Metagenome Family F053944

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F053944
Family Type	Metagenome
Number of Sequences	140
Average Sequence Length	70 residues
Representative Sequence	MAPTYRMPDPQRRCDEATTAEIHDALSAARCSAELAGMATEEFVVRELLLTVIQQIDRAAAAARRLS
Number of Associated Samples	92
Number of Associated Scaffolds	140

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	17.95 %
% of genes near scaffold ends (potentially truncated)	6.43 %
% of genes from short scaffolds (< 2000 bps)	12.14 %
Associated GOLD sequencing projects	78
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.74

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (72.857 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (45.000 % of family members)
Environment Ontology (ENVO)	Unclassified (80.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (81.429 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 56.84% β-sheet: 0.00% Coil/Unstructured: 43.16%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.74
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.74
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
a.25.1.0: automated matches	d6sv1a1	6sv1	0.88
a.25.1.1: Ferritin	d1nfva_	1nfv	0.87269
a.25.1.1: Ferritin	d2fzfa1	2fzf	0.86299
a.29.6.0: automated matches	d1xg2b1	1xg2	0.86189
a.266.1.2: Indoleamine 2,3-dioxygenase-like	d2nwba1	2nwb	0.85249

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 140 Family Scaffolds
PF03706	LPG_synthase_TM	17.86
PF01522	Polysacc_deac_1	12.14
PF01435	Peptidase_M48	12.14
PF01553	Acyltransferase	9.29
PF01951	Archease	5.00
PF04011	LemA	3.57
PF13411	MerR_1	3.57
PF00072	Response_reg	2.86
PF01966	HD	1.43
PF01139	RtcB	1.43
PF00313	CSD	0.71
PF13460	NAD_binding_10	0.71
PF14684	Tricorn_C1	0.71
PF00990	GGDEF	0.71
PF13439	Glyco_transf_4	0.71

COG ID	Name	Functional Category	% Frequency in 140 Family Scaffolds
COG0392	Predicted membrane flippase AglD2/YbhN, UPF0104 family	Cell wall/membrane/envelope biogenesis [M]	17.86
COG0726	Peptidoglycan/xylan/chitin deacetylase, PgdA/NodB/CDA1 family	Cell wall/membrane/envelope biogenesis [M]	12.14
COG1371	Archease, activates RNA ligation by RtcB (tRNA splicing)	Translation, ribosomal structure and biogenesis [J]	5.00
COG1704	Magnetosome formation protein MamQ, lipoprotein antigen LemA family	Cell wall/membrane/envelope biogenesis [M]	3.57
COG1690	RNA-splicing ligase RtcB, repairs tRNA damage	Translation, ribosomal structure and biogenesis [J]	1.43

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.86 %
All Organisms	root	All Organisms	27.14 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.86 %
cellular organisms	root	All Organisms → cellular organisms	27.14 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.86 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	27.14 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.86 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	12.86 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.86 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	12.86 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.86 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	12.86 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.71 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002558\|JGI25385J37094_10003098	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	5660	Open in IMG/M
3300005166\|Ga0066674_10000446	All Organisms → cellular organisms → Bacteria	12500	Open in IMG/M
3300005167\|Ga0066672_10063056	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2167	Open in IMG/M
3300005174\|Ga0066680_10015674	All Organisms → cellular organisms → Bacteria	4027	Open in IMG/M
3300005176\|Ga0066679_10074704	All Organisms → cellular organisms → Bacteria	2011	Open in IMG/M
3300005178\|Ga0066688_10055854	All Organisms → cellular organisms → Bacteria	2299	Open in IMG/M
3300005186\|Ga0066676_10922809	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	585	Open in IMG/M
3300005187\|Ga0066675_11065055	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	605	Open in IMG/M
3300005556\|Ga0066707_10015327	All Organisms → cellular organisms → Bacteria	3925	Open in IMG/M
3300006797\|Ga0066659_10257806	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1309	Open in IMG/M
3300009012\|Ga0066710_101070321	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1246	Open in IMG/M
3300009012\|Ga0066710_102386638	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	767	Open in IMG/M
3300009137\|Ga0066709_100113430	All Organisms → cellular organisms → Bacteria	3363	Open in IMG/M
3300009137\|Ga0066709_102572150	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	683	Open in IMG/M
3300010325\|Ga0134064_10316870	Not Available	599	Open in IMG/M
3300010335\|Ga0134063_10019223	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2809	Open in IMG/M
3300010336\|Ga0134071_10032668	All Organisms → cellular organisms → Bacteria	2281	Open in IMG/M
3300012199\|Ga0137383_10083950	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2304	Open in IMG/M
3300012200\|Ga0137382_10009302	All Organisms → cellular organisms → Bacteria	5148	Open in IMG/M
3300012203\|Ga0137399_10000187	All Organisms → cellular organisms → Bacteria	22616	Open in IMG/M
3300012203\|Ga0137399_11257226	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	623	Open in IMG/M
3300012918\|Ga0137396_10000035	All Organisms → cellular organisms → Bacteria	44132	Open in IMG/M
3300015358\|Ga0134089_10223504	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	763	Open in IMG/M
3300017656\|Ga0134112_10007265	All Organisms → cellular organisms → Bacteria	3579	Open in IMG/M
3300018431\|Ga0066655_10001311	All Organisms → cellular organisms → Bacteria	8903	Open in IMG/M
3300018468\|Ga0066662_10177212	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1653	Open in IMG/M
3300025289\|Ga0209002_10397569	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	784	Open in IMG/M
3300025318\|Ga0209519_10359698	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	837	Open in IMG/M
3300025319\|Ga0209520_10242753	All Organisms → cellular organisms → Bacteria	1121	Open in IMG/M
3300026301\|Ga0209238_1144378	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	741	Open in IMG/M
3300026305\|Ga0209688_1066819	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	648	Open in IMG/M
3300026306\|Ga0209468_1009681	All Organisms → cellular organisms → Bacteria	3598	Open in IMG/M
3300026309\|Ga0209055_1000090	All Organisms → cellular organisms → Bacteria	58099	Open in IMG/M
3300026317\|Ga0209154_1149250	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	971	Open in IMG/M
3300026326\|Ga0209801_1001265	All Organisms → cellular organisms → Bacteria	15740	Open in IMG/M
3300026524\|Ga0209690_1000318	All Organisms → cellular organisms → Bacteria	25415	Open in IMG/M
3300026548\|Ga0209161_10001645	All Organisms → cellular organisms → Bacteria	18506	Open in IMG/M
3300027748\|Ga0209689_1389665	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	533	Open in IMG/M
3300028536\|Ga0137415_10000484	All Organisms → cellular organisms → Bacteria	37934	Open in IMG/M

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	98.57%
Loam	Environmental → Terrestrial → Soil → Loam	1.43%

Habitat	Taxonomy	Distribution
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	69.29%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	29.29%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.43%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	45.00%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	24.29%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	16.43%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	10.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.14%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.43%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm	Environmental	Open in IMG/M
3300002561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm	Environmental	Open in IMG/M
3300002562	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002911	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm	Environmental	Open in IMG/M
3300002916	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005566	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142	Environmental	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010321	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015	Environmental	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300017654	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300017657	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300025289	Soil microbial communities from Rifle, Colorado, USA - sediment 16ft 2	Environmental	Open in IMG/M
3300025318	Soil microbial communities from Rifle, Colorado, USA - sediment 13ft 1	Environmental	Open in IMG/M
3300025319	Soil microbial communities from Rifle, Colorado, USA - sediment 16ft 1	Environmental	Open in IMG/M
3300026277	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026296	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026298	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026300	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026305	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142 (SPAdes)	Environmental	Open in IMG/M
3300026306	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102 (SPAdes)	Environmental	Open in IMG/M
3300026307	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123 (SPAdes)	Environmental	Open in IMG/M
3300026308	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103 (SPAdes)	Environmental	Open in IMG/M
3300026309	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)	Environmental	Open in IMG/M
3300026314	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143 (SPAdes)	Environmental	Open in IMG/M
3300026315	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126 (SPAdes)	Environmental	Open in IMG/M
3300026317	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)	Environmental	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300026326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)	Environmental	Open in IMG/M
3300026328	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)	Environmental	Open in IMG/M
3300026329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131 (SPAdes)	Environmental	Open in IMG/M
3300026342	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146 (SPAdes)	Environmental	Open in IMG/M
3300026343	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144 (SPAdes)	Environmental	Open in IMG/M
3300026524	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150 (SPAdes)	Environmental	Open in IMG/M
3300026529	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300027643	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25385J37094_1000020214	3300002558	Grasslands Soil	VLADRRALLASRLMAPTYRMPHPLGLWAQATVAEITDALHAARCAAELAGMETEGFVTRELLLTVVQQIDRATSAVRRLPATASRRDML*
JGI25385J37094_100030983	3300002558	Grasslands Soil	LRAQALPSLRPVSPTYKMPDVTALRRAAIVAEANNALCAARCSAQLAGLETREFVVRELLLTVMEQIDRAATAVRQLH*
JGI25385J37094_100105112	3300002558	Grasslands Soil	MAPTYRMPNPLRLRAQATVAEIHDALCAARCSAELAGMXTDEFVVRELLLAVVAQIDRAATAVRCL*
JGI25385J37094_101858671	3300002558	Grasslands Soil	GRCRLLLFEIMTPTYRMPNPQGLCDEATAAEIRDALGAARCSAHLAGMATEEFVVRELLLTVIQQIDRAAAAARRLS*
JGI25384J37096_100029786	3300002561	Grasslands Soil	MAPTYRMPNPLRLRAQATVAEIHDALCAARCSAELAGMETDEFVVRELLLAVVAQIDRAATAVRCL*
JGI25384J37096_102015441	3300002561	Grasslands Soil	MPDPRRLCDEATAAEIHDALSAARCSAELAGTQTDEFTVRELLLAVIQQVDRAAAAARRLS*
JGI25382J37095_100273392	3300002562	Grasslands Soil	MPHPLGLWAQATMAEITDALHAARCAAELAGMETEEFVIRELLLTVVQQIDRATSAVRRLPTTASRWDMV*
JGI25390J43892_100037214	3300002911	Grasslands Soil	CRLLLFEIMTPTYRMPNPQGLCDEATAAEIRDALGAARCSAHLAGMATEEFVVRELLLTVIQQIDRAAAAARRLS*
JGI25389J43894_10713662	3300002916	Grasslands Soil	MAPMHRMPRPSGLWAQATVAEVNDALHAARCSAQLAGMATEEFVVRELLLTVIQQIDRAVTAARRLHPPS*
Ga0066674_1000044612	3300005166	Soil	VSPTYKMPDVTALRRAAIVAEANNALCAARCSAQLAGLETREFVVRELLLTVMEQIDRAATAVRQLH*
Ga0066674_1000153510	3300005166	Soil	MAPTYRMPTPQRLRSQATVAEIHDALCAARCSAELAGMETDEFVVRELLLAVVAQIDRAATAVRRLSAPS*
Ga0066674_100188452	3300005166	Soil	MAPTYRMPNPQRLRSEATVAEIHDALCAARCSAELAGMETDEFVVRELLLAIVAQIDRAATALRRLSSTS*
Ga0066674_100413491	3300005166	Soil	MTPTYRMPNPQRLYDEATAADLRNALSAARCSAELAGMQTDEFVVRELLLTVIQQIDRATAAAR
Ga0066672_100033294	3300005167	Soil	MAPTYRMPSPQRRRDEAAVAELCDALCAARCSAELAGTQTKEFVVRELLLAVIQQIDQAAAAARRLS*
Ga0066672_100630563	3300005167	Soil	MPDPQRRCDEATTAEIHDALSAARCSAELAGAETEEFIVRELLLTVIQQIDRAAAAARRLS*
Ga0066672_103494592	3300005167	Soil	MPNPQGLCDEATAAEIRDALGAARCSAHLAGMATEEFVVRELLVTVIQQIDRAAAAARRLS*
Ga0066672_107251772	3300005167	Soil	MAPMHRMPRPPGLWAQAALAEINDALDAARCSAELAGIATEEFVVRELLLAVIQQIDRAAAVARRSVTLSRDVVS*
Ga0066683_100433643	3300005172	Soil	MHRMPRPPGLWAQAALAEINDALDAARCSAELAGIATEEFVVRELLLVVIQQINRAAAVARRSVTSFRDVVP*
Ga0066680_100156743	3300005174	Soil	MPDPQRRCDEATTAEIHDALSAARCSAELAGTETEEFIVRELLLTVIQQIDRAAAAARRLS*
Ga0066673_103588092	3300005175	Soil	MHRMPRPPGRWAQATVAELNDALDAARCSAELAGMATEEFVVRELLLAVIQQIDRAAAAARRLS*
Ga0066679_100362502	3300005176	Soil	MAPMHRMPRPSGLWAQATVAEIIEALDGARCSAELAGMATEEFVVRELLLTVIQQVDRAVTAARRLLPPS*
Ga0066679_100747041	3300005176	Soil	MPDPHRRCDEATTAEIHDALSAARCSAELAGAETEEFIVRELLLTVIQQIDRAAAAARRLS*
Ga0066688_100558542	3300005178	Soil	MPDPHRRCDEATTAEIHDALSAARCSAELAGTETEEFIVRELLLTVIQQIDRAAAAARRLS*
Ga0066684_102333702	3300005179	Soil	MAPMHRMPRPPGLWAEAALAEINDALDAARCSAELAGIATEDFVVRELLLAVIQQIDRAAAVARRSVTLSRDVVS*
Ga0066685_100917171	3300005180	Soil	MAPMHRMPRPPGLWAQAALAEINDALDAARCSAELAGIATEEFVVRELLLVVIQQINRAAAVARRSVTSFRDVVP*
Ga0066685_101859501	3300005180	Soil	MAPTYRMPNPQRLRSQATVAEIYDALCAARCSAELAGMETDEFVVRELLLAVVAQIDRAATAVRSLSSTP*
Ga0066676_105080122	3300005186	Soil	LSRMAPMHRMPRPPGLWAQAALAEINDALDAARCSAELAGIATEEFVVRELLLVVIQQINRAAAVARRSVTSFRDVVP*
Ga0066676_109228092	3300005186	Soil	MPDPQRRCDEATTAEIHDALSAARCSAELAGMATEEFFVRELLLTVIQQIDRAAAAARRLS*
Ga0066675_110650552	3300005187	Soil	MPDPRRLCDEATAAAICDALGAARCSAQLAGMATEEFVVRELLLTVIQQIDRAAATARRLS*
Ga0066686_102020512	3300005446	Soil	GENRVPAGPRDLLASRPMAPTYRMPNPQRLRSQATVAEIYDALCAARCSAELAGMETDEFVVRELLLAVVAQIDRAATAVRSLSSTP*
Ga0066689_100098521	3300005447	Soil	PMAPTYRMPNPLRLRAQATVAEIHDALCAARCSAELAGMETDEFVVRELLLAVVAQIDRAATAVRCL*
Ga0066682_107953891	3300005450	Soil	NPVLADRRALLASRLMAPTYRMPHPLGLWAQATVAEITDALHAARCAAELAGMETEGFVTRELLLTVVQQIDRATNAVRRLPATASRRDML*
Ga0066681_100252133	3300005451	Soil	MAPMHRMPRPPGLWAEAALAEINDALDAARCSAELAGIATEEFVVRELLLAVIQQIDRAAAVARRSVTLSRDVVS*
Ga0066697_105611642	3300005540	Soil	VPAGPRDLLASRPMAPTYRMPNPQRLRSEATVAEIHDALCAARCSAELAGMETDEFVVRELLLAIVAQIDRAATALRRLSSTS*
Ga0066701_100137401	3300005552	Soil	MAPTYRMPDPQRRCDEATTAEIHDALSAARCSAELAGMATEEFVVRELLLTVIQQIDRAAAAARRLS*
Ga0066701_100277383	3300005552	Soil	MAPTYRMPHPLGLWAQATVAEITDALHAARCAAELAGMETEGFVTRELLLTVVQQIDRATSAVRRLPATASRRDML*
Ga0066707_100153271	3300005556	Soil	APTYRMPDPHRRCDEATTAEIHDALSAARCSAELAGAETEEFIVRELLLTVIQQIDRAAAAARRLS*
Ga0066670_101268753	3300005560	Soil	MAPMHRMPRPPGLWAEAALAEINDALDAARCSAELAGMATEEFVVRELLLAVIQQIDRAAAAARRLS*
Ga0066693_100864312	3300005566	Soil	MAPMHRMPRPPGRWAQATVAELNDALDAARCSAELAGMATEEFVVRELLLAVIQQIDRAAAAARRLS*
Ga0066694_100239832	3300005574	Soil	MPRPPGLWAEAALAEINDALDAARCSAELAGIATEEFVVRELLLAVIQQIDRAAAVARRSVTLSRDVVS*
Ga0066654_103680642	3300005587	Soil	LSRMAPMHRMPRPPGLWAQAALAEINDALDAARCSAELAGIATEEFVVRELLLAVIQQIDRAAAVARRSVTLSRDVVP*
Ga0066706_110968582	3300005598	Soil	VERCRPLLSEIMAPTYRMPDPQRRCDEATTAEIHDALSAARCSAELAGAETEEFIVRELLLTVIQQIDRAAAAARRLS*
Ga0066656_107084351	3300006034	Soil	MAPMHRMPRPPGLWAQEALAEINDALDAARCSAELAGIATEEFVVRELLLVVIQQINRAAAVARRSVTSFRDVVP*
Ga0066653_102389512	3300006791	Soil	MAPMHRMPRPPGLWAQAALAEINDALDAARCSAELAGIATEEFVVRELLLAVIQQIDRAAAVARRSVTSFHDAV*
Ga0066665_108441742	3300006796	Soil	CRPLLSEIMAPTYRMPDPQRRCDEATTAEIHDALSAARCSVQLAGMATEEFVVRELLLTVIQQIDRAAAAARRLS*
Ga0066659_102578062	3300006797	Soil	SAKNDPLRAQALPSLRPVSPTYKMPDVTALRRAAIVAEANNALCAARCSAQLAGLETREFVVRELLLTVMEQIDRAATAVRQLH*
Ga0066659_110997962	3300006797	Soil	MTPTYRMPNPQGLCDEATAAEIRDALGAARCSAHLAGMATEEFVVRELLVTVIQQIDRAAAAARRLS*
Ga0066659_111478562	3300006797	Soil	VGRCRLLLSEIMAPTYRMPDPHRRCDEATTAEIHDALSAARCSAELAGTETEEFIVRELLLTVIQQIDRAAAAARRLS*
Ga0099793_100511053	3300007258	Vadose Zone Soil	MPSPQRRRDEAAVAELCDALCAARCSAELAGTQTKEFVVRELLLAVVQQIDRAAAAARRLS*
Ga0066710_1010703213	3300009012	Grasslands Soil	VSPTYKMPDVTALRRAAIVAEANNALCAARCSAQVAGLETREFVVRELLLTVMEQIDRAATAVRQLH
Ga0066710_1023866382	3300009012	Grasslands Soil	SGLWAQATVAEVNDALHAARCSAQLAGMATEEFVVRELLLTVIQQIDRAVTAARRLHPPS
Ga0099828_103017453	3300009089	Vadose Zone Soil	MAPTYRMPHPLGLWAQATVAEITDALHAARCAAELAGMETEEFVIRELLLTVVQQIDRATSAVRRLPTTASRWDMV*
Ga0099827_113081751	3300009090	Vadose Zone Soil	IPTLGGDAVRSRPMTPTYRMPDPEGLRSQAVVSDINNALCAARCSAQLAGLETDEFVVRELLLTVIQQIDRAAGAVRRLR*
Ga0066709_1001134303	3300009137	Grasslands Soil	MPDPRRLCDEATAAAICDALGAARCSAQLAGMATEEFVVRELLLTVIQQIDRAAATARRLF*
Ga0066709_1010795372	3300009137	Grasslands Soil	MAPIHRMPRPPGLWAEAALAEINDALDAARCSAELAGIATEEFVVRELLLAVIQQIDRAAAVARRSVTLSRDVVS*
Ga0066709_1025721502	3300009137	Grasslands Soil	YRMPDPQRRCDEATTAEIHDALSAARCSAELAGAETEEFIVRELLLTVIQQIDRAAAAARRLS*
Ga0134070_100233573	3300010301	Grasslands Soil	KLSRMAPMHRMPRPPGLWAQAALAEINDALDAARCSAELAGIATEEFVVRELLLVVIQQINRAAAVARRSVTSFRDVVP*
Ga0134070_100996302	3300010301	Grasslands Soil	MAPTYRMPNPQRLRSEATVAEIHDALCAARCSAELAGMETDEFVVRELLLAVVAQIDRAATAVRSLSSTP*
Ga0134082_100328993	3300010303	Grasslands Soil	MAPMHRMPRPPGLWAQAALAEINDALDAARCSAELAGIATEEFVVRELLLAVIQQIDRAAAVARRSVTLSRDVVP*
Ga0134067_101204881	3300010321	Grasslands Soil	MAPMHRMPRSPGLWAQAALAEINDALDAARCSAELAGIATEEFVVRELLLAVIQQIDRAAAVARRSVTLSRDVVS*
Ga0134064_100231313	3300010325	Grasslands Soil	MAPTYRMPNPQRLRSQATVAEIYDALCAARCSAELAGMETDEFVVRELLLAVVAQIDRAPTAVRSLSSTP*
Ga0134064_103168701	3300010325	Grasslands Soil	SQATVAEIHDALCAARCSAELAGMETDEFVVRELLLAVVAQIDRAATAVRRLSAPS*
Ga0134063_100192233	3300010335	Grasslands Soil	VSPTYKMPDVTALRRAAIVAEANNALCAARCSAQVAGLETREFVVRELLLTVMEQIDRAATAVRQLH*
Ga0134071_100326681	3300010336	Grasslands Soil	MPRYQMFQGPDAQRRATCAEITDALSAARCSAELAGMETDEFVVRELLLVVVQQLDRAASAVRRLD*
Ga0137364_101398871	3300012198	Vadose Zone Soil	MAPMHRMPPPPGLWAQAALAEINDALGAARCSAELAGIATEEFVVRELLLAVIQQIDRAA
Ga0137364_108746092	3300012198	Vadose Zone Soil	MAPMHRMPRPPGLWAQAALAEINDALDAARCSAELAGIATEEFVVRELLLAVIQQIDRAAAVARRSVTSFRDAV*
Ga0137364_110000221	3300012198	Vadose Zone Soil	MAPMHRMPRPSGLWAQAAVAELNDALDAARCSAELAGMATGEFVVRELLLAVIQQVDRAAEVARRLS*
Ga0137383_100130704	3300012199	Vadose Zone Soil	MPDPRRLRDEATAAEICDALGAARCSAELAGTQTDEFIVRELLLIVTQQIDRAAAAARRLS*
Ga0137383_100839502	3300012199	Vadose Zone Soil	VSPTYKMPDVTALRRAAIVAEANNALCAARCSAQLAGLETRDFVVRELLLTVMEQIDRAATAVRQLH*
Ga0137382_100093021	3300012200	Vadose Zone Soil	MPNPQGLCDEATAAEIRDALGAARCSAHLAGMATKEFVVRELLVTVIQQIDRAAAAARRLS*
Ga0137382_109218521	3300012200	Vadose Zone Soil	MAPMHRMPRPPGLWAQAAVAELNDALDAARCSAELAGMATGEFVVRELLLAVIQQVDRAAEVARRLS*
Ga0137365_1000188616	3300012201	Vadose Zone Soil	MAPTYRMPTPQRLRSQATVAEIHDALCAARCSAELAGMETDEFVVRELLLAIVAQIDRAAAAVRRL*
Ga0137399_100001873	3300012203	Vadose Zone Soil	MPSPQRRRDEAAVAELCDALCAARCSTELAGTQTKEFVVRELLLAVVQQIDRAAAAARRLS*
Ga0137399_112572261	3300012203	Vadose Zone Soil	MTPTYRMPDPEGLRSQAVVSDINNALCAARCSAQLAGLETDEFVVRELLLTVIQQIDRAAGAVRRLR*
Ga0137380_100048017	3300012206	Vadose Zone Soil	MTPIYRMPSPERRWQQAAVAEIHDALCAARCCAKLAGMEADEFVVRELLLAVVEQIDRARTALRRFCSTSSR*
Ga0137380_106165772	3300012206	Vadose Zone Soil	MAPTYRMPNPLRLRAQATLAEIHDALCAARCSAELAGMETDEFVVRELLLAVVAQIDRAATAVRCL*
Ga0137376_105490232	3300012208	Vadose Zone Soil	MAPMHRMPPPPGLWAQAALAEINDALDAARCSAELAGIATEEFVVRELLLAVIQQIDRAAAVARRSVTSFHDAV*
Ga0137379_103665681	3300012209	Vadose Zone Soil	MAPTYRMPTPQRLRSQATVAEIHDALCAARCSAELAGMETDEFVVRELLLAIVAQIDRAATAVRRLSAPS*
Ga0137379_113741122	3300012209	Vadose Zone Soil	MAPTYRMPNPQRLRAQATVAEITDALGAARCSAELAGMETDEFVVRELLLAIVAQIDRAATAVRRLSAPS*
Ga0137361_102667632	3300012362	Vadose Zone Soil	MAPTYRMPHPLGLWAQATVAEITDALHAARCAAELAGMEPEGFVTRELLLTVVQQIDRATSAVRRLPATASRRDML*
Ga0137396_1000003524	3300012918	Vadose Zone Soil	MAPTYRMPSPQRRRDEAAVAELCDALCAARCSAELAGTQTKEFVVRELLLAVVQQIDRAAAAARRLS*
Ga0134075_104157762	3300014154	Grasslands Soil	MAPTYRMPNPQRLRSQATVADIYDALCAARCSAELAGMETDEFVVRELLLAIVAQIDRAATALRRLSSTS*
Ga0134078_100168271	3300014157	Grasslands Soil	QRLRSEATVAEIHDALCAARCSAELAGMETDEFVVRELLLAIVAQIDRAATALRRLSSTS
Ga0134078_100197462	3300014157	Grasslands Soil	MTPTYRMPNPQRLYDEATAADLRNALSAARCSAELAGMQTDEFVVRELLLTVIQQIDRATAAARRLS*
Ga0134089_102235041	3300015358	Grasslands Soil	MPRYQMFQGPDAQRRAMCAEITDALSAARCSAELAGMETDEFVVRELLLVVVQQLDRAASAVRRLD*
Ga0134069_10310821	3300017654	Grasslands Soil	PSGENRVPAGPRDLLASRPMAPTYRMPNPQRLRSQATVAEIYDALCAARCSAELAGMETDEFVVRELLLAVVAQIDRAATAVRSLSSTP
Ga0134112_100072652	3300017656	Grasslands Soil	MPRYQMFQGPDAQRRATCAEITDALSAARCSAELAGMETDEFVVRELLLVVVQQLDRAASAVRRLD
Ga0134074_11045631	3300017657	Grasslands Soil	MAPMHRMPRPPGLWAQAALAEINDALDAARCSAELAGIATEEFVVRELLLVVIQQINRAAAVARRSVTSFRDV
Ga0066655_100013115	3300018431	Grasslands Soil	MAPTYRMPHPLGLWAQATVAEITDALHAARCAAELAGMETEGFVTRELLLTVVQQIDRATSAVRRLPATASRRDML
Ga0066655_101509482	3300018431	Grasslands Soil	MAPMHRMPRPPGLWAQAALAEINDALDAARCSAELAGIATEEFVVRELLLVVIQQINRAAAVARRSVTSFRDVVP
Ga0066655_106805282	3300018431	Grasslands Soil	VPAGPRDLLASRPMAPTYRMPNPQRLRSQATVAEIYDALCAARCSAELAGMETDEFVVRELLLAVVAQIDRAATAVRSLSSTP
Ga0066667_100706582	3300018433	Grasslands Soil	MAPTYRMPNPQRLRSQATVAEIYDALCAARCSAELAGMETDEFVVRELLLAVVAQIDRAATAVRSLSSTP
Ga0066667_105481062	3300018433	Grasslands Soil	MAPMHRMPRPPGRWAQVTVAELNDALDAARCSAELAGMATEEFVVRELLLAVIQQIDRAAAAARRLS
Ga0066667_106778382	3300018433	Grasslands Soil	MAPMHRMPRPSGLWAQATVAEVNDALHAARCSAQLAGMATEEFVVRELLLTVIQQIDRAVTAARRLHPPS
Ga0066667_107062742	3300018433	Grasslands Soil	VPAGPRDLLASRPMAPTYRMPNPQRLRSEATVAEIHDALCAARCSAELAGMETDEFVVRELLLAIVAQIDRAATALRRLSSTS
Ga0066667_123423461	3300018433	Grasslands Soil	RTMTPTYRMPNPQGLCDEATAAEIRDALGAARCSAHLAGMATEEFVVRELLVTVIQQIDRAAAAARRLS
Ga0066662_101772122	3300018468	Grasslands Soil	MPDPQRRCDEATTAEIHDALSAARCSAELAGAETEEFIVRELLLTVIQQIDRAAAAARRL
Ga0066669_102015422	3300018482	Grasslands Soil	MAPMHRMPRPPGRWAQATVAELNDALDAARCSAELAGMATEEFVVRELLLAVIQQIDRAAAAARRLS
Ga0066669_105599002	3300018482	Grasslands Soil	MAPTYRMPNPQRLRSEATVAEIHDALCAARCSAELAGMETDEFVVRELLLAIVAQIDRAATALRRLSSTS
Ga0066669_106086932	3300018482	Grasslands Soil	ENRVPVGPRDLLASRPMAPTYRMPTPQRLRSQATVAEIHDALCAARCSAELAGMETDEFVVRELLLAVVAQIDRAATAVRRLSAPS
Ga0209002_103975691	3300025289	Soil	MPGREALLRQALVSDINNALSAARCSAQLAGMETDEFVVRELLRTVIEQIDRAACTVRRLSVTSFS
Ga0209519_103596982	3300025318	Soil	MTPTYRMPGREALLRQALVSDINNALSAARCSAQLAGMETDEFVVRELLHTVIEQIDRAACTVRRLSVTSFS
Ga0209520_102427531	3300025319	Soil	MTPTYRMPGREALLRQALVSDINNALSAARCSAQLAGMETDEFVVRELLRTVIEQIDRAACTVRRLSVTSFS
Ga0209350_10335882	3300026277	Grasslands Soil	HRMPRPSGLWAQATVAEVNDALHAARCSAQLAGMATEEFVVRELLVTVIQQIDRAAAAARRLS
Ga0209235_10004513	3300026296	Grasslands Soil	MAPTYRMPNPLRLRAQATVAEIHDALCAARCSAELAGMETDEFVVRELLLAVVAQIDRAATAVRCL
Ga0209235_10176422	3300026296	Grasslands Soil	MAPTYRMPHPLGLWAQATMAEITDALHAARCAAELAGMETEEFVIRELLLTVVQQIDRATSAVRRLPTTASRWDMV
Ga0209236_10456351	3300026298	Grasslands Soil	MPNPQGLCDEATAAEIRDALGAARCSAHLAGMATEEFVVRELLLTVIQQIDRAAAAARRL
Ga0209236_11630342	3300026298	Grasslands Soil	VPVGRRDLLASRLMAPTYRMPHPLGLWAQATMAEITDALHAARCAAELAGMETEEFVIRELLLTVVQQIDRATSAVRRLPTTASRWDMV
Ga0209027_11529282	3300026300	Grasslands Soil	MAPMHRMPRPPGLWAQAALAEINDALDAARCSAELAGIATEEFVVRELLLAVIQQIDRAAAVARRSVTLSRDVVS
Ga0209238_10546982	3300026301	Grasslands Soil	VLPRPTRPHTLSRMAPMHRMPRPPGLWVQATVAELNDALDAARCSAELAGMATEEFVVRELLLAVIQQIDRAATAARRLS
Ga0209238_11443782	3300026301	Grasslands Soil	MPDPRRLRDEATAAEICDALGAARCSAELAGTETEEFVVRELLLTVIQQVDRAAAAARRL
Ga0209688_10668192	3300026305	Soil	RWAQATVAELNDALDAARCSAELAGMATEEFVVRELLLAVIQQIDRAAAAARRLS
Ga0209468_10014962	3300026306	Soil	MTPTYRMPNPQRLYDEATAADLRNALSAARCSAELAGMQTDEFVVRELLLTVIQQIDRATAAARRAELALLAQADGR
Ga0209468_10060161	3300026306	Soil	GPRDLLASRPMAPTYRMPTPQRLRSQATVAEIHDALCAARCSAELAGMETDEFVVRELLLAVVAQIDRAATAVRRLSAPS
Ga0209468_10096812	3300026306	Soil	LRAQALPSLRPVSPTYKMPDVTALRRAAIVAEANNALCAARCSAQLAGLETREFVVRELLLTVMEQIDRAATAVRQLH
Ga0209469_100197012	3300026307	Soil	MAPTYRMPTPQRLRSQATVAEIHDALCAARCSAELAGMETDEFVVRELLLAVVAQIDRAATAVRRLSAPS
Ga0209469_10804112	3300026307	Soil	RVPAGPRDLLASRPMAPTYRMPNPQRLRSEATVAEIHDALCAARCSAELAGMETDEFVVRELLLAIVAQIDRAATALRRLSSTS
Ga0209265_12112372	3300026308	Soil	VPAGPRDLLASRPMAPTYRMPNPQRLRSEATVAEIHDALCAARCSAELAGMETDEFVVRELLLAIVAQI
Ga0209055_100009038	3300026309	Soil	MAPTYRMPSPQRRRDEAAVAELCDALCAARCSAELAGTQTKEFVVRELLLAVIQQIDQAAAAARRLS
Ga0209268_10174032	3300026314	Soil	MAPMHRMPRPPGLWAEAALAEINDALDAARCSAELAGIATEEFVVRELLLAVIQQIDRAAAVARRSVTLSRDVVS
Ga0209268_11505991	3300026314	Soil	MAPTYRMPNPQRLRSEATVAEIHDALCAARCSAELAGMETDEFVVRELLLAIVAQIDRA
Ga0209686_10153292	3300026315	Soil	MTPTYRMPNPQRLYDEATAADLRNALSAARCSAELAGMQTDEFVVRELLLTVIQQIDRATAAARRLS
Ga0209154_11492501	3300026317	Soil	MPDPHRRCDEATTAEIHDALSAARCSAELAGTETEEFIVRELLLTVIQQIDRAAAAARRL
Ga0209152_101992052	3300026325	Soil	RMPRPPGLWAQAALAEINDALDAARCSAELAGIATEEFVVRELLLAVIQQIDRAAAVARRSVTLSRDVVS
Ga0209801_100126518	3300026326	Soil	MPDPHRRCDEATTAEIHDALSAARCSAELAGTETTEEFVVRELLVTVIQQIDRAAAAARRLS
Ga0209801_10059437	3300026326	Soil	MAPTYRMPHPLGLWAEATVAEITDALHAARCAAELAGMETEGFVTRELLLTVVQQIDRATSAVRRLPATASRRDML
Ga0209802_12824481	3300026328	Soil	VGRCRLLLSEIMAPTYRMPDPQRRCDEATTAEIHDALSAARCSAELAGTETEEFIVRELLLTVIQQIDRAAAAARRLS
Ga0209375_10320962	3300026329	Soil	MAPTYRMPNPQRLRSQATVAEIYDALCAARCSAELAGMETDEFVVRELLLAIVAQIDRAATALRRLSSTS
Ga0209057_10908541	3300026342	Soil	MAPMHRMPRPPGLWAQAALAEINDALDAARCSAELAGIATEEFVVRELLLAVIQQIDRAAAVARRSVTLSRDVV
Ga0209159_11967891	3300026343	Soil	RVPAGPRDLLASRPMAPTYRMPNPQRLRSQATVAEIYDALCAARCSAELAGMETDEFVVRELLLAVVAQIDRAATAVRSLSSTP
Ga0209690_100031827	3300026524	Soil	MPDPQRRCDEATTAEIHDALSAARCSAELAGMATEEFVVRELLLTVIQQIDRAAAAARRL
Ga0209806_10471501	3300026529	Soil	MTPTYRMPNPQRLYDEATAADLRNALSAARCSAELAGMQTDEFVVRELLLTVIQQIDRATAAA
Ga0209806_11451802	3300026529	Soil	PLLAEIMAPTYRMPDPQRRCDEATTAEIHDALSAARCSAELAGAETEEFIVRELLLTVIQQIDRAAAAARRLS
Ga0209161_100016451	3300026548	Soil	PTYRMPDPQRRCDEATTAEIHDALSATRCSAELAGAETEEFIVRELLLTVIQQIDRAAAAARRLS
Ga0209161_103206982	3300026548	Soil	MTPTYRMPNPQGLCDEATAAEIRDALGAARCSAHLAGMATEEFVVRELLVTVIQQIDRAAAAARRLS
Ga0209474_100112338	3300026550	Soil	MAPMHRMPRSPGLWAQAALAEINDALDAARCSAELAGIATEDFVVRELLLAVIQQIDRAAAVARRSVTLSRDVVS
Ga0209076_10504982	3300027643	Vadose Zone Soil	MAPTYRMPSPQRRRDEAAVAELCDALCAARCSAELAGTQTKEFVVRELLLAVVQQIDRAAAAARRLS
Ga0209076_11512071	3300027643	Vadose Zone Soil	VPADRRALLASRLMAPTYRMPHPLGLWAQATVAEITDALHAARCAAELAGMETEGFVTRELLLTVVQQIDRATSAVRRLPATASRRDML
Ga0209689_13896651	3300027748	Soil	MPNPQGLCDEATAAEIRDALGAARCSAHLAGMATEEFVVRELLVTVIQQIDRAAAAARRL
Ga0137415_1000048424	3300028536	Vadose Zone Soil	MAPTYRMPSPQRRRDEAAVAELCDALCAARCSTELAGTQTKEFVVRELLLAVVQQIDRAAAAARRLS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F053944

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences