NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F053874

Metagenome / Metatranscriptome Family F053874

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F053874
Family Type Metagenome / Metatranscriptome
Number of Sequences 140
Average Sequence Length 53 residues
Representative Sequence LLLVACTEDQSKAIGQQPKKTVDRVTTDINKAMQQGQGSERLKEEQK
Number of Associated Samples 114
Number of Associated Scaffolds 140

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 32.86 %
% of genes near scaffold ends (potentially truncated) 17.86 %
% of genes from short scaffolds (< 2000 bps) 79.29 %
Associated GOLD sequencing projects 109
AlphaFold2 3D model prediction Yes
3D model pTM-score0.34

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (74.286 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(22.857 % of family members)
Environment Ontology (ENVO) Unclassified
(37.857 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Subsurface (non-saline)
(35.714 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 40.00%    β-sheet: 0.00%    Coil/Unstructured: 60.00%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.34
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 140 Family Scaffolds
PF02666PS_Dcarbxylase 39.29
PF01450IlvC 27.14
PF07991IlvN 12.86
PF01066CDP-OH_P_transf 6.43
PF13710ACT_5 3.57
PF10369ALS_ss_C 2.86
PF00682HMGL-like 1.43
PF02775TPP_enzyme_C 1.43
PF02776TPP_enzyme_N 0.71
PF13501SoxY 0.71
PF08502LeuA_dimer 0.71
PF00848Ring_hydroxyl_A 0.71
PF03739LptF_LptG 0.71
PF02954HTH_8 0.71

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 140 Family Scaffolds
COG0059Ketol-acid reductoisomeraseAmino acid transport and metabolism [E] 80.00
COG0688Phosphatidylserine decarboxylaseLipid transport and metabolism [I] 39.29
COG0499S-adenosylhomocysteine hydrolaseCoenzyme transport and metabolism [H] 12.86
COG0558Phosphatidylglycerophosphate synthaseLipid transport and metabolism [I] 6.43
COG1183Phosphatidylserine synthaseLipid transport and metabolism [I] 6.43
COG5050sn-1,2-diacylglycerol ethanolamine- and cholinephosphotranferasesLipid transport and metabolism [I] 6.43
COG4638Phenylpropionate dioxygenase or related ring-hydroxylating dioxygenase, large terminal subunitInorganic ion transport and metabolism [P] 1.43
COG0119Isopropylmalate/homocitrate/citramalate synthasesAmino acid transport and metabolism [E] 0.71
COG0795Lipopolysaccharide export LptBFGC system, permease protein LptFCell wall/membrane/envelope biogenesis [M] 0.71


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms75.00 %
UnclassifiedrootN/A25.00 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000890|JGI11643J12802_11822864Not Available555Open in IMG/M
3300002120|C687J26616_10276995Not Available512Open in IMG/M
3300002121|C687J26615_10006298All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria2701Open in IMG/M
3300002124|C687J26631_10218662All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria632Open in IMG/M
3300003465|P52013CM_1025773All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1780Open in IMG/M
3300003465|P52013CM_1047320All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales1035Open in IMG/M
3300003465|P52013CM_1069177All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria768Open in IMG/M
3300004463|Ga0063356_103406435Not Available685Open in IMG/M
3300004463|Ga0063356_104803195All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria581Open in IMG/M
3300004463|Ga0063356_105049786All Organisms → cellular organisms → Bacteria → Proteobacteria567Open in IMG/M
3300004780|Ga0062378_10061031Not Available853Open in IMG/M
3300005833|Ga0074472_10749355All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria697Open in IMG/M
3300006844|Ga0075428_100023029All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales6893Open in IMG/M
3300006845|Ga0075421_100211916All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria2392Open in IMG/M
3300006845|Ga0075421_101727936Not Available676Open in IMG/M
3300006846|Ga0075430_100168355All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1823Open in IMG/M
3300006894|Ga0079215_10176452All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1053Open in IMG/M
3300006894|Ga0079215_11436105Not Available541Open in IMG/M
3300007004|Ga0079218_10126570All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1815Open in IMG/M
3300007004|Ga0079218_10442347All Organisms → cellular organisms → Bacteria → Proteobacteria1125Open in IMG/M
3300009037|Ga0105093_10868246Not Available528Open in IMG/M
3300009078|Ga0105106_10012464All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Rhodocyclaceae → Azospira6194Open in IMG/M
3300009100|Ga0075418_10005522All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria14321Open in IMG/M
3300009137|Ga0066709_103164615All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia601Open in IMG/M
3300009444|Ga0114945_10528445All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria712Open in IMG/M
3300009527|Ga0114942_1394154All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales553Open in IMG/M
3300009597|Ga0105259_1019295All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales1411Open in IMG/M
3300009610|Ga0105340_1022375All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria2462Open in IMG/M
3300009797|Ga0105080_1055097All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria514Open in IMG/M
3300009806|Ga0105081_1026221All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria747Open in IMG/M
3300009840|Ga0126313_10522866All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria951Open in IMG/M
3300010045|Ga0126311_10376489All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1087Open in IMG/M
3300010047|Ga0126382_10853888All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria782Open in IMG/M
3300010391|Ga0136847_10515069All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria2797Open in IMG/M
3300010400|Ga0134122_10891151Not Available860Open in IMG/M
3300011399|Ga0137466_1033934All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria740Open in IMG/M
3300011402|Ga0137356_1073054All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales653Open in IMG/M
3300011407|Ga0137450_1053816Not Available742Open in IMG/M
3300011423|Ga0137436_1122048All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria693Open in IMG/M
3300011424|Ga0137439_1006645All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1601Open in IMG/M
3300011424|Ga0137439_1106188Not Available621Open in IMG/M
3300011437|Ga0137429_1032007All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1516Open in IMG/M
3300011442|Ga0137437_1059088All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1310Open in IMG/M
3300012034|Ga0137453_1031713Not Available895Open in IMG/M
3300012040|Ga0137461_1196756Not Available592Open in IMG/M
3300012113|Ga0137328_1012788Not Available749Open in IMG/M
3300012137|Ga0137346_1021195Not Available796Open in IMG/M
3300012163|Ga0137355_1060424All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria720Open in IMG/M
3300012212|Ga0150985_101321915All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria829Open in IMG/M
3300012905|Ga0157296_10375911All Organisms → cellular organisms → Bacteria524Open in IMG/M
3300014862|Ga0180096_1025607Not Available588Open in IMG/M
3300014870|Ga0180080_1053845Not Available670Open in IMG/M
3300014882|Ga0180069_1052219All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria921Open in IMG/M
3300015373|Ga0132257_104179570Not Available525Open in IMG/M
3300017965|Ga0190266_10780455Not Available610Open in IMG/M
3300018059|Ga0184615_10130873All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1416Open in IMG/M
3300018063|Ga0184637_10246818All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1088Open in IMG/M
3300018063|Ga0184637_10551031All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales662Open in IMG/M
3300018079|Ga0184627_10038616All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria2439Open in IMG/M
3300018079|Ga0184627_10406003All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria709Open in IMG/M
3300018083|Ga0184628_10120602All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1356Open in IMG/M
3300018422|Ga0190265_10075982All Organisms → cellular organisms → Bacteria → Proteobacteria3054Open in IMG/M
3300018429|Ga0190272_10190773All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1468Open in IMG/M
3300018469|Ga0190270_12182374All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales614Open in IMG/M
3300018476|Ga0190274_10264037All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1572Open in IMG/M
3300018476|Ga0190274_12008005Not Available674Open in IMG/M
3300018476|Ga0190274_13627865Not Available521Open in IMG/M
3300018481|Ga0190271_11376850All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria825Open in IMG/M
3300018481|Ga0190271_11453040All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria803Open in IMG/M
3300019208|Ga0180110_1097574Not Available858Open in IMG/M
3300019257|Ga0180115_1260685All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria592Open in IMG/M
3300019377|Ga0190264_10537943All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria812Open in IMG/M
3300019458|Ga0187892_10003088All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria31292Open in IMG/M
3300020027|Ga0193752_1060808Not Available1617Open in IMG/M
3300020060|Ga0193717_1025882All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria2382Open in IMG/M
3300020063|Ga0180118_1399300All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales777Open in IMG/M
3300020202|Ga0196964_10026787All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria2383Open in IMG/M
3300025155|Ga0209320_10288899All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria686Open in IMG/M
3300025155|Ga0209320_10371393Not Available581Open in IMG/M
3300025159|Ga0209619_10169491All Organisms → cellular organisms → Bacteria1245Open in IMG/M
3300025160|Ga0209109_10038688All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria2559Open in IMG/M
3300025160|Ga0209109_10292824All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria779Open in IMG/M
3300025160|Ga0209109_10542055Not Available522Open in IMG/M
3300025165|Ga0209108_10008823All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales5703Open in IMG/M
3300025289|Ga0209002_10142986All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1531Open in IMG/M
3300025318|Ga0209519_10456475Not Available722Open in IMG/M
3300025319|Ga0209520_10413542All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria807Open in IMG/M
3300025319|Ga0209520_10442177All Organisms → cellular organisms → Bacteria773Open in IMG/M
3300025325|Ga0209341_10382588All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1143Open in IMG/M
3300025327|Ga0209751_10133707All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria2144Open in IMG/M
3300025954|Ga0210135_1002590All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1423Open in IMG/M
3300026315|Ga0209686_1072474All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1225Open in IMG/M
3300026535|Ga0256867_10253107All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria633Open in IMG/M
3300027364|Ga0209967_1001012Not Available3588Open in IMG/M
3300027378|Ga0209981_1005554Not Available1674Open in IMG/M
3300027533|Ga0208185_1004886All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria3397Open in IMG/M
3300027682|Ga0209971_1019156All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1625Open in IMG/M
3300027713|Ga0209286_1010812Not Available3236Open in IMG/M
3300027886|Ga0209486_10105645Not Available1501Open in IMG/M
3300027909|Ga0209382_10163120All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria2574Open in IMG/M
3300027950|Ga0209885_1003108All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria1615Open in IMG/M
3300028802|Ga0307503_10149609Not Available1058Open in IMG/M
3300028802|Ga0307503_10387962All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales726Open in IMG/M
3300028802|Ga0307503_10557345All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria626Open in IMG/M
3300028803|Ga0307281_10061557All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1201Open in IMG/M
3300028809|Ga0247824_10826483Not Available574Open in IMG/M
3300030606|Ga0299906_10308655All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1235Open in IMG/M
3300030619|Ga0268386_10196568All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → genistoids sensu lato → core genistoids → Genisteae → Lupinus → Lupinus albus1513Open in IMG/M
3300030620|Ga0302046_10071454All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria2817Open in IMG/M
3300030620|Ga0302046_10370159All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1177Open in IMG/M
3300031184|Ga0307499_10019484Not Available1445Open in IMG/M
3300031226|Ga0307497_10068990All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1297Open in IMG/M
3300031229|Ga0299913_10113888All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria2651Open in IMG/M
3300031455|Ga0307505_10477152All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria599Open in IMG/M
3300031493|Ga0314826_137675All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria504Open in IMG/M
3300031576|Ga0247727_10000066All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria224536Open in IMG/M
3300031576|Ga0247727_10198279All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1843Open in IMG/M
3300031824|Ga0307413_11798997All Organisms → cellular organisms → Bacteria → Proteobacteria548Open in IMG/M
3300031903|Ga0307407_10834570All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria703Open in IMG/M
3300031965|Ga0326597_10223447All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria2191Open in IMG/M
3300031965|Ga0326597_11266771All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria723Open in IMG/M
3300031995|Ga0307409_102004826Not Available608Open in IMG/M
3300032002|Ga0307416_103470039All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria527Open in IMG/M
3300032144|Ga0315910_10552487All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria890Open in IMG/M
3300032157|Ga0315912_10040634All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria3705Open in IMG/M
3300032157|Ga0315912_10057022All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria3086Open in IMG/M
3300032157|Ga0315912_10142002All Organisms → cellular organisms → Bacteria → Proteobacteria1882Open in IMG/M
3300032157|Ga0315912_10380640All Organisms → cellular organisms → Bacteria → Proteobacteria1116Open in IMG/M
3300032180|Ga0307471_103127660All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria587Open in IMG/M
3300032770|Ga0335085_10415034All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1558Open in IMG/M
3300033407|Ga0214472_10071373All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria3481Open in IMG/M
3300033417|Ga0214471_10017477All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria5667Open in IMG/M
3300033417|Ga0214471_10092180All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria2490Open in IMG/M
3300033433|Ga0326726_10610293All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1049Open in IMG/M
3300033814|Ga0364930_0024296All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria2034Open in IMG/M
3300033815|Ga0364946_091104All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales670Open in IMG/M
3300034178|Ga0364934_0185095All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria789Open in IMG/M
3300034257|Ga0370495_0232291All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria600Open in IMG/M
3300034354|Ga0364943_0429927Not Available513Open in IMG/M
3300034965|Ga0370497_0057024Not Available874Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil22.86%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil13.57%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil7.86%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment4.29%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere4.29%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere4.29%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil3.57%
SoilEnvironmental → Terrestrial → Soil → Loam → Unclassified → Soil3.57%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil2.86%
SedimentEnvironmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment2.86%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere2.86%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment2.14%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment2.14%
Ore Pile And Mine Drainage Contaminated SoilEnvironmental → Terrestrial → Soil → Unclassified → Mine Drainage → Ore Pile And Mine Drainage Contaminated Soil2.14%
Groundwater SandEnvironmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand2.14%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil1.43%
Untreated Peat SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil1.43%
BiofilmEnvironmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm1.43%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Sediment0.71%
Wetland SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment0.71%
GroundwaterEnvironmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater0.71%
SoilEnvironmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil0.71%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands0.71%
Thermal SpringsEnvironmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Thermal Springs0.71%
Sediment (Intertidal)Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)0.71%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.71%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil0.71%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil0.71%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil0.71%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.71%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil0.71%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil0.71%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.71%
SoilEnvironmental → Terrestrial → Soil → Sand → Desert → Soil0.71%
Peat SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil0.71%
Bio-OozeEnvironmental → Terrestrial → Cave → Unclassified → Unclassified → Bio-Ooze0.71%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.71%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere0.71%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000890Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
3300002120Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_2EnvironmentalOpen in IMG/M
3300002121Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_1EnvironmentalOpen in IMG/M
3300002124Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_3EnvironmentalOpen in IMG/M
3300003465Ore pile and mine drainage contaminated soil microbial communities from Mina do Sossego, Brazil - P5 sampleEnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300004780Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare1FreshEnvironmentalOpen in IMG/M
3300005833Microbial communities from Cathlamet Bay sediment, Columbia River estuary, Oregon - S.174_CBKEnvironmentalOpen in IMG/M
3300006844Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2Host-AssociatedOpen in IMG/M
3300006845Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5Host-AssociatedOpen in IMG/M
3300006846Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4Host-AssociatedOpen in IMG/M
3300006894Agricultural soil microbial communities from Utah to study Nitrogen management - NC ControlEnvironmentalOpen in IMG/M
3300007004Agricultural soil microbial communities from Utah to study Nitrogen management - NC CompostEnvironmentalOpen in IMG/M
3300009037Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 1-3cm March2015EnvironmentalOpen in IMG/M
3300009078Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm September2015EnvironmentalOpen in IMG/M
3300009100Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2Host-AssociatedOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009444Hot spring microbial communities from Beatty, Nevada to study Microbial Dark Matter (Phase II) - OV2 TP3EnvironmentalOpen in IMG/M
3300009527Groundwater microbial communities from Cold Creek, Nevada to study Microbial Dark Matter (Phase II) - Lower Cold CreekEnvironmentalOpen in IMG/M
3300009597Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT299EnvironmentalOpen in IMG/M
3300009610Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700EnvironmentalOpen in IMG/M
3300009797Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_10_20EnvironmentalOpen in IMG/M
3300009806Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_50_60EnvironmentalOpen in IMG/M
3300009840Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105AEnvironmentalOpen in IMG/M
3300010045Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61EnvironmentalOpen in IMG/M
3300010047Tropical forest soil microbial communities from Panama - MetaG Plot_30EnvironmentalOpen in IMG/M
3300010391Freshwater sediment microbial communities from Lake Superior, USA - Station SU-17. Combined Assembly of Gp0155404, Gp0155335, Gp0155336, Gp0155336, Gp0155403, Gp0155406EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300011399Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT842_2EnvironmentalOpen in IMG/M
3300011402Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT830_2EnvironmentalOpen in IMG/M
3300011407Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT454_2EnvironmentalOpen in IMG/M
3300011423Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT119_2EnvironmentalOpen in IMG/M
3300011424Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT200_2EnvironmentalOpen in IMG/M
3300011437Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT736_2EnvironmentalOpen in IMG/M
3300011442Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT138_2EnvironmentalOpen in IMG/M
3300012034Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT526_2EnvironmentalOpen in IMG/M
3300012040Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT746_2EnvironmentalOpen in IMG/M
3300012113Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT100_2EnvironmentalOpen in IMG/M
3300012137Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT560_2EnvironmentalOpen in IMG/M
3300012163Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT800_2EnvironmentalOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012905Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S013-104B-2EnvironmentalOpen in IMG/M
3300014862Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT293_16_1DaEnvironmentalOpen in IMG/M
3300014870Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT560_16_10DEnvironmentalOpen in IMG/M
3300014882Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT231B'_16_10DEnvironmentalOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300017965Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 TEnvironmentalOpen in IMG/M
3300018059Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_coexEnvironmentalOpen in IMG/M
3300018063Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2EnvironmentalOpen in IMG/M
3300018079Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b1EnvironmentalOpen in IMG/M
3300018083Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1EnvironmentalOpen in IMG/M
3300018422Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 TEnvironmentalOpen in IMG/M
3300018429Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 TEnvironmentalOpen in IMG/M
3300018469Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 TEnvironmentalOpen in IMG/M
3300018476Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 TEnvironmentalOpen in IMG/M
3300018481Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 TEnvironmentalOpen in IMG/M
3300019208Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT231_16_1Ra (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019257Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT660_16_1Ra (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019377Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 TEnvironmentalOpen in IMG/M
3300019458Bio-ooze microbial communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-3 metaGEnvironmentalOpen in IMG/M
3300020027Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1c1EnvironmentalOpen in IMG/M
3300020060Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2c2EnvironmentalOpen in IMG/M
3300020063Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT730_16_1Ra (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300020202Soil microbial communities from Anza Borrego desert, Southern California, United States - S1_10EnvironmentalOpen in IMG/M
3300025155Soil microbial communities from Rifle, Colorado, USA - sediment 13ft 4EnvironmentalOpen in IMG/M
3300025159Soil microbial communities from Rifle, Colorado, USA - sediment 16ft 3EnvironmentalOpen in IMG/M
3300025160Soil microbial communities from Rifle, Colorado, USA - sediment 10ft 2EnvironmentalOpen in IMG/M
3300025165Soil microbial communities from Rifle, Colorado, USA - sediment 10ft 1EnvironmentalOpen in IMG/M
3300025289Soil microbial communities from Rifle, Colorado, USA - sediment 16ft 2EnvironmentalOpen in IMG/M
3300025318Soil microbial communities from Rifle, Colorado, USA - sediment 13ft 1EnvironmentalOpen in IMG/M
3300025319Soil microbial communities from Rifle, Colorado, USA - sediment 16ft 1EnvironmentalOpen in IMG/M
3300025325Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_2 (SPAdes)EnvironmentalOpen in IMG/M
3300025327Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_1 (SPAdes)EnvironmentalOpen in IMG/M
3300025954Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqC_D1 (SPAdes)EnvironmentalOpen in IMG/M
3300026315Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126 (SPAdes)EnvironmentalOpen in IMG/M
3300026535Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT150D86 (HiSeq)EnvironmentalOpen in IMG/M
3300027364Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co AM (SPAdes)Host-AssociatedOpen in IMG/M
3300027378Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 PM (SPAdes)Host-AssociatedOpen in IMG/M
3300027533Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700 (SPAdes)EnvironmentalOpen in IMG/M
3300027682Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes)Host-AssociatedOpen in IMG/M
3300027713Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 10-12cm March2015 (SPAdes)EnvironmentalOpen in IMG/M
3300027886Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)EnvironmentalOpen in IMG/M
3300027909Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)Host-AssociatedOpen in IMG/M
3300027950Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_40_50 (SPAdes)EnvironmentalOpen in IMG/M
3300028802Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_SEnvironmentalOpen in IMG/M
3300028803Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_120EnvironmentalOpen in IMG/M
3300028809Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day48EnvironmentalOpen in IMG/M
3300030606Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT145D125EnvironmentalOpen in IMG/M
3300030619Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT150D86 (Novaseq)EnvironmentalOpen in IMG/M
3300030620Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT147D111EnvironmentalOpen in IMG/M
3300031184Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 13_SEnvironmentalOpen in IMG/M
3300031226Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_SEnvironmentalOpen in IMG/M
3300031229Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38EnvironmentalOpen in IMG/M
3300031455Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 23_SEnvironmentalOpen in IMG/M
3300031493Metatranscriptome of soil surface biofilm microbial communities from soil inoculated with nitrogen-fixing consortium DG1, State College, Pennsylvania, United States - MICR_R5 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031576Biofilm microbial communities from Wishing Well Cave, Virginia, United States - WW16-25EnvironmentalOpen in IMG/M
3300031824Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2Host-AssociatedOpen in IMG/M
3300031903Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1Host-AssociatedOpen in IMG/M
3300031965Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT100D185EnvironmentalOpen in IMG/M
3300031995Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2Host-AssociatedOpen in IMG/M
3300032002Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3Host-AssociatedOpen in IMG/M
3300032144Garden soil microbial communities collected in Santa Monica, California, United States - Edamame soilEnvironmentalOpen in IMG/M
3300032157Garden soil microbial communities collected in Santa Monica, California, United States - V. faba soilEnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032770Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5EnvironmentalOpen in IMG/M
3300033407Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT140D175EnvironmentalOpen in IMG/M
3300033417Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT142D155EnvironmentalOpen in IMG/M
3300033433Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MNEnvironmentalOpen in IMG/M
3300033814Sediment microbial communities from East River floodplain, Colorado, United States - 55_j17EnvironmentalOpen in IMG/M
3300033815Sediment microbial communities from East River floodplain, Colorado, United States - 31_s17EnvironmentalOpen in IMG/M
3300034178Sediment microbial communities from East River floodplain, Colorado, United States - 27_j17EnvironmentalOpen in IMG/M
3300034257Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_02D_17EnvironmentalOpen in IMG/M
3300034354Sediment microbial communities from East River floodplain, Colorado, United States - 23_s17EnvironmentalOpen in IMG/M
3300034965Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_04D_17EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI11643J12802_1182286423300000890SoilSILLRISLVLMLAACTEEQSRALGQQPKKTVDRVTTDVNKAMQQG
C687J26616_1027699523300002120SoilLSILLRTSLVVLLLAACTEDQSKAIGNIPKKTIDKVTVDVNKAMQQGGQGSERLKEEEQK
C687J26615_1000629843300002121SoilLSILLRISLVVLLLAACTEDQSKAIGNIPKKTIDKATVDVNKAMQQGAERLKEEEK*
C687J26631_1021866223300002124SoilLLTLLRISLVAVLLLGCTEEQSRAVGAQPKKTIDRVTTDVNKAMQQGQGSDRLKEDDK*
P52013CM_102577323300003465Ore Pile And Mine Drainage Contaminated SoilLSTLLRISLLALLLAACSEEQSRAIGQQPKKTVDRVTTDVNKAMQSERVQAEEK*
P52013CM_104732023300003465Ore Pile And Mine Drainage Contaminated SoilMRYLLVAALMVFSFGCTEEQSRNIGAQPKKTIDRVTTDVNKAMQSERVKGDEK*
P52013CM_106917723300003465Ore Pile And Mine Drainage Contaminated SoilMKYLVLALAVLSFGCTEEQSRNIGAQPKKTVDRVTTDVGKAMQQGQGSERLKEDDK*
Ga0063356_10340643513300004463Arabidopsis Thaliana RhizosphereMKYLIPLLLLASLSACTPEQSTAIGNQPKKTVDKVSTDVTKAMQQGGQDSERLKEDQK*
Ga0063356_10480319523300004463Arabidopsis Thaliana RhizosphereLSTPPRISALLVTLLALAGCSPEQSRNIGAQPKKTIDKVTVDVNKSMQQGSERLKDQDKQ
Ga0063356_10504978623300004463Arabidopsis Thaliana RhizosphereLSTLPRTSLLLAALALAACSPEQSKSIGAQPKKTVDKVTTDVNKSMQQGSERLKDQDSK*
Ga0062378_1006103123300004780Wetland SedimentCTEEQSKSVGQIPKKTLDKAAADINKAMQQGQGSERLKEDQQ*
Ga0074472_1074935523300005833Sediment (Intertidal)LSILQKTSLLIFSVVLAGCTPEQSKEIGNAPKKTVDKVTTDINKAIQQQGQGSERLKEDQK*
Ga0075428_10002302963300006844Populus RhizosphereLSTLLRISLVLLLVACTEDQSKAIGQQPKKTVDRVTTDINKAMQQGQGSERLKEEQK*
Ga0075421_10021191633300006845Populus RhizosphereLSTLLRISLVLLLIACTEDQSKALGQQPKKTVDRVTTDINKAMQQGQGSERLKEEQK*
Ga0075421_10172793623300006845Populus RhizosphereRTALSILLRISLVLMLAACTEEQSRALGQQPKKTVDRVTTDVNKAMQQGQGAERLKEEEPK*
Ga0075430_10016835533300006846Populus RhizosphereMLAACTEEQSRALGQQPKKTVDRVTTDVNKAMQQGQGAERLKEEEPK*
Ga0079215_1017645223300006894Agricultural SoilMLVGCTEEQSRAIGQQPKKTIDRVTSDVNKAMQQGSERLKEDQK*
Ga0079215_1143610513300006894Agricultural SoilMLAVSGCTPEQSKAIGDQPKKTVDKVTTDVNKAMQNAGQGSERLKEDPK*
Ga0079218_1012657023300007004Agricultural SoilMKYLLAGLMVFALGCTEEQSRNIGAQPKKTIDRVTTDVNKAMRSDRLKEDEK*
Ga0079218_1044234723300007004Agricultural SoilMKYMAVVCVMLAVSGCTPEQSKALGDQPKKTIDRATTDVNKAMQNAGQGSERLKEEQK*
Ga0105093_1086824613300009037Freshwater SedimentMMLLLGSCTEDQSRAIGAQPKKTIDRVTTDVNKAMQSDRLKEDGK*
Ga0105106_1001246493300009078Freshwater SedimentMRFLVFGMMLLLGSCTEDQSRAIGAQPKKTIDRVTTDVNKAMQSDRLKEDGK*
Ga0075418_1000552263300009100Populus RhizosphereLLLVACTEDQSKAIGQQPKKTVDRVTTDINKAMQQGQGSERLKEEQK*
Ga0066709_10316461513300009137Grasslands SoilMTIVFALLLAACTPDQSKNIGAQPKKTVDSVSGKVNDLMKQQGQDS
Ga0114945_1052844523300009444Thermal SpringsLILAACTPEQSQEVGRIPKKTVDKAKSDIEKAMQQGQGSDRLKEDRQ*
Ga0114942_139415423300009527GroundwaterLSILPRTSLVVVALALAACTPEQSKEIGGAPKKTVDRVTTDVNKAMQNAGQGSERLKEDQK*
Ga0105259_101929523300009597SoilVACTPEQSREIGNIPKKTMDRATTDVNKAMQNAGQGSERLKEDQK*
Ga0105340_102237533300009610SoilMNHSILVLLVIGLAACTPEQSKALGDQPKKTVDKVTTDVNKAMQNAGQGSERLKEDQK*
Ga0105080_105509723300009797Groundwater SandVLLLVACTEDQSKAIGQQPKKTIDKVTTDINKAMQQGQGSDRLKEEEPK*
Ga0105081_102622123300009806Groundwater SandMRHLLLSLVLGLSACSPEQSKSIGQQPKKTIDKVTTDINKAMQQGQGSDRLKEEEPK*
Ga0126313_1052286623300009840Serpentine SoilMKYLAPLLLMAALSGCTPEQSTAIGNQPKKTVDKVSTDVTKAMQQGGQDSERLKEDQK*
Ga0126311_1037648933300010045Serpentine SoilMKYLIALLLMAALSGCTPEQSTAIGNQPKKTVDKVSGDVTKAMQQGGQDSERLKEDQK*
Ga0126382_1085388823300010047Tropical Forest SoilMKALVPLFLVLGLCACTPDQSKAIGNQPKATVDKVTTDVNKAMQMQGQNAERNKEDQK*
Ga0136847_1051506943300010391Freshwater SedimentLIAGIFVLASCTEDQSKAIGNIPKKTIDKAATDVTKAMQQGGQDSERLKEEQK*
Ga0134122_1089115123300010400Terrestrial SoilMKYLISLSCVLLVSACTPEQSREIGNQPKKTVDKVTTDINKAMQQQGQDSERLKEDQK*
Ga0137466_103393423300011399SoilLSILPRISLAVFCLALAACTPEQTKALGQQPKKTVDRVTTDVGKAMQQGQGSERLKEESK
Ga0137356_107305423300011402SoilLVLLLAACTEEQSKAIGQQPKKTVDRVTTDVNKAMQQGQGSERLKEEEPK*
Ga0137450_105381623300011407SoilLLGLVACTPEQSREIGNIPKKTMDRATTDVNKAMQNAGQGSERLKEDQK*
Ga0137436_112204823300011423SoilLIFSIALAGCTPEQSKAIGNQPKKTVDKVTTDINKAMQQGGQDSERLKEDQK*
Ga0137439_100664533300011424SoilVLVALLGLAACTPEQSKEIGSQPKKTVDRVTVDVNKAMQNAGQGSERLKEDQK*
Ga0137439_110618823300011424SoilALALAACTPDQSKEIGSIPKKTLDKTSADINKAMQQGQGSERLKEDQQ*
Ga0137429_103200723300011437SoilMACTPEQSREIGNIPKKTMDRATTDVNKAMQNAGQGSERLKEDQK*
Ga0137437_105908833300011442SoilMVLAGCTPEQSKEIGNAPKKTVDKVTTDINKAMQQQGQGSERLKEDQK*
Ga0137453_103171333300012034SoilALAACTEEQSKSVGQIPKKTVDKAAAGINKAMQQGQGSERLKEDQQ*
Ga0137461_119675613300012040SoilLSTLQKTSLVVCLLGLVACTPEQSREIGNIPKKTMDRATTDVNKAMQNAGQGSERLKEDQK*
Ga0137328_101278823300012113SoilVVCLLGLVACTPEQSREIGNIPKKTMDRATTDVNKAMQNAGQGSERLKEDQK*
Ga0137346_102119523300012137SoilAACTEEQSKSVGQIPKRTLDKATGDVQKAMQQGQGSERLKEDQQ*
Ga0137355_106042423300012163SoilLLLAACTPEQSKEIGNLPKKTMDRATTDVNKAMQNAGQGSERLKEDQK*
Ga0150985_10132191523300012212Avena Fatua RhizosphereMNYLTPLLLIAALSACTPEQSTAIGNQPKKTVDKASTDVTKAMQQGGQDSERLKEDQK*
Ga0157296_1037591113300012905SoilMKYLIPLLLLASLSACTPEQSTAIGNQPKKTVDKVSTDVTKAMQQGGQDSERLK
Ga0180096_102560723300014862SoilAALALAACTEEQSKSVGQIPKKTVDKAAAGINKAMQQGQGSERLKEDQQ*
Ga0180080_105384513300014870SoilTLQKTSLVVCLLGLVACTPEQSREIGNIPKKTMDRATTDVNKAMQNAGQGSERLKEDQK*
Ga0180069_105221923300014882SoilLSILLRISLVVLLLAACSEDQSKAIGNIPKKTIDKATLDVSKAMQQGAERLKEEEK*
Ga0132257_10417957023300015373Arabidopsis RhizosphereMKILIPLLLTVGLCACTPEQSKAIGNQPKATVDKVTTDVNKAMQMQGQNAERNKEDQK*
Ga0190266_1078045513300017965SoilMKHSLPILLAMALCACTPEQSKEIGNQPKKTVDKVTTDVGKAMQQGQDSDRLKEDQK
Ga0184615_1013087323300018059Groundwater SedimentLSTLLRISLVLLLAACTPEQSKEIGNIPKKTMDRATTDVNKAMQNAGQGSERLKEDQK
Ga0184637_1024681833300018063Groundwater SedimentLSILPKISFLIVSIFVLASCTEDQSKAIGNIPKKTIDKASVDVNKAMQQGAERLKEEQK
Ga0184637_1055103123300018063Groundwater SedimentMRILLLGLILVLCGCTEDQSKAVGNIPKKTIDKATMDVNKAMQQGQGSDRLKEEQK
Ga0184627_1003861623300018079Groundwater SedimentMRILLLGLILVLCGCTEDQSKAVGNIPKKTIDKATLDVNKAMQQGQGSDRLKEEQK
Ga0184627_1040600323300018079Groundwater SedimentVACTEEQSKAIGQQPKKTVDRVTTDVNKAMQQGQGSERLKEEEPK
Ga0184628_1012060233300018083Groundwater SedimentMVLAGCTPEQSKEIGNAPKKTVDKVTTDINKAMQQQGQGSERLKEDQK
Ga0190265_1007598213300018422SoilRTSLLVFLLAACTEEQSRNIGAQPKKTIDKVTTDVNKAMQSDRLKEDEK
Ga0190272_1019077333300018429SoilVACTEEQSKAIGQQPKKTIDRVTTDVNKAMQQGQGSDRLKEEPEPK
Ga0190270_1218237423300018469SoilMKHFLPILLAMVLCACTPEQSKEIGNQPKKTVDKVTTDVGKAMQQGQDSDRLKEDQK
Ga0190274_1026403723300018476SoilMKPSLPILLALALGACTPEQSKEIGNAPKKTVDKVTTDVNKAMQNAGQGSERLKEEQK
Ga0190274_1200800523300018476SoilEMKYLIPLLLLASLSACTPEQSTAIGNQPKKTVDKVSTDVTKAMQQGGQDSERLKEDQK
Ga0190274_1362786513300018476SoilLSTLQKISLLILSLALAGCTPEQSKAIGNQPKKTVDKVTTDVNKAMQQGGQDSERLKEDQ
Ga0190271_1137685023300018481SoilMKHCLPILLAMALCACTPEQSKEIGNAPKKAVDKVTTDVGKAMQQGQDSDRLKEDQK
Ga0190271_1145304023300018481SoilMKPFFSSILLALALGACTPEQSKEIGNAPKKTVDKVTTDVNKAMQNAGQGSERLKEEQK
Ga0180110_109757423300019208Groundwater SedimentLSTLQKTSLVVCLLGLVACTPEQSREIGNIPKKTMDRATTDVNKAMQNAGQGSERLKEDQ
Ga0180115_126068523300019257Groundwater SedimentMACTPEQSREIGNIPKKTMDRATTDVNKAMQNAGQGSERLKEDQK
Ga0190264_1053794323300019377SoilVACTPEQSKEIGNIPKKTIDKVTTDVNKAMQNAGQGSERLKEEQK
Ga0187892_1000308843300019458Bio-OozeLLLVACTEDQSKAIGQQPKKVIDRATTDVNKAMQQGSDRLKEEQK
Ga0193752_106080823300020027SoilLSILQKTSFLIFSVLLAGCSPEQSKAIGNQPKKTVDKVTTDVGKAMQQGQDSDRLKEDQK
Ga0193717_102588233300020060SoilVVFLAACSEEQSKAIGQQPKKTIDRVTTDVNKAMQQGQGSDRLKEEQEQK
Ga0180118_139930023300020063Groundwater SedimentLVLLLAACTEEQSKAIGQQPKKTVDRVTTDVNKAMQQGQGSERLKEEEPK
Ga0196964_1002678733300020202SoilVLAACSPEQSANVGAQPKKTMDRATTDVNKAMQQGSERLKEKSE
Ga0209320_1028889923300025155SoilLSILLRISLVVLLLAACTEDQSKAIGNIPKKTIDKATVDVNKAMQQGTERLKEEEK
Ga0209320_1037139323300025155SoilMVFSSGCTEEQSRNIGAQPKKTVDRVSTDVNKAMQQGQGSERLKEGDK
Ga0209619_1016949113300025159SoilLSILLRTSLVVLLLAACTEDQSKAIGNIPKKTIDKVTVDVNKAMQQGAERLKEEEK
Ga0209109_1003868843300025160SoilLSILLRISLVVLLLAACTEDQSKAIGNIPKKTIDKATVDVNKAMQQGAERLKEEEK
Ga0209109_1029282423300025160SoilVALLLAACTEEQSKAIGQQPKKTIDRVTTDVNKAMQSDRLKEDGK
Ga0209109_1054205523300025160SoilLLTLLRISLVAVLLLGCTEEQSRAVGAQPKKTIDRVTTDVNKAMQQGQGSDRLKEDDK
Ga0209108_1000882373300025165SoilLSILLRTSLVVLLLAACTEDQSKAIGNIPKKTIDKATVDVNKAMQQGAERLKEEEK
Ga0209002_1014298623300025289SoilLTLLRISLVAVLLVGCTEEQSRAVGAQPKKTVDRVTTDVNKAMQQGQGSERLKEDEK
Ga0209519_1045647523300025318SoilLAACTEDQSKAIGNIPKKTIDKVTVDVNKAMQQGGQGSERLNEEQK
Ga0209520_1041354223300025319SoilLTLLRISLVAVLLVGCTEEQSRAIGAQPKKTIDRVTTDVNKAMQQGQGSERLKEDEK
Ga0209520_1044217713300025319SoilLSILLRTSLVVLLLAACTEDQSKAIGNIPKKTIDKVTVDVNKAMQQGGQGSERLNEEQK
Ga0209341_1038258823300025325SoilMKYLVVALMVFSFGCTEEQSRNIGAQPKKTIDRVTTDVNKAMQSDRLKEDEK
Ga0209751_1013370743300025327SoilMKYLVVALMVFSFGCTEEQSRNIGAQPKKTIDRVTTDVNKAMQSDRL
Ga0210135_100259033300025954Natural And Restored WetlandsALAACTPEQSKEVGRIPKKTVDKTTADVQKAMQQGQGSERLKEDQQ
Ga0209686_107247423300026315SoilMRIVIFIFVIALSACSREQSQSIGQQPKKTVDRVATDVNKAMQQGQGSERLREDDAK
Ga0256867_1025310723300026535SoilMRFLLLCLALALTGCTEEQSRNLGNAPKKTLDRVTTDVNKAMQQGQGSDRLKENE
Ga0209967_100101223300027364Arabidopsis Thaliana RhizosphereMMVLLCGCTEEQSRAIGQQPKKTVDRVTTDVNKAMQQGQGSERLQEGDK
Ga0209981_100555423300027378Arabidopsis Thaliana RhizosphereMRYLVLSMVLALLGCTEEQSRAVGQQPKKTIDRVTTDVNKAMQSDRLKEDGK
Ga0208185_100488633300027533SoilMNHSILVLLVIGLAACTPEQSKALGDQPKKTVDKVTTDVNKAMQNAGQGSERLKEDQK
Ga0209971_101915613300027682Arabidopsis Thaliana RhizosphereMMVLLCGCTEEQSRAIGQQPKKTVDRVTTDVNKAMQQGQGSERLQEGD
Ga0209286_101081243300027713Freshwater SedimentMRFLVFGMMLLLGSCTEDQSRAIGAQPKKTIDRVTTDVNKAMQSDRLKEDGK
Ga0209486_1010564523300027886Agricultural SoilMKYLLAGLMVFALGCTEEQSRNIGAQPKKTIDRVTTDVNKAMRSDRLKEDEK
Ga0209382_1016312033300027909Populus RhizosphereLSTLLRISLVLLLVACTEDQSKAIGQQPKKTVDRVTTDINKAMQQGQGSERLKEEQK
Ga0209885_100310813300027950Groundwater SandMRHLLLSLVLGLSACSPEQSKSIGQQPKKTVDKVTTDMQKAMQQGQGSERLKEEEPK
Ga0307503_1014960933300028802SoilMKHILPFLLMAALSGCTPEQSTAIGNAPKKTVDKVTTDVNKAMQQQGQDSERLKEDQK
Ga0307503_1038796223300028802SoilLSILQKTSILIFSIALAGCTPEQSKAIGNQPKKTVDKVTTDINKAMQQGGQDSERLKEDQ
Ga0307503_1055734523300028802SoilMAALSACTPEQSTAIGNAPKKAVDKVTTDVNKAMQQGGQDSERLKEDQK
Ga0307281_1006155723300028803SoilLSILPRISLVVFSLALAACTPEQSKAIGNAPKKTVDKVTTDIGKAMQQGGQDSERLKEDQ
Ga0247824_1082648313300028809SoilCTEEQSRAVGQQPKKTIDRVTTDVNKAMQSDRLKEDGK
Ga0299906_1030865523300030606SoilLSTLLRISLLVLLLAACTEEQSRSIGAQPKKTIDRVTTDVNKAMQSDRLKEDEK
Ga0268386_1019656813300030619SoilLCLALALTGCTEEQSRNLGNAPKKTIDRVTTDVNKAMQQGQRSDRLKENE
Ga0302046_1007145423300030620SoilMKYLVLALMVFSFGCTEEQSRNIGAQPKKTIDRVTTDVNKAMQSNRLKEDEK
Ga0302046_1037015923300030620SoilLAIALSGCTEEQSRNIGAQPKKTIDRVTTDVNKAMQSDRLKEDEK
Ga0307499_1001948433300031184SoilMALAGCTPEQSKAIGNQPKKTVDKVTTDINKAMQQGGQDSERLKEDQK
Ga0307497_1006899023300031226SoilLSILQKTSILIFSIALVGCTPEQSKAIGNQPKKTVDKVTSDVTKAMQQGGQDSERLKEDQ
Ga0299913_1011388833300031229SoilLSTLLRISLVVLFLAACTEEQSKAVGQQPKKTIDRVTTDVNKAMQRGSERLKEDEK
Ga0307505_1047715223300031455SoilMKHSLPILLAMALCACTPEQSKEIGSQPKKTVDRVTTDVNKAMQNAGQGSERLKEDQK
Ga0314826_13767523300031493SoilVLLLAACTEDQSKAVGQQPKKAIDGAASKVGELMQQGQGSERLKEEQK
Ga0247727_100000661173300031576BiofilmMRYLLLALILALTGCTEDQSKAIGQQPKKTIDRVTTDVNKAMQQGQGSDRLKEEQK
Ga0247727_1019827933300031576BiofilmLSTLQKISLLVFSLALVACTEEQSKAIGQQPKKTVDRVTTDINKAMQQGQGSDRLKEDQK
Ga0307413_1179899723300031824RhizosphereMAALSACTPEQSTAIGNQPKKTVDKVSTDVTKAMQQGGQDSERLKEDQK
Ga0307407_1083457023300031903RhizosphereVLLLAACTEEQSRAIGQQPKKTVDRVSTDVNKAMQQGQGSERLKEKE
Ga0326597_1022344743300031965SoilLLTLLRISLVAVLLVGCTEEQSRSVGAQPKKTVDRVTTDVNKAMQQGQGSERLKEDEK
Ga0326597_1126677123300031965SoilMRYLFLSLIVLLSSCTEEQSRNIGAQPKKTVDRVTTDVGKAMQQGQGSERLKEDDK
Ga0307409_10200482613300031995RhizosphereGSRRTALSILLRISLVLLLAACTEEQSRAIGQQPKKTVDRVSTDVNKAMQQGQGSERLKEKE
Ga0307416_10347003923300032002RhizosphereMKYLAPLLLMAALSACTPEQSTAIGNQPKKTVDKVTTDVTKAMQQGGQDSERLKEDQK
Ga0315910_1055248723300032144SoilVLLLLACTEEQSRAIGQQPKKTLDRVSTDVNKAMQQGQGSERLKEKE
Ga0315912_1004063443300032157SoilMKYLILLGLLAGLAACTPEQSKALGDQPKKTVDKVTTDVNKAMQNAGQGSERLKEDDK
Ga0315912_1005702243300032157SoilLSTLLRISLLAFLLAACTEDQSKAVGNIPKKTIDKTTVDVNKAMQQGQGSERLKEEQK
Ga0315912_1014200243300032157SoilEKEASRRMGDKPKQTIDKVTTDVNKAMQQQGQDSERLKEDQK
Ga0315912_1038064033300032157SoilLSTLPRTSVLVLALLGLAACTPEQSKEIGNAPKKTVDRVTTDVNKAMQNAGQGSERLKEEQK
Ga0307471_10312766023300032180Hardwood Forest SoilMKYLIALSCVLLVSACTPEQSREIGNQPKKTVDKVTTDINKAMQQQGQDSERLKEDQK
Ga0335085_1041503423300032770SoilLSTLQKISPLVLSLLLAACTPEQSKEIGNQPKKTVDKVTTDINKAMQQGGQDSERLKEDQ
Ga0214472_1007137323300033407SoilMRYLLLSLIVLLSSCTEEQSRNIGAQPKKTVDRVTTDVGKAMQQGQGSERLKEDDK
Ga0214471_1001747743300033417SoilLLLLAACTEEQSKAIGQQPKKTVDRVTTDVNKAMQHGQGSERLKEEEPK
Ga0214471_1009218033300033417SoilVLLLGCTEEQSRAVGAQPKKTIDRVTTDVNKAMQSNRLKEDEK
Ga0326726_1061029323300033433Peat SoilLSTLQKTSLLIFAVALAACTPEQSKEIGNAPKKTMDKVTTDINKAMQQGGQDSERLKEDQ
Ga0364930_0024296_335_4873300033814SedimentVAALALAACSEEQSKSVGQIPKKTLDKAAADINKAMQQGQDSERLKEDQK
Ga0364946_091104_114_2813300033815SedimentLSILLRISLVILLAACTEDQSKAIGNIPKKTIDKATVDVNKAMQQGAERLKEEQK
Ga0364934_0185095_295_4503300034178SedimentVASALVLAACSEEQSKSVGQVPKKTVDKAAADINRAMQQGQGSERLKEDQK
Ga0370495_0232291_234_4193300034257Untreated Peat SoilLSTLPRISLVVLSLVLAACTPEQSKAIGQQPKKAIDKVTTDVNKAMQQQGQDSERLKEDQ
Ga0364943_0429927_340_4953300034354SedimentLLVIGLAACTPEQSKALGDQPKKTVDKVTTDVNKAMQNAGQGSERLKEDQK
Ga0370497_0057024_1_1833300034965Untreated Peat SoilLSTLPRISLVVLSLALAACTPEQSKAIGQQPKKTIDKVTNDVNKAMQQQGQGSERLKEDQ


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.