prophages, transposons [X]	0.71
COG3549	Plasmid maintenance system killer protein	Defense mechanisms [V]	0.71
COG3659	Carbohydrate-selective porin OprB	Cell wall/membrane/envelope biogenesis [M]	0.71
COG3791	Uncharacterized conserved protein	Function unknown [S]	0.71
COG3847	Flp pilus assembly protein, pilin Flp	Extracellular structures [W]	0.71
COG5531	DNA-binding SWIB/MDM2 domain	Chromatin structure and dynamics [B]	0.71

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.14 %
All Organisms	root	All Organisms	42.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.14 %
cellular organisms	root	All Organisms → cellular organisms	42.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.14 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	42.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.14 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	28.57 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.14 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	27.14 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.14 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	19.29 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4.29 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.14 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	19.29 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.71 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.14 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	19.29 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.71 %
unclassified Beijerinckiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.14 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	19.29 %
Bradyrhizobium rifense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium rifense	0.71 %
Beijerinckiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	0.71 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005332\|Ga0066388_101714355	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	1112	Open in IMG/M
3300005332\|Ga0066388_102609560	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	920	Open in IMG/M
3300005552\|Ga0066701_10751121	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	583	Open in IMG/M
3300005554\|Ga0066661_10712587	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	589	Open in IMG/M
3300005556\|Ga0066707_10113425	All Organisms → cellular organisms → Bacteria	1681	Open in IMG/M
3300005610\|Ga0070763_10482090	All Organisms → cellular organisms → Bacteria	707	Open in IMG/M
3300005764\|Ga0066903_105169429	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	691	Open in IMG/M
3300005764\|Ga0066903_107527421	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	562	Open in IMG/M
3300005764\|Ga0066903_108302110	Not Available	531	Open in IMG/M
3300006034\|Ga0066656_10518699	Not Available	776	Open in IMG/M
3300006176\|Ga0070765_101030434	Not Available	778	Open in IMG/M
3300009792\|Ga0126374_10079579	All Organisms → cellular organisms → Bacteria	1787	Open in IMG/M
3300010048\|Ga0126373_10343425	Not Available	1502	Open in IMG/M
3300010048\|Ga0126373_10467963	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium rifense	1298	Open in IMG/M
3300010358\|Ga0126370_10220893	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1448	Open in IMG/M
3300010358\|Ga0126370_12565384	Not Available	509	Open in IMG/M
3300010359\|Ga0126376_10294193	Not Available	1408	Open in IMG/M
3300010359\|Ga0126376_10353035	Not Available	1304	Open in IMG/M
3300010360\|Ga0126372_12248072	Not Available	595	Open in IMG/M
3300010361\|Ga0126378_10800001	Not Available	1052	Open in IMG/M
3300010361\|Ga0126378_12859047	Not Available	551	Open in IMG/M
3300010366\|Ga0126379_11296867	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	834	Open in IMG/M
3300010376\|Ga0126381_101080799	Not Available	1159	Open in IMG/M
3300010376\|Ga0126381_103292548	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	637	Open in IMG/M
3300010376\|Ga0126381_103442965	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	622	Open in IMG/M
3300010398\|Ga0126383_10906339	All Organisms → cellular organisms → Bacteria	968	Open in IMG/M
3300011120\|Ga0150983_13124536	Not Available	539	Open in IMG/M
3300012198\|Ga0137364_11119338	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	592	Open in IMG/M
3300012205\|Ga0137362_11079910	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	682	Open in IMG/M
3300012208\|Ga0137376_10868300	Not Available	775	Open in IMG/M
3300012211\|Ga0137377_11225567	Not Available	680	Open in IMG/M
3300012361\|Ga0137360_10088720	Not Available	2339	Open in IMG/M
3300012683\|Ga0137398_11023904	Not Available	572	Open in IMG/M
3300012948\|Ga0126375_10678654	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	799	Open in IMG/M
3300012971\|Ga0126369_11788360	Not Available	703	Open in IMG/M
3300012989\|Ga0164305_10840132	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	766	Open in IMG/M
3300016270\|Ga0182036_10556715	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	915	Open in IMG/M
3300016270\|Ga0182036_11204619	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	630	Open in IMG/M
3300016294\|Ga0182041_10836072	Not Available	824	Open in IMG/M
3300016319\|Ga0182033_10823632	Not Available	819	Open in IMG/M
3300016341\|Ga0182035_11146592	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	693	Open in IMG/M
3300016371\|Ga0182034_11554822	All Organisms → cellular organisms → Bacteria	580	Open in IMG/M
3300016404\|Ga0182037_11727231	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	558	Open in IMG/M
3300016404\|Ga0182037_11888822	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	535	Open in IMG/M
3300016422\|Ga0182039_10130774	All Organisms → cellular organisms → Bacteria	1911	Open in IMG/M
3300020581\|Ga0210399_11053076	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	653	Open in IMG/M
3300020582\|Ga0210395_11335711	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	524	Open in IMG/M
3300021168\|Ga0210406_10819809	Not Available	707	Open in IMG/M
3300021362\|Ga0213882_10364582	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	608	Open in IMG/M
3300021403\|Ga0210397_11616805	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	503	Open in IMG/M
3300021560\|Ga0126371_10397666	Not Available	1519	Open in IMG/M
3300021560\|Ga0126371_13491680	Not Available	531	Open in IMG/M
3300027654\|Ga0209799_1132619	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	567	Open in IMG/M
3300027855\|Ga0209693_10552136	All Organisms → cellular organisms → Bacteria	547	Open in IMG/M
3300031231\|Ga0170824_103283433	All Organisms → cellular organisms → Bacteria	1928	Open in IMG/M
3300031231\|Ga0170824_114028024	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1991	Open in IMG/M
3300031543\|Ga0318516_10038230	All Organisms → cellular organisms → Bacteria	2566	Open in IMG/M
3300031544\|Ga0318534_10500877	Not Available	694	Open in IMG/M
3300031545\|Ga0318541_10440810	All Organisms → cellular organisms → Bacteria	728	Open in IMG/M
3300031573\|Ga0310915_11284188	Not Available	504	Open in IMG/M
3300031668\|Ga0318542_10439038	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	676	Open in IMG/M
3300031679\|Ga0318561_10438153	Not Available	719	Open in IMG/M
3300031680\|Ga0318574_10086407	All Organisms → cellular organisms → Bacteria → Proteobacteria	1719	Open in IMG/M
3300031681\|Ga0318572_10692983	All Organisms → cellular organisms → Bacteria	606	Open in IMG/M
3300031682\|Ga0318560_10044830	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2157	Open in IMG/M
3300031682\|Ga0318560_10161501	Not Available	1188	Open in IMG/M
3300031713\|Ga0318496_10854796	Not Available	501	Open in IMG/M
3300031719\|Ga0306917_11343952	Not Available	552	Open in IMG/M
3300031719\|Ga0306917_11522107	Not Available	514	Open in IMG/M
3300031723\|Ga0318493_10672968	Not Available	579	Open in IMG/M
3300031736\|Ga0318501_10039215	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2149	Open in IMG/M
3300031747\|Ga0318502_10462807	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	758	Open in IMG/M
3300031747\|Ga0318502_10672933	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	625	Open in IMG/M
3300031763\|Ga0318537_10261001	Not Available	642	Open in IMG/M
3300031770\|Ga0318521_10822508	Not Available	566	Open in IMG/M
3300031777\|Ga0318543_10123793	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1124	Open in IMG/M
3300031782\|Ga0318552_10571302	Not Available	577	Open in IMG/M
3300031799\|Ga0318565_10612618	Not Available	523	Open in IMG/M
3300031835\|Ga0318517_10379991	All Organisms → cellular organisms → Bacteria	638	Open in IMG/M
3300031890\|Ga0306925_11980746	Not Available	550	Open in IMG/M
3300031893\|Ga0318536_10434298	All Organisms → cellular organisms → Bacteria	662	Open in IMG/M
3300031896\|Ga0318551_10094751	All Organisms → cellular organisms → Bacteria → Proteobacteria	1581	Open in IMG/M
3300031912\|Ga0306921_10098974	All Organisms → cellular organisms → Bacteria	3378	Open in IMG/M
3300031912\|Ga0306921_11174124	All Organisms → cellular organisms → Bacteria	856	Open in IMG/M
3300031912\|Ga0306921_11833466	Not Available	651	Open in IMG/M
3300031912\|Ga0306921_12518618	Not Available	533	Open in IMG/M
3300031941\|Ga0310912_10481492	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	968	Open in IMG/M
3300031941\|Ga0310912_11169691	All Organisms → cellular organisms → Bacteria	586	Open in IMG/M
3300031942\|Ga0310916_10138009	Not Available	2001	Open in IMG/M
3300031946\|Ga0310910_10236443	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1426	Open in IMG/M
3300031954\|Ga0306926_10375963	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1755	Open in IMG/M
3300031954\|Ga0306926_12038048	Not Available	644	Open in IMG/M
3300032001\|Ga0306922_10916190	All Organisms → cellular organisms → Bacteria	909	Open in IMG/M
3300032001\|Ga0306922_11468059	Not Available	683	Open in IMG/M
3300032001\|Ga0306922_11509913	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	671	Open in IMG/M
3300032041\|Ga0318549_10292041	Not Available	735	Open in IMG/M
3300032051\|Ga0318532_10124470	Not Available	913	Open in IMG/M
3300032055\|Ga0318575_10167973	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1095	Open in IMG/M
3300032055\|Ga0318575_10427520	All Organisms → cellular organisms → Bacteria	672	Open in IMG/M
3300032059\|Ga0318533_10037194	Not Available	3187	Open in IMG/M
3300032059\|Ga0318533_10041255	All Organisms → cellular organisms → Bacteria	3038	Open in IMG/M
3300032059\|Ga0318533_10101130	Not Available	1995	Open in IMG/M
3300032063\|Ga0318504_10567167	Not Available	545	Open in IMG/M
3300032068\|Ga0318553_10315039	Not Available	818	Open in IMG/M
3300032090\|Ga0318518_10387543	All Organisms → cellular organisms → Bacteria	717	Open in IMG/M
3300032091\|Ga0318577_10327931	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	732	Open in IMG/M
3300032261\|Ga0306920_102443915	Not Available	720	Open in IMG/M
3300033289\|Ga0310914_11861888	Not Available	506	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	99.29%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	0.71%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	90.71%
Loam	Environmental → Terrestrial → Soil → Loam	8.57%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	0.71%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	64.29%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	23.57%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.57%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.86%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	0.71%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	40.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	20.71%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	16.43%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.43%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	5.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.86%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.14%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.14%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.43%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.43%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.71%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	0.71%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021362	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R09	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300027651	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027654	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066388_1017143551	3300005332	Tropical Forest Soil	FADATLASAFVARWCVGAKAETAGGVFQVREDDPEPRVGAGLHKIP*
Ga0066388_1026095601	3300005332	Tropical Forest Soil	MLASAFVARWCVGAKVETAGGVFEVREEAPEPRIGAELQRTP*
Ga0066701_107511211	3300005552	Soil	FVARWCAGYGVETAGGTFRVREDESAPRLGAGLHRTP*
Ga0066661_107125872	3300005554	Soil	ASAFVARWCAGYGAETAGGVFRVREDEPAPRLGAGPHRTP*
Ga0066707_101134254	3300005556	Soil	AFVARWCAGYGVETAGGTFRVREDESAPRLGAGLHRTP*
Ga0070763_104820901	3300005610	Soil	GALVCAVSKVETAGGVFRVRDDEPAPRIGAGLHRTP*
Ga0066903_1000813872	3300005764	Tropical Forest Soil	MTLASAFVARWCAASKVETEGGLFRIRDDEPPPRIRAGLHRTP*
Ga0066903_1051694291	3300005764	Tropical Forest Soil	AFVARWCIGFKVETAEGAFRVREDEPAPRVGAGLHRTP*
Ga0066903_1075274211	3300005764	Tropical Forest Soil	ATLASAFVARWCVGAKADTAGGVFRVREDEPEPRIGAGLHRTT*
Ga0066903_1083021102	3300005764	Tropical Forest Soil	LASAFVARWCVGSKVETSGGVLQVREDEPVPRVGAGLHRTP*
Ga0066656_105186992	3300006034	Soil	DAMLAGAFVARWCVGAKAETAGGVFQVREDEPAPRIEAGLHRTP*
Ga0070765_1010304341	3300006176	Soil	AFVARWCVGSKVETAEGVFQVREDEPAPRVGARLHRTP*
Ga0126374_100795791	3300009792	Tropical Forest Soil	DAMLASAFVARWCVGAKVETAGGVFEVREEAPEPRIGAELQRTP*
Ga0126373_103434251	3300010048	Tropical Forest Soil	IHFAGAALTSAFVVRWCFGAKVETAGGVFQVRGDEPAPRVAAGVHRTL*
Ga0126373_104679631	3300010048	Tropical Forest Soil	SAFVAQWRVAAKVETTGGVFQVREDEPAPRVGAGLHRTP*
Ga0126370_102208935	3300010358	Tropical Forest Soil	DATLASAFVARWCVAAKVETAGGVFQVREDEPAPRVGAGLHRTP*
Ga0126370_125653842	3300010358	Tropical Forest Soil	SAFVARWCVGSRVETTGGVFHVREDEPTVRVEAGLHRTP*
Ga0126376_102941931	3300010359	Tropical Forest Soil	GAFVSRWCAGSKVETPGGVFQVREDEPTPRIGAGLHRTP*
Ga0126376_103530351	3300010359	Tropical Forest Soil	TLANAFVVRWCVGSKAETAGGVFLVRKEEPAPRVGAGLHRTP*
Ga0126372_118486711	3300010360	Tropical Forest Soil	LASAFVARWCVASKVEVEGGLFRIRDDHPAPRIPAGVHRTP*
Ga0126372_122480722	3300010360	Tropical Forest Soil	ARWCVGSKIETTGGVFQVREDEPAPRVGSGLHRTP*
Ga0126378_108000011	3300010361	Tropical Forest Soil	DATLANAFVARWCVGSKVATAGGVFQVRVDEPAPGIGAGLHRTP*
Ga0126378_128590471	3300010361	Tropical Forest Soil	ANAFVARWCQGSKAETAGGVFQMREDEPAPRIGAGLHRTP*
Ga0126379_112968672	3300010366	Tropical Forest Soil	FVARWCVGARVEANGGVFQVREDEPMPRLGATLHRTP*
Ga0126379_129027811	3300010366	Tropical Forest Soil	MTLASAFVARWCAASKVETEGGLFRIRDDEPPPRIGARLHRTP*
Ga0126379_135729171	3300010366	Tropical Forest Soil	TLASAFVARWCAGAKTETDGGVFRMREDEPTPRIGAGLHRTP*
Ga0126381_1010807991	3300010376	Tropical Forest Soil	SAFVARWCVAAKVETAGGVFQVREDEPAPRTWAGLHRTP*
Ga0126381_1032925482	3300010376	Tropical Forest Soil	FADATLASAFVARWCVGSKVDTAGGVFQVREDEPAPRVGAGLHRTP*
Ga0126381_1034429652	3300010376	Tropical Forest Soil	SEATLANAFVARWCVGSEVETAGGVFQVREDEPATRVGAGLHRTP*
Ga0126381_1039696871	3300010376	Tropical Forest Soil	IYFRDATLASAFVVRWCAASKVETEGGLFRIRDDEPAPRIGAGLHRTP*
Ga0126383_109063393	3300010398	Tropical Forest Soil	AEATLASAFVARWCVGRKVETTGGVFQVREDEPEARVGAGLHKTP*
Ga0150983_131245361	3300011120	Forest Soil	LASAFVARWCAGARVETAGGVFQVREDEPAPPMGAGLHRTPGGQT*
Ga0137364_111193381	3300012198	Vadose Zone Soil	RPWCIGSKVETAGGVFQVREDEPAPRIGAGLHRTP*
Ga0137362_110799101	3300012205	Vadose Zone Soil	RWCAGYGVETAGGAFRVREDEPAPRLAAGPHSTP*
Ga0137376_108683003	3300012208	Vadose Zone Soil	AFVARWCAGRKVETAAGVFQVREDESTPKVGATLHRTP*
Ga0137377_112255671	3300012211	Vadose Zone Soil	ALASAFVARWCVGAKVETAGGVFQVREDEPEPRVGAGLHRTP*
Ga0137370_108051322	3300012285	Vadose Zone Soil	YFADPTLASAFVVRWYAATKVETAGGVFRVREDESTPRVAAGLHRTP*
Ga0137360_100887201	3300012361	Vadose Zone Soil	RWCVGSKVETAGGVFQVREDEPAPRVGAGLHRTP*
Ga0137398_110239042	3300012683	Vadose Zone Soil	SAFVARWCAGSKVSTIGGVFQVRDDEPAPRVGAGLHSIP*
Ga0137394_107060622	3300012922	Vadose Zone Soil	LAGAFVARWCTGYYKVKTAEGALTVREDEPTPRIGVGLHRTP*
Ga0137359_106403853	3300012923	Vadose Zone Soil	FVARWCAGHKVETAEGVFRARGDEPMARTGAGVTPDA*
Ga0126375_106786542	3300012948	Tropical Forest Soil	ATLASAFVARWCVGSKVETAGGVFHAREDEPSPRVGAGFHRTP*
Ga0126369_117883601	3300012971	Tropical Forest Soil	LASAFVARGCVGSETEATAGVFQVREDEPAPRVGAGLRRTQ*
Ga0164305_108401323	3300012989	Soil	AFVARWCAGPKVETIGGVFQVREDEPAPRIGAGLHRTP*
Ga0182036_105567151	3300016270	Soil	DPALASAFVARWCVRAKVETGGGVFQVREDEPEPRVGAGLHRTP
Ga0182036_112046191	3300016270	Soil	LSIYFGDATLASAFVARWCVGAKVETTGGVFQVREDEPEARVGVGLHKTP
Ga0182041_108360721	3300016294	Soil	FGDAVLASAFVARWCVGAKVETAGGVFQFREDEPETRFEAAMHRTP
Ga0182033_108236321	3300016319	Soil	DAALASAFAARWCVGAKVETAGGVFRVREDEPGPRIAARLHRPP
Ga0182035_111465921	3300016341	Soil	MRCIVRDAPLASAFVARWCVGAKVETTGGGVFPLREDEPEPRVGAGL
Ga0182035_121079082	3300016341	Soil	VSIYFLDATLASAFVARWCTASRVETEGGLFRIREDEPPPRIGAGLHRTP
Ga0182034_115548221	3300016371	Soil	ASAFVARWCVGSKVETTGGVFQVREDEPAPRVGAGLHRTP
Ga0182037_117272311	3300016404	Soil	AFVARWCVGSKVETAGGVFQLHEDKLTPRVSPGLHRTP
Ga0182037_118888221	3300016404	Soil	YFADATLASAFVARWCVGAKVETAGGVFQVREDESEGRVGAGLHKTP
Ga0182039_101307741	3300016422	Soil	ARWCVGAKVETNGGVFQVRENDPEPRVGAALHTTP
Ga0182039_102579734	3300016422	Soil	NATIVGAFVARWCVATRVETIGGVFQIREDEPEPRVGTVLHSTA
Ga0182039_109768863	3300016422	Soil	GRWCVGAKVQTVGGVFQVREDEPEPWVGAGLHKTP
Ga0182038_107442571	3300016445	Soil	LASAFVARWCAASRVETEGGLFRIRDDEPPPRIGAGLHRTP
Ga0210399_110530761	3300020581	Soil	SAFVARWCAGSMVETKDGVFRIRDDGPAPRIGAGLHRTP
Ga0210395_113357112	3300020582	Soil	IRTRWCVGSKVETAGGVFQVREDEPAPRIGVGLHRAP
Ga0210406_108198091	3300021168	Soil	VARWCVGAKVETDGGVFRVREDEPGARVGAGPHKTP
Ga0213882_103645823	3300021362	Exposed Rock	IYFVEATLASAFVARWCVAAKFETVEGVFRMREDEPMPRISAGLHRTP
Ga0210397_116168051	3300021403	Soil	ADATLASAFVARWCAGSKIEATGGVFQVRDDEPVPRVGAGLHRTP
Ga0126371_103976661	3300021560	Tropical Forest Soil	ATLASAFVASWCVGFKVEAAGGVFQVREGEPVPRIGAGLHRTP
Ga0126371_134916801	3300021560	Tropical Forest Soil	ATLASAFVARWCVGSKAETAGGVFQVGEDEPTPRIGARLHRTP
Ga0209217_10457793	3300027651	Forest Soil	NAWGAERIGYKVETAEGALRVREDEPEPRVGGGLHRTP
Ga0209799_11326191	3300027654	Tropical Forest Soil	LANAFVARWCVGARVEANGGVFQVREDEPMPRLGATLHRTP
Ga0209693_105521362	3300027855	Soil	GALVCAVSKVETAGGVFRVRDDEPAPRIGAGLHRTP
Ga0170824_1032834333	3300031231	Forest Soil	FVARWCVGSKVETAGGVFQVREDEPAPRVRAGLHRTP
Ga0170824_1140280245	3300031231	Forest Soil	DATLASAFVARWCQGSNAEIAGGVFQVREDEPAPRIGAGLHRPP
Ga0170819_135377122	3300031469	Forest Soil	AFVARWCVTAKVETAGGVFRVREDEPEPRVRTGLHRTQ
Ga0318516_100382305	3300031543	Soil	FDDATLASAFVARWCLSAKVDTAGGVFQARRDEPGSRIEAGLHRTP
Ga0318534_105008772	3300031544	Soil	ATLASAFVARWCVGPKVETAGGVFQVRENEPEPRVGAGLHRTP
Ga0318541_104408102	3300031545	Soil	LASAFVARWCVGARVETAGGLFQVREDEPEPRVGAGLYRTP
Ga0310915_112841881	3300031573	Soil	AFVARWCVGAKVETAGGVFQFREDEPETRFEAAMHRTP
Ga0318542_104390381	3300031668	Soil	DATLASAFVARWCVGSKVATAGGVFQMREDDPAPRVGAGLYRTP
Ga0318561_104381532	3300031679	Soil	AVLANAFVARWCVGARVEATGGVFQLREGVPVPRLGTTMHRTP
Ga0318574_100864071	3300031680	Soil	AFVARWCVGSKVATAGGVFQMREDDPAPRVGAGLYRTP
Ga0318572_106929832	3300031681	Soil	YFGDATLASAFVARWCVGAKAETAGGVFQVREDEPEPRVAAGLHRTP
Ga0318560_100448301	3300031682	Soil	MLASAFIARWCVGAKVETAGGVFQVHKDQPEPRVGAGLHRTA
Ga0318560_101615013	3300031682	Soil	AFVARWCVGTKVETAGGVFQVREDEPEPRVGAGLHRTP
Ga0318496_108547961	3300031713	Soil	ARWCVRAKVETVGGMFRVREDELKPRIGARLHRTP
Ga0306917_113439521	3300031719	Soil	SIYFADAVLANAFVARWCVGARVEATGGVFQLREGVPVPRLGTTMHRTP
Ga0306917_115221071	3300031719	Soil	ADATLASAFVARWCIGAKVETAGGMFEVREDEPEPRVEAGLHRTP
Ga0318493_106729681	3300031723	Soil	ANTTLARAFVAQWCVGAKAETAGGVFQVREDEPQPRVGAGLHRTP
Ga0318501_100392153	3300031736	Soil	MLASAFIARWCVGAKVETAGGVFQVHKDQPEPRVGAGLHRTARSPYSTRLK
Ga0318502_104628072	3300031747	Soil	DATLANAFVARWCVGAKVEPTGGVFQVREDEPAPRVGAGLHRTP
Ga0318502_106729333	3300031747	Soil	VLNDALSIYFAGATLASAFVARWCVRAKVDTAGGIFRVREDELKPRIGARLHRTP
Ga0318537_102610011	3300031763	Soil	FVTRWCVEAKVETAGGVFQMREDQPEPRVGAVLHRTP
Ga0318521_108225081	3300031770	Soil	IYFGDAAFASAFVARWCVGAKVETACGVFQVREDDPEPRVGSGLHGTP
Ga0318546_111141321	3300031771	Soil	TLASAFVARWCTASRVETEGGLFRIRDDEPPPRIGAGLHRTP
Ga0318543_101237933	3300031777	Soil	MLASAFVARWCAGAKVETAGGVFRVREYEPEPRVGSTLHRTHRDG
Ga0318552_105713021	3300031782	Soil	AFAARWCAGAKVQTTGGVFRVREDEPAPRTVAGTHRTL
Ga0318565_106126181	3300031799	Soil	THFDDATLASAFVARWCLSAKVDTAGGVFQARRDEPGSRIEAGLHRTP
Ga0318568_102386901	3300031819	Soil	ARWCIGAKVETAGGVFQVRDNATGARVGAGLHKTP
Ga0318517_103799911	3300031835	Soil	LFCRCDTLASAFVARWCVGAKVETNGGVFQVRENDPEPRVGAALHTTP
Ga0318517_105414001	3300031835	Soil	GAFVARWCVATRVETTGGVFQIREDEPEPWVEAVLHRTP
Ga0318527_103655762	3300031859	Soil	LASAFVSRWCQTAKIETVGGVFQVREDDPEPRVGAGLHRTP
Ga0306919_114451971	3300031879	Soil	FLDATLASAFVARWCTASRVETEGGLFRIRDDEPPPRIGAGLHRTP
Ga0306925_119807462	3300031890	Soil	LTDATLASAFVTRRRVGAKVETAGGVFQERDDAPEARVGARLP
Ga0318536_104342982	3300031893	Soil	FVARWCVGAKVETNGGVFQVRENDPEPRVGAALHTTP
Ga0318551_100947511	3300031896	Soil	LTHFDDATLASAFVARWCLSAKVDTAGGVFQVRRDEPGSRIGAGLHRTP
Ga0306921_100989741	3300031912	Soil	FGDAALASAFVARWCVGARVETAGGLFQVREDEPEPRVGAGLHRTP
Ga0306921_111741243	3300031912	Soil	FGDAALASAFVARWCVGARVETAGGLFQVREDEPEPRVGAGLYRTP
Ga0306921_118334662	3300031912	Soil	VTRWCVVAKVETTGGFFQVREDEPEPRVGAGLYRTP
Ga0306921_125186181	3300031912	Soil	SAFVARWCVGAKVETAGGVFQVREDEPEPRLGAGLHRTP
Ga0310912_100357281	3300031941	Soil	IYFLDATLASAFVARWCTASRVETEGGLFRIRDDEPPPRIGAGLHRTP
Ga0310912_104814922	3300031941	Soil	DATLASAFVARWCVAAKAETAGGVFQVREDEPAPRVGAGLHPTP
Ga0310912_111696911	3300031941	Soil	AALASAFVARWCVGSKVETTGGVFQVREDEPAPRVGAGLHRTP
Ga0310916_101380091	3300031942	Soil	VRWYVTAKVEPIGGLFQVREGEPEPRVRAALHRTPGAR
Ga0310910_102364431	3300031946	Soil	YFADAALAGAFVVRWYVTAKVEPIGGLFQVREGEPEPRVRAALHRTPGAR
Ga0310910_103808861	3300031946	Soil	AVSIYFAEATLGSAFVARWCVGTRAAAAGGVFQVREDEPEPRVGTG
Ga0306926_103759633	3300031954	Soil	MLASAFIARWCVGAKVETAGGVFQVHKDQPEPRVGAGLHRTARSP
Ga0306926_120380482	3300031954	Soil	RHLDLFRGTLASAFVARRCVGSKVETAGGVFQVREGEPAPRIGAGLHRTP
Ga0307479_105893421	3300031962	Hardwood Forest Soil	MLAGAFVARWCAGSKVETVGGVFQVREDEPAPRVGAGLHRTP
Ga0306922_109161901	3300032001	Soil	AFVARWCVGARVETAGGLFQVREDEPEPRVGAGLYRTP
Ga0306922_114680591	3300032001	Soil	FADAPLASGFVARRCVGSKAEGTGGVFQVREDEPAPQVGAALNRTP
Ga0306922_115099131	3300032001	Soil	ARWCVGSKVETAGGVFQLHEDKLTPRVSPGLHRTP
Ga0318507_102122043	3300032025	Soil	TLASAFVARWCAASKVETEGGLFRIRDDELAPRIAVGLHRTP
Ga0310911_103639231	3300032035	Soil	NATIVGAFVARWCVATRVETTGGVFQIREDEPEPWVEAVLHRTP
Ga0318559_102581291	3300032039	Soil	FVSRWCQTAKIETVGGVFQVREDDPEPRVGAGLHRTP
Ga0318549_102920411	3300032041	Soil	ADATLASALVARWCIGAKVETSGGMFRVREDEPEPRVEAGLHGTP
Ga0318545_103431632	3300032042	Soil	LASAFVARWCVAAKLETTGGVFRVREDEPEPPLRYT
Ga0318558_105678362	3300032044	Soil	ATLASAFVARWCAASKVETEGGLFRIRDDELAPRIAVGLHRTP
Ga0318532_101244701	3300032051	Soil	SRWCQTAKIETVGGVFQVREDDPEPRVGAGLHRTP
Ga0318506_104245811	3300032052	Soil	FVARWCVGTKIQTDGGVFRVREDELEPRFGVGLRRTP
Ga0318575_101679733	3300032055	Soil	ALASAFVSRWCRRAKAETTGGVCQVREDEPEPRVGAGLHRTP
Ga0318575_104275201	3300032055	Soil	CDTLASAFVARWCVGAKVETNGGVFQVRENDPEPRVGAALHTTP
Ga0318533_100371944	3300032059	Soil	MRCIVRDAPLASAFVARWCVGAKVETTGGGVFPLREDEPEPRVGAGLHRTS
Ga0318533_100412551	3300032059	Soil	FVARWCVGARVETAGGLFQVREDEPEPRVGAGLHRTP
Ga0318533_101011306	3300032059	Soil	NAFVARWCVGSKVETAGGVFQMREDEPRRRVGAGLHRTP
Ga0318504_105671671	3300032063	Soil	LANTTLARAFVAQWCVGAKAETAGGVFQVREDEPQPRVGAGLHRTP
Ga0318513_106308002	3300032065	Soil	FVARWCAASKVETEGGLFRIRDDEPVPWIGAGLHRTP
Ga0318553_103150392	3300032068	Soil	GDAALASAFVARWCVGANVETAEGVFQIREDEPKTRFEAGMHRTP
Ga0306924_111485701	3300032076	Soil	DPTLATAFVVRWCAGYQIETTGGVFQVREDEPTPRLGASLHRTP
Ga0306924_117812191	3300032076	Soil	VSIYFLDATLASAFVARWCTASRVETEGGLFRIRDDEPPPRIGAGLHRTP
Ga0318518_103875432	3300032090	Soil	FVARWCVGSRVETTGGVFQVREDEPAPWVGTRQHSIP
Ga0318577_103279311	3300032091	Soil	AALASAFVARWCVGANVETAEGVFQIREDEPKTRFEAGMHRTP
Ga0307471_1003432723	3300032180	Hardwood Forest Soil	PSNPDATLAGAFVARWCAASRVETEGGVFKMRNDEPKPRLGAAPHRIP
Ga0306920_1024439151	3300032261	Soil	VARWCVGTKAETAGGVFQVREDEPEPQVGAGLHRTP
Ga0310914_118618881	3300033289	Soil	YFGDATLASAFVAGWCVGAKVETAGGVLQVRDDEPEPQVGAALHRTP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F054189

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences