Metagenome / Metatranscriptome Family F053879

Basic Information
Family ID	F053879
Family Type	Metagenome / Metatranscriptome
Number of Sequences	140
Average Sequence Length	41 residues
Representative Sequence	GKMAYATKINFDKKKNNIELENYSSEPVRLNNLTLEVKK
Number of Associated Samples	113
Number of Associated Scaffolds	140

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	3.57 %
% of genes near scaffold ends (potentially truncated)	95.00 %
% of genes from short scaffolds (< 2000 bps)	90.00 %
Associated GOLD sequencing projects	107
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.39

Most Common Taxonomy
Group	Bacteria (63.571 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (12.857 % of family members)
Environment Ontology (ENVO)	Unclassified (41.429 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (52.143 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 25.37% Coil/Unstructured: 74.63%
Feature Viewer

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Pfam ID	Name	% Frequency in 140 Family Scaffolds
PF13590	DUF4136	7.86
PF00375	SDF	4.29
PF12704	MacB_PCD	2.14
PF01925	TauE	2.14
PF09865	DUF2092	1.43
PF06283	ThuA	1.43
PF13505	OMP_b-brl	1.43
PF14023	DUF4239	1.43
PF08031	BBE	1.43
PF07228	SpoIIE	1.43
PF14417	MEDS	1.43
PF00497	SBP_bac_3	1.43
PF16912	Glu_dehyd_C	1.43
PF03976	PPK2	1.43
PF13517	FG-GAP_3	0.71
PF07969	Amidohydro_3	0.71
PF00248	Aldo_ket_red	0.71
PF00076	RRM_1	0.71
PF03219	TLC	0.71
PF01654	Cyt_bd_oxida_I	0.71
PF01965	DJ-1_PfpI	0.71
PF07638	Sigma70_ECF	0.71
PF02518	HATPase_c	0.71
PF14100	DUF6807	0.71
PF08240	ADH_N	0.71
PF01103	Omp85	0.71
PF13442	Cytochrome_CBB3	0.71
PF13492	GAF_3	0.71
PF12833	HTH_18	0.71
PF02954	HTH_8	0.71
PF02368	Big_2	0.71
PF13360	PQQ_2	0.71
PF00665	rve	0.71
PF02900	LigB	0.71
PF07796	DUF1638	0.71
PF03781	FGE-sulfatase	0.71
PF01734	Patatin	0.71
PF04338	DUF481	0.71
PF13426	PAS_9	0.71
PF03795	YCII	0.71
PF00196	GerE	0.71
PF05193	Peptidase_M16_C	0.71
PF02604	PhdYeFM_antitox	0.71
PF13191	AAA_16	0.71
PF00072	Response_reg	0.71

COG ID	Name	Functional Category	% Frequency in 140 Family Scaffolds
COG0730	Sulfite exporter TauE/SafE/YfcA and related permeases, UPF0721 family	Inorganic ion transport and metabolism [P]	2.14
COG4813	Trehalose utilization protein	Carbohydrate transport and metabolism [G]	1.43
COG0277	FAD/FMN-containing lactate dehydrogenase/glycolate oxidase	Energy production and conversion [C]	1.43
COG2326	Polyphosphate kinase 2, PPK2 family	Energy production and conversion [C]	1.43
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.71
COG1752	Predicted acylesterase/phospholipase RssA, containd patatin domain	General function prediction only [R]	0.71
COG2161	Antitoxin component YafN of the YafNO toxin-antitoxin module, PHD/YefM family	Defense mechanisms [V]	0.71
COG1271	Cytochrome bd-type quinol oxidase, subunit 1	Energy production and conversion [C]	0.71
COG2350	YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHis	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.71
COG2801	Transposase InsO and inactivated derivatives	Mobilome: prophages, transposons [X]	0.71
COG2826	Transposase and inactivated derivatives, IS30 family	Mobilome: prophages, transposons [X]	0.71
COG3137	Putative salt-induced outer membrane protein YdiY	Cell wall/membrane/envelope biogenesis [M]	0.71
COG3202	ATP/ADP translocase	Energy production and conversion [C]	0.71
COG3316	Transposase (or an inactivated derivative), DDE domain	Mobilome: prophages, transposons [X]	0.71
COG3621	Patatin-like phospholipase/acyl hydrolase, includes sporulation protein CotR	General function prediction only [R]	0.71
COG4118	Antitoxin component of toxin-antitoxin stability system, DNA-binding transcriptional repressor	Defense mechanisms [V]	0.71
COG4584	Transposase	Mobilome: prophages, transposons [X]	0.71
COG4667	Predicted phospholipase, patatin/cPLA2 family	Lipid transport and metabolism [I]	0.71
COG1262	Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain	Posttranslational modification, protein turnover, chaperones [O]	0.71

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	63.57 %
Unclassified	root	N/A	36.43 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	63.57 %
Unclassified	root	N/A	36.43 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	63.57 %
Unclassified	root	N/A	36.43 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.43 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	25.00 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.57 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	2.14 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.43 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	1.43 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.43 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	10.71 %
Vicinamibacteria	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria	5.71 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	2.14 %
unclassified Nitrospirae	no rank	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae	1.43 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1.43 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.43 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.71 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.71 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.71 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.43 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.71 %
Vicinamibacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales	5.71 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2.14 %
Nitrospirae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	1.43 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.43 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.71 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.71 %
Patescibacteria group	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group	0.71 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	0.71 %
Phycisphaerae	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae	0.71 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.43 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.71 %
Vicinamibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae	5.71 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	2.14 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	1.43 %
Nitrospirae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	1.43 %
Parcubacteria group	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group	0.71 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	0.71 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.71 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.71 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.71 %
Phycisphaerae	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.43 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.71 %
Luteitalea	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea	5.71 %
Sorangiineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae	2.14 %
Ralstonia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Ralstonia	1.43 %
Nitrospirae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	1.43 %
Verrucomicrobia subdivision 3	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3	0.71 %
Candidatus Yanofskybacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Yanofskybacteria	0.71 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.71 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.71 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.71 %
Phycisphaerae	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.43 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.71 %
Luteitalea pratensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	2.86 %
Polyangiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae	2.14 %
unclassified Luteitalea	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea	1.43 %
Ralstonia pseudosolanacearum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Ralstonia → Ralstonia pseudosolanacearum	1.43 %
Nitrospirae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	1.43 %
Pedosphaera	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera	0.71 %
Candidatus Yanofskybacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Yanofskybacteria	0.71 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.71 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.71 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.71 %
Phycisphaerae	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.43 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.71 %
Luteitalea pratensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	2.86 %
Sorangium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → Sorangium	2.14 %
Luteitalea sp. TBR-22	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp. TBR-22	1.43 %
Ralstonia pseudosolanacearum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Ralstonia → Ralstonia pseudosolanacearum	1.43 %
Nitrospirae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	1.43 %
Pedosphaera parvula	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	0.71 %
Candidatus Yanofskybacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Yanofskybacteria	0.71 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.71 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.71 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.71 %
Phycisphaerae	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.43 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.71 %
Luteitalea pratensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	2.86 %
Sorangium cellulosum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → Sorangium → Sorangium cellulosum	2.14 %
Luteitalea sp. TBR-22	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp. TBR-22	1.43 %
Ralstonia pseudosolanacearum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Ralstonia → Ralstonia pseudosolanacearum	1.43 %
Nitrospirae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	1.43 %
Pedosphaera parvula	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	0.71 %
Candidatus Yanofskybacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Yanofskybacteria	0.71 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.71 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.71 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.71 %
Phycisphaerae	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae	0.71 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090005\|LWSO_GLQAYWI02IU2PI	Not Available	525	Open in IMG/M
2140918013\|NODE_2492_length_1017_cov_10.654867	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1049	Open in IMG/M
3300000955\|JGI1027J12803_102435890	All Organisms → cellular organisms → Bacteria	805	Open in IMG/M
3300000956\|JGI10216J12902_113396729	Not Available	669	Open in IMG/M
3300004081\|Ga0063454_101660613	Not Available	554	Open in IMG/M
3300004114\|Ga0062593_102009607	Not Available	642	Open in IMG/M
3300004114\|Ga0062593_102754477	Not Available	560	Open in IMG/M
3300004156\|Ga0062589_101163496	All Organisms → cellular organisms → Bacteria	735	Open in IMG/M
3300005093\|Ga0062594_100724180	All Organisms → cellular organisms → Bacteria	903	Open in IMG/M
3300005330\|Ga0070690_100322394	All Organisms → cellular organisms → Bacteria	1114	Open in IMG/M
3300005337\|Ga0070682_102006186	Not Available	509	Open in IMG/M
3300005338\|Ga0068868_101376041	All Organisms → cellular organisms → Bacteria → Acidobacteria	658	Open in IMG/M
3300005345\|Ga0070692_10941036	All Organisms → cellular organisms → Bacteria	600	Open in IMG/M
3300005345\|Ga0070692_11107039	All Organisms → cellular organisms → Bacteria → Acidobacteria	559	Open in IMG/M
3300005367\|Ga0070667_100824242	Not Available	862	Open in IMG/M
3300005459\|Ga0068867_100003584	All Organisms → cellular organisms → Bacteria	10921	Open in IMG/M
3300005543\|Ga0070672_100272242	All Organisms → cellular organisms → Bacteria	1430	Open in IMG/M
3300005543\|Ga0070672_100584016	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	972	Open in IMG/M
3300005546\|Ga0070696_101147019	Not Available	655	Open in IMG/M
3300005718\|Ga0068866_10098875	All Organisms → cellular organisms → Bacteria	1606	Open in IMG/M
3300005719\|Ga0068861_102310004	All Organisms → cellular organisms → Bacteria	540	Open in IMG/M
3300005764\|Ga0066903_100025849	All Organisms → cellular organisms → Bacteria	6461	Open in IMG/M
3300005834\|Ga0068851_10594152	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → Sorangium → Sorangium cellulosum	673	Open in IMG/M
3300005843\|Ga0068860_100779268	Not Available	969	Open in IMG/M
3300006046\|Ga0066652_101097261	Not Available	754	Open in IMG/M
3300006844\|Ga0075428_100006867	All Organisms → cellular organisms → Bacteria	12646	Open in IMG/M
3300006846\|Ga0075430_100073521	All Organisms → cellular organisms → Bacteria	2866	Open in IMG/M
3300006880\|Ga0075429_101749977	Not Available	539	Open in IMG/M
3300006881\|Ga0068865_101849056	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	546	Open in IMG/M
3300007004\|Ga0079218_10205553	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1507	Open in IMG/M
3300007004\|Ga0079218_10684187	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	958	Open in IMG/M
3300009094\|Ga0111539_11128367	All Organisms → cellular organisms → Bacteria	911	Open in IMG/M
3300009098\|Ga0105245_12672958	All Organisms → cellular organisms → Bacteria	552	Open in IMG/M
3300009100\|Ga0075418_13139037	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae	503	Open in IMG/M
3300009157\|Ga0105092_10234518	Not Available	1029	Open in IMG/M
3300009167\|Ga0113563_11730927	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Yanofskybacteria	742	Open in IMG/M
3300009176\|Ga0105242_10966729	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	857	Open in IMG/M
3300009177\|Ga0105248_11244174	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	842	Open in IMG/M
3300009177\|Ga0105248_11461136	Not Available	774	Open in IMG/M
3300010037\|Ga0126304_10402762	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	914	Open in IMG/M
3300010038\|Ga0126315_10443147	Not Available	821	Open in IMG/M
3300010399\|Ga0134127_12440725	Not Available	602	Open in IMG/M
3300010401\|Ga0134121_10536847	All Organisms → cellular organisms → Bacteria	1084	Open in IMG/M
3300010403\|Ga0134123_11593987	Not Available	700	Open in IMG/M
3300011119\|Ga0105246_11043520	Not Available	743	Open in IMG/M
3300012021\|Ga0120192_10093702	All Organisms → cellular organisms → Bacteria	599	Open in IMG/M
3300012212\|Ga0150985_108937052	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	856	Open in IMG/M
3300012469\|Ga0150984_115317228	Not Available	542	Open in IMG/M
3300012502\|Ga0157347_1051488	Not Available	569	Open in IMG/M
3300012895\|Ga0157309_10316463	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	532	Open in IMG/M
3300012958\|Ga0164299_11616962	Not Available	511	Open in IMG/M
3300012960\|Ga0164301_10169626	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1358	Open in IMG/M
3300012984\|Ga0164309_11452316	All Organisms → cellular organisms → Bacteria → Acidobacteria	586	Open in IMG/M
3300013308\|Ga0157375_11023780	Not Available	965	Open in IMG/M
3300013308\|Ga0157375_11780304	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → Sorangium → Sorangium cellulosum	730	Open in IMG/M
3300014272\|Ga0075327_1168897	Not Available	688	Open in IMG/M
3300014326\|Ga0157380_10722404	All Organisms → cellular organisms → Bacteria → Acidobacteria	1004	Open in IMG/M
3300014326\|Ga0157380_11633608	All Organisms → cellular organisms → Bacteria	701	Open in IMG/M
3300015200\|Ga0173480_10005925	All Organisms → cellular organisms → Bacteria → Acidobacteria	4800	Open in IMG/M
3300015371\|Ga0132258_10052349	All Organisms → cellular organisms → Bacteria → Acidobacteria	9349	Open in IMG/M
3300015371\|Ga0132258_13316246	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea	1108	Open in IMG/M
3300015372\|Ga0132256_100012352	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	7422	Open in IMG/M
3300015373\|Ga0132257_100646282	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1310	Open in IMG/M
3300015373\|Ga0132257_104343634	Not Available	516	Open in IMG/M
3300015374\|Ga0132255_101953649	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea	893	Open in IMG/M
3300016341\|Ga0182035_11900400	All Organisms → cellular organisms → Bacteria	540	Open in IMG/M
3300018469\|Ga0190270_11201764	All Organisms → cellular organisms → Bacteria	796	Open in IMG/M
3300018469\|Ga0190270_11636194	Not Available	696	Open in IMG/M
3300018469\|Ga0190270_12783581	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	552	Open in IMG/M
3300018476\|Ga0190274_10047472	All Organisms → cellular organisms → Bacteria	3078	Open in IMG/M
3300018476\|Ga0190274_13303103	Not Available	543	Open in IMG/M
3300018481\|Ga0190271_13220181	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Ralstonia → Ralstonia pseudosolanacearum	547	Open in IMG/M
3300020016\|Ga0193696_1072048	All Organisms → cellular organisms → Bacteria	900	Open in IMG/M
3300022213\|Ga0224500_10022473	All Organisms → cellular organisms → Bacteria → Acidobacteria	2691	Open in IMG/M
3300022756\|Ga0222622_11206878	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	557	Open in IMG/M
3300022892\|Ga0247753_1010231	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	958	Open in IMG/M
3300023169\|Ga0247762_1228490	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Ralstonia → Ralstonia pseudosolanacearum	526	Open in IMG/M
3300025903\|Ga0207680_11190695	Not Available	543	Open in IMG/M
3300025920\|Ga0207649_10662321	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	807	Open in IMG/M
3300025925\|Ga0207650_10675855	All Organisms → cellular organisms → Bacteria	871	Open in IMG/M
3300025925\|Ga0207650_10965135	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	725	Open in IMG/M
3300025926\|Ga0207659_10664292	Not Available	891	Open in IMG/M
3300025926\|Ga0207659_10718752	Not Available	856	Open in IMG/M
3300025926\|Ga0207659_11645516	Not Available	547	Open in IMG/M
3300025932\|Ga0207690_10636884	Not Available	873	Open in IMG/M
3300025937\|Ga0207669_10848969	All Organisms → cellular organisms → Bacteria → Acidobacteria	760	Open in IMG/M
3300025940\|Ga0207691_10303648	All Organisms → cellular organisms → Bacteria	1371	Open in IMG/M
3300025942\|Ga0207689_10320239	All Organisms → cellular organisms → Bacteria	1287	Open in IMG/M
3300025942\|Ga0207689_10467298	All Organisms → cellular organisms → Bacteria	1055	Open in IMG/M
3300025960\|Ga0207651_10358256	Not Available	1230	Open in IMG/M
3300025960\|Ga0207651_11092671	Not Available	715	Open in IMG/M
3300025972\|Ga0207668_10108261	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2080	Open in IMG/M
3300025986\|Ga0207658_10188150	All Organisms → cellular organisms → Bacteria	1714	Open in IMG/M
3300025986\|Ga0207658_10951571	Not Available	783	Open in IMG/M
3300026023\|Ga0207677_10468878	All Organisms → cellular organisms → Bacteria	1082	Open in IMG/M
3300026035\|Ga0207703_10499199	All Organisms → cellular organisms → Bacteria	1142	Open in IMG/M
3300026088\|Ga0207641_11232609	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → Sorangium → Sorangium cellulosum	748	Open in IMG/M
3300026088\|Ga0207641_11707577	All Organisms → cellular organisms → Bacteria	631	Open in IMG/M
3300026089\|Ga0207648_10010178	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	8943	Open in IMG/M
3300026089\|Ga0207648_11694683	All Organisms → cellular organisms → Bacteria	594	Open in IMG/M
3300026089\|Ga0207648_12195656	Not Available	513	Open in IMG/M
3300027675\|Ga0209077_1091066	Not Available	843	Open in IMG/M
3300027909\|Ga0209382_10066081	All Organisms → cellular organisms → Bacteria	4279	Open in IMG/M
3300027909\|Ga0209382_10069754	All Organisms → cellular organisms → Bacteria → Acidobacteria	4155	Open in IMG/M
3300027909\|Ga0209382_12141083	All Organisms → cellular organisms → Bacteria	531	Open in IMG/M
3300028380\|Ga0268265_12170535	Not Available	562	Open in IMG/M
3300028381\|Ga0268264_10817213	All Organisms → cellular organisms → Bacteria	932	Open in IMG/M
3300028782\|Ga0307306_10085257	Not Available	827	Open in IMG/M
3300031170\|Ga0307498_10470705	Not Available	508	Open in IMG/M
3300031226\|Ga0307497_10292616	All Organisms → cellular organisms → Bacteria → Acidobacteria	744	Open in IMG/M
3300031716\|Ga0310813_10771326	Not Available	863	Open in IMG/M
3300031724\|Ga0318500_10541841	All Organisms → cellular organisms → Bacteria	587	Open in IMG/M
3300031847\|Ga0310907_10260691	Not Available	857	Open in IMG/M
3300031852\|Ga0307410_10658861	Not Available	879	Open in IMG/M
3300031854\|Ga0310904_10739678	All Organisms → cellular organisms → Bacteria	683	Open in IMG/M
3300031854\|Ga0310904_10856467	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	639	Open in IMG/M
3300031908\|Ga0310900_11757706	All Organisms → cellular organisms → Bacteria	527	Open in IMG/M
3300031912\|Ga0306921_10553033	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp. TBR-22	1335	Open in IMG/M
3300031940\|Ga0310901_10558421	Not Available	520	Open in IMG/M
3300031943\|Ga0310885_10307694	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	821	Open in IMG/M
3300031944\|Ga0310884_10556041	Not Available	680	Open in IMG/M
3300031944\|Ga0310884_10774348	Not Available	585	Open in IMG/M
3300031995\|Ga0307409_100700677	Not Available	1012	Open in IMG/M
3300032000\|Ga0310903_10092541	Not Available	1270	Open in IMG/M
3300032013\|Ga0310906_10411716	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	896	Open in IMG/M
3300032013\|Ga0310906_11449536	All Organisms → cellular organisms → Bacteria	505	Open in IMG/M
3300032017\|Ga0310899_10107979	Not Available	1134	Open in IMG/M
3300032043\|Ga0318556_10626446	All Organisms → cellular organisms → Bacteria	561	Open in IMG/M
3300032075\|Ga0310890_10057632	All Organisms → cellular organisms → Bacteria → Acidobacteria	2255	Open in IMG/M
3300032144\|Ga0315910_10641463	Not Available	824	Open in IMG/M
3300032144\|Ga0315910_11271249	Not Available	575	Open in IMG/M
3300032179\|Ga0310889_10357325	All Organisms → cellular organisms → Bacteria → Acidobacteria	717	Open in IMG/M
3300032256\|Ga0315271_11266055	All Organisms → cellular organisms → Bacteria	637	Open in IMG/M
3300033418\|Ga0316625_101788224	Not Available	596	Open in IMG/M
3300033482\|Ga0316627_101778832	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	633	Open in IMG/M
3300033488\|Ga0316621_10930373	All Organisms → cellular organisms → Bacteria	644	Open in IMG/M
3300033551\|Ga0247830_10942507	Not Available	688	Open in IMG/M
3300034120\|Ga0335056_0296469	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp. TBR-22	898	Open in IMG/M
3300034420\|Ga0373918_0142929	All Organisms → cellular organisms → Bacteria	618	Open in IMG/M
3300034659\|Ga0314780_185228	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	535	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	53.57%
Host-Associated	Host-Associated	45.71%
Engineered	Engineered	0.71%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	47.86%
Plants	Host-Associated → Plants	45.71%
Aquatic	Environmental → Aquatic	5.71%
Bioremediation	Engineered → Bioremediation	0.71%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	47.14%
Rhizosphere	Host-Associated → Plants → Rhizosphere	27.86%
Rhizoplane	Host-Associated → Plants → Rhizoplane	17.14%
Freshwater	Environmental → Aquatic → Freshwater	4.29%
Marine	Environmental → Aquatic → Marine	0.71%
Sediment	Environmental → Aquatic → Sediment	0.71%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.71%
Roots	Host-Associated → Plants → Roots	0.71%
Metal	Engineered → Bioremediation → Metal	0.71%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	39.29%
Soil	Host-Associated → Plants → Rhizosphere → Soil	14.29%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	13.57%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	12.86%
Loam	Environmental → Terrestrial → Soil → Loam	5.00%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	4.29%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.86%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.43%
Lake	Environmental → Aquatic → Freshwater → Lake	1.43%
Lentic	Environmental → Aquatic → Freshwater → Lentic	0.71%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.71%
Sediment	Environmental → Aquatic → Marine → Sediment	0.71%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.71%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.71%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.71%
Unclassified	Engineered → Bioremediation → Metal → Unclassified	0.71%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	17.14%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	14.29%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	13.57%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	12.86%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	11.43%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	5.00%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	4.29%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.57%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.86%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.86%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.86%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.43%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	0.71%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	0.71%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.71%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.71%
Unclassified	Environmental → Aquatic → Marine → Sediment → Unclassified	0.71%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.71%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.71%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.71%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.71%
Unclassified	Host-Associated → Plants → Roots → Rhizosphere → Unclassified	0.71%
Unclassified	Engineered → Bioremediation → Metal → Unclassified → Unclassified	0.71%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	12.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	11.43%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	7.14%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	6.43%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.71%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	5.00%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	5.00%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	3.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.86%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.14%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.14%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.14%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.14%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	1.43%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	1.43%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.43%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.43%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.43%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.43%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.43%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.43%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.43%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.43%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Sediment	0.71%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	0.71%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	0.71%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.71%
Sediment	Environmental → Aquatic → Marine → Sediment → Unclassified → Sediment	0.71%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.71%
Terrestrial	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial	0.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.71%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.71%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.71%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.71%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.71%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.71%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.71%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.71%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.71%
Arabidopsis Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Unclassified → Arabidopsis Rhizosphere	0.71%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.71%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.71%
Sediment Slurry	Engineered → Bioremediation → Metal → Unclassified → Unclassified → Sediment Slurry	0.71%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090005	Sediment microbial communities from Lake Washington, Seattle, for Methane and Nitrogen Cycles, original sample replicate 1	Environmental	Open in IMG/M
2140918013	Soil microbial communities from Great Prairies - Iowa soil (MSU Assemblies)	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005834	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009157	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009167	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG - Illumina Assembly (version 2)	Environmental	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012021	Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - T1	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012502	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.2.yng.040610	Host-Associated	Open in IMG/M
3300012895	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S208-509C-2	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014272	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_CattailB_D1	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300020016	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3m1	Environmental	Open in IMG/M
3300022213	Sediment microbial communities from San Francisco Bay, California, United States - SF_Oct11_sed_USGS_4_1	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300022892	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S169-409R-5	Environmental	Open in IMG/M
3300023169	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L081-202R-4	Environmental	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027675	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028782	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_193	Environmental	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031847	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4	Environmental	Open in IMG/M
3300031852	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3	Host-Associated	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031940	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D2	Environmental	Open in IMG/M
3300031943	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2	Environmental	Open in IMG/M
3300031944	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1	Environmental	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300032000	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D3	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032017	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D4	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032144	Garden soil microbial communities collected in Santa Monica, California, United States - Edamame soil	Environmental	Open in IMG/M
3300032179	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2	Environmental	Open in IMG/M
3300032256	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_top	Environmental	Open in IMG/M
3300033418	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_T1_C1_D1_A	Environmental	Open in IMG/M
3300033482	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D1_C	Environmental	Open in IMG/M
3300033488	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_OW2_C1_D1_C	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M
3300034120	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME07Aug2014-rr0172	Environmental	Open in IMG/M
3300034420	Uranium-contaminated sediment microbial communities from bioreactor in Oak Ridge, Tennessee, United States - A1A4.1	Engineered	Open in IMG/M
3300034659	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60R1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.39
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.39
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F053879

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
LWSO_04183240	2088090005	Freshwater Sediment	EMRFGADGKGEGRMAYMTQINFSKKTNTVELENYSSEAVRLNELRLEVRK
Iowa-Corn-GraphCirc_02648000	2140918013	Soil	DKAGNGEGKMAYGTQILFDKKKNNIVLENYSSEPVRLNQLKLEVRK
JGI1027J12803_1024358902	3300000955	Soil	KMSVATKISLSKDKQQLELENYGSEPVRLNNIHKIK*
JGI10216J12902_1133967291	3300000956	Soil	YATQITFDKKTNSIELENYSSEPVRLNNLELEVKK*
Ga0063454_1016606131	3300004081	Soil	KGVGKMAVATKIDYDKKKKQLVLENYSSEPVRLNEVKIEK*
Ga0062593_1020096072	3300004114	Soil	KGEGRMAYAARINFDKKKNNIELENYSSEPVRLNLLVLEVKK*
Ga0062593_1027544771	3300004114	Soil	LEGEGKLAYYTKIRFDKDKNTMELENYSSEPVRLQNLKAKVKS*
Ga0062589_1011634962	3300004156	Soil	KGQGKMAYATKIRFDKNNNNVELENFTSEPVRLNNLRLEVKK*
Ga0062594_1007241803	3300005093	Soil	NSAGKGEGRMAYATQINFDKKKNTIELENYSSEPVRLNNLELEVRKK*
Ga0070690_1003223942	3300005330	Switchgrass Rhizosphere	DAEGKGQGKMAYATKITFDKNKNNVELENFTSEPVRLNNLRLEVRK*
Ga0070682_1020061862	3300005337	Corn Rhizosphere	GKGVGKMAVATKIEFDKKKKQLVLENYSSEPVRLNEVKIEK*
Ga0068868_1013760411	3300005338	Miscanthus Rhizosphere	FDSQGKGQGKMAYATKIAFDKEKNNVELENYSSEPVRLNNLSLEVKK*
Ga0070692_109410362	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	FDAEGKGQGKMAYATKITFDKNKNNVELENFTSEPVRLNNLRLEVRK*
Ga0070692_111070391	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	GKCAVATKIDFNKEKKVVEIENYGSEPVRLNEVKVKVKS*
Ga0070667_1008242423	3300005367	Switchgrass Rhizosphere	LTGEGRMLWFTQIQMDKKKGLIELENYSSEPVRLNNLKLEQVK*
Ga0068867_1000035848	3300005459	Miscanthus Rhizosphere	FDSQGKGQGKMAYATKIAFDKKKNNVELENYSSEPVRLNNLSLEVKK*
Ga0070672_1002722421	3300005543	Miscanthus Rhizosphere	GKGEGKMAVATKIKFDKEKKVIELENYATEPVRLNNLTAKVKS*
Ga0070672_1005840162	3300005543	Miscanthus Rhizosphere	KMAYATRISFDKKKNQIELENYSSEPVRLNNLVLEVRK*
Ga0070696_1011470191	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	DKDGKGQGKMAVATKIDFDKDKKVVQIENYGSEPVRLNEVKVKVKS*
Ga0068866_100988751	3300005718	Miscanthus Rhizosphere	GEGKASVATKISFDKDKNQVELENYSSEPVRLNNVKVEK*
Ga0068861_1023100042	3300005719	Switchgrass Rhizosphere	GRMAYGARIDFDKKKNQIALENYSSEPVRLNNLKLEVKK*
Ga0066903_1000258491	3300005764	Tropical Forest Soil	GKMAYATKITFDKKKKTVELENYSSEPVRLTTVKSEKG*
Ga0068851_105941522	3300005834	Corn Rhizosphere	GEGKMAVATKIDFDKKNKQIELENYGSEPVRLNNLQVKVKS*
Ga0068860_1007792681	3300005843	Switchgrass Rhizosphere	KDNTGEGKISVATKITLNKKDNTVELENYQSEPVRLNNIRVVK*
Ga0066652_1010972611	3300006046	Soil	MAYATQIKFDKKNNSIELENYSSEPVRLNNLELEVRN*
Ga0075428_10000686713	3300006844	Populus Rhizosphere	MAYATQINFDKKKNSIELENYSSEPVRLNELKLEVKK*
Ga0075430_1000735215	3300006846	Populus Rhizosphere	EGRMAYATQINFDKKKNSIELENYSSEPVRLNELKLEVKK*
Ga0075429_1017499771	3300006880	Populus Rhizosphere	AYETQINFDKKKNTVELENYSSEPVRLNNLELEVRKK*
Ga0068865_1018490561	3300006881	Miscanthus Rhizosphere	MHFDKDGKGEGRMSWFTQINFDKKKQVIEIENYSSEPVRLNNLKLEDVK*
Ga0079218_102055531	3300007004	Agricultural Soil	DRSGKGEGKMAYATQIAFDKKKNSIELENYSSEPVRLNNLTLEVRK*
Ga0079218_106841873	3300007004	Agricultural Soil	LFEMRFDKSGKGEVKMAYATQILFDKKTNSIELENYASEPVRLNNLVLEVKK*
Ga0111539_111283672	3300009094	Populus Rhizosphere	MDVTGVGKGAVATKIVFNKKKNVVELENYSSEPVRLNEVKIQK*
Ga0105245_126729581	3300009098	Miscanthus Rhizosphere	AGKGEGRMSYALQINFDKKKNNIELENYSSEPVRLNNLVLETKK*
Ga0075418_131390371	3300009100	Populus Rhizosphere	GKMAVATKISFDKKKNTMELENYSSEPVRLNNLTVKVVK*
Ga0105092_102345182	3300009157	Freshwater Sediment	MAVATKILFDAKKKVIEIENYSSEPVRLNQLKLEVVK*
Ga0113563_117309272	3300009167	Freshwater Wetlands	YATKINFDRDKKVMEIENYSSEPVRLNNLKVKVKS*
Ga0105242_109667292	3300009176	Miscanthus Rhizosphere	SGKGEGRMAYATQINFDKKKNAIELENYSSEPVRLNNIKVEK*
Ga0105248_112441742	3300009177	Switchgrass Rhizosphere	EGKLAYATQINFDKKKNAIELENYSSEPVRLNNLVLEVKKK*
Ga0105248_114611361	3300009177	Switchgrass Rhizosphere	KLAYATQITFDKKKNTIELENYSSERVRLNNLVLEVKK*
Ga0126304_104027621	3300010037	Serpentine Soil	EGKMAVATKISFDKTKKQIELENYSSEPVRLNNLTMKVKS*
Ga0126315_104431471	3300010038	Serpentine Soil	GKLAYATKIRFDKDKKVLEIENYSSEPVRLNNVKVKART*
Ga0134127_124407251	3300010399	Terrestrial Soil	MAVATKIDFDKKKKQLVLENYSSEPVRLNEVKIEK*
Ga0134121_105368473	3300010401	Terrestrial Soil	GKMAYATQINFDKKKNAIELENYSSEPVRLNNLVLEVKKK*
Ga0134123_115939872	3300010403	Terrestrial Soil	GKDGKGVGKMAVATKIEFDKKKKQLVLENYSSEPVRLNEVKLEK*
Ga0105246_110435202	3300011119	Miscanthus Rhizosphere	TGEGRMLWFTQIQMDKKKGIIELENYSSEAVRLNNLKLEQVK*
Ga0120192_100937021	3300012021	Terrestrial	MAVATKISFDKKKKQIELENYSSEPVRLNEVKVKVKT*
Ga0150985_1089370522	3300012212	Avena Fatua Rhizosphere	MEMHFDKDGKGEGRMSWFTQINFDKKKEAIEIENYSSEPVRLNNLKLEQVK*
Ga0150984_1153172281	3300012469	Avena Fatua Rhizosphere	KGEGKMAYATKIMFDKKTNSIELENYSSEPVRLNNLVLEAKK*
Ga0157347_10514881	3300012502	Arabidopsis Rhizosphere	GKGVGKMAVATKIEFDKKKRQLVLENYSSEPVRLNEVKIEK*
Ga0157309_103164631	3300012895	Soil	VDQPRANGEGEGKLAYYTKIRFDKEKKVMEIENYSSEPVRLNNLKVKVKS*
Ga0164299_116169622	3300012958	Soil	GKGEGKLAYATKIRFDKEKKVLELENYSSEPVRLQNVEVKPRT*
Ga0164301_101696262	3300012960	Soil	AYATQISFDKKKNSIELENYSSEPVRLNELRLEVKN*
Ga0164309_114523162	3300012984	Soil	GKMAVATKIDFNKEKKVVEIENYGSEPVRLNEVKVKVKS*
Ga0157375_110237801	3300013308	Miscanthus Rhizosphere	EMHFDKSGKGEGKMAYATQISFDKKKNQIELENYSSEPVRLNELKLEVKN*
Ga0157375_117803041	3300013308	Miscanthus Rhizosphere	KMAVATKIDFDKKNKQIELENYGSEPVRLNNLQVKVKS*
Ga0075327_11688972	3300014272	Natural And Restored Wetlands	GKMAVATKIEFDRKNQQMVLENFASEPVRLNEIRIRK*
Ga0157380_107224041	3300014326	Switchgrass Rhizosphere	GKMAYATKIAFDKKKNNVELENYSSEPVRLNNLSLEVKK*
Ga0157380_116336081	3300014326	Switchgrass Rhizosphere	AAVATKIVFNKKKNIVELENYSSEPVRLNNIKVDK*
Ga0173480_100059255	3300015200	Soil	DGAGNGQGKLAYGTKIMFDKKKNNVEIENYGTEPVRLNNLKLEVKK*
Ga0132258_100523498	3300015371	Arabidopsis Rhizosphere	KMAYATKIAFDKKKNNVELENYSSEPVRLNNLSLEVKK*
Ga0132258_133162463	3300015371	Arabidopsis Rhizosphere	FTQISFDKAKKSIELEYYSSEPVRLNNLKIENRK*
Ga0132256_1000123521	3300015372	Arabidopsis Rhizosphere	GKMAVATKIEFDKKKKQLVLENYSSEPVRLNEVKIEK*
Ga0132257_1006462821	3300015373	Arabidopsis Rhizosphere	MAYATQISFDKKKNSIELENYSSEPVRLNELRLEVKN*
Ga0132257_1043436341	3300015373	Arabidopsis Rhizosphere	GRMAYAARINFDKKKNNIELENYSSEPVRLNLLVLEVKK*
Ga0132255_1019536491	3300015374	Arabidopsis Rhizosphere	EGKMAWFTQISFDKAKKSIELEYYSSEPVRLNNLKIENRK*
Ga0182035_119004001	3300016341	Soil	GKMAYATKINFDKKKNNIELENYSSEPVRLNNLTLEVKK
Ga0190270_112017641	3300018469	Soil	KMAVATKIEFDKKKKQMVLENYASEPVRLNEIKIEK
Ga0190270_116361942	3300018469	Soil	DKSGKGEGRMAVMTQIMFDKKKQTIELENYSSEPVRLNNLTLEVKK
Ga0190270_127835811	3300018469	Soil	KGEGKLAYATQINFDKKTNSIELENYSTEPVRLNNLELEVRK
Ga0190274_100474723	3300018476	Soil	VFEMRFDGAGNGQGKLAYGTKIMFDKKKNNVEIENYGTEPVRLNNLKLEVKK
Ga0190274_133031033	3300018476	Soil	QMQFNKEGKGEGRMAYATQITFDKKTNSIELENYSSEPVRLNNLELEVKK
Ga0190271_132201812	3300018481	Soil	AYGTKIMFDKKKNNVEIENYGTEPVRLNNLKLEVRK
Ga0193696_10720481	3300020016	Soil	KDGTGEGRMLWFTQIQMDKKKGIIELENYSSEAVRLNNLKLENVK
Ga0224500_100224733	3300022213	Sediment	GKMAYATQIAFDKKKNTIELENYSSEPVRLNELKLEVRK
Ga0222622_112068781	3300022756	Groundwater Sediment	GQGKMAVATKISFDKKKNAIELENYSSEPVRLNNVKVKVKT
Ga0247753_10102312	3300022892	Soil	MAVATKIDFDKDKKVVQIENYGSEPVRLNEVKVKVKS
Ga0247762_12284901	3300023169	Plant Litter	PFSVFEMRFDGAGNGQGKLAYGTKIMFDKKKNNVEIENYGTEPVRLNNLKLEVKK
Ga0207680_111906951	3300025903	Switchgrass Rhizosphere	GRMSWFTQIDFDKKKQVIEIENYSSEPVRLNNLKLEDVK
Ga0207649_106623212	3300025920	Corn Rhizosphere	VNKDGEGEGKLAYATKIHFDKEKKIVEIENYSSEPVRLQNVKVKVKS
Ga0207650_106758552	3300025925	Switchgrass Rhizosphere	KDLTGEGRMLWFTQIQMDKKKGIIELENYSSEPVRLNNLKLENVK
Ga0207650_109651352	3300025925	Switchgrass Rhizosphere	KGEGRMSWFTQIDFDKKKQVIEIENYSSEPVRLNNLKLEDVK
Ga0207659_106642923	3300025926	Miscanthus Rhizosphere	KAGKGEGRLAYATQISFDKKKNSIEIENYSSEPVRLNELKLESKK
Ga0207659_107187521	3300025926	Miscanthus Rhizosphere	TGVGKAAVATQIIYNKKKNVVELENYSSEPVRLNNLKIEK
Ga0207659_116455161	3300025926	Miscanthus Rhizosphere	GKGEGKMAYATQISFDKKKNSIELENYSSEPVRLNNLELEVKK
Ga0207690_106368841	3300025932	Corn Rhizosphere	MAVATKISFDKEKKVMELENYSSEPVRLNNLTVKVKS
Ga0207669_108489692	3300025937	Miscanthus Rhizosphere	GQGKMAYATKIAFDKKKNNVELENYSSEPVRLNNLSLEVKK
Ga0207691_103036481	3300025940	Miscanthus Rhizosphere	AGKGQGKMAYATRISFDKKKNQIELENYSSEPVRLNNLVLEVRK
Ga0207689_103202391	3300025942	Miscanthus Rhizosphere	GEGKMAVATKIDFDKKNKQIELENYGSEPVRLNNLQVKVKS
Ga0207689_104672981	3300025942	Miscanthus Rhizosphere	YGTRIVFDKKKNNIELENYGSEPVRLNNLKLEVKN
Ga0207651_103582562	3300025960	Switchgrass Rhizosphere	GKMSYATKITFDKKKNNVELENYASEPVRLNNLTLEVKK
Ga0207651_110926712	3300025960	Switchgrass Rhizosphere	SGKGEGRMAYATQISFDKKKNSIELENYSSEPVRLNELKLEVKK
Ga0207668_101082613	3300025972	Switchgrass Rhizosphere	YATQILFDKKKNQIELENYSSEPVRLNNLELEVKKK
Ga0207658_101881501	3300025986	Switchgrass Rhizosphere	DSQGKGQGKMAYATKIAFDKKKNNVELENYSSEPVRLNNVKVEK
Ga0207658_109515711	3300025986	Switchgrass Rhizosphere	LWFTQIQMDKKKGIIELENYSSEAVRLNNLKLEQVK
Ga0207677_104688783	3300026023	Miscanthus Rhizosphere	RMSYALQINFDKKKNNIELENYSSEPVRLNNLELESRK
Ga0207703_104991993	3300026035	Switchgrass Rhizosphere	KCAVATKIDFNKEKKVVEIENYGSEPVRLNEVKVKVKS
Ga0207641_112326092	3300026088	Switchgrass Rhizosphere	MAVATKIDFDKKNKQIELENYGSEPVRLNNLQVKVKS
Ga0207641_117075772	3300026088	Switchgrass Rhizosphere	MAVATKISLNKDKQQLELENYGSEPVRLNNIHKIK
Ga0207648_100101781	3300026089	Miscanthus Rhizosphere	AYATKIAFDKKKNNVELENYSSEPVRLNNLSLEVKK
Ga0207648_116946832	3300026089	Miscanthus Rhizosphere	GRMLWFTQIQMDKKKGIIELENYSSEAVRLNNLKLENVK
Ga0207648_121956562	3300026089	Miscanthus Rhizosphere	SYATKITFGKKKNNVELENYASEPVRLNNLTLEVKK
Ga0209077_10910661	3300027675	Freshwater Sediment	DKSGKGEGRMAYATQITFNKKKNAIELEYYSSEPVRLNNLKLEVVK
Ga0209382_100660816	3300027909	Populus Rhizosphere	DGKGEGRMAYATQIMFDKKKNTIELENYSSEPVRLNNLELEVRKK
Ga0209382_100697541	3300027909	Populus Rhizosphere	PFTIFEMRFDKSGKGEGKVAWGTQIRFDKKNNNIELENYSTEPVRLNNLVLSVKK
Ga0209382_121410832	3300027909	Populus Rhizosphere	GKMAYATQIKFDKKTNSIELENYSTEPVRLNNLELEVKK
Ga0268265_121705352	3300028380	Switchgrass Rhizosphere	RIKKDGTGVGKAAVATQIIYNKKKNVVELENYSSEPVRLNNIKIEK
Ga0268264_108172131	3300028381	Switchgrass Rhizosphere	MSYALQINFDKKKNNIELENYSSEPVRLNNLVLETKK
Ga0307306_100852572	3300028782	Soil	QFDKSGKGEGRMAYGTKIEFDKKKQVIDLENYSSEPVRLNQLQLKTK
Ga0307498_104707052	3300031170	Soil	LEMHFDKAGKGEGRMAVYTQLNFNDKKKALEIENWGSEPVRLNQLTLEVKK
Ga0307497_102926162	3300031226	Soil	EGKLAYATQITFDKKKNTIELENYSSERVRLNNLVLEVKK
Ga0310813_107713262	3300031716	Soil	RGKMAYATKIRFDKNKNNVELENFSSEPVRLNNLRLEVRK
Ga0318500_105418412	3300031724	Soil	GRMAYGTQIRFDQRNNNIVLEHYASEPVRLNQLTLEVRK
Ga0310907_102606911	3300031847	Soil	EGKMAVATKISFDKKKNAIELENYSSEPVRLNNVKVKVKT
Ga0307410_106588613	3300031852	Rhizosphere	SGKGVGKMAVATKIDFDKKKRQMVLENYASEPVRLNEVKIEK
Ga0310904_107396782	3300031854	Soil	MAVGTMISFDKKKNTVELENYASEPVRLNSLKVRTAK
Ga0310904_108564672	3300031854	Soil	HFGPDGKGEGRLAYATQISFDKKKNSIEIENYSSEPVRLNELKLEQKK
Ga0310900_117577061	3300031908	Soil	EGKGQGKMAYATKITFDKNKNNVELENFTSEPVRLNNLRLEVRK
Ga0306921_105530331	3300031912	Soil	EIRIKTNGEGEGKMALATKIAYNKKKNAIELENYSTEPVRLQNVRVEATK
Ga0310901_105584211	3300031940	Soil	GKGEGRMAYATQISFDKKKNSIELENYSSEPVRLNELKLEVKK
Ga0310885_103076941	3300031943	Soil	VATKISFDKEKKQIELENYASEPVRLNNLTVKVKS
Ga0310884_105560412	3300031944	Soil	AAVATKIIFNKKKNVVELENYSSEPVRLNNIKIEK
Ga0310884_107743482	3300031944	Soil	DKSGKGEGRMAYATQINFDKKKNSIELENYSSEPVRLNELKLEVKK
Ga0307409_1007006773	3300031995	Rhizosphere	KMAVATKIDFDKKKRQMVLENYASEPVRLNEVKIEK
Ga0310903_100925411	3300032000	Soil	FQMHFNKAGKGEGKMAYATQISFDKKKNSIELENYSSEPVRLNELKLEVKK
Ga0310906_104117161	3300032013	Soil	EGRMAYATQISFDKKKQAIELENYSSEPVRLNQLVLEVKK
Ga0310906_114495362	3300032013	Soil	EGKMAVATKIDFNKSKNTVELENYSSEPVRLQNLKIKAG
Ga0310899_101079792	3300032017	Soil	MAYATQIKFDKKNNSIELENYSSEPVRLNNLELEVRN
Ga0318556_106264462	3300032043	Soil	KMAYATKITFDKKKNTVELENYSSEPVRLNTVKVEKG
Ga0310890_100576323	3300032075	Soil	GVGKAAVATKIIFNKKKNVVELENYSSEPVRLNNIKIEK
Ga0315910_106414631	3300032144	Soil	KGVGKLGYATQISLDKKKNSIELENYSSEPVRLNNLVLEVKRK
Ga0315910_112712492	3300032144	Soil	EGEGRMAYATQITFDKKKNTVELENYSSEPVRLNQLKLEPKK
Ga0310889_103573251	3300032179	Soil	QGKCAVATKIDFNKEKKVVEIENYGSEPVRLNEVKVKVKS
Ga0315271_112660551	3300032256	Sediment	MAYATQISFDKKKNAIELENYASEPVRLNNLVLEKGK
Ga0316625_1017882242	3300033418	Soil	NEGEGEGKFAVATKIAFDKDAKKIELENWGSEPVRLNAVKVKVKK
Ga0316627_1017788321	3300033482	Soil	EMRFDKAGKGEGRMAYATQITFDKAKNAIELENYSSEPVRLNNLELQVRK
Ga0316621_109303731	3300033488	Soil	VAVATKITFDRKANQVELENYSSEPVRLNNVKVKV
Ga0247830_109425072	3300033551	Soil	SGKGVGKMAVATKIEFDKKKKQMVLENYASEPVRLNEIKIEK
Ga0335056_0296469_16_129	3300034120	Freshwater	MSVATKITFDKKDQRIELENWSSEPVRLNEVKVSPKK
Ga0373918_0142929_11_124	3300034420	Sediment Slurry	MAVATMIDYDKDKKQLILENYSSEPLRLSKVTVKEKK
Ga0314780_185228_420_533	3300034659	Soil	MAYATQIKFDKKSNSIELENYSSEPVRLNNLELEVRK

Hidden Markov Model


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