Metagenome Family F053972

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F053972
Family Type	Metagenome
Number of Sequences	140
Average Sequence Length	58 residues
Representative Sequence	MIGFITALVYFALVLLAIGTILAFLTSWRDGCLGKDVAQIKSGLVWVYLRIKKFAQQKNT
Number of Associated Samples	85
Number of Associated Scaffolds	140

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	79.29 %
% of genes near scaffold ends (potentially truncated)	39.29 %
% of genes from short scaffolds (< 2000 bps)	87.86 %
Associated GOLD sequencing projects	77
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.40

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Unclassified (73.571 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater (62.857 % of family members)
Environment Ontology (ENVO)	Unclassified (91.429 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (97.857 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 62.50% β-sheet: 0.00% Coil/Unstructured: 37.50%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.40
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.40
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 140 Family Scaffolds
PF00574	CLP_protease	5.00
PF13537	GATase_7	2.14
PF13578	Methyltransf_24	2.14
PF00313	CSD	0.71
PF00471	Ribosomal_L33	0.71
PF00389	2-Hacid_dh	0.71
PF01370	Epimerase	0.71
PF13649	Methyltransf_25	0.71
PF13522	GATase_6	0.71

COG ID	Name	Functional Category	% Frequency in 140 Family Scaffolds
COG0616	Periplasmic serine protease, ClpP class	Posttranslational modification, protein turnover, chaperones [O]	10.00
COG0740	ATP-dependent protease ClpP, protease subunit	Posttranslational modification, protein turnover, chaperones [O]	10.00
COG1030	Membrane-bound serine protease NfeD, ClpP class	Posttranslational modification, protein turnover, chaperones [O]	5.00
COG0267	Ribosomal protein L33	Translation, ribosomal structure and biogenesis [J]	0.71

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	73.57 %
All Organisms	root	All Organisms	26.43 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	73.57 %
cellular organisms	root	All Organisms → cellular organisms	16.43 %
Viruses	superkingdom	All Organisms → Viruses	10.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	73.57 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	16.43 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	10.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	73.57 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	15.00 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	10.00 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	1.43 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	73.57 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	15.00 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	10.00 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	1.43 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	73.57 %
Rickettsiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales	11.43 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	10.00 %
Pelagibacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales	3.57 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1.43 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	73.57 %
unclassified Rickettsiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales	11.43 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	10.00 %
Pelagibacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae	3.57 %
Flavobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia	1.43 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	73.57 %
Rickettsiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	11.43 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	10.00 %
Candidatus Pelagibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	3.57 %
Flavobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	1.43 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	73.57 %
Rickettsiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	11.43 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	10.00 %
unclassified Candidatus Pelagibacter	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter	3.57 %
Flavobacteriaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae	1.43 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	73.57 %
Rickettsiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	11.43 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	10.00 %
Candidatus Pelagibacter sp. TMED203	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED203	3.57 %
unclassified Flavobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae	1.43 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	73.57 %
Rickettsiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	11.43 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	10.00 %
Candidatus Pelagibacter sp. TMED203	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED203	3.57 %
Flavobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium	1.43 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001460\|JGI24003J15210_10012582	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	3376	Open in IMG/M
3300001460\|JGI24003J15210_10056631	Not Available	1282	Open in IMG/M
3300004448\|Ga0065861_1180167	Not Available	801	Open in IMG/M
3300004457\|Ga0066224_1124008	Not Available	1361	Open in IMG/M
3300004461\|Ga0066223_1020402	Not Available	1254	Open in IMG/M
3300005523\|Ga0066865_10302105	Not Available	605	Open in IMG/M
3300006737\|Ga0098037_1145731	Not Available	797	Open in IMG/M
3300009071\|Ga0115566_10344090	Not Available	870	Open in IMG/M
3300009435\|Ga0115546_1028812	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium	2262	Open in IMG/M
3300009437\|Ga0115556_1020596	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium	3144	Open in IMG/M
3300009440\|Ga0115561_1235846	Not Available	686	Open in IMG/M
3300009443\|Ga0115557_1140788	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	983	Open in IMG/M
3300009443\|Ga0115557_1400698	Not Available	505	Open in IMG/M
3300009447\|Ga0115560_1301203	Not Available	610	Open in IMG/M
3300009476\|Ga0115555_1020063	All Organisms → Viruses → Predicted Viral	3378	Open in IMG/M
3300009495\|Ga0115571_1138605	Not Available	1027	Open in IMG/M
3300009495\|Ga0115571_1346594	Not Available	587	Open in IMG/M
3300009495\|Ga0115571_1388922	Not Available	545	Open in IMG/M
3300009505\|Ga0115564_10202187	Not Available	1035	Open in IMG/M
3300009505\|Ga0115564_10294610	Not Available	814	Open in IMG/M
3300009508\|Ga0115567_10339654	Not Available	934	Open in IMG/M
3300009508\|Ga0115567_10729568	Not Available	593	Open in IMG/M
3300009593\|Ga0115011_10157991	All Organisms → Viruses → Predicted Viral	1649	Open in IMG/M
3300010153\|Ga0098059_1095595	All Organisms → Viruses → Predicted Viral	1181	Open in IMG/M
3300012953\|Ga0163179_10063462	Not Available	2576	Open in IMG/M
3300017706\|Ga0181377_1008866	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	2494	Open in IMG/M
3300017708\|Ga0181369_1006032	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	3202	Open in IMG/M
3300017709\|Ga0181387_1000971	Not Available	6137	Open in IMG/M
3300017709\|Ga0181387_1023266	Not Available	1207	Open in IMG/M
3300017709\|Ga0181387_1023302	All Organisms → Viruses → Predicted Viral	1207	Open in IMG/M
3300017709\|Ga0181387_1064254	Not Available	737	Open in IMG/M
3300017710\|Ga0181403_1056297	Not Available	821	Open in IMG/M
3300017710\|Ga0181403_1124654	Not Available	537	Open in IMG/M
3300017713\|Ga0181391_1031331	All Organisms → Viruses → Predicted Viral	1295	Open in IMG/M
3300017713\|Ga0181391_1052911	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED203	955	Open in IMG/M
3300017713\|Ga0181391_1093083	Not Available	684	Open in IMG/M
3300017713\|Ga0181391_1099028	Not Available	659	Open in IMG/M
3300017714\|Ga0181412_1156312	Not Available	511	Open in IMG/M
3300017717\|Ga0181404_1036753	Not Available	1248	Open in IMG/M
3300017717\|Ga0181404_1136958	Not Available	593	Open in IMG/M
3300017719\|Ga0181390_1058165	All Organisms → Viruses → Predicted Viral	1117	Open in IMG/M
3300017719\|Ga0181390_1095639	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	801	Open in IMG/M
3300017719\|Ga0181390_1099956	Not Available	777	Open in IMG/M
3300017719\|Ga0181390_1107351	Not Available	740	Open in IMG/M
3300017719\|Ga0181390_1137272	Not Available	626	Open in IMG/M
3300017719\|Ga0181390_1174969	Not Available	527	Open in IMG/M
3300017720\|Ga0181383_1001522	Not Available	6670	Open in IMG/M
3300017720\|Ga0181383_1069248	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	948	Open in IMG/M
3300017721\|Ga0181373_1005916	All Organisms → Viruses → Predicted Viral	2332	Open in IMG/M
3300017724\|Ga0181388_1043463	Not Available	1091	Open in IMG/M
3300017724\|Ga0181388_1055881	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	950	Open in IMG/M
3300017724\|Ga0181388_1084144	Not Available	758	Open in IMG/M
3300017725\|Ga0181398_1092677	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	721	Open in IMG/M
3300017725\|Ga0181398_1140720	Not Available	573	Open in IMG/M
3300017725\|Ga0181398_1154770	Not Available	543	Open in IMG/M
3300017726\|Ga0181381_1063011	Not Available	802	Open in IMG/M
3300017728\|Ga0181419_1043862	Not Available	1183	Open in IMG/M
3300017728\|Ga0181419_1052391	Not Available	1061	Open in IMG/M
3300017728\|Ga0181419_1175795	Not Available	507	Open in IMG/M
3300017729\|Ga0181396_1140267	Not Available	501	Open in IMG/M
3300017730\|Ga0181417_1033173	Not Available	1272	Open in IMG/M
3300017730\|Ga0181417_1081989	Not Available	782	Open in IMG/M
3300017734\|Ga0187222_1051363	Not Available	961	Open in IMG/M
3300017735\|Ga0181431_1032688	All Organisms → Viruses → Predicted Viral	1192	Open in IMG/M
3300017737\|Ga0187218_1161626	Not Available	527	Open in IMG/M
3300017738\|Ga0181428_1137774	Not Available	571	Open in IMG/M
3300017739\|Ga0181433_1149659	Not Available	550	Open in IMG/M
3300017740\|Ga0181418_1047736	All Organisms → Viruses → Predicted Viral	1069	Open in IMG/M
3300017740\|Ga0181418_1074009	Not Available	834	Open in IMG/M
3300017743\|Ga0181402_1010625	All Organisms → Viruses → Predicted Viral	2778	Open in IMG/M
3300017744\|Ga0181397_1008187	All Organisms → Viruses → Predicted Viral	3284	Open in IMG/M
3300017744\|Ga0181397_1073559	Not Available	919	Open in IMG/M
3300017744\|Ga0181397_1188729	Not Available	518	Open in IMG/M
3300017745\|Ga0181427_1042614	All Organisms → Viruses → Predicted Viral	1126	Open in IMG/M
3300017745\|Ga0181427_1067959	Not Available	876	Open in IMG/M
3300017745\|Ga0181427_1079340	Not Available	805	Open in IMG/M
3300017745\|Ga0181427_1147130	Not Available	571	Open in IMG/M
3300017748\|Ga0181393_1000930	Not Available	10804	Open in IMG/M
3300017748\|Ga0181393_1124363	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	652	Open in IMG/M
3300017748\|Ga0181393_1160221	Not Available	557	Open in IMG/M
3300017749\|Ga0181392_1048139	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	1314	Open in IMG/M
3300017749\|Ga0181392_1099562	Not Available	869	Open in IMG/M
3300017749\|Ga0181392_1194769	Not Available	584	Open in IMG/M
3300017749\|Ga0181392_1199328	Not Available	575	Open in IMG/M
3300017750\|Ga0181405_1098424	Not Available	738	Open in IMG/M
3300017750\|Ga0181405_1099022	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	735	Open in IMG/M
3300017750\|Ga0181405_1122304	Not Available	649	Open in IMG/M
3300017750\|Ga0181405_1149996	Not Available	576	Open in IMG/M
3300017751\|Ga0187219_1191037	Not Available	570	Open in IMG/M
3300017753\|Ga0181407_1061378	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED203	973	Open in IMG/M
3300017753\|Ga0181407_1128982	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	629	Open in IMG/M
3300017755\|Ga0181411_1201920	Not Available	558	Open in IMG/M
3300017756\|Ga0181382_1045094	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	1287	Open in IMG/M
3300017756\|Ga0181382_1069903	Not Available	983	Open in IMG/M
3300017756\|Ga0181382_1112352	Not Available	731	Open in IMG/M
3300017757\|Ga0181420_1102675	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED203	879	Open in IMG/M
3300017758\|Ga0181409_1060595	Not Available	1156	Open in IMG/M
3300017758\|Ga0181409_1125145	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	758	Open in IMG/M
3300017759\|Ga0181414_1189742	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED203	533	Open in IMG/M
3300017760\|Ga0181408_1000726	Not Available	10424	Open in IMG/M
3300017760\|Ga0181408_1151743	Not Available	597	Open in IMG/M
3300017762\|Ga0181422_1127409	Not Available	787	Open in IMG/M
3300017762\|Ga0181422_1202476	Not Available	598	Open in IMG/M
3300017763\|Ga0181410_1192720	Not Available	561	Open in IMG/M
3300017767\|Ga0181406_1058266	Not Available	1190	Open in IMG/M
3300017768\|Ga0187220_1209801	Not Available	586	Open in IMG/M
3300017768\|Ga0187220_1263001	Not Available	515	Open in IMG/M
3300017770\|Ga0187217_1169449	Not Available	727	Open in IMG/M
3300017770\|Ga0187217_1285153	Not Available	534	Open in IMG/M
3300017771\|Ga0181425_1109852	Not Available	881	Open in IMG/M
3300017773\|Ga0181386_1098689	Not Available	912	Open in IMG/M
3300017776\|Ga0181394_1074107	All Organisms → Viruses → Predicted Viral	1113	Open in IMG/M
3300017776\|Ga0181394_1111549	Not Available	867	Open in IMG/M
3300017779\|Ga0181395_1040602	All Organisms → Viruses → Predicted Viral	1555	Open in IMG/M
3300017782\|Ga0181380_1239572	Not Available	603	Open in IMG/M
3300017782\|Ga0181380_1324736	Not Available	501	Open in IMG/M
3300020388\|Ga0211678_10396414	Not Available	548	Open in IMG/M
3300020421\|Ga0211653_10004535	Not Available	7251	Open in IMG/M
3300020440\|Ga0211518_10507608	Not Available	543	Open in IMG/M
3300020469\|Ga0211577_10597309	Not Available	658	Open in IMG/M
3300021365\|Ga0206123_10294324	Not Available	693	Open in IMG/M
3300024297\|Ga0228658_1122003	Not Available	634	Open in IMG/M
3300024428\|Ga0233396_1150524	Not Available	513	Open in IMG/M
3300025099\|Ga0208669_1040542	Not Available	1097	Open in IMG/M
3300025120\|Ga0209535_1028540	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED203	2674	Open in IMG/M
3300025120\|Ga0209535_1053009	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	1713	Open in IMG/M
3300025120\|Ga0209535_1068222	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	1411	Open in IMG/M
3300025120\|Ga0209535_1090739	Not Available	1124	Open in IMG/M
3300025137\|Ga0209336_10002356	Not Available	8984	Open in IMG/M
3300025138\|Ga0209634_1257438	Not Available	627	Open in IMG/M
3300025168\|Ga0209337_1115422	Not Available	1221	Open in IMG/M
3300025626\|Ga0209716_1112689	Not Available	755	Open in IMG/M
3300025680\|Ga0209306_1198129	Not Available	549	Open in IMG/M
3300025821\|Ga0209600_1163991	Not Available	609	Open in IMG/M
3300025892\|Ga0209630_10094922	Not Available	1625	Open in IMG/M
3300028297\|Ga0228617_1104890	Not Available	685	Open in IMG/M
3300028418\|Ga0228615_1088872	Not Available	861	Open in IMG/M
3300031519\|Ga0307488_10434010	Not Available	802	Open in IMG/M
3300031519\|Ga0307488_10731870	Not Available	555	Open in IMG/M
3300031851\|Ga0315320_10558247	Not Available	760	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	100.00%

Habitat	Taxonomy	Distribution
Strait	Environmental → Aquatic → Marine → Strait	62.86%
Pelagic	Environmental → Aquatic → Marine → Pelagic	13.57%
Oceanic	Environmental → Aquatic → Marine → Oceanic	12.86%
Coastal	Environmental → Aquatic → Marine → Coastal	6.43%
Unclassified	Environmental → Aquatic → Marine → Unclassified	2.86%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	0.71%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	0.71%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	62.86%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	13.57%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	12.86%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	6.43%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	2.86%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	0.71%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	0.71%

Habitat	Taxonomy	Distribution
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	62.86%
Pelagic Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine	12.86%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	12.14%
Seawater	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater	2.86%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	2.86%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	2.14%
Sackhole Brine	Environmental → Aquatic → Marine → Coastal → Unclassified → Sackhole Brine	1.43%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	0.71%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	0.71%
Seawater	Environmental → Aquatic → Marine → Pelagic → Unclassified → Seawater	0.71%
Pelagic Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine	0.71%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001460	Marine viral communities from the Pacific Ocean - LP-28	Environmental	Open in IMG/M
3300004448	Marine viral communities from Newfoundland, Canada BC-1	Environmental	Open in IMG/M
3300004457	Marine viral communities from Newfoundland, Canada MC-1	Environmental	Open in IMG/M
3300004461	Marine viral communities from Newfoundland, Canada BC-2	Environmental	Open in IMG/M
3300005523	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F12-01SV265	Environmental	Open in IMG/M
3300006737	Marine viral communities from the Subarctic Pacific Ocean - 5_ETSP_OMZ_AT15132 metaG	Environmental	Open in IMG/M
3300009071	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120405	Environmental	Open in IMG/M
3300009435	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100413	Environmental	Open in IMG/M
3300009437	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110414	Environmental	Open in IMG/M
3300009440	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110512	Environmental	Open in IMG/M
3300009443	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110421	Environmental	Open in IMG/M
3300009447	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110509	Environmental	Open in IMG/M
3300009476	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110407	Environmental	Open in IMG/M
3300009495	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120531	Environmental	Open in IMG/M
3300009505	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110523	Environmental	Open in IMG/M
3300009508	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120412	Environmental	Open in IMG/M
3300009593	Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT8 Metagenome	Environmental	Open in IMG/M
3300010153	Marine viral communities from the Subarctic Pacific Ocean - 20_ETSP_OMZ_AT15318 metaG	Environmental	Open in IMG/M
3300012953	Marine eukaryotic phytoplankton communities from the Atlantic Ocean - Atlantic ANT 2 Metagenome	Environmental	Open in IMG/M
3300017706	Marine viral communities from the Subarctic Pacific Ocean - Lowphox_13 viral metaG	Environmental	Open in IMG/M
3300017708	Marine viral communities from the Subarctic Pacific Ocean - Lowphox_04 viral metaG	Environmental	Open in IMG/M
3300017709	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 10 SPOT_SRF_2010-04-27	Environmental	Open in IMG/M
3300017710	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 26 SPOT_SRF_2011-09-28	Environmental	Open in IMG/M
3300017713	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 14 SPOT_SRF_2010-08-11	Environmental	Open in IMG/M
3300017714	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 35 SPOT_SRF_2012-08-15	Environmental	Open in IMG/M
3300017717	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 27 SPOT_SRF_2011-10-25	Environmental	Open in IMG/M
3300017719	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 13 SPOT_SRF_2010-07-21	Environmental	Open in IMG/M
3300017720	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 6 SPOT_SRF_2009-12-23	Environmental	Open in IMG/M
3300017721	Marine viral communities from the Subarctic Pacific Ocean - Lowphox_09 viral metaG	Environmental	Open in IMG/M
3300017724	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 11 SPOT_SRF_2010-05-17	Environmental	Open in IMG/M
3300017725	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 21 SPOT_SRF_2011-04-29	Environmental	Open in IMG/M
3300017726	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 4 SPOT_SRF_2009-09-24	Environmental	Open in IMG/M
3300017728	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 42 SPOT_SRF_2013-04-24	Environmental	Open in IMG/M
3300017729	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 19 SPOT_SRF_2011-01-11	Environmental	Open in IMG/M
3300017730	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 40 SPOT_SRF_2013-02-13	Environmental	Open in IMG/M
3300017734	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 4 SPOT_SRF_2009-09-24 (version 2)	Environmental	Open in IMG/M
3300017735	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 54 SPOT_SRF_2014-05-21	Environmental	Open in IMG/M
3300017737	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 14 SPOT_SRF_2010-08-11 (version 2)	Environmental	Open in IMG/M
3300017738	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 51 SPOT_SRF_2014-02-12	Environmental	Open in IMG/M
3300017739	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 56 SPOT_SRF_2014-09-10	Environmental	Open in IMG/M
3300017740	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 41 SPOT_SRF_2013-03-13	Environmental	Open in IMG/M
3300017743	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 25 SPOT_SRF_2011-08-17	Environmental	Open in IMG/M
3300017744	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 20 SPOT_SRF_2011-02-23	Environmental	Open in IMG/M
3300017745	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 50 SPOT_SRF_2014-01-15	Environmental	Open in IMG/M
3300017748	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 16 SPOT_SRF_2010-10-21	Environmental	Open in IMG/M
3300017749	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 15 SPOT_SRF_2010-09-15	Environmental	Open in IMG/M
3300017750	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 28 SPOT_SRF_2011-11-29	Environmental	Open in IMG/M
3300017751	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 13 SPOT_SRF_2010-07-21 (version 2)	Environmental	Open in IMG/M
3300017753	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 30 SPOT_SRF_2012-01-26	Environmental	Open in IMG/M
3300017755	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 34 SPOT_SRF_2012-07-09	Environmental	Open in IMG/M
3300017756	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 5 SPOT_SRF_2009-10-22	Environmental	Open in IMG/M
3300017757	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 43 SPOT_SRF_2013-05-22	Environmental	Open in IMG/M
3300017758	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 32 SPOT_SRF_2012-05-30	Environmental	Open in IMG/M
3300017759	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 37 SPOT_SRF_2012-11-28	Environmental	Open in IMG/M
3300017760	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 31 SPOT_SRF_2012-02-16	Environmental	Open in IMG/M
3300017762	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 45 SPOT_SRF_2013-07-18	Environmental	Open in IMG/M
3300017763	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 33 SPOT_SRF_2012-06-20	Environmental	Open in IMG/M
3300017767	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 29 SPOT_SRF_2011-12-20	Environmental	Open in IMG/M
3300017768	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 6 SPOT_SRF_2009-12-23 (version 2)	Environmental	Open in IMG/M
3300017770	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 15 SPOT_SRF_2010-09-15 (version 2)	Environmental	Open in IMG/M
3300017771	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 48 SPOT_SRF_2013-11-13	Environmental	Open in IMG/M
3300017773	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 9 SPOT_SRF_2010-03-24	Environmental	Open in IMG/M
3300017776	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 17 SPOT_SRF_2010-11-23	Environmental	Open in IMG/M
3300017779	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 18 SPOT_SRF_2010-12-16	Environmental	Open in IMG/M
3300017782	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 3 SPOT_SRF_2009-08-19	Environmental	Open in IMG/M
3300020388	Marine microbial communities from Tara Oceans - TARA_B100001063 (ERX555965-ERR599064)	Environmental	Open in IMG/M
3300020421	Marine microbial communities from Tara Oceans - TARA_B100000902 (ERX556005-ERR599007)	Environmental	Open in IMG/M
3300020440	Marine microbial communities from Tara Oceans - TARA_E500000178 (ERX555952-ERR599043)	Environmental	Open in IMG/M
3300020469	Marine microbial communities from Tara Oceans - TARA_B100001093 (ERX555967-ERR599052)	Environmental	Open in IMG/M
3300021365	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160316_1	Environmental	Open in IMG/M
3300024297	Seawater microbial communities from Monterey Bay, California, United States - 71D	Environmental	Open in IMG/M
3300024428	Seawater microbial communities from Monterey Bay, California, United States - 32D	Environmental	Open in IMG/M
3300025099	Marine viral communities from the Subarctic Pacific Ocean - 21_ETSP_OMZ_AT15319 metaG (SPAdes)	Environmental	Open in IMG/M
3300025120	Marine viral communities from the Pacific Ocean - LP-28 (SPAdes)	Environmental	Open in IMG/M
3300025137	Marine viral communities from the Pacific Ocean - LP-32 (SPAdes)	Environmental	Open in IMG/M
3300025138	Marine viral communities from the Pacific Ocean - LP-40 (SPAdes)	Environmental	Open in IMG/M
3300025168	Marine viral communities from the Pacific Ocean - LP-53 (SPAdes)	Environmental	Open in IMG/M
3300025626	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120531 (SPAdes)	Environmental	Open in IMG/M
3300025680	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110328 (SPAdes)	Environmental	Open in IMG/M
3300025821	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110421 (SPAdes)	Environmental	Open in IMG/M
3300025892	Pelagic Microbial community sample from North Sea - COGITO 998_met_01 (SPAdes)	Environmental	Open in IMG/M
3300028297	Seawater microbial communities from Monterey Bay, California, United States - 18D	Environmental	Open in IMG/M
3300028418	Seawater microbial communities from Monterey Bay, California, United States - 16D	Environmental	Open in IMG/M
3300031519	Sea-ice brine microbial communities from Beaufort Sea near Barrow, Alaska, United States - SB 0.2	Environmental	Open in IMG/M
3300031851	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 40m 21515	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI24003J15210_100125823	3300001460	Marine	MIGFIVAVFWFALVLLAIGTVLAFLTSWRDGCLGKDVAQIKTGLAWVFLRIKKFAHRK*
JGI24003J15210_100566311	3300001460	Marine	VIGFIIAVIYFALVLLAIGTVLALFTSWRDGCLGRDVAEIKTGLVGVYLRIKNFLHRKR*
Ga0065861_11801671	3300004448	Marine	MIGFLVALFWFALALLAMGTVLAFLTSWRDGCLGRDLAQIKTGLAWVFLRIKKIAHRK*
Ga0066224_11240082	3300004457	Marine	MIGFLVALFWFALALLAMGTVLAFLTSWREGCLGRDMREIKTGLAWVFLRIKKFTHRKK*
Ga0066223_10204022	3300004461	Marine	MIGFLVALFWFALALLAMGTVLAFLTSWRDGCLGRDLAQIKTGLAWVFLRIKKFTHRK*
Ga0066865_103021051	3300005523	Marine	MIGFIIALIYFALVLLAIGTTLAFLTSWRDGCLKKDIASVKSGLGWVFLR
Ga0098037_11457311	3300006737	Marine	MIGFIIALVYFALVLFAIGTILAFLTSWRDGCLHKDVAQIKSGLVWAYLRIKKFAQ
Ga0115566_103440902	3300009071	Pelagic Marine	MIGFIVAVFWFALVLLAIGTVLAFLTSWRDGCLGKDLRELKTGLVGVYLRIKNFAHRK
Ga0115546_10288125	3300009435	Pelagic Marine	MIGFIVAVFWFALVLLAIGTVLAFLTSWRDGCLGRDVAEIKTGLAWLYLRIKNFLHRKR*
Ga0115556_10205965	3300009437	Pelagic Marine	MMGFIVAVFWFALVLLATGTVLALLTSWRDGCLGRDVAEIKTGLAWLYLRIKNFLHRKR*
Ga0115561_12358461	3300009440	Pelagic Marine	MIGFIVAVSWFALVLLAIGTVPAFFTSWRDGCLQRDIASVKTGLGWVFLRIKNFAQQIFNRTVYLHV
Ga0115557_11407882	3300009443	Pelagic Marine	MMGFITALFWFALALLAIGTALAFFTSWRDGCLGRDIAQIKTGLGWVFLRIKNFAHRK*
Ga0115557_14006983	3300009443	Pelagic Marine	MIGFIVAVFWFALALLAIGTALASFTSWRDGCLGWVFLRIKNFAQQIFNRTVYI
Ga0115560_13012031	3300009447	Pelagic Marine	MIGFIVAVFWFALVLLATGTVLAFLTSWRDGCLGRDVAEIKTGLAWLYLRIKNFLHRKR*
Ga0115555_10200635	3300009476	Pelagic Marine	MMGFIVAVFWFALVLLATGTVLAFLTSWRDGCLGRDVAEIRTGLAWLYLRIKNFLHRKR*
Ga0115571_11386054	3300009495	Pelagic Marine	MMGFITALFWFALALLAIGTALAFFTSWRDGCLGRDIAQIKTGLGWVF
Ga0115571_13465941	3300009495	Pelagic Marine	MIGFIVAVFWFALALLAIGTALAFFTSWRDGCLGRDIAQIKTGLGWVF
Ga0115571_13889222	3300009495	Pelagic Marine	MGFIVAVFWFALVLLATGTVLALLTSWRDGCLGRDVAEIKTGLAWLYLRIKNFLHRKR*
Ga0115564_102021871	3300009505	Pelagic Marine	MIGFIVAVFWFALALLAIGTALAFFTSWRDGCLGRDIAQIKTGLAWVFLRIKKFTHRKK*
Ga0115564_102946102	3300009505	Pelagic Marine	MMGFIVAVFWFALVLLATGTVLAFLTSWRDGCLGRDVAEIKTGLAWLYLRIKNFLHRKR*
Ga0115567_103396543	3300009508	Pelagic Marine	MIGFIVAVFWFALALLAIGTALAFFTSWRDGCLGRDIAQIKTGLGWVFLRIKNFA
Ga0115567_107295682	3300009508	Pelagic Marine	MMGFITALFWFALALLAIGTALAFFTSWRDGCLGRDIAQIKTGLGWVFLRIKNF
Ga0115011_101579911	3300009593	Marine	MIGFIVAFIYFALVILAIGTTIAFFTSWRDGCLQRDIDSVKSGLGWVFLRIKKFAQVIFNRTVY
Ga0098059_10955952	3300010153	Marine	MIGFITALVYFALVLLAIGTILAFLTSWRDGCLGKDVASVKSGLGWVYLRIKKFAQQKIKR*
Ga0163179_100634622	3300012953	Seawater	MIGFITALAYFILFTFAIGTALAFFTSWRDGCLHRDMAQIKTGLAWVYHRLQKFTRGKK*
Ga0181377_10088663	3300017706	Marine	MIGFIVALFYFALVLLAIGTALAFFTSWRDGCLGKDIASIKTGLGWVYLKIKKIAHGKNK
Ga0181369_10060322	3300017708	Marine	MMGFIMALMYFALVLLAVGTTLAFFTSWRDGCLHKDVAQIKTGLGWVFLRIKKFAQRK
Ga0181387_10009712	3300017709	Seawater	MMGFIIALVYFALVLLAIGTTLALFTSWRDGCLGKDIASVKTGLAWVYHRLQKFTRGKK
Ga0181387_10232662	3300017709	Seawater	MIGFIIALIYFALVLLAIGTILAFLTSWRDGCLGKDVAQIKSGLVWVYLRIKKFAQQKNT
Ga0181387_10233022	3300017709	Seawater	MIGFITALVYFALVLLAIGTILAFLTSWRDGCLHKDVAQIKSGLAWVYLRIKKFAQQKNT
Ga0181387_10642542	3300017709	Seawater	MMGFITALVYFALVLLAIGTTLALFTSWRDGCLGKDLAQIKTGLAWVYHRLQKFTRGKK
Ga0181403_10562971	3300017710	Seawater	MGFITALVYFALALLAIGTTLAFLTSWRDGCLGKDVAQIKSGLVWVYLRIKKFAQQKNTD
Ga0181403_11246541	3300017710	Seawater	MIGFIIALVYFALVLLAIGTILAFLTSWRDGCLHKDVAQIKSGLVWVYLRIKKFAQQKNT
Ga0181391_10313311	3300017713	Seawater	MGFITALVYFALALLAIGTTLAFLTSWRDGCLGKDVAQIKSGLVWVYLRIKKFAQQKNK
Ga0181391_10529112	3300017713	Seawater	MMGFIVALFWFALVLLAIGTALAFLTSWRDGCLGKDIAQIKSGLVWVYLRIKKFAHRKNK
Ga0181391_10930833	3300017713	Seawater	MMGFIIALVYFALVLLAIGTTLALFTSWRDGCLGKDIASVKTGLAWVYHRLQKFTRGKR
Ga0181391_10990281	3300017713	Seawater	MIGFIIALIYFALVLLAIGTTLAFLTSWRDGCLGKDVASVKSGLVWVYLRIKKFAQQKNT
Ga0181412_11563122	3300017714	Seawater	MIGFITALVYFALVLLAIGTILAFLTSWRDGCLHKDVAQIKSGLVWVYLRIKKFAQQKNT
Ga0181404_10367531	3300017717	Seawater	MMGFITALVYFALVLLAIGTTLALFTSWRDGCLGKDLAQIKTGLAWVYHRLQKFTR
Ga0181404_11369583	3300017717	Seawater	MGFIVALFWFALVLLAIGTALAFLTSWRDGCLGKDVAQIKSGLVWVYLRIKNFAHRK
Ga0181390_10581652	3300017719	Seawater	MIGFITALVYFALVLLAVGTTLAFLTSWRDGCSGGVIASDKSGLVWVYLSIKK
Ga0181390_10956392	3300017719	Seawater	MIGFIIAVIYFALVLLAIGTVLALFTSWRDGCLGKDLAQIKSGLGWVYLRIKKFAQQKIK
Ga0181390_10999561	3300017719	Seawater	WAYTRNIRHMIGFITALVYFALVLLAVGTTLAFLTSWRDGCLGKDVAQIKSGLGWVYLRIKKFAQQKNTD
Ga0181390_11073511	3300017719	Seawater	MIGFITALIYFALVLLAIGTILAFLTSWRDGCLGKDVASVKSGLVWVYLRIKK
Ga0181390_11372722	3300017719	Seawater	MIGFIIALIYFALVLLAIGTILAFLTSWRDGCLHKDVAQIKSGLVWVYLRIKKFAQQKNT
Ga0181390_11749691	3300017719	Seawater	MIGFIIALIYFALVLLAIGTTLALLTSWRDGCLGKDVASVKSGLVWVYLRIKKFAQQKNT
Ga0181383_100152214	3300017720	Seawater	MMGFIVALFWFALVLLAIGTALAFLTSWRDGCLGKDIAQIKTGLVWVFLRIKKFTRGKK
Ga0181383_10692482	3300017720	Seawater	MIGFIVALIWFALVLLAIGTALAFLTSWRDGCLGKDIAQIKSGLVWVYLRIKNFAHRK
Ga0181373_10059165	3300017721	Marine	MMGFIMALMYFALVLLAVGTTLALFTSWRDGCLHKDVAQIKTGLGWVFLRIKKFAQRK
Ga0181388_10434631	3300017724	Seawater	MIGFIIALIYFALVLLAIGTILAFLTSWRDGCLGKDVASVKSGLVWVYLRIKKFAQQKN
Ga0181388_10558811	3300017724	Seawater	QPGAGQVTWDIDHMIGFIVAVFWFALVLLAIGTVLAFLTSWRDGCLGKDVAEIKTGLAWVFLRIKKFAHRK
Ga0181388_10841441	3300017724	Seawater	MIGFITALVYFALVLLAIGTILAFLTSWRDGCLHKDVAQIKSGLGWVYLRIKKFAQQKNT
Ga0181398_10926772	3300017725	Seawater	MIGFITALIYFALVLLAIGTILAFLTSWRDGCLGKDVASVKSGLVWVYLRIKKFAQQKNT
Ga0181398_11407201	3300017725	Seawater	MMGFIVALFWFALVLLAIGTALAFLTSWRDGCLGKDLAQIKTGLAWVHHRLQKFTRGKK
Ga0181398_11547701	3300017725	Seawater	MIGFITALVYFALVLLAVGTILAFLTSWRDGCLGKDIASVKSGLVWVYLRIKKFAQQKNT
Ga0181381_10630111	3300017726	Seawater	MMGFIVALFWFALVLLAIGTALAFLTSWRDGCLGKDIAQIKTGLVWVYHRLQKFTRGKK
Ga0181419_10438622	3300017728	Seawater	MIGFITALIYFALVLLAIGTILAFLTSWRDGCLHKDVAQIKSGLVWVYLRIKKFAQQK
Ga0181419_10523912	3300017728	Seawater	MIGFIIALIYFALVLLAVGTILAFLTSWRDGCLHKDVAQIKSGLVWVYLRIKKFAQQK
Ga0181419_11757952	3300017728	Seawater	ILKCYCYRFNTRQDTWNIRHMIGFITALVYFALVLLAIGTILAFLTSWRDGCLHKDVAQIKSGLAWVYLRIKKFAQQKNTD
Ga0181396_11402671	3300017729	Seawater	MGFIIAVIYFALVLLAIGTVLPLFTSWRDGCLGRDVAEIKTGLVGVYLRIK
Ga0181417_10331733	3300017730	Seawater	MIGFITALVYFALVLLAIGTILAFLTSWRDGCLGKDVAQIKSGLVWVYLRIKKFAQQKNT
Ga0181417_10819892	3300017730	Seawater	MMGFIVALFWFALVLLAIGTALALFTSWRDGCLGKDIAQIKTGLVWVFLRIKKFTRGKK
Ga0187222_10513631	3300017734	Seawater	MIGFIVAVFWFALVLLAIGTALAFLTSWRDGCLGKDIAQIKTGLVWVYHRLQKFTRGKK
Ga0181431_10326881	3300017735	Seawater	ALVYFALVLLAIGTILAFLTSWRDGCLGKDVAQIKSGLVWVYLRIKKFAQQKNTD
Ga0187218_11616262	3300017737	Seawater	MIGFIIAVIYFALVLLAIGTTLALFTSWRDGCLGKDIASVKTGLAWVYH
Ga0181428_11377741	3300017738	Seawater	MIGFIVAVFWFALVLLAIGTVLAFLTSWRDGCLGRDIAQIKTGLAWVFLRIKK
Ga0181433_11496591	3300017739	Seawater	MIGFIIALIYFALVLLAVGTILAFLTSWRDGCLGKDVAQIKSGLVWVYLRIKKFAQQKNT
Ga0181418_10477361	3300017740	Seawater	WAYTRNINHMIGFITALIYFALVLLAIGTILAFLTSWRDGCLGKDVAQIKSGLVWVYLRIKKFAQQKNTD
Ga0181418_10740092	3300017740	Seawater	MIGFIVAVIYFALVLLAFGTVIAFYTSWRDGCLQRDIASVKTGLGWVFLKIKKFAHRIFS
Ga0181402_10106253	3300017743	Seawater	MGFITALVYFALALLAIGTTLAFLTSWRDGCLGKDVAQIKSGLVWVYLRIKKFAQQKIKK
Ga0181397_10081871	3300017744	Seawater	IAVIYFALVLLAIGTVLALFTSWRDGCLGRDVAEIKTGLVGVYLRIKNFLHRKR
Ga0181397_10735592	3300017744	Seawater	MIGFITALVYFALVLLAIGTILAFLTSWRDGCLGKDVASVKSGLVWVYLRIKKFAQQK
Ga0181397_11887292	3300017744	Seawater	MIGFIIALIYFALVLLAVGTILAFLTSWRDGCLGKDVASVKSGLVWVYLRIKKFAQQK
Ga0181427_10426141	3300017745	Seawater	GFITALVYFALVLLAIGTILAFLTSWRDGCLHKDVAQIKSGLAWVYLRIKKFAQQKNTD
Ga0181427_10679591	3300017745	Seawater	MIGFITALIYFALVLLAIGTILAFLTSWRDGCLGKDIASVKSGLVWVYLRIKKFAQQKNT
Ga0181427_10793402	3300017745	Seawater	MIGFITALVYFALVLLAIGTTLALLTSWRDGCLGKDVASVKSGLVWVYLRIKKFAQQKNT
Ga0181427_11471301	3300017745	Seawater	MIGFIIALIYFALVLLAIGTTLAFLTSWRDGCLHKDVAQIKSGLVWVYLRIKKFAQQKNT
Ga0181393_10009303	3300017748	Seawater	VIGFIIAVIYFALVLLAIGTVLALFTSWRDGCLGRDVAEIKTGLVGVYLRIKNFLHRKT
Ga0181393_11243631	3300017748	Seawater	MIGFIVALIWFALVLLAIGTALAFLTSWRDGCLGKDIAQIKTGLAWVYLRIKNFAHRR
Ga0181393_11602212	3300017748	Seawater	MMGFITALVYFALVLLAIGTTLALFTSWRDGCLGKDLAQIKMGLAWVYHRLQKFTRGKK
Ga0181392_10481392	3300017749	Seawater	MIGFITALVYFALVLLAIGTILAFLTSWRDGCLGKDVAQIKSGLGWVYLRIKKFAQQKNK
Ga0181392_10995622	3300017749	Seawater	MIGFITALIYFALVLLAIGTTLALLTSWRDGCLGKDVASVKSGLVWVYLRIKKFAQQKNT
Ga0181392_11947691	3300017749	Seawater	MIGFITALVYFALVLLAVGTILAFLTSWRDGCLGKDVASVKSGLVWVYLRIKKFAQQK
Ga0181392_11993282	3300017749	Seawater	MIGFIVALFWFALVLLAIGTALAFLTSWRDGCLGKDIAQIKTGLAWVFLRIKKFSHRK
Ga0181405_10984241	3300017750	Seawater	HMIGFITALVYFALVLLAIGTILAFLTSWRDGCLHKDVAQIKSGLVWVYLRIKKFAQQKNTD
Ga0181405_10990222	3300017750	Seawater	MIGFLVAVFWFALVLLAIGTVLAFLTSWRDGCLGKDIAQIKTGLAWVFLRIKKFAHRK
Ga0181405_11223042	3300017750	Seawater	MIGFITALIYFALVLLAIGTILALLTSWRDGCLGKDVASVKSGLVWVYLRIKKFAQQKNT
Ga0181405_11499961	3300017750	Seawater	MIGFIIALIYFALVLLAIGTTLAFLTSWRDGCLGKDIASVKSGLVWVYLRIKKFAQQKNT
Ga0187219_11910371	3300017751	Seawater	MIGFITALVYFALVLLAVGTILAFLTSWRDGCLGKDIASVKSGLGWVYLRIKKFAQQKNT
Ga0181407_10613783	3300017753	Seawater	SIHTWTHTRDIHMIGFIVALFWFALVLLAIGTVLAFLTSWRDGCLGKDVAQIKSGLVWVYLRIKNFAHRKNK
Ga0181407_11289821	3300017753	Seawater	PVTWDIDHMIGFLVAVFWFALVLLAIGTVLAFLTSWRDGCLGKDVAQIKTGLAWVFLRIKKFAHRK
Ga0181411_12019201	3300017755	Seawater	MGFITALVYFALALLAIGTTLAFLTSWRDGCLGKDVAQIKSGLVWVYLRIKKFAQQKN
Ga0181382_10450943	3300017756	Seawater	MIGFIVALFWFALVLLAIGTVLAFLTSWRDGCLGKDVAQIKSGLVWVYLRIKNFAHRK
Ga0181382_10699032	3300017756	Seawater	MIGFIIALVYFALVLLAIGTILAFLTSWRDGCLGKDVASVKSGLVWVYLRIK
Ga0181382_11123521	3300017756	Seawater	MGFITALVYFALALLAIGTTLAFLTSWRDGCLGKDVAQIKSGLVWMYLRIKKFAQQK
Ga0181420_11026752	3300017757	Seawater	MMGFIVALFWFALVLLAIGTALAFLTSWRDGCLGKDVAQIKSGLVWVYLRIKNFAHRKNK
Ga0181409_10605952	3300017758	Seawater	MIGFITALVYFALVLLAVGTILAFLTSWRDGCLGKDVAQIKSGLGWVYLRIK
Ga0181409_11251451	3300017758	Seawater	MGFITALVYFALALLAIGTTLAFLTSWRDGCLGKDVAQIKSGLVWVYLRIKKFAQQKIKR
Ga0181414_11897422	3300017759	Seawater	MIGFIVALFWFALVLLAIGTVLAFLTSWRDGCLGKDVAQIKSGLVWVYLRIKNFAHRKNK
Ga0181408_100072615	3300017760	Seawater	VIGFIIAVIYFALVLLAIGTVLALFTSWRDGCLGRDVAEIKTGLVGVYLRIKNFLHRKR
Ga0181408_11517432	3300017760	Seawater	MIGFIVALFWFALVLLAIGTVLAFLTSWRDGCLGKDIAQIKTGLVWVFLRIKKFTRGKK
Ga0181422_11274091	3300017762	Seawater	MIGFIIALVYFALVLLAIGTILAFLTSWRDGCLGKDVAQIKSGLVWVYLRIKKFAQQKNT
Ga0181422_12024761	3300017762	Seawater	MIGFIIALVYFALVLLAIGTILAFLTSWRDGCLGKDVASVKSGLVWVYLRIKKFAQQKNT
Ga0181410_11927201	3300017763	Seawater	MIGFITALVYFALVLLAIGTILAFLTSWRDGCLHKDVAQIKSGLAWVY
Ga0181406_10582662	3300017767	Seawater	MIGFITALVYFALVLLAIGTILAFLTSWRDGCLGKDIASVKSGLVWVYLRIKKFAQQKNT
Ga0187220_12098011	3300017768	Seawater	MMGFIVALFWFALVLLAVGTTLALFTSWRDGCLGRDVAEIKTGLVGVYLRIKNF
Ga0187220_12630012	3300017768	Seawater	MIGFIVALFWFALVLLAIGTALAFLTSWRDGCLGKDIAQIKTGLVWVFLRIKKFTRGKK
Ga0187217_11694493	3300017770	Seawater	MIGFIVALFWFALVLLAIGTALAFLTSWRDGCLGKDIAQIKTGLAWVFLRIKKFAHRK
Ga0187217_12851532	3300017770	Seawater	MIGFITALIYFALVLLAIGTTLALLTSWRDGCLGKDVASVKSGLGWVYLRIKKFAQQKNT
Ga0181425_11098522	3300017771	Seawater	MMGFIVALFWFALVLLAIGTVLAFLTSWRDGCLGKDIAQIKTGLVWVYHRLQKFTRGKK
Ga0181386_10986891	3300017773	Seawater	MIGFIIALIYFALVLLAVGTILAFLTSWRDGCLGKDIASVKSGLVWVYLRIKKFAQQKNT
Ga0181394_10741072	3300017776	Seawater	MIGFITALIYFALVLLAIGTILAFLTSWRDGCLHKDVAQIKSGLVWVYLRIKKFAQQKNT
Ga0181394_11115492	3300017776	Seawater	MIGFITALVYFALVLLAIGTILAFLTSWRDGCLHKDVAQIKSGLAWVYLRIKKFAQQKN
Ga0181395_10406023	3300017779	Seawater	YFALVLLAIGTILAFLTSWRDGCLGKDVASVKSGLVWVYLRIKKFAQQKNTD
Ga0181380_12395722	3300017782	Seawater	VIGFIIAVIYFALVLLAIGTVLALFTSWRDGCLGRDVAEIKTGLVGVYL
Ga0181380_13247361	3300017782	Seawater	MIGFITALIYFALVLLAVGTTLAFLTSWRDGCLGKDVAQIKSGLGWVYLRIKK
Ga0211678_103964141	3300020388	Marine	MMGFITALVYFALVLLAIGTALALFTSWRDGCLGKDIASVKTGLAWVYLRIKKFAQQKNK
Ga0211653_100045352	3300020421	Marine	MIGFITAVIYFALVLLAIGTLLALFTSWRDGCLGKDIASVKTGLGWVFLKIKKFAQRK
Ga0211518_105076081	3300020440	Marine	MMGFITALVWFALALLAMGTVLAFLTSWRDGCLHRDLAQIKTGLAWVYLRIKKFAQQKFR
Ga0211577_105973092	3300020469	Marine	MIGFIIALIYFALVLLAIGTILAFLTSWRDGCLGKDVASVKSGLVWVYLRIKKFAQQKNT
Ga0206123_102943241	3300021365	Seawater	MIGFIVAVFWFALALLAIGTALAFFTSWRDGCLGRDIAQIKTGLGWVFL
Ga0228658_11220031	3300024297	Seawater	NINHMIGFIIALIYFALVLLAIGTILAFLTSWRDGCLGKDVASVKSGLVWVYLRIKKFAQQKNTD
Ga0233396_11505241	3300024428	Seawater	NINHMIGFITALVYFALVLLAIGTILAFLTSWRDGCLGKDVASVKSGLVWVYLRIKKFAQQKNTD
Ga0208669_10405421	3300025099	Marine	MIGFITALIYFALVLLAIGTALAFLTSWRDGCLKKDVASVKSGLGWVYLRIKKFAQQKIK
Ga0209535_10285401	3300025120	Marine	DIHMMGFIVALFWFALVLLAIGTALAFLTSWRDGCLGKDIAQIKSGLVWVYLRIKKFAHRKNK
Ga0209535_10530093	3300025120	Marine	MIGFIVAVFWFALVLLAIGTVLAFLTSWRDGCLGKDIAQIKTGLAWVFLRIKKFAHRK
Ga0209535_10682221	3300025120	Marine	LVYFALVLLAIGTTLALFTSWRDGCLGKDLAQIKTGLAWVYHRLQKFTRGKK
Ga0209535_10907391	3300025120	Marine	MMGFIVALVYFALVLLAIGTVLAFLTSWRDGCLGKDVAQIKSGLVWVFLRIKKFAQQKIK
Ga0209336_100023563	3300025137	Marine	MIGFIVAVFWFALVLLAIGTVLAFLTSWRDGCLGKDVAQIKTGLAWVFLRIKKFAHRK
Ga0209634_12574381	3300025138	Marine	MISFIVVVFWFALVLLAIGTALAFLTSWRDGCLGKDVAEIKTGLGWVFLKIKNFAHRIFS
Ga0209337_11154221	3300025168	Marine	MIGFIVALFWFALVLLAIGTVLAFLTSWRDGCLGKDVAEIKSGLVWVYLRIKKFAQRKNT
Ga0209716_11126892	3300025626	Pelagic Marine	MMGFIVAVFWFALVLLATGTVLALLTSWRDGCLGRDVAEIKTGLAWLYLRIKNFLHRKR
Ga0209306_11981292	3300025680	Pelagic Marine	MIGFIVAVFWFALALLAIGTALAFFTSWRDGCLGRDIAQIKTGLGWVFLRIKNFAH
Ga0209600_11639911	3300025821	Pelagic Marine	MIGFIVAVFWFALVLLAIGTVLAFLTSWRDGCLGRDVAEIRTGLTWLYLRIKKFA
Ga0209630_100949223	3300025892	Pelagic Marine	MMGFIVAVFWFALVLLATGTVLAFLTSWRDGCLGRDVAEIKTGLAWLYLRIKNFLHRKR
Ga0228617_11048901	3300028297	Seawater	MIGFITALIYFALVLLAIGTILAFLTSWRDGCLGKDVAQIKSGLVWVYLRIKKFAQQKNT
Ga0228615_10888721	3300028418	Seawater	MIGFIIALIYFALVLLAIGTILAFLTSWRDGCLGKDIASVKSGLVWVYLRIKKFAQQKNT
Ga0307488_104340102	3300031519	Sackhole Brine	MMGFILALFWFALVLLAIGTVLAFLTSWRDGCLHRDIAQIKSGLAWVYLRIKNFAHRKK
Ga0307488_107318701	3300031519	Sackhole Brine	VIGFIIAVIYFALVLLAIGTVLALFTSWRDGCLGRDVAEIKTGLVGVYLRIKNFLHRK
Ga0315320_105582471	3300031851	Seawater	MIGFITALIYFALVLLAIGTILAFLTSWRDGCLGKDVAQIKSGLGWVYLRIKKFAQQKNT

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F053972

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences