NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F053914

Metagenome / Metatranscriptome Family F053914

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F053914
Family Type Metagenome / Metatranscriptome
Number of Sequences 140
Average Sequence Length 85 residues
Representative Sequence MHSPLDLPIVQALSEHDTHPSLRASATAWLAAYDLAHQLGFNEGAALGQADTAWDRAAEPWRLSVGDEPAYTLTEYGRRAIQVRR
Number of Associated Samples 85
Number of Associated Scaffolds 140

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 75.71 %
% of genes near scaffold ends (potentially truncated) 24.29 %
% of genes from short scaffolds (< 2000 bps) 95.00 %
Associated GOLD sequencing projects 80
AlphaFold2 3D model prediction Yes
3D model pTM-score0.66

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (77.143 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(57.857 % of family members)
Environment Ontology (ENVO) Unclassified
(60.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(69.286 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 52.21%    β-sheet: 0.00%    Coil/Unstructured: 47.79%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.66
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 140 Family Scaffolds
PF13155Toprim_2 17.14
PF13662Toprim_4 2.14
PF13361UvrD_C 0.71



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A77.14 %
All OrganismsrootAll Organisms22.86 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2140918007|ConsensusfromContig171359Not Available632Open in IMG/M
3300001593|JGI12635J15846_10336765Not Available930Open in IMG/M
3300001664|P5cmW16_1042775All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium817Open in IMG/M
3300005167|Ga0066672_10546554Not Available751Open in IMG/M
3300005172|Ga0066683_10643204Not Available637Open in IMG/M
3300005177|Ga0066690_10438134Not Available885Open in IMG/M
3300005178|Ga0066688_10303468Not Available1030Open in IMG/M
3300005445|Ga0070708_100639563Not Available1003Open in IMG/M
3300005445|Ga0070708_100825600All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium871Open in IMG/M
3300005454|Ga0066687_10908846Not Available525Open in IMG/M
3300005467|Ga0070706_100870564Not Available833Open in IMG/M
3300005468|Ga0070707_100931354Not Available834Open in IMG/M
3300005471|Ga0070698_101544274Not Available615Open in IMG/M
3300005471|Ga0070698_101781097Not Available568Open in IMG/M
3300005540|Ga0066697_10470664Not Available719Open in IMG/M
3300005557|Ga0066704_10864259Not Available560Open in IMG/M
3300005586|Ga0066691_10410210Not Available806Open in IMG/M
3300005994|Ga0066789_10470567Not Available525Open in IMG/M
3300006050|Ga0075028_100146669Not Available1243Open in IMG/M
3300006162|Ga0075030_101352836Not Available558Open in IMG/M
3300006162|Ga0075030_101551381Not Available518Open in IMG/M
3300006797|Ga0066659_10752924Not Available801Open in IMG/M
3300006854|Ga0075425_101336391Not Available812Open in IMG/M
3300006914|Ga0075436_100533743Not Available860Open in IMG/M
3300009012|Ga0066710_101062541Not Available1251Open in IMG/M
3300009012|Ga0066710_102176325Not Available811Open in IMG/M
3300009038|Ga0099829_10807014All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium779Open in IMG/M
3300009088|Ga0099830_10358930All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1173Open in IMG/M
3300009088|Ga0099830_10633044Not Available878Open in IMG/M
3300009088|Ga0099830_10636972All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium876Open in IMG/M
3300009088|Ga0099830_11467443Not Available568Open in IMG/M
3300009089|Ga0099828_10501080Not Available1095Open in IMG/M
3300009089|Ga0099828_10570794Not Available1019Open in IMG/M
3300009089|Ga0099828_10753523Not Available873Open in IMG/M
3300009089|Ga0099828_10810801Not Available838Open in IMG/M
3300009089|Ga0099828_10839592Not Available822Open in IMG/M
3300009090|Ga0099827_10229715Not Available1553Open in IMG/M
3300009090|Ga0099827_10592507Not Available956Open in IMG/M
3300009090|Ga0099827_11406887Not Available607Open in IMG/M
3300009098|Ga0105245_11629162Not Available697Open in IMG/M
3300009137|Ga0066709_104390507Not Available515Open in IMG/M
3300011269|Ga0137392_10163840All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales → Sphaerobacterineae → Sphaerobacteraceae → Nitrolancea → Nitrolancea hollandica1802Open in IMG/M
3300011269|Ga0137392_10341519Not Available1240Open in IMG/M
3300011269|Ga0137392_10399689Not Available1140Open in IMG/M
3300011269|Ga0137392_10789039Not Available785Open in IMG/M
3300011269|Ga0137392_10799878Not Available779Open in IMG/M
3300011270|Ga0137391_10190605All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales → Sphaerobacterineae → Sphaerobacteraceae → Nitrolancea → Nitrolancea hollandica → Nitrolancea hollandica Lb1786Open in IMG/M
3300011270|Ga0137391_10337749All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales → Sphaerobacterineae → Sphaerobacteraceae → Nitrolancea → Nitrolancea hollandica → Nitrolancea hollandica Lb1295Open in IMG/M
3300011270|Ga0137391_10455357Not Available1088Open in IMG/M
3300011270|Ga0137391_10925768Not Available712Open in IMG/M
3300011271|Ga0137393_10497714All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales → Sphaerobacterineae → Sphaerobacteraceae → Nitrolancea → Nitrolancea hollandica → Nitrolancea hollandica Lb1046Open in IMG/M
3300011271|Ga0137393_11616857Not Available537Open in IMG/M
3300011992|Ga0120146_1046191Not Available731Open in IMG/M
3300011994|Ga0120157_1047105Not Available937Open in IMG/M
3300011999|Ga0120148_1015643Not Available1773Open in IMG/M
3300012004|Ga0120134_1002099Not Available2554Open in IMG/M
3300012010|Ga0120118_1014587All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales → Sphaerobacterineae → Sphaerobacteraceae → Nitrolancea → Nitrolancea hollandica → Nitrolancea hollandica Lb2196Open in IMG/M
3300012011|Ga0120152_1154585Not Available604Open in IMG/M
3300012019|Ga0120139_1037276All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales → Sphaerobacterineae → Sphaerobacteraceae → Nitrolancea → Nitrolancea hollandica → Nitrolancea hollandica Lb1138Open in IMG/M
3300012096|Ga0137389_10455393Not Available1096Open in IMG/M
3300012096|Ga0137389_11244442Not Available637Open in IMG/M
3300012096|Ga0137389_11332795All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium612Open in IMG/M
3300012189|Ga0137388_10208593Not Available1763Open in IMG/M
3300012189|Ga0137388_10256661All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1593Open in IMG/M
3300012189|Ga0137388_10391405All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales → Sphaerobacterineae → Sphaerobacteraceae → Nitrolancea → Nitrolancea hollandica → Nitrolancea hollandica Lb1286Open in IMG/M
3300012189|Ga0137388_10611506Not Available1013Open in IMG/M
3300012189|Ga0137388_11280059Not Available672Open in IMG/M
3300012189|Ga0137388_11996773Not Available508Open in IMG/M
3300012198|Ga0137364_10265484All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1270Open in IMG/M
3300012198|Ga0137364_10752357Not Available736Open in IMG/M
3300012199|Ga0137383_10385853Not Available1026Open in IMG/M
3300012199|Ga0137383_10812341Not Available682Open in IMG/M
3300012201|Ga0137365_10780899Not Available698Open in IMG/M
3300012201|Ga0137365_10855425Not Available664Open in IMG/M
3300012202|Ga0137363_11572791Not Available549Open in IMG/M
3300012204|Ga0137374_10715491Not Available750Open in IMG/M
3300012205|Ga0137362_11158788Not Available656Open in IMG/M
3300012206|Ga0137380_10424575Not Available1178Open in IMG/M
3300012206|Ga0137380_10930843Not Available745Open in IMG/M
3300012206|Ga0137380_11413297Not Available580Open in IMG/M
3300012208|Ga0137376_11169915Not Available657Open in IMG/M
3300012208|Ga0137376_11689637Not Available524Open in IMG/M
3300012209|Ga0137379_10350624All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1385Open in IMG/M
3300012209|Ga0137379_10665857Not Available947Open in IMG/M
3300012209|Ga0137379_10856212Not Available814Open in IMG/M
3300012209|Ga0137379_11527415Not Available568Open in IMG/M
3300012210|Ga0137378_10063080All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales → Sphaerobacterineae → Sphaerobacteraceae → Nitrolancea → Nitrolancea hollandica → Nitrolancea hollandica Lb3352Open in IMG/M
3300012210|Ga0137378_10162442Not Available2073Open in IMG/M
3300012210|Ga0137378_10435215Not Available1215Open in IMG/M
3300012210|Ga0137378_10639776All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium974Open in IMG/M
3300012211|Ga0137377_11137664Not Available710Open in IMG/M
3300012349|Ga0137387_10643615All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium768Open in IMG/M
3300012351|Ga0137386_10246561Not Available1284Open in IMG/M
3300012351|Ga0137386_10650994Not Available758Open in IMG/M
3300012356|Ga0137371_10335976All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1175Open in IMG/M
3300012357|Ga0137384_10120727All Organisms → cellular organisms → Bacteria2192Open in IMG/M
3300012357|Ga0137384_10493957Not Available1005Open in IMG/M
3300012357|Ga0137384_10899366Not Available713Open in IMG/M
3300012359|Ga0137385_10654156All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium880Open in IMG/M
3300012359|Ga0137385_11642388Not Available507Open in IMG/M
3300012360|Ga0137375_11377540Not Available527Open in IMG/M
3300012363|Ga0137390_10189178All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2045Open in IMG/M
3300012363|Ga0137390_10767562Not Available923Open in IMG/M
3300012363|Ga0137390_11375104Not Available651Open in IMG/M
3300012363|Ga0137390_11780361Not Available548Open in IMG/M
3300012532|Ga0137373_10405728All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1057Open in IMG/M
3300012917|Ga0137395_10371777All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1021Open in IMG/M
3300012917|Ga0137395_10574388Not Available814Open in IMG/M
3300012930|Ga0137407_11735404Not Available595Open in IMG/M
3300012944|Ga0137410_11013276Not Available707Open in IMG/M
3300013501|Ga0120154_1019385Not Available1783Open in IMG/M
3300013501|Ga0120154_1074926Not Available785Open in IMG/M
3300013758|Ga0120147_1017106Not Available1441Open in IMG/M
3300013764|Ga0120111_1022848Not Available1741Open in IMG/M
3300013764|Ga0120111_1102994Not Available672Open in IMG/M
3300013766|Ga0120181_1015529All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2038Open in IMG/M
3300013772|Ga0120158_10303984Not Available770Open in IMG/M
3300013831|Ga0120126_1004304Not Available930Open in IMG/M
3300014052|Ga0120109_1052503Not Available922Open in IMG/M
3300014056|Ga0120125_1030759All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales → Sphaerobacterineae → Sphaerobacteraceae → Nitrolancea → Nitrolancea hollandica → Nitrolancea hollandica Lb1150Open in IMG/M
3300014058|Ga0120149_1032328Not Available1269Open in IMG/M
3300018468|Ga0066662_12513942Not Available543Open in IMG/M
3300021861|Ga0213853_11406817Not Available1082Open in IMG/M
3300025910|Ga0207684_10256320All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales → Sphaerobacterineae → Sphaerobacteraceae → Nitrolancea → Nitrolancea hollandica → Nitrolancea hollandica Lb1509Open in IMG/M
3300025910|Ga0207684_10565600Not Available972Open in IMG/M
3300025922|Ga0207646_10600228Not Available988Open in IMG/M
3300025922|Ga0207646_10722761Not Available890Open in IMG/M
3300025927|Ga0207687_11917246Not Available506Open in IMG/M
3300025939|Ga0207665_11153073Not Available618Open in IMG/M
3300026035|Ga0207703_11834935Not Available582Open in IMG/M
3300027565|Ga0209219_1078989All Organisms → cellular organisms → Bacteria816Open in IMG/M
3300027678|Ga0209011_1023358Not Available1997Open in IMG/M
3300027862|Ga0209701_10316792All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium891Open in IMG/M
3300027862|Ga0209701_10378351All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium794Open in IMG/M
3300027875|Ga0209283_10591692Not Available704Open in IMG/M
3300027875|Ga0209283_10792210Not Available584Open in IMG/M
3300027875|Ga0209283_10844769All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium559Open in IMG/M
3300028047|Ga0209526_10296216Not Available1096Open in IMG/M
3300028536|Ga0137415_10583008Not Available929Open in IMG/M
3300029636|Ga0222749_10563709Not Available620Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil57.86%
PermafrostEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost13.57%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere7.86%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil6.43%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil2.86%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil2.86%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds2.14%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere1.43%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.43%
WatershedsEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds0.71%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Soil0.71%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil0.71%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Soil0.71%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.71%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2140918007Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Active_allEnvironmentalOpen in IMG/M
3300001593Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2EnvironmentalOpen in IMG/M
3300001664Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - 5cm_reassembledEnvironmentalOpen in IMG/M
3300005167Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121EnvironmentalOpen in IMG/M
3300005172Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132EnvironmentalOpen in IMG/M
3300005177Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139EnvironmentalOpen in IMG/M
3300005178Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137EnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005454Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136EnvironmentalOpen in IMG/M
3300005467Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaGEnvironmentalOpen in IMG/M
3300005468Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaGEnvironmentalOpen in IMG/M
3300005471Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaGEnvironmentalOpen in IMG/M
3300005540Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146EnvironmentalOpen in IMG/M
3300005557Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153EnvironmentalOpen in IMG/M
3300005586Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140EnvironmentalOpen in IMG/M
3300005994Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049EnvironmentalOpen in IMG/M
3300006050Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014EnvironmentalOpen in IMG/M
3300006162Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012EnvironmentalOpen in IMG/M
3300006797Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108EnvironmentalOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006914Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5Host-AssociatedOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009088Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaGEnvironmentalOpen in IMG/M
3300009089Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaGEnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300011269Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaGEnvironmentalOpen in IMG/M
3300011270Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaGEnvironmentalOpen in IMG/M
3300011271Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaGEnvironmentalOpen in IMG/M
3300011992Permafrost microbial communities from Nunavut, Canada - A23_65cm_12MEnvironmentalOpen in IMG/M
3300011994Permafrost microbial communities from Nunavut, Canada - A7_65cm_12MEnvironmentalOpen in IMG/M
3300011999Permafrost microbial communities from Nunavut, Canada - A28_65cm_6MEnvironmentalOpen in IMG/M
3300012004Permafrost microbial communities from Nunavut, Canada - A30_5cm_6MEnvironmentalOpen in IMG/M
3300012010Permafrost microbial communities from Nunavut, Canada - A7_35cm_12MEnvironmentalOpen in IMG/M
3300012011Permafrost microbial communities from Nunavut, Canada - A30_65cm_6MEnvironmentalOpen in IMG/M
3300012019Permafrost microbial communities from Nunavut, Canada - A7_5cm_12MEnvironmentalOpen in IMG/M
3300012096Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaGEnvironmentalOpen in IMG/M
3300012189Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaGEnvironmentalOpen in IMG/M
3300012198Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012199Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012201Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012204Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012205Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaGEnvironmentalOpen in IMG/M
3300012206Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012209Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012210Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012211Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012349Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaGEnvironmentalOpen in IMG/M
3300012351Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012356Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012357Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012359Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012360Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaGEnvironmentalOpen in IMG/M
3300012363Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaGEnvironmentalOpen in IMG/M
3300012532Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012917Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaGEnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012944Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300013501Permafrost microbial communities from Nunavut, Canada - A35_65cm_0.25MEnvironmentalOpen in IMG/M
3300013758Permafrost microbial communities from Nunavut, Canada - A24_65cm_12MEnvironmentalOpen in IMG/M
3300013764Permafrost microbial communities from Nunavut, Canada - A28_35cm_6MEnvironmentalOpen in IMG/M
3300013766Permafrost microbial communities from Nunavut, Canada - A26_65cm_6MEnvironmentalOpen in IMG/M
3300013772Permafrost microbial communities from Nunavut, Canada - A10_80_0.25MEnvironmentalOpen in IMG/M
3300013831Permafrost microbial communities from Nunavut, Canada - A21_5cm_6MEnvironmentalOpen in IMG/M
3300014052Permafrost microbial communities from Nunavut, Canada - A23_35cm_12MEnvironmentalOpen in IMG/M
3300014056Permafrost microbial communities from Nunavut, Canada - A20_5cm_0MEnvironmentalOpen in IMG/M
3300014058Permafrost microbial communities from Nunavut, Canada - A3_65cm_0.25MEnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300021861Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2016 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300025910Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025922Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025927Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025939Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026035Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300027565Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027678Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027862Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027875Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300028047Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300028536Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300029636Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
A_all_C_010233502140918007SoilMQSPLDLPTVQGLREHTSHPSLQASATAWLGAYALAHQFSFTEAVALRQANAAWDRVSQLWHQPLEDETGYELTELGRRAIQVGC
JGI12635J15846_1033676533300001593Forest SoilTHPSLRASATAWLAAYDLAHQLGFNEGAALGQADTAWDRAAEPWRLSVGDEPAYTLTEYGRRAIQVRR*
P5cmW16_104277523300001664PermafrostMHSPLDLPIVQALSEHDTHPSLRASATAWLAAYDLAHQLGFNEGAALGQADTAWDRAAEPWRLSVGDEPAYTLTEYGR
Ga0066672_1054655433300005167SoilMHSPLDLPTVQALGDYSTHPCLQASANAWLAAYNLAHQLAFTEAVALRQAGTAWDRAAEQWRGPVGDEPVYELTEVGRRAIQVGC*
Ga0066683_1064320413300005172SoilMHSLLDLPTVQALGEHRTHPCLHASANAWLAAYNLAHQLAFTEAVALRQAGTAWDRAAEPWRRPLGDQPVYELTEVGRRAIQVRC*
Ga0066690_1043813423300005177SoilMHSPLDVPIVQALSEHRTHPSLRASANAWLTAHDLARQLGFNETAALGQADTAWDRAAEPWRQPVGDEPAYTLTEFGRRAIQVRR*
Ga0066688_1030346823300005178SoilMHSPLDLPIVQALSEHHAHPSLRASANAWLAAYDLARQLGFNETAALGQADTAWDRAAEPWRQPVGDEPAYSLTEFGRRAIQVRR*
Ga0070708_10063956333300005445Corn, Switchgrass And Miscanthus RhizosphereMHSPLDVPIVQALSKHRTHPSLRASANAWLAAYDLAHQLGFNEGAALGQADTAWDRAAEPWRLSVGDEPAYTLTEFGRRAIQVRR*
Ga0070708_10082560013300005445Corn, Switchgrass And Miscanthus RhizosphereMQSPLDVPTVQAVGERSTHPSLQASATAWLGAYALAHQFSFTEEVALRQADAAWDRVAELWHQPLLDEPDDEFTEPGRRGAPRATVTCTRAPSTR
Ga0066687_1090884623300005454SoilHSLLDLPTVQALGEHSTHPCLHASANAWLAAYNLAHQLAFTEAVALRQAGTAWDRAAEQWRGPVGDEPVYELTEVGRRAIQVGC*
Ga0070706_10087056423300005467Corn, Switchgrass And Miscanthus RhizospherePEGSQEVCMQSPLDLPTVQAVVEHSTHPSFQASATAWLGAYALAHQFSFTEAVARRQADAAWDRVAELWQQPLRDEPDDEFTEPGRRAVDLLR*
Ga0070707_10093135433300005468Corn, Switchgrass And Miscanthus RhizosphereRCRRAALPAYSLPTDPPGSQEVCMHSPFDLPIVQALSEHRTHPSLRASANAWLAAYDLARQLGFNETAALGQADTAWDRAAEPWRVPMAEEPAYTLTEYGRRAIQVRR*
Ga0070698_10154427413300005471Corn, Switchgrass And Miscanthus RhizosphereMHSPLDLPIVQALSEHDTHPSLRASATAWLAAYDLAHQLGFNEGAALGQADTAWDRATEPWRLSVGDEPAYTLTEYGRRAIQVRR*
Ga0070698_10178109713300005471Corn, Switchgrass And Miscanthus RhizosphereMHSPLDLPIVQALSKHRTHPSLRASANAWLAAYDLAHQLGFNEGAALGQADTAWDRAAEPWRVPMAEEPAYTLTEFGRRAIQVRR*
Ga0066697_1047066413300005540SoilYSLPTDPPGSQEVCMHSPLDLPIVQALSEHHAHPSLRASANAWLAAYDLARQLGFNETAALGQADTAWDRAAEPWRLPAGDEPAYSLTEFGRRAIQVRR*
Ga0066704_1086425923300005557SoilMHSPLDLPIVQALSEHDTHPSLRASATAWLAAYDLAHQLGFNEGAALGQADTAWDRAAEPWRLSVGDEPAYTLTEYGRRAIQ
Ga0066691_1041021023300005586SoilMHSPLDLPIVQALSEHRTHPSLRASANAWLAAYDPARQRGFNETAALGQADTAWDRAAEPWRLPAGDEPAYTLTEFGRRAIQVMR*
Ga0066789_1047056723300005994SoilHPSLQASATAWLGAYALAHQFSFTEEVALRQANAAWDRVAQLWHQPLEDETGYELTELGRRAIQVGC*
Ga0075028_10014666923300006050WatershedsMHSPFDLPIVQALSEHDTHPSLRASATAWLAAYDLARQLGFNEGAALGQADTAWDRAAEPWRPLVGDEPAYTLTEFGRRAIQVRR*
Ga0075030_10135283613300006162WatershedsMQSPFDLPTVQAVGEQSTHPSLKASASAWLGAYALAHQLSFTEAVALRQADAAWDRVAELWHQPLRDEPDDEFTEPGRRAVDLPR*
Ga0075030_10155138123300006162WatershedsMHSPLDLPIVQALSEHDTHPSLRASATAWLAAYDLAHQLGFNEGAALGQADTAWDRAAEPWRLPTGDEPADTLTECGCRAIQVGR*
Ga0066659_1075292413300006797SoilQALPMPSGRADRSYSLAPDPPGSQEVCMHSPLDLPIVQALREHRTHPSLRASANAWLAAHDLAHQLGFNEGAALGQADTAWDRAAEPWRVPMAEEPAHTVTELGRRAIQVKP*
Ga0075425_10133639123300006854Populus RhizosphereSIVIRPTPEGSQEVCMQSPLDVPTVQAVSEGSTHPSLQASATAWLGAYALAHQFSFTEAVALRQADAAWDRVAELWQQPLRDEPDDEFTEPGRRAVDLLR*
Ga0075436_10053374313300006914Populus RhizosphereSPADWSGSHLSIVIRPTPEGSQEVCMQSPLDVPTVQAVGERSTHPSLQASATAWLGAYALAHQFSFTEAVARRQADAAWDRVAELWQQPLRDESDDEFTEPGRRAVDLLR*
Ga0066710_10106254133300009012Grasslands SoilMHSPLDLPIVKALSEHDTHPSLRASATAWLAAYDLARQLGFNEGAALGQADTAWDRAAEPWRLSVGDEPAYTLTEYGRRAIQVRR
Ga0066710_10217632523300009012Grasslands SoilMHSPLDLPIVQALSEHRTHPSLRASANAWLAAHDLAHQLGFNETAALGQADTAWDRAAEPWRRPVGDEPVYELTEAGRRAIQVGC
Ga0099829_1080701413300009038Vadose Zone SoilMQALSEHDTHPSLRASATAWLAAYDLAHQLGFNEGAALGQADTAWDRVAEPWRLSVGDEPAYTLTEYGRHAIQVRR*
Ga0099830_1035893023300009088Vadose Zone SoilMQSPLDLPTVQAVGEHSTHPSLQASATAWLGAYALAHQFSFTEAVALRHADAAWDRVAELWHQPLGDEPDYEFTEPGRRAVDLPR*
Ga0099830_1063304423300009088Vadose Zone SoilMHSPLDLLIVQALSEHDTHPSLRASATAWLAAYDLAHQLGFNEGAALGQADTAWDRAAEPWRLSVGDEPAYALTEYGHRAIQVRR*
Ga0099830_1063697223300009088Vadose Zone SoilMYSPLDLPTVQALSEHDTHPSLRATANAWLAAYDLAHQLGFTDAVALRQADTAWDHAGEPLCLPVGDEPVYTLIEGGRRAIQVRR*
Ga0099830_1146744313300009088Vadose Zone SoilMHSPFDLPTVQALSEHDRHPSLRASANAWLAAYDLAHRLAFTEAAALRQADTAWDHAAQPWRRRVGDEPVYELTELGRRAIQPRP*
Ga0099828_1050108033300009089Vadose Zone SoilMHSPLDLLIVQALSEHDTHPSLRASATAWLAAYDLAHQLGFNEGAALGQADTAWDRTAEPWRLSVGDEPAYTLTEYGRHAIQVRR*
Ga0099828_1057079423300009089Vadose Zone SoilMQSPLDLPTVQGLREHTNHPSLQASATAWLGAYALAHQFSFTEAVALRQANAAWDRVAQLWHQPLEDETGYELTELGRRAIQVGC*
Ga0099828_1075352313300009089Vadose Zone SoilMHSPLDLPIVQALSEHRTHPSLRASANAWLTAYDLARQLGFNETAALGQADTAWDRAAEPWRLPAGDEPAYTLTEFGRRAIQVRR*
Ga0099828_1081080113300009089Vadose Zone SoilMQALSEHTTHPSLQASAGAWLAAYDLAHQLAFTEAVALRQADTAWDRAAESWCRPVGDEPFYELTELGRRAVRVRR*
Ga0099828_1083959213300009089Vadose Zone SoilMHTPLDLPTVQALGDYSTHPCLQASANAWLAAYNLAHQLAFTEAVALRQAGTAWDRAAEPWRRPVGDEPVYELTEVGRHAIQVRC*
Ga0099827_1022971533300009090Vadose Zone SoilMHSPLDLPIVQALSEHHTHPSLRASANAWLAAYDLARQLGFNETAALGQADTAWDRAAEPWRRPVGDEPVYELTEAGRRAIQVGC*
Ga0099827_1059250733300009090Vadose Zone SoilMHSPLDLPTVQALSEHDTHPSLRASATAWLAAYDLAHQLGFNEGAALGQADTAWDRAAEPWRLSVGDEPAYTLTEYGRRVIQVRR*
Ga0099827_1140688723300009090Vadose Zone SoilMHSLLDLPTVQALGEHSTHPCLHASVNAWLAAYNLAHQFAFTEAVALRQAGTAWDGAAEQWRRPVGDGPVYELTEVGRRAIQVRC*
Ga0105245_1162916213300009098Miscanthus RhizosphereMHSPLDQPIVQALSEHDTHPSLRASATAWLAAYDLAHQLGFNEGAALGQADTAWDRAAEPWRLSVGDEPAYTLTEYGRRAIQVRR*
Ga0066709_10439050723300009137Grasslands SoilVQALSEHDTQPSLRASATAWLAAYDLARQLGFNEGAALGQADTAWDRAAEPWRLSVGDEPAYTLTEYGCRAIQVRR*
Ga0137392_1016384013300011269Vadose Zone SoilMHSPLDLPTVQALGDSSTHPCLQASANAWLAAYNLAHQLAFTEAVALRQAGTAWDRAAEQWRRPVGDEPVYELTEVGRRAIQVVC
Ga0137392_1034151923300011269Vadose Zone SoilMQSPLDLPTVQAVGEHSTHPSLQASATAWLGAYALAHQFSFTEAVALRHADAAWDRVAELWHQPLLDEPDDELTEPGRRPVDLPR*
Ga0137392_1039968913300011269Vadose Zone SoilLSTMQALSEHTTHPSLQASATAWLAAYDLAHQLAFTEAVALRQADTAWDRAAEPWRLSVGAVSANKMTEYGRRAIQVRR*
Ga0137392_1078903923300011269Vadose Zone SoilMHSPLDLPIVQALSEHQTHPSLRASANAWLTAYDLARQLGFNETAALGQADTAWDRAAEQWRRPVGDEPVYELTEVGRRAIQVVC*
Ga0137392_1079987823300011269Vadose Zone SoilMHSPLDLPIVQALSEHDTHPSLRASATAWLAAYDLAHQLGFNEGAALGQADTAWDRAAEPWRLSVGDEPAYTLTEYGRRAIQVRR*
Ga0137391_1019060533300011270Vadose Zone SoilMHSPLDLPTVQALGDYSTHPCLQASANAWLAGYNLAHQLAFTEAVALRQAGTAWDRAAEPWRRPLGDQPVYELTEVGRRAIQVRC*
Ga0137391_1033774933300011270Vadose Zone SoilMHSPLDLPIVQALSEHDTHPSLRASATAWLAAYDLAHQLGFNEGAALGQADTAWDRAAELWRVPMAEEPAYTVTELGRRAIQVRP*
Ga0137391_1045535733300011270Vadose Zone SoilEHDTHPSLRATANAWLAAYDLAHQLGFTDAVALRQADTAWDHAGEPLCLPVGDEPVYTLIEGGRRAIQVRR*
Ga0137391_1092576823300011270Vadose Zone SoilMQSPLDLPTAQAVGEHSTHPSLQASATAWLGAYALAHQFSFTEAVALRQANAAWDRVAQLRHQPPEDETGYELTELGRRAIQVGC*
Ga0137393_1049771413300011271Vadose Zone SoilMHSPLDLPIVQALSEHDTHPSLRASATAWLAAYDLAHQLGFNDGAALGQADTAWDRAAEPWRLSVGDEPAYTLTEYGRRVIQVRR*
Ga0137393_1161685713300011271Vadose Zone SoilMHSLLDLPTVQALGEHSTHPCLHASANAWLAAYNLAHQLAFTEAVALRQAGTAWDRAAEPWRRLVEDEPVYELTEVGRRAIQVRC*
Ga0120146_104619113300011992PermafrostPLDLPIVQALSEHDTHPSLRASATAWLAAYDLAHQLGFNEGAALGQADTAWDRAAEPWRLSVGDEPAYTLTEYGRRAIQVRR*
Ga0120157_104710533300011994PermafrostMHSPLDLPIVQALSEHRTHPSLRASANAWLAAYELAHQLGFNEGAALGQADTAWDRAAEPWRLSVGDEPAYTLTEYGRRAIQVRR*
Ga0120148_101564333300011999PermafrostMHSRLDLPIVQALSEHDTHPSLRASATAWLAAYDLAHQLGFNEGAALGQADTAWDRAAEPWRLSVGDEPPYTLTEYGRRAIQVRR*
Ga0120134_100209923300012004PermafrostMHSPLDLPIVQALSEHDTHPSLRASATAWLGAYALAHQFSFTEAVALRQANAAWDRVAQLWHQPLEDETGYELTELGRRAIQVGC*
Ga0120118_101458733300012010PermafrostMHSPLDLPIAQALSEHDTHPSLRASATAWLAAYDLAHQLGFNEGAALGQADTAWDRAAEPWRLSVGDEPAYTLTEYGRRAIQVRR*
Ga0120152_115458513300012011PermafrostMHSPLDLPIVQALSEHDTHPSLRASATAWLAAYDLAHQLAFTEAVALRQADTAWDRAAESWWRPVGDEPFYELTELGRRAVRVRR*
Ga0120139_103727623300012019PermafrostMQSPLDLPTVQGLREHTSHPSLQASATAWLGAYALAHQFSFTEAVALRQANAAWDRVAQLWHQPLEDETGYELTELGRRAIQVGC*
Ga0137389_1045539313300012096Vadose Zone SoilMHSPLDLPIVQALSEHDTHPSLRASATAWLAAYDLAHQLGFNEVAALGQADTAWDRAAEPWRLSGGDEPAYTLTEYGRHAIQVRR*
Ga0137389_1124444223300012096Vadose Zone SoilMHSPLDLPIVQALSEHDTHPSLRASATAWLAAYDLAHQLGFNEGAALGQADTAWDRTAEPWRLSVGDEPAYTLTEYGRRAIQVRP*
Ga0137389_1133279523300012096Vadose Zone SoilMYSPLDLPTVQALSEHDTHPGLRATANAWLAAYDLAHQLGFTDAVALRQADTAWDHAGEPWSLPVGDEPVYTLIECGRRAIQVRR*
Ga0137388_1020859353300012189Vadose Zone SoilMYSPLDLPTVQALSEHDTHPSLRATANAWLAAYDLAHQLGFTDAVALRQADTAWDHAGEPWSLPVGDEPVYTLIECGRRAIQVRR*
Ga0137388_1025666123300012189Vadose Zone SoilMQSPLDLPTAQAVGEHSTHPSLQASATAWLGAYALAHQFSFTEAVALRHADAAWDRVAELWHQPLLDEPDDELTEPGRRAVDLPR*
Ga0137388_1039140523300012189Vadose Zone SoilMQSPLDLPTVQGLREHTSHPSLQASATAWLGAYALAHQFSFTEAVALRQANAAWDRVAQLWHQTLEDETGYELTELGRRAIQVGC*
Ga0137388_1061150623300012189Vadose Zone SoilMHSPLDLPIVQALSEHDTHPSLRASATAWLAAYDLAHQLGFNEGAALGQADTAWDRTAEPWRLSVGDEPAYTLTEYGRRAIQVRR*
Ga0137388_1128005913300012189Vadose Zone SoilMYSPLDLPTVQALSEHDTHPSLRATANAWLAAFDLARQLGFTDAAALRQADTARDHAGEPWRLPVGDEPVYTLTECGRCAIQV
Ga0137388_1199677313300012189Vadose Zone SoilMHSPLDLPTVQALGDYSTHPCLKASANAWLAAYNLAHQLAFTEAVALRQAGTAWDRAAEPWRRPLGDQPVYELTEVGRGAIQVRC*
Ga0137364_1026548423300012198Vadose Zone SoilMHSPLDLPIVQALSEHRTHPSPRASATAWLAAYDLAHQLGFNEGAALGQADTAWDCAAEPWRLSVGDEPAYTLTEFGRRAIQVRR*
Ga0137364_1075235723300012198Vadose Zone SoilMHSLLDLPTVQALGEHSTHPCLQASANAWLAAYHLAHQLAFTEAVALRQAGTAWDRAAEPWCRPVGDEPAYELTEVGRRATQVRC*
Ga0137383_1038585323300012199Vadose Zone SoilMHSPLDLHTVQALNEHDMHPSLRASVNAWLAAYDLAHLLGFTEAAALRQADSAWDRAAEPWRLPVGDEPVYTLTELCRRAIQVRR*
Ga0137383_1081234133300012199Vadose Zone SoilDLPTVQALGEHRTHPCLHASANAWLAAYNLAHQLAFTEAVALRQAGTAWDRAAEPWRRPVGDQPVYELTEVRRRAIQVRC*
Ga0137365_1078089923300012201Vadose Zone SoilMHSPLDLPIVQALSEHDTHPSLRASATAWLAAYDLAHQLGFNEGAALGQADTAWDRAAEPWRPPVGDEPAYTLTEFGRRAIQVRR*
Ga0137365_1085542513300012201Vadose Zone SoilHRTHPCLHATANAWLAAYNLAHQLAFTEAVALRQAGTAWDRAAEQWRGPVGDEPVYELTEVGRRAIQVGC*
Ga0137363_1157279113300012202Vadose Zone SoilLRVRSTHRKPVRCRRAALPAYSLPTDPPGSQEVCMHSPLDLPIVQALSEHDTHPSLRATANAWLAAYDLAHQLGFTDAVALRQADTAWDHADEPWCLPVGDEPVYTLIEGGRRAIQVRR*
Ga0137374_1071549113300012204Vadose Zone SoilMQSPLDLPIVQALGAHGTHPCLQASAKAWLGAYALAHRFSFTESVAQRQADAAWDRVAELWRQPPEDERGYDLTELGRRAIQVRC*
Ga0137362_1115878813300012205Vadose Zone SoilDTQPSLRASATAWLAAYDLAHQLGFNDGAALGQADTAWDRAAEPWRLSVGDEPAYTLTEYGRRAIQVRR*
Ga0137380_1042457523300012206Vadose Zone SoilMHSPLDLPTVQDLGKYSTHPSLQASATAWLGAYALAHQLSFMEAVALRQADAAWDRVAELWHQPLLDEPDDEFTEPGRRAEDPRR*
Ga0137380_1093084313300012206Vadose Zone SoilMHSPLDLPIVQALSEHRTHPSLRASANAWLTAYDLARQLGFNETAALGQADTAWDRAAEPWRLSVGDEPAYTLTEYGRRAIQVRR*
Ga0137380_1141329713300012206Vadose Zone SoilMHSLLDLPTVQALGEHSTHPCLHASANAWLAAYNLAHQLAFTEALALRQAGTAWDRAAEQWRGPVGDEPVYELTEVGRRAIQVGC*
Ga0137376_1116991523300012208Vadose Zone SoilMHPPLDLPTVQALGEHTTHPCLQASANAWLAAYNLVHQLAFTEAVALRQAGTAWDRAAEQWRGPVGDEPVYELTEVSRRAIQVGC*
Ga0137376_1168963713300012208Vadose Zone SoilMHSPLDLPIVQALSEHRTHPSLRASANAWLTAYDLARQLGFNETAALGQADTAWDRAAEPWRLPMAEEPAYT
Ga0137379_1035062443300012209Vadose Zone SoilMHSPLDLPIVQALSEHRTHPSLRASANAWLAAYDLARQLGFNEGAALGQADSARDRAAEPWRLPVGDEPAHTLTEFDRRAIQVRR*
Ga0137379_1066585723300012209Vadose Zone SoilMHSPLDLPIVQALSEHDTHPSLRASATAWLAAYDLAHQLGFNEGAALGQADTAWDRAAEPWRRPVGDEPVYELTEVRRRAIQVRC*
Ga0137379_1085621223300012209Vadose Zone SoilMQSPLDLPTVQAVGERSTHPSLQASATAWLGAYALAHQFSFTEAVALRQADAAWDRVAELWHQPLLDEPDDEFTEPGRRVVDLLR*
Ga0137379_1152741523300012209Vadose Zone SoilMHPPLDLPTVQALGEHTTRPCLQASANAWLAAYHLAHQLAFTEAVALHQASTAWDRAGEPWRRPVEDEPVYESTEVGRRATQVRC*
Ga0137378_1006308033300012210Vadose Zone SoilMHSLLDLPTVQALGEHRTHPCLHASANVWLAAYNLAHQLAFTEAVAMRQAGTAWDRAAEQWRGPVGDEPVYELTEVGRRAIQVGC*
Ga0137378_1016244223300012210Vadose Zone SoilMQSPLDLPTVQAVGEHSTHPSLHASATAWLGAYALAHQFSFTEAVALRQADAAWDRVAELWHQPLLDEPDDEFTEPGRRVVDLLR*
Ga0137378_1043521513300012210Vadose Zone SoilMHSPLDLPIVKALSEHDTHPSLRASATAWLAAYDLAHQLGFNEGAALGQADTAWDRAAEPWRLPAGDEPAYTLTEFGRRAIHVRR*
Ga0137378_1063977623300012210Vadose Zone SoilMHSPLDLPIVQALSEHDTHPSLRATANAWLAAYDLAHQLGFTDAVALRQADTAWDHAGEPWCLPVGDEPVYTLIEGGRRAIQVRR*
Ga0137377_1113766423300012211Vadose Zone SoilMQSPFDLPTVQAVGEQSTDPSLKASASAWLGAYALAHQLSFTEAVALRQADAAWDRVAELWHQPLLDEPDDEFTEPGRRVVDLLR*
Ga0137387_1064361523300012349Vadose Zone SoilMHSPLDLPIVQALSEHRTHPSLRASANAWLTAYDLARQLGFNETAALGQADTAWDRAAEPWRLPAGDEPAYTLTEFGRRAIHVRR*
Ga0137386_1024656133300012351Vadose Zone SoilMHSPLDLPIVQALSEHRTHPSLRASANAWLAAYDLAHQLGFNEGAALGQADTAWDRAAEPWRLSVGDEPAYTLTEYGRRAIQVRR*
Ga0137386_1065099413300012351Vadose Zone SoilMQSPLDLPTVQAVVEHSTYPSLQASATAWLGAYALAHQFSFTEAVALRQADAAWDRVAELWHQPQLDEPDDEFTEPGRRAEDPRR*
Ga0137371_1033597623300012356Vadose Zone SoilMHSPLDLPIVQALSEHDTQPSLRASATAWLAAYDLAHQLGFNDGAALGQADTAWDRAAEPWRLSVGDEPAYPLTEYGRRAIQVRR*
Ga0137384_1012072723300012357Vadose Zone SoilMQSPLDLPTVQAVGERSTHPSLQASATAWLGAYALAHQCSFTEAVALRQADAAWDRVAELWHQPLLDEPDDEFTEPGRRVVDLLR*
Ga0137384_1049395733300012357Vadose Zone SoilMHSPLDLPIVQALSEHDTHPSLRASATAWLAAYDLAHQLGFNEGAALSQADTAWDRAAEPWRVPMAEEPAYTVTELGRRAIQVRP*
Ga0137384_1089936613300012357Vadose Zone SoilKEVCMQSPLDLPTVQGLREQTSHPSLQASATAWLGAYALAHQFSFTEAVALRQANAAWDRVAQLWHQPLEDETAYELTELGRRAIQVGC*
Ga0137385_1065415623300012359Vadose Zone SoilMHSPLDLPIVQALSEHDTQPSLRASATAWLAAYDLAHQLGFNDGAALGQADTAWDRAAEPWRLSVGDEPAYTLTEYGRRAIQVRR*
Ga0137385_1164238813300012359Vadose Zone SoilPKGCRRSACSHHLTCPRPKQAVVEHSTYPSLQASATAWLGAYALAHQFSFTEAVALRQADAAWDRVAELWHQPQLDEPDDEFTEPGRRAEDPRR*
Ga0137375_1137754023300012360Vadose Zone SoilVQGLREHTSHPSLQASATAWLGAYALAHQFSFTEAVALRQANAAWDRVAQLWHQPQGDETGYELTELGRRAIQVRC*
Ga0137390_1018917843300012363Vadose Zone SoilMYSRLDLPIVQALSEHNTNPSLRASANAWLAAYELAHQFSFTETVALRQANAAWDRVAQLRHQPPEDETGYELTELGRRAIQVGC*
Ga0137390_1076756223300012363Vadose Zone SoilMQSPLDLPTAQAVGEHSTHPSLQASATAWLGAYALAHQFSFTEAVALRHADAAWDRVAELWHQPLLDEPDDELTEPGRRPVDLPR*
Ga0137390_1137510413300012363Vadose Zone SoilMQALSEHTTHPSLQASATAWLAAYDLAHQLAFTEAVALRQADTAWDRAAESWCRPVGDEPFYELTELGRRAVRVRR*
Ga0137390_1178036123300012363Vadose Zone SoilMYSPLDLPTVQALSEHDTHPSLRATATAWLAAYDLAHQLGFTDAVALRQADTAWDHADEPWCLPVGDEPVYTLIEGGRRAIQVRR*
Ga0137373_1040572813300012532Vadose Zone SoilMHSPLDLPTVQALGEYSTHPSLQASANAWLAAYDAAHQLAFTEAVALRQACAAWDRAAETWRRCVGDEAGHDPTQSDRRFTEFGREDVCGARPEF*
Ga0137395_1037177713300012917Vadose Zone SoilMHSPLDLPIVQALSEHDTHPSLRATANAWLAAYDLAHQLGFTDAVALRQADTAWDHAGEPWCLPVGDERFTH*
Ga0137395_1057438833300012917Vadose Zone SoilMHSPLDLPTVQALGDYSTHPCLKASANAWLAAYNLAHQLAFTEAVALRQAGTAWDRVAESWRKPVGDEPVYELTEVGRRAIQVRC*
Ga0137407_1173540423300012930Vadose Zone SoilEVCMHSPLDLPIVQALSEHDTHPSLRASATAWLAAYDLAHQLGFNEGAALGQADTAWDRAAEPWRLSVGDEPAYTLTEYGRRAIQVRR*
Ga0137410_1101327623300012944Vadose Zone SoilMHSPLDLPIVQALSEHRTHPSLRASANAWLAAYELAHQLGFNEAAALGQADTAWDRAAEPWRLPAGDEPAYALTEFGRRAIHVRR*
Ga0120154_101938543300013501PermafrostMHSPLDLPIVQALSGHRTHPSLQASANAWLAAYELAHQLGFNEGAALGQADTAWDRAAEPWRLSVGDEPAYTLTEYGRRAIQVRR*
Ga0120154_107492613300013501PermafrostMLHAPLDLPTVHALDAPTTHPSLQASANAWSGAHALAPQFSFTEAVALRQANAAWDRVAQLWHQAQGDETDYELTELGRRAI
Ga0120147_101710613300013758PermafrostMQALSEHTTHPSLQASATAWLAAYDLAHQLGFNEGAALGQADTAWDRAAEPWRLSVRDEPAYTLTEYGRRAIQVRR*
Ga0120111_102284823300013764PermafrostMHSPLDLPIVQALSKHRTHPSLRASANAWLAAYDLAHQLGFNEGAALGQADTAWDRAAEPWRLSVGDEPAYTLTEYGRRAIQVRR*
Ga0120111_110299413300013764PermafrostMQALSEHTTHPSLQASATAWLAAYDLAHQLAFTEAVALRQADTAWDRAAESWGRPVGDEPFYELTELGRRAVRVRR*
Ga0120181_101552943300013766PermafrostMHSPLDLPIVQALSEHDTHPSLRASATAWLAAYDLAHQLGFNEGAALGQADTAWDRAAEPWRLSVGDEPPYTLTEYGRRAIQVRR*
Ga0120158_1030398423300013772PermafrostMHSPLDLSTMQALSEHTTHPSLQASATAWLAAYDLAHQLAFTEAVALRQADTAWDRAAESRCRPVGDEPFYELTELGRRAVRVRR*
Ga0120126_100430413300013831PermafrostMQSPLDLPTVQAVGEHSTHPSLQASATAWWGAYALAHQRSFTEAVALRQANAAWDRVAQLWHQPLEDETGYELTELGRRAIQVGC*
Ga0120109_105250343300014052PermafrostVCMHSPLDLPIVQALSEHRTHPSLRASANAWLAAYELAHQFSFTETVALRQANAAWDRVAQLWHQPLEDETGYELTELGRRAIQVGC*
Ga0120125_103075923300014056PermafrostMQSPLDLPTVQGLREHTSHPSLQASATAWLGAYALAHQFSFTEAVALRQANAAWDRVAQLWHQPLEDEAGYELTELGRRAIQVGC*
Ga0120149_103232833300014058PermafrostMHSPLDLPIVQALSEHDTDPSLRASATAWLAAYDLAHQLGFNEGAALGQADTAWDRAAEPWRLSVGDEPAYTLTEYGRRAIQVRR*
Ga0066662_1251394213300018468Grasslands SoilMHSPLDLPIVQALSKHRTHPSLRASANAWLAAYDLAHQLGFNEGAALGQADTAWDRAAEPWRLPAGDEPAYSLTEFGRRAIQVRR
Ga0213853_1140681733300021861WatershedsMHSPLDLPIVQALSEHDTDPSLRASATAWLAAYDLAHQLGFSETAALGQADTAWDRAAEPWRLSVGDEPAYTLTEYGRRAIQVRR
Ga0207684_1025632023300025910Corn, Switchgrass And Miscanthus RhizosphereMQSPLDVPTVQAVGERSTHPSLQASATAWLGAYALAHQFSFTEAAALRQADAAWDRVAELWQQPLRDEPDDEFTEPGRRAVDLLR
Ga0207684_1056560023300025910Corn, Switchgrass And Miscanthus RhizosphereMHSPLDLPIVQALSEHDTHPSLRASATAWLAAYDLAHQLGFNEGAALGQADTAWDRAAEPWRLSVGDEPAYTLTEFGRRAIQVRR
Ga0207646_1060022813300025922Corn, Switchgrass And Miscanthus RhizosphereMHSPFDLPIVQALSEHRTHPSLRASANAWLAAYDLARQLGFNETAALGQADTAWDRAAEPWRVPMAEEPAYTLTEYGRRAIQVRR
Ga0207646_1072276123300025922Corn, Switchgrass And Miscanthus RhizosphereMQSPLDVPTVQAVGERSTHPSLQASATAWLGAYALAHQFSFTEAVARRQADAAWDRVAELWQQPLRDEPDDEFTEPGRRAVDLLR
Ga0207687_1191724623300025927Miscanthus RhizosphereMHSPLDQPIVQALSEHDTHPSLRASATAWLAAYDLAHQLGFNEGAALGQADTAWDRAAEPWRLSVGDEPAYALTEYG
Ga0207665_1115307323300025939Corn, Switchgrass And Miscanthus RhizosphereMHSPLDLPIVQALSEHDTHPSLRASATAWLAAYDLAHQLGFNEGAALGQADTAWDRAAEPWRVPMAEEPAYTVTELGRRAIQVRP
Ga0207703_1183493523300026035Switchgrass RhizosphereMHSPLDQPIVQGLSEHDTHPSLRASATAWLAAYDLAHQLGFNEGAALGQADTAWDRAAEPWRLSVGDEPSYTLTEYGRRAIQVRR
Ga0209219_107898923300027565Forest SoilMHSPLDLPIVQALSEHDTHPSLRASATAWLAAYDLAHQLGFNEGAALGQADTAWDRAAEPWRLSVGDEPAYTLTEYGRRAIQVRR
Ga0209011_102335813300027678Forest SoilSTHRKPVRCRRAALPAYSLPTDPPGSQEVCMHSPLDLPIVQALSEHDTHPSLRASATAWLAAYDLAHQLGFNEGAALGQADTAWDRAAEPWRLSVGDEPAYTLTEYGRRAIQVRR
Ga0209701_1031679223300027862Vadose Zone SoilMHSPLDLLIVQALSEHDTHPSLRASATAWLAAYDLAHQLGFNEGAALGQADTAWDRAAEPWRVPMAEEPAYTVTELGRRAIQVRP
Ga0209701_1037835113300027862Vadose Zone SoilMYSPLDLPTVQALSEHDTHPSLRATANAWLAAYDLAHQLGFTDAVALRQADTAWDHADEPWCLPVGDEPVYTLIEGGRRAIQVRR
Ga0209283_1059169213300027875Vadose Zone SoilMHSPLDLLIVQALSEHDTHPSLRASATAWLAAYDLAHQLGFNEGAALGQADTAWDRTAEPWRLSVGDEPAYTLTEYGRHAIQVRR
Ga0209283_1079221023300027875Vadose Zone SoilYSTHPCLQASANAWLAAYNLAHQLAFTEAVALRQAGTAWDRAAEPWRRPVGDEPVYELTEVGRHAIQVRC
Ga0209283_1084476923300027875Vadose Zone SoilMHSPLDLSTMQALSEHTTHPSLQASAGAWLAAYDLAHQLAFTEAVALRQADTAWDRAAESWCRPVGDEPFYELTELGRRAVRVRR
Ga0209526_1029621623300028047Forest SoilMHSPLDLPIVQALSEHDTHPSLRASATAWLAAYDLAHQLGFNEGAALGQADTAWDRAAEPWRLSAGDEPAYTLTEYGRRAIQVRR
Ga0137415_1058300813300028536Vadose Zone SoilMHSPLDLPIVQALSEHDTHPSLRASATTWLAAFDLAQQLGFNDGAALGQADTAWDRAAEPWRRPVGDEPINELTEVSRRAIEVRC
Ga0222749_1056370923300029636SoilMHSPLDLLSVQALSEHHAHPSLRASATAWLAAYDLAHQLGFNEGAALGQADTAWDRAAEPWRVPMAEEPAYTVTEYGRRAIQVRR


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.