Metagenome Family F054118

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F054118
Family Type	Metagenome
Number of Sequences	140
Average Sequence Length	81 residues
Representative Sequence	VSFTERADALLDRIAPVLAGESVELQGAVINDLAAIWIAGHRVEGDRAEGDRFREELLELHARHVRELALMYLGDVDG
Number of Associated Samples	89
Number of Associated Scaffolds	140

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	40.00 %
% of genes near scaffold ends (potentially truncated)	31.43 %
% of genes from short scaffolds (< 2000 bps)	81.43 %
Associated GOLD sequencing projects	72
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.62

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (50.714 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere (13.571 % of family members)
Environment Ontology (ENVO)	Unclassified (50.714 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (84.286 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 58.49% β-sheet: 0.00% Coil/Unstructured: 41.51%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.62
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.62
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 140 Family Scaffolds
PF07589	PEP-CTERM	42.14
PF00145	DNA_methylase	7.86
PF08774	VRR_NUC	5.00
PF01555	N6_N4_Mtase	2.86
PF07120	DUF1376	2.14
PF13481	AAA_25	1.43
PF01541	GIY-YIG	0.71
PF05272	VirE	0.71
PF04480	DUF559	0.71
PF09588	YqaJ	0.71
PF10686	YAcAr	0.71
PF00772	DnaB	0.71
PF05869	Dam	0.71
PF02195	ParBc	0.71
PF02518	HATPase_c	0.71

COG ID	Name	Functional Category	% Frequency in 140 Family Scaffolds
COG0270	DNA-cytosine methylase	Replication, recombination and repair [L]	7.86
COG0863	DNA modification methylase	Replication, recombination and repair [L]	2.86
COG1041	tRNA G10 N-methylase Trm11	Translation, ribosomal structure and biogenesis [J]	2.86
COG2189	Adenine specific DNA methylase Mod	Replication, recombination and repair [L]	2.86
COG3756	Uncharacterized conserved protein YdaU, DUF1376 family	Function unknown [S]	2.14
COG0305	Replicative DNA helicase	Replication, recombination and repair [L]	0.71
COG5545	Predicted P-loop ATPase and inactivated derivatives	Mobilome: prophages, transposons [X]	0.71

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.71 %
All Organisms	root	All Organisms	49.29 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.71 %
cellular organisms	root	All Organisms → cellular organisms	49.29 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.71 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	49.29 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.71 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	45.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.71 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	35.00 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.43 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.71 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	20.71 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3.57 %
Caulobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales	0.71 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.71 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.71 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	17.86 %
Azospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae	1.43 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	1.43 %
Xanthobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	1.43 %
Stellaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Stellaceae	0.71 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.71 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.71 %
Caulobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae	0.71 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.71 %
Roseomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas	17.86 %
unclassified Xanthobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → unclassified Xanthobacteraceae	1.43 %
Azospirillum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum	1.43 %
Methylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	1.43 %
Sinorhizobium/Ensifer group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group	0.71 %
Cupriavidus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Cupriavidus	0.71 %
Stella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Stellaceae → Stella	0.71 %
Phenylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium	0.71 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.71 %
Roseomonas pecuniae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → Roseomonas pecuniae	17.86 %
Xanthobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → unclassified Xanthobacteraceae → Xanthobacteraceae bacterium	1.43 %
Methylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	1.43 %
unclassified Azospirillum	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum → unclassified Azospirillum	0.71 %
Phenylobacterium deserti	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → Phenylobacterium deserti	0.71 %
Cupriavidus metallidurans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Cupriavidus → Cupriavidus metallidurans	0.71 %
Sinorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Sinorhizobium	0.71 %
Stella humosa	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Stellaceae → Stella → Stella humosa	0.71 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.71 %
Roseomonas pecuniae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → Roseomonas pecuniae	17.86 %
Xanthobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → unclassified Xanthobacteraceae → Xanthobacteraceae bacterium	1.43 %
Methylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	1.43 %
Azospirillum sp. B510	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum → unclassified Azospirillum → Azospirillum sp. B510	0.71 %
Sinorhizobium meliloti	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Sinorhizobium → Sinorhizobium meliloti	0.71 %
Phenylobacterium deserti	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → Phenylobacterium deserti	0.71 %
Cupriavidus metallidurans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Cupriavidus → Cupriavidus metallidurans	0.71 %
Stella humosa	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Stellaceae → Stella → Stella humosa	0.71 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.71 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004156\|Ga0062589_100310625	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → Roseomonas pecuniae	1225	Open in IMG/M
3300004157\|Ga0062590_100413301	Not Available	1111	Open in IMG/M
3300004463\|Ga0063356_102038044	Not Available	869	Open in IMG/M
3300004480\|Ga0062592_101730997	All Organisms → cellular organisms → Bacteria → Proteobacteria	609	Open in IMG/M
3300004643\|Ga0062591_100326476	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → Roseomonas pecuniae	1225	Open in IMG/M
3300004643\|Ga0062591_102614156	Not Available	532	Open in IMG/M
3300005093\|Ga0062594_101796169	Not Available	645	Open in IMG/M
3300005093\|Ga0062594_102339534	Not Available	582	Open in IMG/M
3300005093\|Ga0062594_103143168	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	517	Open in IMG/M
3300005288\|Ga0065714_10012196	Not Available	2023	Open in IMG/M
3300005288\|Ga0065714_10067171	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5814	Open in IMG/M
3300005288\|Ga0065714_10086271	All Organisms → cellular organisms → Bacteria	2107	Open in IMG/M
3300005290\|Ga0065712_10242458	Not Available	980	Open in IMG/M
3300005293\|Ga0065715_10098765	All Organisms → cellular organisms → Bacteria	3501	Open in IMG/M
3300005329\|Ga0070683_100000360	All Organisms → cellular organisms → Bacteria → Proteobacteria	31521	Open in IMG/M
3300005329\|Ga0070683_100000651	All Organisms → cellular organisms → Bacteria → Proteobacteria	25067	Open in IMG/M
3300005329\|Ga0070683_100041263	Not Available	4244	Open in IMG/M
3300005329\|Ga0070683_100156081	All Organisms → cellular organisms → Bacteria → Proteobacteria	2164	Open in IMG/M
3300005329\|Ga0070683_100302407	Not Available	1522	Open in IMG/M
3300005329\|Ga0070683_100363444	Not Available	1378	Open in IMG/M
3300005329\|Ga0070683_100600614	Not Available	1053	Open in IMG/M
3300005329\|Ga0070683_100860890	Not Available	869	Open in IMG/M
3300005330\|Ga0070690_101757310	Not Available	505	Open in IMG/M
3300005331\|Ga0070670_100116162	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → Roseomonas pecuniae	2307	Open in IMG/M
3300005331\|Ga0070670_101797966	Not Available	564	Open in IMG/M
3300005334\|Ga0068869_100519493	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	996	Open in IMG/M
3300005334\|Ga0068869_101960138	All Organisms → cellular organisms → Bacteria → Proteobacteria	525	Open in IMG/M
3300005335\|Ga0070666_10671422	Not Available	759	Open in IMG/M
3300005343\|Ga0070687_100210468	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → Roseomonas pecuniae	1184	Open in IMG/M
3300005347\|Ga0070668_100789094	All Organisms → cellular organisms → Bacteria → Proteobacteria	843	Open in IMG/M
3300005347\|Ga0070668_100956391	All Organisms → cellular organisms → Bacteria → Proteobacteria	768	Open in IMG/M
3300005354\|Ga0070675_100312899	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → Roseomonas pecuniae	1386	Open in IMG/M
3300005354\|Ga0070675_100461522	Not Available	1140	Open in IMG/M
3300005354\|Ga0070675_100709813	Not Available	916	Open in IMG/M
3300005354\|Ga0070675_101006817	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	765	Open in IMG/M
3300005355\|Ga0070671_101599142	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	578	Open in IMG/M
3300005364\|Ga0070673_100058704	Not Available	3043	Open in IMG/M
3300005364\|Ga0070673_100154626	Not Available	1945	Open in IMG/M
3300005364\|Ga0070673_100180970	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1805	Open in IMG/M
3300005365\|Ga0070688_100303436	All Organisms → cellular organisms → Bacteria → Proteobacteria	1155	Open in IMG/M
3300005367\|Ga0070667_100553697	All Organisms → cellular organisms → Bacteria → Proteobacteria	1057	Open in IMG/M
3300005367\|Ga0070667_101094434	Not Available	745	Open in IMG/M
3300005441\|Ga0070700_100977488	Not Available	694	Open in IMG/M
3300005441\|Ga0070700_101135322	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	649	Open in IMG/M
3300005455\|Ga0070663_101993964	Not Available	522	Open in IMG/M
3300005466\|Ga0070685_10472598	Not Available	882	Open in IMG/M
3300005530\|Ga0070679_101416511	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → Roseomonas pecuniae	641	Open in IMG/M
3300005535\|Ga0070684_100085436	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2798	Open in IMG/M
3300005535\|Ga0070684_101819461	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	575	Open in IMG/M
3300005548\|Ga0070665_102498087	All Organisms → cellular organisms → Bacteria → Proteobacteria	518	Open in IMG/M
3300005564\|Ga0070664_102227392	Not Available	520	Open in IMG/M
3300005577\|Ga0068857_101457624	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	666	Open in IMG/M
3300005615\|Ga0070702_100014704	Not Available	3977	Open in IMG/M
3300005617\|Ga0068859_101442448	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	759	Open in IMG/M
3300005840\|Ga0068870_11239552	Not Available	541	Open in IMG/M
3300005841\|Ga0068863_101811970	Not Available	620	Open in IMG/M
3300005842\|Ga0068858_100952519	Not Available	840	Open in IMG/M
3300005842\|Ga0068858_102231968	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Sinorhizobium → Sinorhizobium meliloti	541	Open in IMG/M
3300005843\|Ga0068860_100707706	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1017	Open in IMG/M
3300006237\|Ga0097621_100996966	Not Available	783	Open in IMG/M
3300006237\|Ga0097621_101422165	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	657	Open in IMG/M
3300006358\|Ga0068871_101180707	Not Available	717	Open in IMG/M
3300006881\|Ga0068865_100195279	All Organisms → cellular organisms → Bacteria → Proteobacteria	1568	Open in IMG/M
3300006881\|Ga0068865_101326299	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	641	Open in IMG/M
3300009011\|Ga0105251_10135823	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → Roseomonas pecuniae	1114	Open in IMG/M
3300009094\|Ga0111539_10960118	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → Roseomonas pecuniae	994	Open in IMG/M
3300009176\|Ga0105242_10796296	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → Roseomonas pecuniae	935	Open in IMG/M
3300009177\|Ga0105248_12362840	Not Available	605	Open in IMG/M
3300009545\|Ga0105237_11683157	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → Roseomonas pecuniae	642	Open in IMG/M
3300009551\|Ga0105238_12974855	Not Available	509	Open in IMG/M
3300009553\|Ga0105249_10681852	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → Roseomonas pecuniae	1087	Open in IMG/M
3300009553\|Ga0105249_11702289	Not Available	703	Open in IMG/M
3300009553\|Ga0105249_13581792	Not Available	500	Open in IMG/M
3300010401\|Ga0134121_12375779	Not Available	570	Open in IMG/M
3300010403\|Ga0134123_10243807	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum → unclassified Azospirillum → Azospirillum sp. B510	1559	Open in IMG/M
3300010403\|Ga0134123_11102315	Not Available	817	Open in IMG/M
3300011119\|Ga0105246_10037461	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → Roseomonas pecuniae	3255	Open in IMG/M
3300011119\|Ga0105246_10949311	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → Roseomonas pecuniae	775	Open in IMG/M
3300012898\|Ga0157293_10101171	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → Roseomonas pecuniae	743	Open in IMG/M
3300012903\|Ga0157289_10308318	Not Available	563	Open in IMG/M
3300012910\|Ga0157308_10097932	Not Available	860	Open in IMG/M
3300013297\|Ga0157378_11039029	Not Available	855	Open in IMG/M
3300014745\|Ga0157377_10669413	Not Available	749	Open in IMG/M
3300014969\|Ga0157376_11657781	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → unclassified Xanthobacteraceae → Xanthobacteraceae bacterium	674	Open in IMG/M
3300014969\|Ga0157376_12320178	Not Available	576	Open in IMG/M
3300015077\|Ga0173483_10292991	Not Available	793	Open in IMG/M
3300015371\|Ga0132258_13558027	Not Available	1066	Open in IMG/M
3300015373\|Ga0132257_102191623	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → unclassified Xanthobacteraceae → Xanthobacteraceae bacterium	715	Open in IMG/M
3300015373\|Ga0132257_104444634	Not Available	510	Open in IMG/M
3300015374\|Ga0132255_103106784	Not Available	708	Open in IMG/M
3300019361\|Ga0173482_10432821	Not Available	620	Open in IMG/M
3300024055\|Ga0247794_10257352	Not Available	578	Open in IMG/M
3300025315\|Ga0207697_10086895	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → Roseomonas pecuniae	1322	Open in IMG/M
3300025901\|Ga0207688_11074255	Not Available	508	Open in IMG/M
3300025903\|Ga0207680_10514154	Not Available	853	Open in IMG/M
3300025903\|Ga0207680_10674202	Not Available	741	Open in IMG/M
3300025908\|Ga0207643_10852711	Not Available	590	Open in IMG/M
3300025918\|Ga0207662_10256384	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1150	Open in IMG/M
3300025918\|Ga0207662_10495486	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → Roseomonas pecuniae	841	Open in IMG/M
3300025925\|Ga0207650_10482734	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → Roseomonas pecuniae	1034	Open in IMG/M
3300025926\|Ga0207659_10172561	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → Roseomonas pecuniae	1707	Open in IMG/M
3300025926\|Ga0207659_10254412	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → Roseomonas pecuniae	1426	Open in IMG/M
3300025930\|Ga0207701_10009565	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	9559	Open in IMG/M
3300025930\|Ga0207701_10026491	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Cupriavidus → Cupriavidus metallidurans	5505	Open in IMG/M
3300025930\|Ga0207701_10032034	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → Phenylobacterium deserti	4953	Open in IMG/M
3300025930\|Ga0207701_10038001	All Organisms → cellular organisms → Bacteria → Proteobacteria	4496	Open in IMG/M
3300025930\|Ga0207701_10872675	Not Available	755	Open in IMG/M
3300025934\|Ga0207686_10069610	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2258	Open in IMG/M
3300025934\|Ga0207686_10626987	Not Available	849	Open in IMG/M
3300025936\|Ga0207670_10615851	Not Available	893	Open in IMG/M
3300025936\|Ga0207670_11053606	Not Available	685	Open in IMG/M
3300025937\|Ga0207669_10624747	Not Available	878	Open in IMG/M
3300025938\|Ga0207704_11729575	Not Available	538	Open in IMG/M
3300025940\|Ga0207691_10201564	Not Available	1731	Open in IMG/M
3300025941\|Ga0207711_11100270	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → Roseomonas pecuniae	735	Open in IMG/M
3300025941\|Ga0207711_11555712	Not Available	604	Open in IMG/M
3300025942\|Ga0207689_11759047	Not Available	512	Open in IMG/M
3300025944\|Ga0207661_10000162	All Organisms → cellular organisms → Bacteria → Proteobacteria	43178	Open in IMG/M
3300025944\|Ga0207661_10005924	Not Available	8629	Open in IMG/M
3300025944\|Ga0207661_10104863	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → Roseomonas pecuniae	2381	Open in IMG/M
3300025944\|Ga0207661_10117189	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum	2262	Open in IMG/M
3300025944\|Ga0207661_10406650	Not Available	1235	Open in IMG/M
3300025944\|Ga0207661_10706555	Not Available	927	Open in IMG/M
3300025944\|Ga0207661_11575421	Not Available	601	Open in IMG/M
3300025960\|Ga0207651_10056373	Not Available	2704	Open in IMG/M
3300026023\|Ga0207677_11387161	Not Available	647	Open in IMG/M
3300026035\|Ga0207703_10258473	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → Roseomonas pecuniae	1573	Open in IMG/M
3300026035\|Ga0207703_11345897	Not Available	687	Open in IMG/M
3300026075\|Ga0207708_10798005	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → Roseomonas pecuniae	813	Open in IMG/M
3300026095\|Ga0207676_10005171	All Organisms → cellular organisms → Bacteria	9230	Open in IMG/M
3300026121\|Ga0207683_10800904	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → Roseomonas pecuniae	874	Open in IMG/M
3300028379\|Ga0268266_10147799	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Stellaceae → Stella → Stella humosa	2115	Open in IMG/M
3300028379\|Ga0268266_10230991	All Organisms → cellular organisms → Bacteria	1704	Open in IMG/M
3300028379\|Ga0268266_10956579	Not Available	829	Open in IMG/M
3300028381\|Ga0268264_11177064	Not Available	776	Open in IMG/M
3300031547\|Ga0310887_10883206	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	565	Open in IMG/M
3300031944\|Ga0310884_11073218	Not Available	503	Open in IMG/M
3300032075\|Ga0310890_10237596	Not Available	1274	Open in IMG/M
3300032122\|Ga0310895_10021942	All Organisms → cellular organisms → Bacteria	2077	Open in IMG/M
3300033412\|Ga0310810_10738957	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → Roseomonas pecuniae	905	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	59.29%
Environmental	Environmental	40.71%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	59.29%
Terrestrial	Environmental → Terrestrial	40.71%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	40.71%
Rhizosphere	Host-Associated → Plants → Rhizosphere	34.29%
Rhizoplane	Host-Associated → Plants → Rhizoplane	22.86%
Roots	Host-Associated → Plants → Roots	2.14%

Habitat	Taxonomy	Distribution
Loam	Environmental → Terrestrial → Soil → Loam	21.43%
Soil	Host-Associated → Plants → Rhizosphere → Soil	20.71%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	19.29%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	15.71%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	13.57%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	6.43%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	2.14%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.71%

Habitat	Taxonomy	Distribution
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	21.43%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	20.71%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	15.71%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	13.57%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	6.43%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	6.43%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	6.43%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.57%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.86%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	2.14%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.71%

Habitat	Taxonomy	Distribution
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	13.57%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	12.86%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	6.43%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	6.43%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	5.71%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	5.71%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	5.71%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	5.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.29%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	3.57%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	3.57%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.86%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.86%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.86%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.86%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.14%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	2.14%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.43%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.43%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.43%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.71%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.71%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.71%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.71%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.71%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005288	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1	Host-Associated	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300009011	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012898	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S194-509B-1	Environmental	Open in IMG/M
3300012903	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S134-311R-1	Environmental	Open in IMG/M
3300012910	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S198-509B-2	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300024055	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S046-202B-6	Environmental	Open in IMG/M
3300025315	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Host-Associated	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031944	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032122	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D4	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0062589_1003106253	3300004156	Soil	VSAASADAAGFGEEADALLERIMPFLAGHDPELQGAVVTDLAALWIAGHRVEGSRAEGDRMRGELLEVYLQHVRELVEMY
Ga0062590_1004133011	3300004157	Soil	PDADVAGFAAGADALLERIAPILAGQPVELQGAVVSDLAAIWIAGHRVENGRAEGDRMRAELLQMHAEHVRELVEIYLDGVDG*
Ga0063356_1020380443	3300004463	Arabidopsis Thaliana Rhizosphere	VSDASADAAGFGEEADALLERIMPFLAGHDPELQGAVVTDLAALWIAGHRVEGSRAEGDRMRGELLEVYLQHVRELVEMYLEGVDG*
Ga0062592_1017309972	3300004480	Soil	MTDADDSERLGEQADAIVDRIRPILAGSDAELQGAVICDLAALWIAGHRIAGDRAEGDAMRAELLEMHTRHVRELVAMYLEGVDG*
Ga0062591_1003264763	3300004643	Soil	VSDASADAAGFGEEVDALLERIMPFLAGHDPELQGAVVTDLAALWIAGHRVEGSRAEGDRMRGELLEVYLQHVRELVEMY
Ga0062591_1026141563	3300004643	Soil	EQVDALLDRIAPILAGESIEMQGAVVSDLAALWIAGHRVRGDRAEGDRAREELLRMHAAHVRELVAMYLGDADG*
Ga0062594_1017961691	3300005093	Soil	VSLPDPDADVAGFAAGADALLERIAPILAGQPVELQGAVVSDLAAIWIAGHRVENGRAEGDRMRAELLQMHAEHVRELVEIYLDGVDG*
Ga0062594_1023395342	3300005093	Soil	RLIERIAPILAGQLAELQGAVVADLAAIWIAGHRNGSRAEGDAMREELIEMHTRHVRELVCAYLGDIDG*
Ga0062594_1031431682	3300005093	Soil	MSADAEADPVRFGAAADALLDRIKPLLAGEPAELQGAVIADLAAIWLAGHRVAGDRAEGDAMREELLALHTEHVRELALMYLGDVDG*
Ga0065714_100121964	3300005288	Miscanthus Rhizosphere	VSFTERADALLDRIAPVLAGESVELQGAVINDLAAIWIAGHRVEGDRAEGDRFREELLELHARHVRELALMYLGDADG*
Ga0065714_100671712	3300005288	Miscanthus Rhizosphere	VSFYEQVDDLLDRIAPILAGESIEMQGAVIADLAALWIAGHRVAGNRYDGDLLRGGLLRMHAEHVRELVAMYVGDTDG*
Ga0065714_100862712	3300005288	Miscanthus Rhizosphere	VSAAEADDPAAFGARADALLDRIAPLIEGQSAELQGAVIADMTAIWVAGHRVAGNRADGDLLREGLLRMHAEHVRELIAMYVGDADG*
Ga0065712_102424581	3300005290	Miscanthus Rhizosphere	DDPAAFGARADALLDRIAPLIEGQSAELQGAVIADMTAIWVAGHRVAGNRADGDLLREGLLRMHAEHVRELIAMYVGDADG*
Ga0065715_100987658	3300005293	Miscanthus Rhizosphere	VSFTERADALLDRIAPVLAGESVELQGAVINDLAAIWIAGHRVEGDRAEGDRFREELLELHAKHVRELALMYLGDADG*
Ga0070683_10000036036	3300005329	Corn Rhizosphere	VSDDADVAALGEEADALLDHIMPLLAGQSAELQGAVITDLAAIWIAGHRVAGDRAEGDCMRAELLQMHTQHVRELVEMYLEGVDG*
Ga0070683_10000065112	3300005329	Corn Rhizosphere	VSAAEADDPAAFGADADALLDLIKPLLAGQSPELQGAVINDLAAIWIAGHRVPGDRGEGDRTREELLRMHAEHVRELVAMYVGDADG*
Ga0070683_10004126311	3300005329	Corn Rhizosphere	VSDASAAAAGFGEEADALLERIMPFLAGHDPELQGAVVTDLAALWIAGHRVEGSRAEGDRMRGELLEVYLQHVRELVEMYLEGVDG*
Ga0070683_1001560814	3300005329	Corn Rhizosphere	VSFHEQVDRLLDRIAQILAGESLEMQGAVVADLAALWIAGHRVRGDRAEGDRAREELLELHAQHVRELIVMYVGDADG*
Ga0070683_1003024073	3300005329	Corn Rhizosphere	VNFTKEADALLDRISSILAGASTELQGAVVNDLTAIWIAGHRVENDRAEGDRFREELLELHATHVRELVCMYLGGVDG*
Ga0070683_1003634442	3300005329	Corn Rhizosphere	VSFTAQADALLERIAPILAGQPAELQGAVVADLAAIWIAGHRDESRAEGDAMREELLEMHVRHVRELVCMYLGDVDG*
Ga0070683_1006006141	3300005329	Corn Rhizosphere	VSDADPDAVSFGDEADALVDRISPLLAGQSAELQGAVLADLIAIWLAGHRIEGGRVEGDRMREELLALHVAHVRELACLYLGDVDG*
Ga0070683_1008608903	3300005329	Corn Rhizosphere	VTSADEEIAGIGEQADALLDRIKPILAGQPAELQGAVICDLTAIWIAGHRIEGDRAEGDQMRAELLAMHAEHVRELVEMYLEGVDG*
Ga0070690_1017573101	3300005330	Switchgrass Rhizosphere	MSDTDPDAASFAAGADAILDLIAPILADRPAELQGAVLADLAAIWIAGHRVRGTRAEGDRMRAELLELHAEHVRELVCMYLEGTDG*
Ga0070670_1001161621	3300005331	Switchgrass Rhizosphere	VSDASAAAAGFGEEADALLERIMPFLAGHDPELQGAVVTDLAALWIAGHRVEGSRAEGDRMRGELLEVYLQHVRELVEMY
Ga0070670_1017979662	3300005331	Switchgrass Rhizosphere	VSLPDPDADVAGFAAGADALLERIAPILAGQPVELQGAVVSDLAAIWIAGHRVENGRAEGDRMRAELLQMHAEHVRELVDIYLDGVDG*
Ga0068869_1005194932	3300005334	Miscanthus Rhizosphere	VSFTEQVDVLLDRIAPTLAGESIEMQGAVVADLAALWIAGHRVRGDRAEGDRLRESLLEMHTKHVRELVAMYLGDVDG*
Ga0068869_1019601382	3300005334	Miscanthus Rhizosphere	VSAAEADDPAAFGAEADALLDRIKPLLAGQSPELQGAVINDLAAIWIAGHRVPGDRGEGDRTREELLRMHAE
Ga0070666_106714223	3300005335	Switchgrass Rhizosphere	VSDASADAAGFGEEVDALLERIMPFLAGHDPELQGAVVTDLAALWIAGHRVEGSRAEGDRMRGELLEVYLQHVRELVEMYLEGVDG*
Ga0070687_1002104682	3300005343	Switchgrass Rhizosphere	VNFTKEADVLLDRISSIFAGASTELQGAVVNDLTAIWIAGHRVENDRAEGDRMREELLELHAKHVRELVPMYLGDVDG*
Ga0070668_1007890942	3300005347	Switchgrass Rhizosphere	VSFDDRADALLDRIGPILAGAPAELQGAVVNELTALWIARHRVENDRAAGDQVRAELLALHCRHVRELVEMYLGEADG*
Ga0070668_1009563912	3300005347	Switchgrass Rhizosphere	VSLPDPDADVAGFAAGADALLERIAPILAGQPAELQGAVVSDLAAIWIAGHRVENGRAEGDRMRAELLQMHAEHVRELVDIYLDGVDG*
Ga0070675_1003128993	3300005354	Miscanthus Rhizosphere	MSSPDADAVAFAAAADALMDCIAPILAGRSPELQGAVIADMTAIWLAGHRVEGDRAEGDLLRERLLRLHAKHVHELALMYLDGVDG*
Ga0070675_1004615222	3300005354	Miscanthus Rhizosphere	MSFGERADALLDSIGPILANASVELQGAVLADLTAIWLAGHRVVGGRAEGDRFREELIELHGRYVRELALKYLGDADG*
Ga0070675_1007098132	3300005354	Miscanthus Rhizosphere	MSFAERVDALLDRIAPTLAGESIEMQGAVVADLAALWIAGHRVRGDRAEGDRTREELLRMHARHVRELVAMYLDGVDG*
Ga0070675_1010068171	3300005354	Miscanthus Rhizosphere	VSSPKADPARFGEAADALLDRIKPLLAGKPAELQGAVIADLAAIWLAGHRVAGDRAEGDRMREELLALHAEHVRELALMYL
Ga0070671_1015991421	3300005355	Switchgrass Rhizosphere	MTAQDADLVGFAAGAEALLDRIKPLLAGSDAELQGAVICDLAALWIAGHRIAGDRAEGDAMRAELLEMHTRHVRELVAMYLEGVDG*
Ga0070673_1000587042	3300005364	Switchgrass Rhizosphere	VSPEDDARSFGEQADRLLERIAPILAGQLAELQGAVVADLAAIWIAGHRNGSRAEGDAMREELIEMHTRHVRELVCAYLGDIDG*
Ga0070673_1001546263	3300005364	Switchgrass Rhizosphere	VSFTERADALLDRIAPVLAGESVELQGAVINDLAAIWIAGHRVEGDRAEGDRFREELLELHAKHVRELVEMYVGDMDS*
Ga0070673_1001809702	3300005364	Switchgrass Rhizosphere	VSFNERVDALLDRISPILANASGEMQGAVLADLTAIWIAGHRVENDRAEGDRFREELLELHAKHVRELVEMYLGDADG*
Ga0070688_1003034362	3300005365	Switchgrass Rhizosphere	VSAAEADDPAAFGAEADALFDLIKPLLADESAEVQGCVLNELVAIWIGGHRVPGDRGEGDRMRAELLVLHAQHVRELVAMYVGDADG*
Ga0070667_1005536972	3300005367	Switchgrass Rhizosphere	VSAASADAAGFGEEADALLERIMPFLAGHDPELQGAVVTDLAALWIAGHRVEGSRAEGDRMRGELLEVYLQHVRELVEMYLEGVDG*
Ga0070667_1010944343	3300005367	Switchgrass Rhizosphere	MSFGERADALLDSIGPILANASVELQGAVLADLTAIWLAGHRVVGGRAEGDRFREELIELHGRYVRELALMYLGDADG*
Ga0070700_1009774881	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	LLDRIAPILAGESIEMQGAVIADLAALWIAGHRVAGNRYDGDLLRGGLLRMHAEHVRELVAMYVGDADG*
Ga0070700_1011353222	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	VSAAEADDPAAFGAEADGLLDLVKPLLAGQSPELQGAVINDLAAIWIAGHRVPGDRGEGDRMREDLLALHAEHVRELVAMYVGDADG*
Ga0070663_1019939641	3300005455	Corn Rhizosphere	ALLERIMPFLAGHDPELQGAVVTDLAALWIAGHRVEGSRAEGDRMRGELLEVYLQHVRELVEMYLDGVDG*
Ga0070685_104725982	3300005466	Switchgrass Rhizosphere	VTSADEEIAGIGEQADALLDRIKPILAGQSAEVQGAVIADLAAIWIAGHRIEGDRAEGDRMREDLLAMHAEHVRELVEMYLEGVDG*
Ga0070679_1014165111	3300005530	Corn Rhizosphere	VSLPDPDADVAGFAAGADALLERIAPILAGQPVELQGAVVSDLAAIWIAGHRVENGRAEGDRMRAELLQMHA
Ga0070684_1000854362	3300005535	Corn Rhizosphere	VSTESPPSGGRGADTGFGERADALALRIAPILAGSDAELQGAVLADLTAIWIAGHRTPGDRAEGDCMRAELLQMHTQHVRELVEMYLEGVDG*
Ga0070684_1018194611	3300005535	Corn Rhizosphere	GVASTEAAPAHGSASMTAQDADLVGFAAGAEALLDRIKPLLAGSDAELQGAVICDLAALWIAGHRIAGDRAEGDAMRAELLEMHTRHVRELVAMYLEGVDG*
Ga0070665_1024980871	3300005548	Switchgrass Rhizosphere	VSAAEADDPAAFGAEADRLLDLVKPLLAGQSPELQGAVINDLAAIWIAGHRVPGDRGEGDRMREDLLALHAEHVRELVAMY
Ga0070664_1022273921	3300005564	Corn Rhizosphere	VDALLDRIAPILAGQSVEMQGAVVSDLAALWIAGHRVRGDRAEGDRAREELLELHAQHVRELIVMYVGDADG*
Ga0068857_1014576242	3300005577	Corn Rhizosphere	VSDDADVAALGEEADALLDHIMPLLAGQSAELQGAVITDLAAIWIAGHRVAGDRAEGDCMRAELLQMHTQHVRELVEMY
Ga0070702_1000147044	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	MSFTERADALLDRISPILANASVEMQGAVLADLTAIWIAGHRVENDRAEGDHFREELLELHAKHVRELALMYLGDADG*
Ga0068859_1014424482	3300005617	Switchgrass Rhizosphere	MSFAERVDALLDRIAPTLAGESIEMQGAVVADLAALWIAGHRVRGDRAEGDRTREELLRLHAEHVRELVAMYLGDADG*
Ga0068870_112395522	3300005840	Miscanthus Rhizosphere	VRFSEAADAIVERIAPILANRNVELQGAVVADLAAIWLAGHRTTEGRAEGNKMREELLALLAEHVRELVEMYLDGVDG*
Ga0068863_1018119702	3300005841	Switchgrass Rhizosphere	VSFYEQVDALLDRIAPILAGQPLEMQGAVVSDLAALWIAGHRVCGDRAEGDRTREELLELHAEHVRELVAMYVGDADG*
Ga0068858_1009525193	3300005842	Switchgrass Rhizosphere	LGSAPAPRMSFGERADALLDSIGPILANASVELQGAVLADLTAIWLAGHRVVGGRAEGDRFREELIELHGRYVRELALMYLGDADG*
Ga0068858_1022319681	3300005842	Switchgrass Rhizosphere	MTDADDSERLGEQADAIVDRIRPILAGSDAELQGAVICDLAALWIAGHRMPDRAEGDRMRAELLQLHTAHVRELVQMYLKGVDG*
Ga0068860_1007077063	3300005843	Switchgrass Rhizosphere	RVSAAEADDPAAFGAEADALLDRIKPLLAGQSPELQGAVINDLAAIWIAGHRVPGDRGEGDRTREELLRMHAEHVRELVAMYVGDADG*
Ga0097621_1009969661	3300006237	Miscanthus Rhizosphere	VSFTSEADALLERIVPLLTGYSSELQGAVVADLAAIWIAGHRAGNRAEGDLFRDELLAQFTKHVAELVALYLEGI
Ga0097621_1014221652	3300006237	Miscanthus Rhizosphere	VSSSEADPVGFGEAADALLDRIAPILAGQPAELQGAVIADLAAIWLAGHRIEGDRAEGDQMREDLLEMHSRHVRELALMYLGDADG*
Ga0068871_1011807071	3300006358	Miscanthus Rhizosphere	GEEVDALLERIMPFLAGHDPELQGAVVTDLAALWIAGHRVEGSRAEGDRMRGELLEVYLQHVRELVEMYLEGVDG*
Ga0068865_1001952792	3300006881	Miscanthus Rhizosphere	VSFDERADALLDRIGPILAGAPAELQGAVVNELTALWIARHRVENDRAAGDQVRAELLALHCRHVRELVEMHLGEADG*
Ga0068865_1013262992	3300006881	Miscanthus Rhizosphere	MTAQDADLVGFAAGAEALLDRIKPLLAGSDAELQGAVICDLAATWIAGHRMPDRAEGDRMREELLTLHTAHVRELVQMYLEGVDG*
Ga0105251_101358233	3300009011	Switchgrass Rhizosphere	VSDASAAAAGFGEEADALLERIMPFLAGHDPELQGAVVTDLAALWIAGHRVEGSRAEGDRMRGELLEVYLQHVRELVEMYLDGVDG*
Ga0111539_109601182	3300009094	Populus Rhizosphere	VSAIDFDAVSFAAATDALLDRIAPILQGQPAELQGAVLADMTALWLAGHRVENDRTEGDRLRERLLALHSQHVRELAEMYLEGVDG*
Ga0105242_107962962	3300009176	Miscanthus Rhizosphere	VNFTKEADVLLDRISSIFAGASTELQGAVVNDLTAIWIAGHRVERDRAEGDRFREELLELHAKHVRELALMYLGDADG*
Ga0105248_123628402	3300009177	Switchgrass Rhizosphere	VSAAEADDPAAFGAEADRLLDLVKPLLAGQSPELQGAVINDLAAIWIAGHRVPGDRGEGDRMREDLLALHAEHVRELVAMYVGDADG*
Ga0105237_116831571	3300009545	Corn Rhizosphere	VSDASADAAGFGEEVDALLERIMPFLAGHDPELQGAVVTDLAALWIAGHRVEGSRAEGDRMRGELLEVY
Ga0105238_129748552	3300009551	Corn Rhizosphere	EAAGRPRRVTFSDEADRLLDRIAPLLAGQSSELQGAVVADLTAIWVAGHRMPDRAEGDRIREELLQMHARHVRELVCMYLEGVDG*
Ga0105249_106818523	3300009553	Switchgrass Rhizosphere	VSLPDPDADVAGFAAGADALLERIAPILAGQPAELQGAVVSDLAAIWIAGHRVENGRAEGDRMRAELLQMH
Ga0105249_117022891	3300009553	Switchgrass Rhizosphere	GADALLERIMPFLAGHDPELQGAVVTDLAALWIAGHRVEGSRAEGDRMRGELLEVYLQHVRELVEMYLEGVDG*
Ga0105249_135817922	3300009553	Switchgrass Rhizosphere	MSFHEQLDALLDRIAPILAGQSIEMQGAVIADLAALWIAGHRVAGNRADGDLLREELLRMHAEHVRELVAMYVGDADG*
Ga0134121_123757793	3300010401	Terrestrial Soil	ADALLERIMPFLAGHDPELQGAVVTDLAALWIAGHRVEGSRAEGDRMRGELLEVYLQHVRELVEMYLDGVDG*
Ga0134123_102438072	3300010403	Terrestrial Soil	VSDTDTDAAGFAAAADALLDRIMPFLAGQSAELQGAVIADLVAIWLAGHRVSGDRAEGDRTREELLAQHAQHIGELVALYLDGVDG*
Ga0134123_111023152	3300010403	Terrestrial Soil	VNFTKEADVLLDRISSIFAGASTELQGAVVNDLTAIWIAGHRVERDRAEGDRFREELLELHATHVRELVCMYLGGVDG*
Ga0105246_100374614	3300011119	Miscanthus Rhizosphere	VSDASADAAGFGEEADALLERIMPFLAGHDPELQGAVVTDLAALWIAGHRVEGSRAEGDRMRGELLEVYLQHVRELVEMYLDGVDG*
Ga0105246_109493112	3300011119	Miscanthus Rhizosphere	VSLPDPDADVAGFAAGADALLERIAPILAGQPVELQGAVVSDLAAIWIAGHRVENGRAEGDRMR
Ga0157293_101011711	3300012898	Soil	VSAASADAAGFGEEVDALLERIMPFLAGHDPELQGAVVTDLAALWIAGHRVEGSRAEGDRMRGELLEVYLQHVRELVEMYLDGVDG*
Ga0157289_103083182	3300012903	Soil	VSAASADAAGFGEEADALLERIMPFLAGHDPELQGAVVTDLAALWIAGHRVEGSRAEGDRMRGELLEVYLQHVRELVEMYLDGVDG*
Ga0157308_100979321	3300012910	Soil	RIMPFLAGHDPELQGAVVTDLAALWIAGHRVEGSRAEGDRMRGELLEVYLQHVRELVEMYLDGVDG*
Ga0157378_110390292	3300013297	Miscanthus Rhizosphere	VNFTKEADVLLDRISSIFACASTELQGAVVNDLTAIWIAGHRVENDRAEGDRVREELLELHATHVRELVCMYLGGVDG*
Ga0157377_106694132	3300014745	Miscanthus Rhizosphere	VRFGAAADDLLDRLAPILEGQPAELQGAVIADMTALWLAGHRVQGDRAEGDRVREKLLQLHATHVRELVEMYLEGVDG*
Ga0157376_116577812	3300014969	Miscanthus Rhizosphere	MSFTERADALLDRISPILANASVELQGAVLADLTAIWIAGHRFGPSSLGPENDRAEGDRFREELLELHAKHVRELVEMYLGDADG*
Ga0157376_123201783	3300014969	Miscanthus Rhizosphere	VSLGTEADALIFRISQLLAGESAELQGSVVCDLAAMWIAGHRAEGGRAEGDRLREELLEMHTQHVRELVELYLDGVDG*
Ga0173483_102929912	3300015077	Soil	VDRIAPILAGSDAELQGAVLADLTAIWIAGHRTPGDRADGDCMRESLMHMHVRHVRELVAMYLGDVDG*
Ga0132258_135580272	3300015371	Arabidopsis Rhizosphere	MSFTERADALLDRISPILANASVEMQGAVLADLTAIWIAGHRIENDRVEGDRMRAELLELHARHVRELALMYLGDVDG*
Ga0132257_1021916232	3300015373	Arabidopsis Rhizosphere	VSFTERADALLDRIAPVLAGESVELQGAVINDLAAIWIAGHRVEGDRAEGDRFREELLELHARHVRELALMYLGDVDG*
Ga0132257_1044446342	3300015373	Arabidopsis Rhizosphere	MSFTERADALLDRISPILASASVEMQGAVLADLTAIWIAGRRVGPSSLGPENDRAEGDRFREELLELHARHVRELVEMYLGDADG*
Ga0132255_1031067842	3300015374	Arabidopsis Rhizosphere	VSFNERVDALLDRISPILANASGEMQGAVLADLTAIWIAGHRVENDRAEGDRFREELLELHAKYVRELVLMYLGDADG*
Ga0173482_104328212	3300019361	Soil	VSAASADAAGFGEEADALLERIMPFLAGHDPELQGAVVTDLAALWIAGHRVEGSRAEGDRMRGELLEVYLQHVRELVEMYLDGVDG
Ga0247794_102573521	3300024055	Soil	GADALLERIAPILAGQPAELQGAVVSDLAAIWIAGHRVENGRAEGDRMRAELLQMHAEHVRELVEIYLDGVDG
Ga0207697_100868953	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	MTAQDADLVGFAAGAEALLDRIKPLLAGSDAELQGAVICDLAALWIAGHRIAGDRAEGDAMRAELLEMHTRHVRELVAMY
Ga0207688_110742551	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MTAQDADLVGFAAGAEALLDRIKPLLAGSDAELQGAVICDLAALWIAGHRIAGDRAEGDAMRAELLEMHTRHVRELV
Ga0207680_105141542	3300025903	Switchgrass Rhizosphere	MSFGERADALLDSIGPILANASVELQGAVLADLTAIWLAGHRVVGGRAEGDRFREELIELHGRYVRELALMYLGDADG
Ga0207680_106742024	3300025903	Switchgrass Rhizosphere	RVSDASADAAGFGEEVDALLERIMPFLAGHDPELQGAVVTDLAALWIAGHRVEGSRAEGDRMRGELLEVYLQHVRELVEMYLEGVDG
Ga0207643_108527112	3300025908	Miscanthus Rhizosphere	VRFSEAADAIVERIAPILANRNVELQGAVVADLAAIWLAGHRTTEGRAEGNKMREELLALLAEHVRELVEMYLDGVDG
Ga0207662_102563842	3300025918	Switchgrass Rhizosphere	VSFTERADALLDRIAPVLAGESVELQGAVINDLAAIWIAGHRVEGDRAEGDRFREELLELHARHVRELALMYLGDADG
Ga0207662_104954862	3300025918	Switchgrass Rhizosphere	VSDASADAAGFGEEVDALLERIMPFLAGHDPELQGAVVTDLAALWIAGHRVEGSRAEGDRMRGELLEVYLQHVRELVEMYLEGVDG
Ga0207650_104827342	3300025925	Switchgrass Rhizosphere	VSDASAAAAGFGEEADALLERIMPFLAGHDPELQGAVVTDLAALWIAGHRVEGSRAEGDRMRGELLEVYLQHVRELVEMYLDGVDG
Ga0207659_101725613	3300025926	Miscanthus Rhizosphere	MSFAERVDALLDRIAPTLAGESIEMQGAVVADLAALWIAGHRVRGDRAEGDRTREELLRMHARHVRELVAMYLDGVDG
Ga0207659_102544122	3300025926	Miscanthus Rhizosphere	MSSPDADAVAFAAAADALMDCIAPILAGRSPELQGAVIADMTAIWLAGHRVEGDRAEGDLLRERLLRLHAKHVHELALMYLDGVDG
Ga0207701_100095652	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	VSFDDRADALLDRIGPILAGAPAELQGAVVNELTALWIARHRVENDRAAGDQVRAELLALHCRHVRELVEMHLGEADG
Ga0207701_100264913	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	VSDASADAAGFGEEADALLERIMPFLAGHDPELQGAVVTDLAALWIAGHRVEGSRAEGDRMRGELLEVYLQHVRELVEMYLEGVDG
Ga0207701_100320342	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	VSPEDDARSFGEQADRLLERIAPILAGQLAELQGAVVADLAAIWIAGHRNGSRAEGDAMREELIEMHTRHVRELVCAYLGDIDG
Ga0207701_100380012	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	VSAAEADDPAAFGAEADALFDLIAPLLAGQSAELQGAVINDLAAIWIAGHRVRGDRAEGDRTRAELLALHAQHVRELVAMIVGDADG
Ga0207701_108726753	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	VSLPDPDADVAGFAAGADALLERIAPILAGQPAELQGAVVSDLAAIWIAGHRVENGRAEGDRMRAELLQMHAEHVRELVDIYLDGVDG
Ga0207686_100696102	3300025934	Miscanthus Rhizosphere	VSFDERADALLDRIGPILAGAPAELQGAVVNELTALWIARHRVENDRAAGDQVRAELLALHCRHVRELVEMHLGEADG
Ga0207686_106269872	3300025934	Miscanthus Rhizosphere	VTDLDADEAVFTAQADALLDRISSIFAGASTELQGAVVNDLTAIWIAGHRVERDRAEGDRFREELLELHATHVRELVCMYLGGVDG
Ga0207670_106158513	3300025936	Switchgrass Rhizosphere	VSAAEADDPAAFGAEADALLDRIKPLLAGQSPELQGAVINDLAAIWIAGHRVPGDRGEGDRTREELLRMHAEHVRELVAMYLGDVDG
Ga0207670_110536062	3300025936	Switchgrass Rhizosphere	VNFTKEADALLDRISSILAGASTELQGAVVNDLTAIWIAGHRVENDRAEGDRFREELLELHATHVRELVCMYLGGVDG
Ga0207669_106247472	3300025937	Miscanthus Rhizosphere	MTAQDADLVGFAAGAEALLDRIKPLLAGSDAELQGAVICDLAALWIAGHRIAGDRAEGDAMRAELLEMHTRHVRELVAMYLEGVDG
Ga0207704_117295751	3300025938	Miscanthus Rhizosphere	VSDASADAAGFGEEVDALLERIMPFLAGHDPELQGAVVTDLAALWIAGHRVEGSRAEGDRMRGELLEVYLQHVRELVEMYLDGVDG
Ga0207691_102015641	3300025940	Miscanthus Rhizosphere	VSFTERADALLDRIAPVLAGESVELQGAVINDLAAIWIAGHRVEGDRAEGDRFREELLELHAKHVRELVEMYVGDMDS
Ga0207711_111002701	3300025941	Switchgrass Rhizosphere	VSDASADAAGFGEEVDALLERIMPFLAGHDPELQGAVVTDLAALWIAGHRVEGSRAEGDRMRGELL
Ga0207711_115557122	3300025941	Switchgrass Rhizosphere	VSAAEADDPAAFGAEADGLLDLVKPLLAGQSPELQGAVINDLAAIWIAGHRVPGDRGEGDRMREDLLALHAEHVRELVAMYVGDADG
Ga0207689_117590472	3300025942	Miscanthus Rhizosphere	VSLPDPDADVAGFAAGADALLERIAPILAGQPAELQGAVVSDLAAIWIAGHRVENGRAEGDRMRAELLQMHAEHVRELVDIYLDG
Ga0207661_1000016241	3300025944	Corn Rhizosphere	VSDDADVAALGEEADALLDHIMPLLAGQSAELQGAVITDLAAIWIAGHRVAGDRAEGDCMRAELLQMHTQHVRELVEMYLEGVDG
Ga0207661_100059244	3300025944	Corn Rhizosphere	VSAAEADDPAAFGADADALLDLIKPLLAGQSPELQGAVINDLAAIWIAGHRVPGDRGEGDRTREELLRMHAEHVRELVAMYVGDADG
Ga0207661_101048632	3300025944	Corn Rhizosphere	VSFHEQVDRLLDRIAQILAGESLEMQGAVVADLAALWIAGHRVRGDRAEGDRAREELLELHAQHVRELIVMYVGDADG
Ga0207661_101171892	3300025944	Corn Rhizosphere	VSFTAQADALLERIAPILAGQPAELQGAVVADLAAIWIAGHRDESRAEGDAMREELLEMHVRHVRELVCMYLGDVDG
Ga0207661_104066503	3300025944	Corn Rhizosphere	VSAAEADDPAAFGARADALLDRIAPLIEGQSAELQGAVIADMTAIWVAGHRVAGNRADGDLLREGLLRMHAEHVRELIA
Ga0207661_107065552	3300025944	Corn Rhizosphere	VTSADEEIAGIGEQADALLDRIKPILAGQPAELQGAVICDLTAIWIAGHRIEGDRAEGDQMRAELLAMHAEHVRELVEMYLEGVDG
Ga0207661_115754212	3300025944	Corn Rhizosphere	VSDADPDAVSFGDEADALVDRISPLLAGQSAELQGAVLADLIAIWLAGHRIEGGRVEGDRMREELLALHVAHVRELACLYLGDVDG
Ga0207651_100563732	3300025960	Switchgrass Rhizosphere	VSFNERVDALLDRISPILANASGEMQGAVLADLTAIWIAGHRVENDRAEGDRFREELLELHAKHVRELVEMYLGDADG
Ga0207677_113871611	3300026023	Miscanthus Rhizosphere	RLRPAAPASVQAQLGPGVSFTAQADALLERIAPILAGQPAELQGAVVADLAAIWIAGHRDESRAEGDAMREELLEMHVRHVRELVCMYLGDVDG
Ga0207703_102584732	3300026035	Switchgrass Rhizosphere	VSAAEADDPAAFGAEADALFDLIKPLLADESAEVQGCVLNELVAIWIGGHRVPGDRGEGDRMRAELLVLHAQHVRELVAMYVGDADG
Ga0207703_113458971	3300026035	Switchgrass Rhizosphere	GNGALGSAPAPRMSFGERADALLDSIGPILANASVELQGAVLADLTAIWLAGHRVVGGRAEGDRFREELIELHGRYVRELALMYLGDADG
Ga0207708_107980052	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	VGFGEAADTILDRIAPILAGKPAELQGAVIADLAAIWLAGHRVAGDRAEGDRMREELLALHAEHVRELALMYLGDVDG
Ga0207676_1000517112	3300026095	Switchgrass Rhizosphere	VSDASAAAAGFGEEADALLERIMPFLAGHDPELQGAVVTDLAALWIAGHRVEGSRAEGDRMRGELLEVYLQHVRELVEMYLEGVDG
Ga0207683_108009042	3300026121	Miscanthus Rhizosphere	VSDASADAAGFGEEADALLERIMPFLAGHDPELQGAVVTDLAALWIAGHRVEGSRAEGDRMRGELLEVYLQHVR
Ga0268266_101477992	3300028379	Switchgrass Rhizosphere	VSSPKADPARFGEAADAILDRIKPILACSVELQGAVIADLAAIWIAGHRAEDRAEGDLFREELIELLAEHVRALVLMYLGDADG
Ga0268266_102309913	3300028379	Switchgrass Rhizosphere	DDPAAFGARADALLDRIAPLIEGQSAELQGAVIADMTAIWVAGHRVAGNRADGDLLREGLLRMHAEHVRELIAMYVGDADG
Ga0268266_109565792	3300028379	Switchgrass Rhizosphere	VSAAEADDPAAFGAEADRLLDLVKPLLAGQSPELQGAVINDLAAIWIAGHRVPGDRGEGDRMRAELLVLHAQHVRELVAMYVGDADG
Ga0268264_111770642	3300028381	Switchgrass Rhizosphere	HGRIPAPAPPRVSAAEADDPAAFGAEADALLDRIKPLLAGQSPELQGAVINDLAAIWIAGHRVPGDRGEGDRTREELLRMHAEHVRELVAMYVGDADG
Ga0310887_108832063	3300031547	Soil	VSIPGGADAAPFGVQADALLDRIAPILANQPAELQGAVLADLTVIWLAGHRVPGDRAEGDRLRAELLAMHARHIGELMALYLD
Ga0310884_110732182	3300031944	Soil	SEADALVDRIAPILAGSDAELQGAVLADLTAIWIAGHRTPGDRADGDCMREELIELHSKHVRELVCMYLGDADG
Ga0310890_102375963	3300032075	Soil	ADALALRIAPILAGSDAELQGAVLADLTAIWIAGHRTPGDRADGDCMREELIELHSKHVRELVCMYLGDADG
Ga0310895_100219421	3300032122	Soil	AGHGRIPAPAPPRVSDADPDAVSFGDEADALVDRISPLLAGQSAELQGAVLADLIAIWLAGHRIEGGRVEGDRMREELLALHVAHVRELACLYLGDVDG
Ga0310810_107389572	3300033412	Soil	VSAASADAAGFGEEADALLERIMPFLAGHDPELQGAVVTDLAALWIAGHRVEGSRAEGDRMRGELLEVYLQHVRELVEMYLEGVDG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F054118

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences