Metagenome / Metatranscriptome Family F054116

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F054116
Family Type	Metagenome / Metatranscriptome
Number of Sequences	140
Average Sequence Length	47 residues
Representative Sequence	CLVLDELLRELGVVFNPQTLHNPNATPSGTKEFDLSARWTWGHDRVM
Number of Associated Samples	113
Number of Associated Scaffolds	140

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	99.29 %
% of genes from short scaffolds (< 2000 bps)	96.43 %
Associated GOLD sequencing projects	107
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.33

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (92.143 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (12.143 % of family members)
Environment Ontology (ENVO)	Unclassified (24.286 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (60.714 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 18.67% β-sheet: 0.00% Coil/Unstructured: 81.33%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.33
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.33
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 140 Family Scaffolds
PF00571	CBS	10.71
PF01268	FTHFS	4.29
PF13400	Tad	3.57
PF03328	HpcH_HpaI	2.86
PF01261	AP_endonuc_2	2.86
PF09861	Lar_N	2.14
PF00753	Lactamase_B	2.14
PF01855	POR_N	2.14
PF07638	Sigma70_ECF	1.43
PF13620	CarboxypepD_reg	1.43
PF01527	HTH_Tnp_1	0.71
PF01545	Cation_efflux	0.71
PF00069	Pkinase	0.71
PF02518	HATPase_c	0.71
PF06723	MreB_Mbl	0.71
PF13520	AA_permease_2	0.71
PF00285	Citrate_synt	0.71
PF12543	DUF3738	0.71
PF13414	TPR_11	0.71
PF04989	CmcI	0.71
PF07969	Amidohydro_3	0.71
PF02954	HTH_8	0.71
PF08388	GIIM	0.71
PF13360	PQQ_2	0.71
PF01837	HcyBio	0.71
PF08532	Glyco_hydro_42M	0.71
PF01734	Patatin	0.71
PF01384	PHO4	0.71
PF14690	zf-ISL3	0.71

COG ID	Name	Functional Category	% Frequency in 140 Family Scaffolds
COG2759	Formyltetrahydrofolate synthetase	Nucleotide transport and metabolism [F]	4.29
COG0469	Pyruvate kinase	Carbohydrate transport and metabolism [G]	2.86
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	2.86
COG3836	2-keto-3-deoxy-L-rhamnonate aldolase RhmA	Carbohydrate transport and metabolism [G]	2.86
COG2301	Citrate lyase beta subunit	Carbohydrate transport and metabolism [G]	2.86
COG4231	TPP-dependent indolepyruvate ferredoxin oxidoreductase, alpha subunit	Energy production and conversion [C]	2.14
COG0674	Pyruvate:ferredoxin oxidoreductase or related 2-oxoacid:ferredoxin oxidoreductase, alpha subunit	Energy production and conversion [C]	2.14
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	1.43
COG1874	Beta-galactosidase GanA	Carbohydrate transport and metabolism [G]	0.71
COG4667	Predicted phospholipase, patatin/cPLA2 family	Lipid transport and metabolism [I]	0.71
COG3965	Predicted Co/Zn/Cd cation transporter, cation efflux family	Inorganic ion transport and metabolism [P]	0.71
COG3621	Patatin-like phospholipase/acyl hydrolase, includes sporulation protein CotR	General function prediction only [R]	0.71
COG3510	Cephalosporin hydroxylase	Defense mechanisms [V]	0.71
COG1900	Sulfur incorporation enzyme MA1821 (anaerobic homocysteine biosynthesis), HcyBio/DUF39 family	Amino acid transport and metabolism [E]	0.71
COG0053	Divalent metal cation (Fe/Co/Zn/Cd) efflux pump	Inorganic ion transport and metabolism [P]	0.71
COG1752	Predicted acylesterase/phospholipase RssA, containd patatin domain	General function prediction only [R]	0.71
COG1230	Co/Zn/Cd efflux system component	Inorganic ion transport and metabolism [P]	0.71
COG1077	Cell shape-determining ATPase MreB, actin-like superfamily	Cell cycle control, cell division, chromosome partitioning [D]	0.71
COG0372	Citrate synthase	Energy production and conversion [C]	0.71
COG0306	Phosphate/sulfate permease	Inorganic ion transport and metabolism [P]	0.71

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	92.14 %
Unclassified	root	N/A	7.86 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	92.14 %
Unclassified	root	N/A	7.86 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	92.14 %
Unclassified	root	N/A	7.86 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	65.00 %
Unclassified	root	N/A	7.86 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	2.86 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	2.86 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.14 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	20.71 %
Unclassified	root	N/A	7.86 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	2.86 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2.86 %
Candidatus Marinimicrobia	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia	2.86 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.43 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	0.71 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.71 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	20.00 %
Unclassified	root	N/A	7.86 %
Candidatus Marinimicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	2.86 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	2.86 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	1.43 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.43 %
unclassified Blastocatellia	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia	0.71 %
Acidobacteria bacterium 37-65-4	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 37-65-4	0.71 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.71 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.71 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	20.00 %
Unclassified	root	N/A	7.86 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2.86 %
Candidatus Marinimicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	2.86 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.43 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	0.71 %
unclassified Bryobacterales	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales	0.71 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	0.71 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.71 %
Acidobacteria bacterium 37-65-4	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 37-65-4	0.71 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.71 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	20.00 %
Unclassified	root	N/A	7.86 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2.86 %
Candidatus Marinimicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	2.86 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.43 %
Candidatus Sulfopaludibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter	0.71 %
Bryobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	0.71 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	0.71 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.71 %
Acidobacteria bacterium 37-65-4	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 37-65-4	0.71 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.71 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	20.00 %
Unclassified	root	N/A	7.86 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2.86 %
Candidatus Marinimicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	2.86 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.43 %
unclassified Candidatus Sulfopaludibacter	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter	0.71 %
Bryobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	0.71 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	0.71 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.71 %
Acidobacteria bacterium 37-65-4	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 37-65-4	0.71 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.71 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	20.00 %
Unclassified	root	N/A	7.86 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2.86 %
Candidatus Marinimicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	2.86 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.43 %
Candidatus Sulfopaludibacter sp. SbA3	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA3	0.71 %
Bryobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	0.71 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	0.71 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.71 %
Acidobacteria bacterium 37-65-4	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 37-65-4	0.71 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.71 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459014\|G1P06HT02FHKSG	All Organisms → cellular organisms → Bacteria → Acidobacteria	569	Open in IMG/M
3300000567\|JGI12270J11330_10289796	All Organisms → cellular organisms → Bacteria → Acidobacteria	512	Open in IMG/M
3300000789\|JGI1027J11758_10887601	All Organisms → cellular organisms → Bacteria	605	Open in IMG/M
3300000891\|JGI10214J12806_12256917	All Organisms → cellular organisms → Bacteria → Acidobacteria	866	Open in IMG/M
3300000955\|JGI1027J12803_103253491	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	516	Open in IMG/M
3300000956\|JGI10216J12902_106143097	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	547	Open in IMG/M
3300002561\|JGI25384J37096_10169743	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	669	Open in IMG/M
3300004013\|Ga0055465_10328248	All Organisms → cellular organisms → Bacteria	531	Open in IMG/M
3300005177\|Ga0066690_10994796	All Organisms → cellular organisms → Bacteria → Acidobacteria	528	Open in IMG/M
3300005332\|Ga0066388_102567359	All Organisms → cellular organisms → Bacteria → Acidobacteria	927	Open in IMG/M
3300005353\|Ga0070669_100654773	All Organisms → cellular organisms → Bacteria	884	Open in IMG/M
3300005450\|Ga0066682_10135863	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1560	Open in IMG/M
3300005450\|Ga0066682_10221357	All Organisms → cellular organisms → Bacteria → Acidobacteria	1215	Open in IMG/M
3300005457\|Ga0070662_101800923	Not Available	529	Open in IMG/M
3300005466\|Ga0070685_10226914	All Organisms → cellular organisms → Bacteria → Acidobacteria	1226	Open in IMG/M
3300005526\|Ga0073909_10700438	Not Available	508	Open in IMG/M
3300005532\|Ga0070739_10175219	All Organisms → cellular organisms → Bacteria	1115	Open in IMG/M
3300005534\|Ga0070735_10549882	All Organisms → cellular organisms → Bacteria → Acidobacteria	686	Open in IMG/M
3300005540\|Ga0066697_10100941	All Organisms → cellular organisms → Bacteria → Acidobacteria	1681	Open in IMG/M
3300005558\|Ga0066698_10138993	All Organisms → cellular organisms → Bacteria → Acidobacteria	1633	Open in IMG/M
3300005558\|Ga0066698_10391610	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	956	Open in IMG/M
3300005598\|Ga0066706_10669485	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	824	Open in IMG/M
3300005713\|Ga0066905_100875631	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	784	Open in IMG/M
3300005718\|Ga0068866_11441861	Not Available	504	Open in IMG/M
3300005764\|Ga0066903_101806293	All Organisms → cellular organisms → Bacteria → Acidobacteria	1168	Open in IMG/M
3300005764\|Ga0066903_108591133	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	520	Open in IMG/M
3300006162\|Ga0075030_100123480	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2104	Open in IMG/M
3300006162\|Ga0075030_100637428	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	844	Open in IMG/M
3300006237\|Ga0097621_101158105	All Organisms → cellular organisms → Bacteria → Acidobacteria	727	Open in IMG/M
3300006794\|Ga0066658_10755941	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	543	Open in IMG/M
3300006796\|Ga0066665_10551032	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	937	Open in IMG/M
3300006796\|Ga0066665_11587299	All Organisms → cellular organisms → Bacteria → Acidobacteria	514	Open in IMG/M
3300006844\|Ga0075428_100472947	All Organisms → cellular organisms → Bacteria → Acidobacteria	1341	Open in IMG/M
3300006852\|Ga0075433_10406947	All Organisms → cellular organisms → Bacteria → Acidobacteria	1200	Open in IMG/M
3300006903\|Ga0075426_10453906	All Organisms → cellular organisms → Bacteria → Acidobacteria	949	Open in IMG/M
3300007004\|Ga0079218_10500740	All Organisms → cellular organisms → Bacteria	1074	Open in IMG/M
3300007004\|Ga0079218_11964269	All Organisms → cellular organisms → Bacteria	666	Open in IMG/M
3300007265\|Ga0099794_10392859	All Organisms → cellular organisms → Bacteria → Acidobacteria	724	Open in IMG/M
3300009012\|Ga0066710_102021799	All Organisms → cellular organisms → Bacteria → Acidobacteria	853	Open in IMG/M
3300009012\|Ga0066710_102861346	All Organisms → cellular organisms → Bacteria → Acidobacteria	679	Open in IMG/M
3300009012\|Ga0066710_104760264	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	507	Open in IMG/M
3300009098\|Ga0105245_11877953	Not Available	652	Open in IMG/M
3300009137\|Ga0066709_100034036	All Organisms → cellular organisms → Bacteria → Acidobacteria	5470	Open in IMG/M
3300009147\|Ga0114129_11788214	All Organisms → cellular organisms → Bacteria → Acidobacteria	748	Open in IMG/M
3300009147\|Ga0114129_11982113	All Organisms → cellular organisms → Bacteria	704	Open in IMG/M
3300009162\|Ga0075423_11739831	All Organisms → cellular organisms → Bacteria → Acidobacteria	672	Open in IMG/M
3300009162\|Ga0075423_11983775	All Organisms → cellular organisms → Bacteria → Acidobacteria	630	Open in IMG/M
3300009553\|Ga0105249_11507180	All Organisms → cellular organisms → Bacteria	745	Open in IMG/M
3300009609\|Ga0105347_1212698	All Organisms → cellular organisms → Bacteria → Acidobacteria	782	Open in IMG/M
3300009662\|Ga0105856_1078273	All Organisms → cellular organisms → Bacteria → Acidobacteria	945	Open in IMG/M
3300010043\|Ga0126380_12191322	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	511	Open in IMG/M
3300010119\|Ga0127452_1106608	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	645	Open in IMG/M
3300010141\|Ga0127499_1187403	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	821	Open in IMG/M
3300010304\|Ga0134088_10034865	All Organisms → cellular organisms → Bacteria → Acidobacteria	2280	Open in IMG/M
3300010304\|Ga0134088_10338228	All Organisms → cellular organisms → Bacteria → Acidobacteria	730	Open in IMG/M
3300010358\|Ga0126370_11101268	All Organisms → cellular organisms → Bacteria	732	Open in IMG/M
3300010358\|Ga0126370_11769035	All Organisms → cellular organisms → Bacteria → Acidobacteria	597	Open in IMG/M
3300010358\|Ga0126370_12601363	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	506	Open in IMG/M
3300010362\|Ga0126377_11506728	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	746	Open in IMG/M
3300010362\|Ga0126377_13266182	All Organisms → cellular organisms → Bacteria → Acidobacteria	524	Open in IMG/M
3300010398\|Ga0126383_12830318	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	567	Open in IMG/M
3300010399\|Ga0134127_12178542	All Organisms → cellular organisms → Bacteria	633	Open in IMG/M
3300010401\|Ga0134121_12107016	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	599	Open in IMG/M
3300010401\|Ga0134121_12520952	All Organisms → cellular organisms → Bacteria → Acidobacteria	557	Open in IMG/M
3300010905\|Ga0138112_1058446	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1057	Open in IMG/M
3300011120\|Ga0150983_12983299	All Organisms → cellular organisms → Bacteria	1152	Open in IMG/M
3300011120\|Ga0150983_14390917	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	520	Open in IMG/M
3300011120\|Ga0150983_14817991	All Organisms → cellular organisms → Bacteria	1149	Open in IMG/M
3300011120\|Ga0150983_15035623	All Organisms → cellular organisms → Bacteria	1059	Open in IMG/M
3300012172\|Ga0137320_1126127	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	544	Open in IMG/M
3300012211\|Ga0137377_10317800	All Organisms → cellular organisms → Bacteria	1492	Open in IMG/M
3300012211\|Ga0137377_10911521	All Organisms → cellular organisms → Bacteria → Acidobacteria	810	Open in IMG/M
3300012401\|Ga0134055_1154427	All Organisms → cellular organisms → Bacteria → Acidobacteria	1319	Open in IMG/M
3300012403\|Ga0134049_1087545	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	754	Open in IMG/M
3300012403\|Ga0134049_1254073	All Organisms → cellular organisms → Bacteria → Acidobacteria	768	Open in IMG/M
3300012509\|Ga0157334_1074819	All Organisms → cellular organisms → Bacteria → Acidobacteria	517	Open in IMG/M
3300012899\|Ga0157299_10099057	All Organisms → cellular organisms → Bacteria	751	Open in IMG/M
3300012906\|Ga0157295_10008378	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1757	Open in IMG/M
3300012914\|Ga0157297_10310909	Not Available	597	Open in IMG/M
3300012923\|Ga0137359_11100803	All Organisms → cellular organisms → Bacteria → Acidobacteria	680	Open in IMG/M
3300012929\|Ga0137404_12188901	All Organisms → cellular organisms → Bacteria → Acidobacteria	517	Open in IMG/M
3300012930\|Ga0137407_12109576	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	538	Open in IMG/M
3300012972\|Ga0134077_10336596	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	641	Open in IMG/M
3300012989\|Ga0164305_11571915	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	586	Open in IMG/M
3300013296\|Ga0157374_10979094	Not Available	865	Open in IMG/M
3300014154\|Ga0134075_10171112	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	931	Open in IMG/M
3300014200\|Ga0181526_10292725	All Organisms → cellular organisms → Bacteria → Acidobacteria	1037	Open in IMG/M
3300014325\|Ga0163163_10960824	All Organisms → cellular organisms → Bacteria → Acidobacteria	918	Open in IMG/M
3300014325\|Ga0163163_11056905	All Organisms → cellular organisms → Bacteria → Acidobacteria	875	Open in IMG/M
3300014326\|Ga0157380_12786054	All Organisms → cellular organisms → Bacteria	555	Open in IMG/M
3300014745\|Ga0157377_10517488	All Organisms → cellular organisms → Bacteria → Acidobacteria	837	Open in IMG/M
3300015358\|Ga0134089_10008302	All Organisms → cellular organisms → Bacteria → Acidobacteria	3274	Open in IMG/M
3300015371\|Ga0132258_13859005	All Organisms → cellular organisms → Bacteria → Acidobacteria	1020	Open in IMG/M
3300015372\|Ga0132256_101641833	All Organisms → cellular organisms → Bacteria → Acidobacteria	752	Open in IMG/M
3300015374\|Ga0132255_104660711	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	581	Open in IMG/M
3300015374\|Ga0132255_104847483	All Organisms → cellular organisms → Bacteria	570	Open in IMG/M
3300016270\|Ga0182036_10876298	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	735	Open in IMG/M
3300016294\|Ga0182041_12005160	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	539	Open in IMG/M
3300016357\|Ga0182032_10645247	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	884	Open in IMG/M
3300017656\|Ga0134112_10069231	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1299	Open in IMG/M
3300017656\|Ga0134112_10457925	All Organisms → cellular organisms → Bacteria → Acidobacteria	535	Open in IMG/M
3300017966\|Ga0187776_11387294	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	535	Open in IMG/M
3300018468\|Ga0066662_12329718	All Organisms → cellular organisms → Bacteria → Acidobacteria	563	Open in IMG/M
3300018482\|Ga0066669_10965346	All Organisms → cellular organisms → Bacteria → Acidobacteria	767	Open in IMG/M
3300019458\|Ga0187892_10149487	All Organisms → cellular organisms → Bacteria → Acidobacteria	1310	Open in IMG/M
3300019487\|Ga0187893_10609080	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	691	Open in IMG/M
3300019487\|Ga0187893_10820304	All Organisms → cellular organisms → Bacteria → Acidobacteria	563	Open in IMG/M
3300019789\|Ga0137408_1069423	Not Available	955	Open in IMG/M
3300020004\|Ga0193755_1170240	All Organisms → cellular organisms → Bacteria → Acidobacteria	646	Open in IMG/M
3300021171\|Ga0210405_10321022	All Organisms → cellular organisms → Bacteria	1223	Open in IMG/M
3300021178\|Ga0210408_10261768	All Organisms → cellular organisms → Bacteria	1378	Open in IMG/M
3300021178\|Ga0210408_11075408	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	620	Open in IMG/M
3300021432\|Ga0210384_11767578	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA3	524	Open in IMG/M
3300021478\|Ga0210402_11517235	All Organisms → cellular organisms → Bacteria → Acidobacteria	597	Open in IMG/M
3300021479\|Ga0210410_11364454	All Organisms → cellular organisms → Bacteria → Acidobacteria	602	Open in IMG/M
3300021861\|Ga0213853_10658258	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	500	Open in IMG/M
3300022504\|Ga0242642_1010062	All Organisms → cellular organisms → Bacteria	1151	Open in IMG/M
3300022531\|Ga0242660_1006228	All Organisms → cellular organisms → Bacteria	1875	Open in IMG/M
3300022533\|Ga0242662_10242995	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	582	Open in IMG/M
3300022724\|Ga0242665_10327697	All Organisms → cellular organisms → Bacteria → Acidobacteria	543	Open in IMG/M
3300022726\|Ga0242654_10098634	All Organisms → cellular organisms → Bacteria	915	Open in IMG/M
3300025934\|Ga0207686_11470191	Not Available	561	Open in IMG/M
3300025936\|Ga0207670_10321421	All Organisms → cellular organisms → Bacteria	1218	Open in IMG/M
3300025961\|Ga0207712_10773038	All Organisms → cellular organisms → Bacteria	843	Open in IMG/M
3300025986\|Ga0207658_11160215	All Organisms → cellular organisms → Bacteria → Acidobacteria	706	Open in IMG/M
3300026307\|Ga0209469_1100199	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	800	Open in IMG/M
3300026313\|Ga0209761_1231401	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	758	Open in IMG/M
3300026327\|Ga0209266_1053157	Not Available	1980	Open in IMG/M
3300026524\|Ga0209690_1172360	Not Available	737	Open in IMG/M
3300027910\|Ga0209583_10553291	All Organisms → cellular organisms → Bacteria → Acidobacteria	578	Open in IMG/M
3300028379\|Ga0268266_12277553	All Organisms → cellular organisms → Bacteria → Acidobacteria	513	Open in IMG/M
3300028536\|Ga0137415_11345536	All Organisms → cellular organisms → Bacteria	534	Open in IMG/M
3300030706\|Ga0310039_10330004	All Organisms → cellular organisms → Bacteria → Acidobacteria	572	Open in IMG/M
3300031231\|Ga0170824_110359850	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	533	Open in IMG/M
3300031231\|Ga0170824_128369091	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	601	Open in IMG/M
3300031236\|Ga0302324_102518325	All Organisms → cellular organisms → Bacteria	628	Open in IMG/M
3300031236\|Ga0302324_102976998	All Organisms → cellular organisms → Bacteria	564	Open in IMG/M
3300031474\|Ga0170818_101395324	All Organisms → cellular organisms → Bacteria → Acidobacteria	626	Open in IMG/M
3300031573\|Ga0310915_10595085	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 37-65-4	784	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	80.71%
Host-Associated	Host-Associated	18.57%
Engineered	Engineered	0.71%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	75.00%
Plants	Host-Associated → Plants	18.57%
Aquatic	Environmental → Aquatic	5.71%
Solid Waste	Engineered → Solid Waste	0.71%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	71.43%
Rhizosphere	Host-Associated → Plants → Rhizosphere	13.57%
Sediment	Environmental → Aquatic → Sediment	3.57%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.86%
Cave	Environmental → Terrestrial → Cave	2.14%
Roots	Host-Associated → Plants → Roots	2.14%
Freshwater	Environmental → Aquatic → Freshwater	1.43%
Peat	Environmental → Terrestrial → Peat	1.43%
Marine	Environmental → Aquatic → Marine	0.71%
Grass	Engineered → Solid Waste → Grass	0.71%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	62.86%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	10.00%
Loam	Environmental → Terrestrial → Soil → Loam	7.14%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.57%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.57%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	2.14%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.14%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	2.14%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.43%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.43%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.71%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.71%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.71%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.71%
Composting	Engineered → Solid Waste → Grass → Composting	0.71%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	30.71%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	17.86%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	12.86%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	10.00%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.71%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.57%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.57%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	2.14%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.14%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	2.14%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.43%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.43%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.43%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.71%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.71%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.71%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.71%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.71%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.71%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.71%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	12.14%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	9.29%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	8.57%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.71%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	5.71%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	5.00%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.29%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.86%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.86%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.14%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.14%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.14%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	2.14%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.14%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.14%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.14%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.14%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	1.43%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.43%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.43%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	1.43%
Microbial Mat On Rocks	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Microbial Mat On Rocks	1.43%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	1.43%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.43%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.43%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.43%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	0.71%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.71%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.71%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.71%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	0.71%
Bio-Ooze	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Bio-Ooze	0.71%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.71%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.71%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.71%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.71%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.71%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.71%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459014	Litter degradation PV2	Engineered	Open in IMG/M
3300000567	Peat soil microbial communities from Weissenstadt, Germany - SII-2010	Environmental	Open in IMG/M
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300002561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm	Environmental	Open in IMG/M
3300004013	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailA_D2	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005532	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen14_06102014_R1	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009609	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT890	Environmental	Open in IMG/M
3300009662	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-060	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010119	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010141	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_8_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010905	Grasslands soil microbial communities from Angelo Coastal Reserve, California, USA - 15_R_Wat_40_2_8_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012172	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT366_2	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012401	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_16_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012403	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_8_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012509	Unplanted soil (control) microbial communities from North Carolina - M.Soil.8.old.080610_6	Environmental	Open in IMG/M
3300012899	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S058-202B-2	Environmental	Open in IMG/M
3300012906	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S212-509R-1	Environmental	Open in IMG/M
3300012914	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S028-104C-2	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300014200	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019458	Bio-ooze microbial communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-3 metaG	Environmental	Open in IMG/M
3300019487	White microbial mat communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-4 metaG	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300020004	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a2	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021861	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2016 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022504	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-2-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022531	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-28-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022533	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022724	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026307	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123 (SPAdes)	Environmental	Open in IMG/M
3300026313	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026327	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132 (SPAdes)	Environmental	Open in IMG/M
3300026524	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150 (SPAdes)	Environmental	Open in IMG/M
3300027910	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes)	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300030706	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG (v2)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
2PV_00036920	2170459014	Switchgrass, Maize And Mischanthus Litter	RELGVIFTPARLHDPKATASGIKEFLITAKWTWGHDRVL
JGI12270J11330_102897961	3300000567	Peatlands Soil	GVIFTPQTLHNPDAVPGGVKEFRLSARHPWGEDRVM*
JGI1027J11758_108876011	3300000789	Soil	NGDGIEFPGLTYGNNVLDELLRELGVIFTPXKLHNPNATPSGKKEFDLSGRWTWGHDRVM
JGI10214J12806_122569172	3300000891	Soil	NNVLDELLRELGVIFNPANLHNPNATPSGKKEYDLSGRWTWGHDRVM*
JGI1027J12803_1032534912	3300000955	Soil	LGIVFNKQTLHNPKATPSGIKEFDISAKWTWGHDRVL*
JGI10216J12902_1061430971	3300000956	Soil	LRELGIVFNPKTLHNPQATPTGVKEFDISAKWTWGHDRVL*
JGI25384J37096_101697432	3300002561	Grasslands Soil	GCSVLDELLRELGVVFNPQTLHKPNSTTSGTKEFDLTARWTWGHDRVM*
Ga0055465_103282482	3300004013	Natural And Restored Wetlands	GNTVLEDLLRELGVIFTPASLHNPNATPSGTKEFDLSGRWTWGHDRVM*
Ga0066690_109947961	3300005177	Soil	GCAALEELLHELGVIFTPKTLHDPTATPGGVKEFALSARWTWGHDRVM*
Ga0066388_1025673591	3300005332	Tropical Forest Soil	TYGCQSLEELLRELGIVFNAQTLHNPKATPSGIKEFDISAKWTWGHDRVM*
Ga0070669_1006547731	3300005353	Switchgrass Rhizosphere	PGLTYGNAVLDELLRELGVIFTPAQLHNPNATPSGKKEFDLSGRWTWGHDRVM*
Ga0066682_101358633	3300005450	Soil	RELGVVFNPQTLHKPNSTASGTKEFDLTARWTWGHDRVM*
Ga0066682_102213572	3300005450	Soil	PGLSYGCSVLDELLRELGVVFNPQTLHNPDSTPSGTKEFDLTARWTWGHDRVM*
Ga0070662_1018009231	3300005457	Corn Rhizosphere	SLDELLHELGVIYTPQTLHNPRATPSGKKEFTLSGRWTWGHDRIL*
Ga0070685_102269142	3300005466	Switchgrass Rhizosphere	YGNAVLDELLRELGVIFTPAQLHNPNATPSGKKEFDLSGRWTWGHDRVM*
Ga0073909_107004381	3300005526	Surface Soil	YGNPSLDELLHELGVIYTPKTLHNPKATPSGKKEFTLSGRWTWGHDRIL*
Ga0070739_101752191	3300005532	Surface Soil	LGVIFNPQILHNPKATPNGIKEFVLSARWTWGHDRVM*
Ga0070735_105498822	3300005534	Surface Soil	GLTYGCASLDELLRELGVVFSAAKLHDPNATPTGVKEFRLSARFPWGHERVM*
Ga0066697_101009414	3300005540	Soil	IEFPGLSYGCSVLDELLRELGVVFNPQTLHKPNSTASGTKEFDLTARWTWGHDRVM*
Ga0066698_101389931	3300005558	Soil	DELLRELGVVFNPQTLHNPNSTPSGTKEFDLTARWTWGHERVM*
Ga0066698_103916103	3300005558	Soil	DELLRELGVVFNPQTLHNPNSTPSGTKEFDLTARWTWGHDRVM*
Ga0066706_106694851	3300005598	Soil	IEFPGLTYGCPSLDELLRELGIVFNAQTLHNPNATPGGVKEFDISARWTWGHDRVM*
Ga0066905_1008756312	3300005713	Tropical Forest Soil	DGIEFPGLTYGNNVLDELLRELGVIFTPANLHNPNATPSGKKEFDLSGRWTWGHDRVM*
Ga0068866_114418612	3300005718	Miscanthus Rhizosphere	GNPSLDELLHELGVIYTPQTLHNPRATPSGKKEFTLSGRWTWGHDRIL*
Ga0066903_1018062931	3300005764	Tropical Forest Soil	KDGMEFPGLTYGCASLEELLRELGIVFNKQTLHNPKATPSGIKEFDISAKWTWGHDRVM*
Ga0066903_1085911332	3300005764	Tropical Forest Soil	DAIEFPALTYGSPVLEELLRELGVVFSPQILHNPKATVSGIKEFVLSARWTWGHDRIL*
Ga0075030_1001234803	3300006162	Watersheds	LEALLREVGVVFTPAILHNPNATADGVKEFTLSAVNPWGHERVM*
Ga0075030_1006374281	3300006162	Watersheds	YGSAPLEALLREVGVVFTPAVLHNPNATADGVKEFSLSAVDPWGHERVM*
Ga0097621_1011581052	3300006237	Miscanthus Rhizosphere	LSYGNPMLEELLRELEVVFTPKTLHDPAATPDGVKEFRLSARWTWGHERVM*
Ga0066658_107559412	3300006794	Soil	LTYGCPSLDELLRELGIVFNAQTLHNPNATPGGVKEFDISARWTWGHDRVM*
Ga0066665_105510321	3300006796	Soil	IEFPGLSYGCSVLDELLRELGVVFNPQTLHKPNSTASGTKEIDLTARWTWGHDRVM*
Ga0066665_115872991	3300006796	Soil	GLEFPQLTYGCPALEGLLHELGVIFTPKTLHDPTATPGGVKEFALSARWTWGHDRVM*
Ga0075428_1004729471	3300006844	Populus Rhizosphere	TYGSASLEELLRELGIVFNKSTLHNPKATPSGTKEFDISAKWTWGHDRVM*
Ga0075433_104069472	3300006852	Populus Rhizosphere	RELGIVFNKQTLHNPKATPSGTKEFDISAKWTWGHDRVM*
Ga0075426_104539061	3300006903	Populus Rhizosphere	MEFPGLTYGSATLDVLMQELGVIYTPQTLHTPPATPGGMKEFRLSLRHPWGHERVM*
Ga0079218_105007403	3300007004	Agricultural Soil	ELGVIFTPEKLHNANATANGVKEFDLSGRWTWGHDRIL*
Ga0079218_119642692	3300007004	Agricultural Soil	LLRELGVIFTPAHLHNPNATPTGKKEFDLSGRWTWGHDRIL*
Ga0099794_103928592	3300007265	Vadose Zone Soil	LLQEVGVIFNPQTLHDPDATPGGVKEFRLSARWPWAHERVM*
Ga0066710_1020217992	3300009012	Grasslands Soil	DELMRELGIVFNPKTLHNPNATPSGVKEFDISAKWTWGHDRVM
Ga0066710_1028613461	3300009012	Grasslands Soil	RESIEFPGLTYGSAALEELLRELGVVFTPATLHIPNTANGVKEFDLSSRWTWGHDRVM
Ga0066710_1047602641	3300009012	Grasslands Soil	ELLRDLGVVFSPQVLHNPNATASGVKEFVLSAKWTWGHDRVM
Ga0105245_118779531	3300009098	Miscanthus Rhizosphere	KIEFPGLSYGNPSLDELLHELGVIYTPQTLHNPRATPSGKKEFTLSGRWTWGHDRIL*
Ga0066709_1000340361	3300009137	Grasslands Soil	GVVFNPQTLHNPDSTPSGTKEFDLTARWTWGHDRVM*
Ga0114129_117882142	3300009147	Populus Rhizosphere	SLEELLRELGIVFNKSTLHNPKATPSGTKEFDISAKWTWGHDRVM*
Ga0114129_119821131	3300009147	Populus Rhizosphere	LGVVFSPKTLHDPNATPSGVKEFVLSARWTWGHDRVM*
Ga0075423_117398311	3300009162	Populus Rhizosphere	EELLRELGVIFTPKTLHDPNSTPGGVKEFALSARWTWGHDRVM*
Ga0075423_119837752	3300009162	Populus Rhizosphere	SASLEELLRELGIVFNKSTLHNPKATPSGTKEFDISAKWTWGHDRVM*
Ga0116222_12076122	3300009521	Peatlands Soil	LDVNGDGIEFPGLTYGCAALEELLRELGVIFTPLTLHNPDATPGGVKEFRLSARHPWGEDRVM*
Ga0105249_115071802	3300009553	Switchgrass Rhizosphere	ELGVIFNPQSLHDPNSTPGGVKEFRLSARWTWGHDRVM*
Ga0105347_12126982	3300009609	Soil	DELLRELGVIFTPTHLHNPNATPSRKKEFDLSGRWTWGHDRIL*
Ga0105856_10782731	3300009662	Permafrost Soil	LREVGVVFTSATLHNPNATADGVKEFILSARDPWGHERVL*
Ga0126380_121913222	3300010043	Tropical Forest Soil	EFPGLSYGCSVLDELLRELGVVFNPQTLHNPNSTPSGTKEFDLTARWTWGHDRVM*
Ga0127452_11066082	3300010119	Grasslands Soil	PGLSYGCSVLDELLRELGVVFNPQTLHNPNSTPSGTKEFDLTARWTWGHDRVM*
Ga0127499_11874033	3300010141	Grasslands Soil	GLSYGCSVLDELLRELGVVFNPQTLHNPNSTPSGTKEFDLTARWTWGHDRVM*
Ga0134088_100348652	3300010304	Grasslands Soil	LRELGVVFNPQTLHNPNSTPSGTKEFDLTARWTWGHDRVM*
Ga0134088_103382282	3300010304	Grasslands Soil	GCSVLDELLRELGVVFNPQTLHNPNSTPSGTKEFDLTARWTWGHERVM*
Ga0126370_111012681	3300010358	Tropical Forest Soil	LGVVFSPQVLHNPKATPSGIKEFILSAKWTWGHDRVM*
Ga0126370_117690351	3300010358	Tropical Forest Soil	LGVVFNAQTLHNPNATPTGVKEFELTARWTWGHDRVM*
Ga0126370_126013631	3300010358	Tropical Forest Soil	SYGCSSLDELLRELGVVFSPQVLHNPKATPSGIKEFVLSAKWTWGHDRVM*
Ga0126377_115067282	3300010362	Tropical Forest Soil	SYGCSVLDELLRELGVVFNPRTLHNPNATPSGTKEFDLTARWTWGHDRVM*
Ga0126377_132661821	3300010362	Tropical Forest Soil	ELLRGLGVIFTPGSLHNLIGTASGSKEFDLSGRWSWGHDRVV*
Ga0126383_128303182	3300010398	Tropical Forest Soil	SPVLEELLRELGVVFSPQILHNPKATVSGIKEFVLSARWTWGHDRIL*
Ga0134127_121785422	3300010399	Terrestrial Soil	GVIFTPQNLHNPNATASGIKEFEVSARWTWGHDRVM*
Ga0134121_121070162	3300010401	Terrestrial Soil	LREVGVIFSPQTLHNPNATASGVKEFLLSARWPWGEDRIL*
Ga0134121_125209522	3300010401	Terrestrial Soil	LTYGNATLDELLRELGVVFNPQALHNPNATPSGVKEFELTARWTWGHDRVM*
Ga0138112_10584463	3300010905	Grasslands Soil	RDGIEFPGLSYGCSVLDELLRELGVVFNPQTLHNPNSTPSGTKEFDLTARWTWGHDRVM*
Ga0150983_129832993	3300011120	Forest Soil	GLTYGSPTLEDLLRELEVIFTPKTLHDPDATPNGVKEFRLSARWTWGHERVM*
Ga0150983_143909172	3300011120	Forest Soil	RELGVIFTAKTLHDPNATPDGVKEFRLSARWTWAHERVM*
Ga0150983_148179912	3300011120	Forest Soil	GNATLDELLRELGVVFNSQTLHNPNATPSGIKEFELTARWTWGHDRVL*
Ga0150983_150356231	3300011120	Forest Soil	PGLTYGSATLEDLLRELEVIFSPQTLHNPNTTPNGVKEYRLSARWTWGHERVM*
Ga0137320_11261271	3300012172	Soil	GIEFPGLTYGSTTLEELLRELGVVFSREVLHNPNATPSGTKEFLLSARWTWGHDRVL*
Ga0137377_103178001	3300012211	Vadose Zone Soil	IFTPENLHNPNATPGGVKEFRLSARHPWGHDRVM*
Ga0137377_109115212	3300012211	Vadose Zone Soil	HELGVIFTPKTLHDPTATPGGVKEFALSARWTWGHDRVM*
Ga0134055_11544273	3300012401	Grasslands Soil	VVFNPQTLHNPNSTPSGTKDFDLSARWTWGHDRVM*
Ga0134049_10875451	3300012403	Grasslands Soil	VVFNPQTLHNPDSTPSGTKEFDLTARWTWGHDRVM*
Ga0134049_12540732	3300012403	Grasslands Soil	VFNPQTLHNPNSTPSGTKEFDLTARWTWGHDRVM*
Ga0157334_10748191	3300012509	Soil	VIFTPQNLHNPKATASGIKEFEISARWTWGHDRVM*
Ga0157299_100990572	3300012899	Soil	IEFPGLTYGNSVLDELLRELGVIFTPAQLHNPNATPSGKKEFDLSGRWTWGHDRVM*
Ga0157295_100083784	3300012906	Soil	IYSPQTLHNPKATAGGKKEFTLSGRWTWGHDRIL*
Ga0157297_103109092	3300012914	Soil	GNPSLDELLRELGVIYTPKTLHNPSATPSGKKEFTLSGRWTWGHDRIL*
Ga0137359_111008031	3300012923	Vadose Zone Soil	EPLLHEVGVVFVAQTLHDPNTTPSGVKEFDLSARFPWGHERVM*
Ga0137404_121889012	3300012929	Vadose Zone Soil	EFPGLTYGCAALEELLRELGVIFTPKTLHDPNATPGGVKEFALSARWTWGHERVM*
Ga0137407_121095762	3300012930	Vadose Zone Soil	EFPGLTYGCAALEELLRELGVIFTPQNLHDPNSTPGGIKEFRLSARWTWGHDRVM*
Ga0134077_103365961	3300012972	Grasslands Soil	GCAALDELLHELGVVFNPQTLHNPKATPSGIKEFDLSARWTWGHDRVM*
Ga0164305_115719152	3300012989	Soil	LDVLMQELGVVYSPQSLHQPPQTPSGIKEFRLSARHPWGHDRVM*
Ga0157374_109790941	3300013296	Miscanthus Rhizosphere	LDELLHELGVIYTPQTLHNPRATPSGKKEFTLSGRWTWGHDRIL*
Ga0134075_101711121	3300014154	Grasslands Soil	ELGVVFNPQTLHNPNSTPSGTKEFDLTARWTWGHDRVM*
Ga0181526_102927251	3300014200	Bog	CGSATLEVLLEELGVVFSPQTLHNPNATPSGVKEFDLSARYTWGNDRVM*
Ga0163163_109608241	3300014325	Switchgrass Rhizosphere	EFPGLTYGCGSLDEILRELGVIFTPSVLHNANATPDGVKEFRLSARHPWGEDRVM*
Ga0163163_110569053	3300014325	Switchgrass Rhizosphere	PSLTYGCTALEELLRELGVIFTPQNLHNPNATASGIKEFEVSARWTWGHDRVM*
Ga0157380_127860542	3300014326	Switchgrass Rhizosphere	DGIEFPGLTYGNSVLDELLRELGVIFTPAQLHNPNATPSGKKEFDLSGRWTWGHDRVM*
Ga0157377_105174881	3300014745	Miscanthus Rhizosphere	LLRELGIVFNKQTLHNPKATPSGVKEFDISAKWTWGHDRVM*
Ga0134089_100083021	3300015358	Grasslands Soil	ELLRELGVVFNPQTLHKPNSTTSGTKEFDLTARWTWGHDRVM*
Ga0132258_138590052	3300015371	Arabidopsis Rhizosphere	GSQILEDLLRELGVVFNAQTLHNPNATPSGVKEFRLSARWTWGHDRVM*
Ga0132256_1016418332	3300015372	Arabidopsis Rhizosphere	IFTPAQLHNPNATPSGKKEFDLSGRWTWGHDRVM*
Ga0132255_1046607112	3300015374	Arabidopsis Rhizosphere	VVFNPQILHNPKATPSGVKEFDISAKWTWGHDRVM*
Ga0132255_1048474832	3300015374	Arabidopsis Rhizosphere	TVLDELLRELGVIFTPAQLHNPNATPSGKKEFDLSGRWTWGHDRVM*
Ga0182036_108762981	3300016270	Soil	LRELGVVFNPQTLHNPKATATGVKEFDISAKWTWGHDRVM
Ga0182041_120051602	3300016294	Soil	CLVLDELLRELGVVFNPQTLHNPNATPSGTKEFDLSARWTWGHDRVM
Ga0182032_106452472	3300016357	Soil	YGNKTLDELLRELGVVFNTQTLHNPKATATGVKEFDISAKWTWGHHRVM
Ga0134112_100692312	3300017656	Grasslands Soil	SVLDELLRELGVVFNPQTLHNPNSTPSGTKEFDLTARWTWGHDRVM
Ga0134112_104579252	3300017656	Grasslands Soil	GVVFNPQSLHNPNATASGIKEFDLSSRWTWGHDRIL
Ga0187776_113872942	3300017966	Tropical Peatland	EFPSLSYGCSSLDELLRELGVVFSPQVLHNPKATPSGIKEFVLSAKWTWGHDRAM
Ga0066662_123297181	3300018468	Grasslands Soil	LTYGSTTLEMLLEELGVIFTPQTLHNPNATPDGVKEFRLSVRWPWGNERVM
Ga0066669_109653462	3300018482	Grasslands Soil	ELLHELAVIFTPKTLHDPTATPGGVKEFALSARWTWGHDRVM
Ga0187892_101494873	3300019458	Bio-Ooze	VNHDAIEFPGLTYGSATLEELLRELGAIFTPQILHNPNATPSGNKEFVLSAKWTWGHDRV
Ga0187893_106090802	3300019487	Microbial Mat On Rocks	ERLLRELGVVFTAQTLHNPDATPSGVKEFRLSARWTWAHDRVM
Ga0187893_108203041	3300019487	Microbial Mat On Rocks	ELGVIFTPQILHNPNATPSGNKEFVLSAKWTWGHDRVL
Ga0137408_10694231	3300019789	Vadose Zone Soil	LRELGVVFNPQSLHNPNATASGIKEFDLSSRWTWGHDRIL
Ga0193755_11702401	3300020004	Soil	LTYGNPTLERLLVELGVVFTPQNLHNPNATPSGRKEYILSARWTWGHDRVM
Ga0210405_103210221	3300021171	Soil	LRELGVIFSSQALHNPNATADGVKEFRLSARWTWGHERVM
Ga0210408_102617681	3300021178	Soil	LRELGVIFSPQALHNPNATPDGVKEFRLSARWTWGHERVM
Ga0210408_110754082	3300021178	Soil	LEFPGLTYGSATLEELLRELGVIFTPKTLHNPNATPDGVKEFRLSARWTWGHERVM
Ga0210384_117675781	3300021432	Soil	ALRDVNGDGIEFPGLTYGSAALEALLREVGVMFTPATLHNPNATATGVKEFSLSAVNPWGHERVL
Ga0210402_115172351	3300021478	Soil	LEFPGLTYGSANLEELLRELGVIFNPQSLHNPNATPDGVKEFRLSARWTWGHERVM
Ga0210410_113644542	3300021479	Soil	LLRELGVIFTPQTLHNPDATPDGVKEFRLSARWTWGHERVM
Ga0213853_106582581	3300021861	Watersheds	SATLETLLRELGVIFTPQTLHNPNATPDGVKEFRLSARWTWAHERVM
Ga0242642_10100623	3300022504	Soil	LEFPGLTYGSATLEELLRELGVIFTPKTLHDPNATPDGVKEFRLSARWTWAHERVM
Ga0242660_10062281	3300022531	Soil	VIFTPKTLHNPNATPDGVKEFRLSARWTWGHERVM
Ga0242662_102429951	3300022533	Soil	KTVVRDVNGDGLEFPGLTYGSATLETLLRELGVIFTPQTLHNPDATPDGVKEFRLSARWTWGHERVM
Ga0242665_103276972	3300022724	Soil	CATLEMVLREVGVVFTPATLHNPNATADGVKEFILSARDPWGHERVL
Ga0242654_100986341	3300022726	Soil	EKTVVRDVNGDGLEFPGLTYGSATLEELLRELGVIFTPKTLHDPNVTPDGVKEFRLSARWTWGHERVM
Ga0207686_114701912	3300025934	Miscanthus Rhizosphere	LTYGNNVLDELLRELGVIFTPANLHNPHSTPSGKKEFDLSGRWTWGHDRVM
Ga0207670_103214212	3300025936	Switchgrass Rhizosphere	ELLRELGVIFTPSQLHNPNATPSGKKEFDLSGRWTWGHDRVM
Ga0207712_107730381	3300025961	Switchgrass Rhizosphere	AALEELMRELGIVFNKQTLHNPKATPSGTKEFDISAKWTWGHDRVM
Ga0207658_111602151	3300025986	Switchgrass Rhizosphere	KVEVIFTPQTLHDPGATPNGVKEFRLSARWTWGHERVM
Ga0209469_11001993	3300026307	Soil	LLRELGVVFNPQTLHNPNSTPSGTKEFDLTARWTWGHDRVM
Ga0209761_12314011	3300026313	Grasslands Soil	DGIEFPGLSYGCSVLDELLRELGVVFNPQTLHNPNSTPSGTKEFDLTARWTWGHDRVM
Ga0209266_10531571	3300026327	Soil	VLDELLRELGVVFNPQTLHNPNSTPSGTKEFDLTARWTWGHDRVM
Ga0209690_11723602	3300026524	Soil	SYGCSVLDELLRELGVVFNPQTLHKPNSTASGTKEFDLTARWTWGHDRVM
Ga0209583_105532911	3300027910	Watersheds	SYGNSLLDELLRELGVIFTPSRLHDPKATPSGKKEFDLSGRWTWGHDRVL
Ga0268266_122775532	3300028379	Switchgrass Rhizosphere	EFLGLTYGNAVLDELLRELGVIFTPAQLHNPNATPSGKKEFDLSGRWTWGHDRVM
Ga0137415_113455361	3300028536	Vadose Zone Soil	TDATEELLRELGVIFTPKTLHDPNVTPDGVKEFRLSARWTWGHERVM
Ga0310039_103300041	3300030706	Peatlands Soil	ELGVIFTPQTLHNPDAVPGGVKEFRLSARHPWGEDRVM
Ga0170824_1103598502	3300031231	Forest Soil	EELLRELGVIFTPKTLHDPNATPDGVKEFRLSARWTWGHERVM
Ga0170824_1283690912	3300031231	Forest Soil	GNATLDELLRELGVVFNPQTLHNPKATPSGVKEFDISAKWTWGHDRVM
Ga0302324_1025183251	3300031236	Palsa	LTYGSAVLEELLRELEVVFTPQVLHNPDATPGGIKEFSLSARWTWGHERVM
Ga0302324_1029769983	3300031236	Palsa	PGLTYGCPAVDELLRELGVVFSPAVLHNPNATPSGVKEFILSARWTWGHDRVL
Ga0170818_1013953241	3300031474	Forest Soil	TLLRELGVIFTPQTLHNPDATPDGVKEFRLSARWTWGHERVM
Ga0310915_105950851	3300031573	Soil	DSIEFPGLTYGNPALEALLHEVGVVFKPATLHDPNATPDGVKEFSLSARHPWGHERVM

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F054116

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences