Metagenome / Metatranscriptome Family F053869

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F053869
Family Type	Metagenome / Metatranscriptome
Number of Sequences	140
Average Sequence Length	38 residues
Representative Sequence	MILSILVTLAFVATLAFMLVRAFTGPVRHRHSRPVH
Number of Associated Samples	84
Number of Associated Scaffolds	140

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	70.00 %
% of genes near scaffold ends (potentially truncated)	33.57 %
% of genes from short scaffolds (< 2000 bps)	71.43 %
Associated GOLD sequencing projects	78
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (69.286 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (27.143 % of family members)
Environment Ontology (ENVO)	Unclassified (35.714 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (30.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 58.33% β-sheet: 0.00% Coil/Unstructured: 41.67%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 140 Family Scaffolds
PF00282	Pyridoxal_deC	19.29
PF10009	DUF2252	17.86
PF00999	Na_H_Exchanger	5.00
PF04978	DUF664	2.86
PF12840	HTH_20	2.86
PF00106	adh_short	1.43
PF13399	LytR_C	1.43
PF08450	SGL	0.71
PF07885	Ion_trans_2	0.71
PF00437	T2SSE	0.71
PF13964	Kelch_6	0.71
PF14358	DUF4405	0.71
PF01725	Ham1p_like	0.71
PF06182	ABC2_membrane_6	0.71
PF10604	Polyketide_cyc2	0.71
PF09587	PGA_cap	0.71
PF11695	DUF3291	0.71
PF12728	HTH_17	0.71
PF02371	Transposase_20	0.71
PF00665	rve	0.71
PF13701	DDE_Tnp_1_4	0.71
PF13586	DDE_Tnp_1_2	0.71
PF04542	Sigma70_r2	0.71
PF05977	MFS_3	0.71
PF13474	SnoaL_3	0.71
PF17164	DUF5122	0.71
PF02604	PhdYeFM_antitox	0.71
PF13191	AAA_16	0.71

COG ID	Name	Functional Category	% Frequency in 140 Family Scaffolds
COG0076	Glutamate or tyrosine decarboxylase or a related PLP-dependent protein	Amino acid transport and metabolism [E]	19.29
COG3004	Na+/H+ antiporter NhaA	Energy production and conversion [C]	5.00
COG4651	Predicted Kef-type K+ transport protein, K+/H+ antiporter domain	Inorganic ion transport and metabolism [P]	5.00
COG3263	NhaP-type Na+/H+ and K+/H+ antiporter with C-terminal TrkAC and CorC domains	Energy production and conversion [C]	5.00
COG0025	NhaP-type Na+/H+ or K+/H+ antiporter	Inorganic ion transport and metabolism [P]	5.00
COG0475	Kef-type K+ transport system, membrane component KefB	Inorganic ion transport and metabolism [P]	5.00
COG3316	Transposase (or an inactivated derivative), DDE domain	Mobilome: prophages, transposons [X]	0.71
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	0.71
COG0127	Inosine/xanthosine triphosphate pyrophosphatase, all-alpha NTP-PPase family	Nucleotide transport and metabolism [F]	0.71
COG4584	Transposase	Mobilome: prophages, transposons [X]	0.71
COG4118	Antitoxin component of toxin-antitoxin stability system, DNA-binding transcriptional repressor	Defense mechanisms [V]	0.71
COG3694	ABC-type uncharacterized transport system, permease component	General function prediction only [R]	0.71
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.71
COG3391	DNA-binding beta-propeller fold protein YncE	General function prediction only [R]	0.71
COG3386	Sugar lactone lactonase YvrE	Carbohydrate transport and metabolism [G]	0.71
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.71
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.71
COG2826	Transposase and inactivated derivatives, IS30 family	Mobilome: prophages, transposons [X]	0.71
COG2814	Predicted arabinose efflux permease AraJ, MFS family	Carbohydrate transport and metabolism [G]	0.71
COG2801	Transposase InsO and inactivated derivatives	Mobilome: prophages, transposons [X]	0.71
COG2161	Antitoxin component YafN of the YafNO toxin-antitoxin module, PHD/YefM family	Defense mechanisms [V]	0.71
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.71

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	69.29 %
Unclassified	root	N/A	30.71 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	69.29 %
Unclassified	root	N/A	30.71 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	69.29 %
Unclassified	root	N/A	30.71 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	33.57 %
Unclassified	root	N/A	30.71 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	32.14 %
Unclassified	root	N/A	30.71 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.71 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	20.71 %
Nitriliruptoria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria	0.71 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.71 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.71 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	2.86 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1.43 %
Thermoleophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales	0.71 %
Nitriliruptorales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Nitriliruptorales	0.71 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.71 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.71 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.71 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	0.71 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.71 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.71 %
Micrococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae	2.14 %
Nitriliruptoraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Nitriliruptorales → Nitriliruptoraceae	0.71 %
unclassified Streptosporangiales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → unclassified Streptosporangiales	0.71 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.71 %
Thermoleophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae	0.71 %
Intrasporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae	0.71 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.71 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.71 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.71 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.71 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.71 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.71 %
Arthrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter	2.14 %
Sciscionella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Sciscionella	0.71 %
Nitriliruptor	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Nitriliruptorales → Nitriliruptoraceae → Nitriliruptor	0.71 %
unclassified Thermoleophilaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae	0.71 %
Streptosporangiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → unclassified Streptosporangiales → Streptosporangiales bacterium	0.71 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.71 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.71 %
Intrasporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae	0.71 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.71 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.71 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.71 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.71 %
Arthrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter	2.14 %
unclassified Nitriliruptor	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Nitriliruptorales → Nitriliruptoraceae → Nitriliruptor → unclassified Nitriliruptor	0.71 %
Thermoleophilaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	0.71 %
Sciscionella marina	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Sciscionella → Sciscionella marina	0.71 %
Streptomyces ipomoeae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces ipomoeae	0.71 %
Streptosporangiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → unclassified Streptosporangiales → Streptosporangiales bacterium	0.71 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.71 %
Intrasporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae	0.71 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.71 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.71 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.71 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.71 %
Arthrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter	2.14 %
Nitriliruptor sp.	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Nitriliruptorales → Nitriliruptoraceae → Nitriliruptor → unclassified Nitriliruptor → Nitriliruptor sp.	0.71 %
Thermoleophilaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	0.71 %
Sciscionella marina	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Sciscionella → Sciscionella marina	0.71 %
Streptomyces ipomoeae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces ipomoeae	0.71 %
Streptosporangiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → unclassified Streptosporangiales → Streptosporangiales bacterium	0.71 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.71 %
Intrasporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae	0.71 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.71 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.71 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.71 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.71 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000858\|JGI10213J12805_10316548	All Organisms → cellular organisms → Bacteria	1234	Open in IMG/M
3300003203\|JGI25406J46586_10208475	Not Available	571	Open in IMG/M
3300003373\|JGI25407J50210_10174630	Not Available	530	Open in IMG/M
3300005562\|Ga0058697_10006291	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3810	Open in IMG/M
3300005562\|Ga0058697_10052352	All Organisms → cellular organisms → Bacteria	1569	Open in IMG/M
3300005562\|Ga0058697_10245589	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	832	Open in IMG/M
3300005562\|Ga0058697_10549395	All Organisms → cellular organisms → Bacteria	596	Open in IMG/M
3300005937\|Ga0081455_10039084	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4196	Open in IMG/M
3300005937\|Ga0081455_10662632	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	670	Open in IMG/M
3300005981\|Ga0081538_10001653	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	22830	Open in IMG/M
3300005981\|Ga0081538_10002981	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	16140	Open in IMG/M
3300005981\|Ga0081538_10004598	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	12685	Open in IMG/M
3300005981\|Ga0081538_10005421	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	11462	Open in IMG/M
3300005981\|Ga0081538_10006715	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	10071	Open in IMG/M
3300005981\|Ga0081538_10007256	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	9612	Open in IMG/M
3300005981\|Ga0081538_10009241	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	8257	Open in IMG/M
3300005981\|Ga0081538_10021043	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4781	Open in IMG/M
3300005981\|Ga0081538_10071607	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1906	Open in IMG/M
3300005981\|Ga0081538_10153078	All Organisms → cellular organisms → Bacteria	1040	Open in IMG/M
3300005981\|Ga0081538_10179833	All Organisms → cellular organisms → Bacteria	907	Open in IMG/M
3300005981\|Ga0081538_10257375	All Organisms → cellular organisms → Bacteria	661	Open in IMG/M
3300005981\|Ga0081538_10363900	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	523	Open in IMG/M
3300005981\|Ga0081538_10371001	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	517	Open in IMG/M
3300005985\|Ga0081539_10001841	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	33456	Open in IMG/M
3300005985\|Ga0081539_10046167	All Organisms → cellular organisms → Bacteria	2499	Open in IMG/M
3300006046\|Ga0066652_100266306	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1507	Open in IMG/M
3300006049\|Ga0075417_10002772	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5370	Open in IMG/M
3300006844\|Ga0075428_100986979	All Organisms → cellular organisms → Bacteria	892	Open in IMG/M
3300006845\|Ga0075421_101599786	All Organisms → cellular organisms → Bacteria	709	Open in IMG/M
3300006854\|Ga0075425_101189119	Not Available	867	Open in IMG/M
3300006854\|Ga0075425_101920937	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	663	Open in IMG/M
3300009100\|Ga0075418_10011053	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	10088	Open in IMG/M
3300009100\|Ga0075418_10659739	All Organisms → cellular organisms → Bacteria	1127	Open in IMG/M
3300009147\|Ga0114129_13168383	All Organisms → cellular organisms → Bacteria	536	Open in IMG/M
3300009162\|Ga0075423_11800237	Not Available	660	Open in IMG/M
3300009789\|Ga0126307_10046245	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3393	Open in IMG/M
3300009789\|Ga0126307_10242354	Not Available	1449	Open in IMG/M
3300009813\|Ga0105057_1004456	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae	1793	Open in IMG/M
3300009816\|Ga0105076_1005289	Not Available	2069	Open in IMG/M
3300009840\|Ga0126313_10011825	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5553	Open in IMG/M
3300009840\|Ga0126313_10024514	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4060	Open in IMG/M
3300009840\|Ga0126313_10227035	Not Available	1441	Open in IMG/M
3300009840\|Ga0126313_10655646	All Organisms → cellular organisms → Bacteria	848	Open in IMG/M
3300010036\|Ga0126305_10084254	Not Available	1879	Open in IMG/M
3300010038\|Ga0126315_10008727	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4712	Open in IMG/M
3300010038\|Ga0126315_10026354	All Organisms → cellular organisms → Bacteria	2985	Open in IMG/M
3300010041\|Ga0126312_10296018	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → unclassified Streptosporangiales → Streptosporangiales bacterium	1141	Open in IMG/M
3300010041\|Ga0126312_10329258	Not Available	1080	Open in IMG/M
3300010044\|Ga0126310_10521217	Not Available	872	Open in IMG/M
3300010145\|Ga0126321_1073758	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter	782	Open in IMG/M
3300010145\|Ga0126321_1079603	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter	618	Open in IMG/M
3300011000\|Ga0138513_100015392	All Organisms → cellular organisms → Bacteria	1008	Open in IMG/M
3300012021\|Ga0120192_10002866	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2200	Open in IMG/M
3300012021\|Ga0120192_10018340	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1083	Open in IMG/M
3300012204\|Ga0137374_10427895	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1045	Open in IMG/M
3300012938\|Ga0162651_100058507	All Organisms → cellular organisms → Bacteria	619	Open in IMG/M
3300012938\|Ga0162651_100093580	Not Available	510	Open in IMG/M
3300012941\|Ga0162652_100010510	All Organisms → cellular organisms → Bacteria	1140	Open in IMG/M
3300012941\|Ga0162652_100076757	All Organisms → cellular organisms → Bacteria	576	Open in IMG/M
3300014487\|Ga0182000_10002862	All Organisms → cellular organisms → Bacteria	3586	Open in IMG/M
3300014487\|Ga0182000_10037991	All Organisms → cellular organisms → Bacteria	1382	Open in IMG/M
3300017965\|Ga0190266_10155251	Not Available	1035	Open in IMG/M
3300017965\|Ga0190266_11172076	Not Available	530	Open in IMG/M
3300018027\|Ga0184605_10127672	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	1135	Open in IMG/M
3300018027\|Ga0184605_10500682	Not Available	529	Open in IMG/M
3300018031\|Ga0184634_10021494	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2456	Open in IMG/M
3300018031\|Ga0184634_10278360	All Organisms → cellular organisms → Bacteria	768	Open in IMG/M
3300018072\|Ga0184635_10022756	All Organisms → cellular organisms → Bacteria	2309	Open in IMG/M
3300018076\|Ga0184609_10001039	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	8552	Open in IMG/M
3300018081\|Ga0184625_10012265	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Sciscionella → Sciscionella marina	3968	Open in IMG/M
3300018081\|Ga0184625_10019731	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3208	Open in IMG/M
3300018422\|Ga0190265_10040244	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3979	Open in IMG/M
3300018432\|Ga0190275_13016964	Not Available	544	Open in IMG/M
3300018465\|Ga0190269_10136509	All Organisms → cellular organisms → Bacteria	1250	Open in IMG/M
3300018465\|Ga0190269_10892610	All Organisms → cellular organisms → Bacteria	655	Open in IMG/M
3300018466\|Ga0190268_11117123	Not Available	643	Open in IMG/M
3300018466\|Ga0190268_11649964	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	568	Open in IMG/M
3300018469\|Ga0190270_10477156	All Organisms → cellular organisms → Bacteria	1181	Open in IMG/M
3300018469\|Ga0190270_10794075	All Organisms → cellular organisms → Bacteria	952	Open in IMG/M
3300019377\|Ga0190264_10177740	All Organisms → cellular organisms → Bacteria	1140	Open in IMG/M
3300022195\|Ga0222625_1323024	All Organisms → cellular organisms → Bacteria	751	Open in IMG/M
3300022534\|Ga0224452_1052091	All Organisms → cellular organisms → Bacteria	1217	Open in IMG/M
3300022756\|Ga0222622_10240738	Not Available	1221	Open in IMG/M
3300022756\|Ga0222622_10313283	Not Available	1084	Open in IMG/M
3300026667\|Ga0208347_100389	All Organisms → cellular organisms → Bacteria	596	Open in IMG/M
3300026790\|Ga0208710_104209	Not Available	691	Open in IMG/M
3300027561\|Ga0209887_1006167	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3339	Open in IMG/M
3300027577\|Ga0209874_1139444	Not Available	553	Open in IMG/M
3300027750\|Ga0209461_10045439	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces ipomoeae	879	Open in IMG/M
3300027750\|Ga0209461_10096613	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter	665	Open in IMG/M
3300027809\|Ga0209574_10038424	All Organisms → cellular organisms → Bacteria	1175	Open in IMG/M
3300027873\|Ga0209814_10005443	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4851	Open in IMG/M
3300028587\|Ga0247828_10240777	All Organisms → cellular organisms → Bacteria	967	Open in IMG/M
3300028589\|Ga0247818_10049336	All Organisms → cellular organisms → Bacteria	2705	Open in IMG/M
3300028590\|Ga0247823_10103162	All Organisms → cellular organisms → Bacteria	2185	Open in IMG/M
3300028592\|Ga0247822_10063695	All Organisms → cellular organisms → Bacteria	2598	Open in IMG/M
3300028705\|Ga0307276_10019047	All Organisms → cellular organisms → Bacteria	1326	Open in IMG/M
3300028717\|Ga0307298_10040974	All Organisms → cellular organisms → Bacteria	1254	Open in IMG/M
3300028718\|Ga0307307_10212132	Not Available	614	Open in IMG/M
3300028719\|Ga0307301_10000903	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	8517	Open in IMG/M
3300028720\|Ga0307317_10050476	Not Available	1332	Open in IMG/M
3300028722\|Ga0307319_10003056	All Organisms → cellular organisms → Bacteria	5123	Open in IMG/M
3300028722\|Ga0307319_10130953	All Organisms → cellular organisms → Bacteria	810	Open in IMG/M
3300028722\|Ga0307319_10299652	Not Available	532	Open in IMG/M
3300028744\|Ga0307318_10193188	All Organisms → cellular organisms → Bacteria	703	Open in IMG/M
3300028771\|Ga0307320_10076887	All Organisms → cellular organisms → Bacteria	1252	Open in IMG/M
3300028778\|Ga0307288_10143479	All Organisms → cellular organisms → Bacteria	895	Open in IMG/M
3300028878\|Ga0307278_10010999	All Organisms → cellular organisms → Bacteria	4228	Open in IMG/M
3300028878\|Ga0307278_10011750	All Organisms → cellular organisms → Bacteria	4089	Open in IMG/M
3300028881\|Ga0307277_10003906	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5725	Open in IMG/M
3300030496\|Ga0268240_10012798	Not Available	1467	Open in IMG/M
3300030510\|Ga0268243_1003582	All Organisms → cellular organisms → Bacteria	2639	Open in IMG/M
3300030514\|Ga0268253_10349852	Not Available	524	Open in IMG/M
3300030783\|Ga0102752_1006015	Not Available	537	Open in IMG/M
3300030829\|Ga0308203_1035421	Not Available	712	Open in IMG/M
3300030829\|Ga0308203_1045828	Not Available	651	Open in IMG/M
3300030830\|Ga0308205_1024571	Not Available	710	Open in IMG/M
3300030830\|Ga0308205_1027569	Not Available	682	Open in IMG/M
3300030830\|Ga0308205_1037217	Not Available	614	Open in IMG/M
3300030902\|Ga0308202_1038066	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Nitriliruptorales → Nitriliruptoraceae → Nitriliruptor → unclassified Nitriliruptor → Nitriliruptor sp.	840	Open in IMG/M
3300030903\|Ga0308206_1069565	Not Available	738	Open in IMG/M
3300030903\|Ga0308206_1151369	Not Available	559	Open in IMG/M
3300030903\|Ga0308206_1200702	Not Available	505	Open in IMG/M
3300031039\|Ga0102760_11003839	All Organisms → cellular organisms → Bacteria	763	Open in IMG/M
3300031058\|Ga0308189_10191728	Not Available	734	Open in IMG/M
3300031091\|Ga0308201_10275974	Not Available	589	Open in IMG/M
3300031091\|Ga0308201_10333083	Not Available	551	Open in IMG/M
3300031422\|Ga0308186_1019018	Not Available	653	Open in IMG/M
3300031548\|Ga0307408_100091786	All Organisms → cellular organisms → Bacteria	2294	Open in IMG/M
3300031548\|Ga0307408_100332923	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	1283	Open in IMG/M
3300031548\|Ga0307408_101037176	All Organisms → cellular organisms → Bacteria	758	Open in IMG/M
3300031903\|Ga0307407_11031179	Not Available	637	Open in IMG/M
3300031995\|Ga0307409_100352383	Not Available	1389	Open in IMG/M
3300031995\|Ga0307409_100967555	Not Available	868	Open in IMG/M
3300031995\|Ga0307409_101385458	All Organisms → cellular organisms → Bacteria	729	Open in IMG/M
3300031995\|Ga0307409_102520468	Not Available	543	Open in IMG/M
3300032002\|Ga0307416_102123868	All Organisms → cellular organisms → Bacteria	663	Open in IMG/M
3300032002\|Ga0307416_102684702	All Organisms → cellular organisms → Bacteria	595	Open in IMG/M
3300032159\|Ga0268251_10055770	Not Available	1309	Open in IMG/M
3300032159\|Ga0268251_10315817	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	653	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	64.29%
Host-Associated	Host-Associated	35.71%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	54.29%
Plants	Host-Associated → Plants	35.71%
Aquatic	Environmental → Aquatic	10.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	50.71%
Rhizosphere	Host-Associated → Plants → Rhizosphere	14.29%
Roots	Host-Associated → Plants → Roots	10.71%
Sediment	Environmental → Aquatic → Sediment	7.86%
Phylloplane	Host-Associated → Plants → Phylloplane	5.71%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	3.57%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.57%
Freshwater	Environmental → Aquatic → Freshwater	2.14%
Phyllosphere	Host-Associated → Plants → Phyllosphere	1.43%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	46.43%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	14.29%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	10.71%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	7.86%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified	5.71%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	3.57%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.57%
Sand	Environmental → Terrestrial → Soil → Sand	2.86%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	1.43%
Loam	Environmental → Terrestrial → Soil → Loam	1.43%
Phylloplane/Leaf Surface	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface	1.43%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.71%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	40.71%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	14.29%
Unclassified	Host-Associated → Plants → Roots → Rhizosphere → Unclassified	10.71%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	7.86%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified	5.71%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	3.57%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.57%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.86%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	2.86%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	1.43%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.43%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.43%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.43%
Unclassified	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified	1.43%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.71%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	27.14%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Unclassified → Tabebuia Heterophylla Rhizosphere	10.71%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	8.57%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	7.14%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	7.14%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	5.71%
Agave	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave	5.71%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	3.57%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	3.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.86%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	2.86%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.14%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	1.43%
Terrestrial	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial	1.43%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.43%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.43%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.43%
Agave	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified → Agave	1.43%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.71%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.71%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000858	Soil microbial communities from Great Prairies - Wisconsin Native Prairie soil	Environmental	Open in IMG/M
3300003203	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2	Host-Associated	Open in IMG/M
3300003373	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1	Host-Associated	Open in IMG/M
3300005562	Agave microbial communities from Guanajuato, Mexico - As.Ma.e	Host-Associated	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300005981	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1	Host-Associated	Open in IMG/M
3300005985	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2	Host-Associated	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009813	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_10_20	Environmental	Open in IMG/M
3300009816	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_0_10	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010145	Soil microbial communities from Hawaii, USA to study soil gas exchange rates - KP-HI-INT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300011000	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t6i015	Environmental	Open in IMG/M
3300012021	Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - T1	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012938	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t2i015	Environmental	Open in IMG/M
3300012941	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t4i015	Environmental	Open in IMG/M
3300014487	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG	Environmental	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018031	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300022195	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022534	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300026667	Grasslands soil microbial communities from Gorham, Kansas, USA that are Nitrogen fertilized -NN613 (SPAdes)	Environmental	Open in IMG/M
3300026790	Grasslands soil microbial communities from Gorham, Kansas, USA that are Nitrogen fertilized -NN607 (SPAdes)	Environmental	Open in IMG/M
3300027561	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_30_40 (SPAdes)	Environmental	Open in IMG/M
3300027577	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027750	Agave microbial communities from Guanajuato, Mexico - As.Ma.rz (SPAdes)	Host-Associated	Open in IMG/M
3300027809	Agave microbial communities from Guanajuato, Mexico - Mg.Ma.rz (SPAdes)	Host-Associated	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028587	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3	Environmental	Open in IMG/M
3300028589	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day1	Environmental	Open in IMG/M
3300028590	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day30	Environmental	Open in IMG/M
3300028592	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30	Environmental	Open in IMG/M
3300028705	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_115	Environmental	Open in IMG/M
3300028717	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_158	Environmental	Open in IMG/M
3300028718	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194	Environmental	Open in IMG/M
3300028719	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182	Environmental	Open in IMG/M
3300028720	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_357	Environmental	Open in IMG/M
3300028722	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368	Environmental	Open in IMG/M
3300028744	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_367	Environmental	Open in IMG/M
3300028771	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369	Environmental	Open in IMG/M
3300028778	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300030496	Bulk soil microbial communities from Mexico - Penjamo (Pe) metaG (v2)	Environmental	Open in IMG/M
3300030510	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG (v2)	Environmental	Open in IMG/M
3300030514	Agave microbial communities from Guanajuato, Mexico - Mg.Ma.rz (v2)	Host-Associated	Open in IMG/M
3300030783	Forest soil microbial communities from USA, for metatranscriptomics studies - Jemez Pines PI 3C (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030829	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_357 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030830	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_368 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030902	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_356 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030903	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_369 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031039	Forest soil microbial communities from USA, for metatranscriptomics studies - Jemez Pines PI 6C (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031058	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_184 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031091	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_355 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031422	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_181 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031903	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1	Host-Associated	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032159	Agave microbial communities from Guanajuato, Mexico - As.Ma.e (v2)	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10213J12805_103165482	3300000858	Soil	MILSVLVTLAFVATLLWMLVRAFTGPIRPRHRRPVH*
JGI25406J46586_102084752	3300003203	Tabebuia Heterophylla Rhizosphere	MILSILVTLAFVATLAFMLVRAFTGPVRHRHSRPVHDAGRP
JGI25407J50210_101746301	3300003373	Tabebuia Heterophylla Rhizosphere	PTERSRRMILSILVTLAFVATLLFMLVRAFTGPVRHRHGRPVH*
Ga0058697_100062913	3300005562	Agave	MILSVFVTLAFVATLLWMLVRAFTGPMRHRHRRPVH*
Ga0058697_100523522	3300005562	Agave	MILSILVTLAFVATLAFMLVRAFTGPVRPRHGRPVH*
Ga0058697_102455892	3300005562	Agave	MILSILVTLAFVATLAFMLVRAFTGPVRHRHSRPVH*
Ga0058697_105493952	3300005562	Agave	MILSILVTLAFVTTLAFMLVRAFTGPVRHRHSRPVH*
Ga0081455_100390842	3300005937	Tabebuia Heterophylla Rhizosphere	MILSILVTLAFVATLLFMLVRAFTGPIRHRHGRPVH*
Ga0081455_106626322	3300005937	Tabebuia Heterophylla Rhizosphere	MILSVLVTLAFVVTLLWMLVRAFTGPIRHRHHRPVH*
Ga0081538_1000165326	3300005981	Tabebuia Heterophylla Rhizosphere	MILSILVTLAFVATLLFMLVRAFTGPVRPRRSRPVH*
Ga0081538_1000298123	3300005981	Tabebuia Heterophylla Rhizosphere	MILSILVTLLFVATLAFMLVRAFTGPIRHRHGRPVH*
Ga0081538_100045982	3300005981	Tabebuia Heterophylla Rhizosphere	MILSILVTLAFVATLAFMLVRAFTGPLRRRHGRPVH*
Ga0081538_100054215	3300005981	Tabebuia Heterophylla Rhizosphere	MVLSILVTLAFVATLLFMVVRAFTGPLRHRHRRRPVH*
Ga0081538_100067156	3300005981	Tabebuia Heterophylla Rhizosphere	MILSILVTLAFVATLAFMLVRAFTGPVRHRHGRPVH*
Ga0081538_100072564	3300005981	Tabebuia Heterophylla Rhizosphere	MILSILVTLAFVATLLFMLVRAFTGPVRHRHGRPVH*
Ga0081538_100092417	3300005981	Tabebuia Heterophylla Rhizosphere	MVLSLLVTLAFVATLLWMVVRAFTGPVRHRQRRPVH*
Ga0081538_100210434	3300005981	Tabebuia Heterophylla Rhizosphere	MILSILATLVFVAALAFMLVRAFTGPVRHRHGRAVH*
Ga0081538_100716072	3300005981	Tabebuia Heterophylla Rhizosphere	MILSVLVTLAFVATLLWMLVRAFTGPVRHRHRRPAH*
Ga0081538_101530782	3300005981	Tabebuia Heterophylla Rhizosphere	MILSILVTLGFVATLVFMLVRAFTGPVRHRHGRPVH*
Ga0081538_101798333	3300005981	Tabebuia Heterophylla Rhizosphere	PTERSRRMILSILVTLAFVATLAFMLVRAFTGPVRPRRSRPVH*
Ga0081538_102573752	3300005981	Tabebuia Heterophylla Rhizosphere	MILSILATLVFVAALVFMLVRAFTGPVRHRHGRPVH*
Ga0081538_103639002	3300005981	Tabebuia Heterophylla Rhizosphere	MILSILVTLAFVATLAFMLVRAFTGPVRHRHGRALH*
Ga0081538_103710012	3300005981	Tabebuia Heterophylla Rhizosphere	MILSILVTLAFVATLAFMLVRAFTGPVRHRRGRPVH*
Ga0081539_1000184140	3300005985	Tabebuia Heterophylla Rhizosphere	MILSILVTLAFVATLAFMLVRAFTGPVRPRRGRPVH*
Ga0081539_100461672	3300005985	Tabebuia Heterophylla Rhizosphere	MILSILVALAFVATLAFMLVRAFTGPVRSRHSRPVH*
Ga0066652_1002663062	3300006046	Soil	MILSILVTLAFVTTLAFMLVRAFTGPVRPRHGRPVH*
Ga0075417_100027724	3300006049	Populus Rhizosphere	MILSILVTLAFVAALAFMLVRAFTGPVRHRRGRPVH*
Ga0075428_1009869792	3300006844	Populus Rhizosphere	MILSILVTLAFVATLAFMLVRAFTGPVRHRRSRPVH*
Ga0075421_1015997861	3300006845	Populus Rhizosphere	MILSILVTLVFVALLAFILVRAFTGPVRHRHSRPVH*
Ga0075425_1011891192	3300006854	Populus Rhizosphere	RMILSILVTLAFVATLAFVLVRAFTGPVRHRHGRPVH*
Ga0075425_1019209372	3300006854	Populus Rhizosphere	MILSILVTLAFVAALASMLVRAFTGPVRHRRGRPVH*
Ga0075418_100110534	3300009100	Populus Rhizosphere	MILSILVTLAFVAALAFMLVRAFTGPVRHRRGWPVH*
Ga0075418_106597392	3300009100	Populus Rhizosphere	MILSILVTLVFVALLAFILVRAFTGPVRHRHGRPVH*
Ga0114129_131683832	3300009147	Populus Rhizosphere	MILSILVTLVFVALLAFILVRAFTGPVRHRHSRPIR*
Ga0075423_118002371	3300009162	Populus Rhizosphere	MILSILVTLAFVATLAFMLVRAFTGPVRSRHSRPLH*
Ga0126307_100462452	3300009789	Serpentine Soil	MILSILVALAFVATLAFMLVRAFTGPARPRHSRAVH*
Ga0126307_102423541	3300009789	Serpentine Soil	NGRERGMILSILVTLAFVATLLWMLVRAFTGPIRHRHRLPVH*
Ga0105057_10044563	3300009813	Groundwater Sand	RTEPTEGRRGMILSVLVTLAFVATLLWMLVRAFTGPIRHRHRRPVH*
Ga0105076_10052891	3300009816	Groundwater Sand	MILSVLVTLAFVATLLWMVVRAFTGPIHHRHRRSVH*
Ga0126313_100118254	3300009840	Serpentine Soil	MVLSILVTSAFVATLLFMVVRAFTGPLRHRHRRRLVH*
Ga0126313_100245144	3300009840	Serpentine Soil	MILSILVALTFVATLLFMLVRAFTGPVRPRHSRPVH*
Ga0126313_102270352	3300009840	Serpentine Soil	MILSILVTLAFVATLLWMLVRAFTGPIRHRHRLPVH*
Ga0126313_106556462	3300009840	Serpentine Soil	WQREPTERSRRMILSILVTLAFVATLLFMLVRAFTGPIRHRHSRPVH*
Ga0126305_100842542	3300010036	Serpentine Soil	MILSILVTLAFVATLLWMLVRAFTSPMRHQHRRPVH*
Ga0126315_100087275	3300010038	Serpentine Soil	MILSILVTLAFVATLLFMLVRAFTGPIRHRHSRPVH*
Ga0126315_100263544	3300010038	Serpentine Soil	MILSILVTLAFVTTLAFMLVRAFTGPARHRHGRPVH*
Ga0126312_102960182	3300010041	Serpentine Soil	MVLSILVTLAFVATLLFMVVRAFTGPLRHRHRRRLVH*
Ga0126312_103292581	3300010041	Serpentine Soil	RMILSILVTLAFVATLLFMLVRAFTGPIRHRHSRPVH*
Ga0126310_105212171	3300010044	Serpentine Soil	MILSILVTLAFAATLAFMLVRAFTGPVRHRHSRPVH*
Ga0126321_10737581	3300010145	Soil	NGRRRGMILSVFVTLAFVATLLWMLVRAFTGPMRHRHRRPVH*
Ga0126321_10796031	3300010145	Soil	MILSVLVTLAFVATLLWMLVRAFTGPIRHRHRRPAH*
Ga0138513_1000153922	3300011000	Soil	MILSILVTLAFVATLLWMLVRAFTSPIRHWHRRPVHH*
Ga0120192_100028663	3300012021	Terrestrial	MILSVLVTLAFVATLLWMLVRAFTGPIRHRHRRVVH*
Ga0120192_100183403	3300012021	Terrestrial	MVLSILVTLAFVATLLFMVVRAFTGPMRHRHRRRPGHRPP
Ga0137374_104278956	3300012204	Vadose Zone Soil	MILSVLVTLGFVATLLWMLVRAFTGPIRHRHRRMVH*
Ga0162651_1000585071	3300012938	Soil	MILSILVTLAFVATLAFMLVRAFTGPVRSRHGRPVH*
Ga0162651_1000935802	3300012938	Soil	MILSVLVTLAFVAALLWMLVRAITGPMRHQHRRVVH*
Ga0162652_1000105102	3300012941	Soil	MILSILVTLAFVATLLWMLVRAFTSPMRHQHRRVVH*
Ga0162652_1000767572	3300012941	Soil	MILSILVTLAFVALLAFILVRAFTGPVRHRHSRPVH*
Ga0182000_100028623	3300014487	Soil	MILSILVALAFVTTLAFMLVRAFTGPVRPRHSRPVH*
Ga0182000_100379912	3300014487	Soil	MILSILVTLAFVATLAFMLVRAFTGPVRPRRSRPVH*
Ga0190266_101552511	3300017965	Soil	TEGRRRMILSILVTLAFVATLAFMLVRAFTGPVRHRHSRPVH
Ga0190266_111720762	3300017965	Soil	MILSILVTLAFVATLAFMLVRAFTGPVRHRHSRPVH
Ga0184605_101276721	3300018027	Groundwater Sediment	MILSILVTLAFVATLLWMLVRAFTSPMRHQHRRPVH
Ga0184605_105006821	3300018027	Groundwater Sediment	MILSILVTLAFVATLVFMLVRAFTGPVRHRHSRPVH
Ga0184634_100214941	3300018031	Groundwater Sediment	MILSVLVTLAFVATLLWMLVRAFTGPIRHRHRRPVH
Ga0184634_102783602	3300018031	Groundwater Sediment	MILSILVTLVFVALLAFILVRAFTGPVRHRHSRPVH
Ga0184635_100227561	3300018072	Groundwater Sediment	ILSILVTLVFVALLAFILVRAFTGPVRHRHSRPVH
Ga0184609_100010396	3300018076	Groundwater Sediment	MLLSILVTLVFVAMLLFMLVRAFTGPVRHRHSRPVR
Ga0184625_100122652	3300018081	Groundwater Sediment	MILSILVTLAFVATLLWTLVRAFTGPIRHRHRLPVH
Ga0184625_100197314	3300018081	Groundwater Sediment	MILSVLVTLAFVATLLWMLVRAFTGPIRHWHRRPVHH
Ga0190265_100402442	3300018422	Soil	MILSILVTLAFVATLAFMLVRAFTGPVRHRHGRPVH
Ga0190275_130169641	3300018432	Soil	RSRRMILSILVTLAFVATLLFMLVRAFTGPIRHRHSRPVH
Ga0190269_101365092	3300018465	Soil	MILSILVTLAFVALLAFILVRAFTGPVRHRHSRPVH
Ga0190269_108926101	3300018465	Soil	MILSVLVTLAFVAALLWMLVRAFTGPMRHQHRRVVH
Ga0190268_111171232	3300018466	Soil	MILSILVPLAFVATLAFMLVRAFTGPVRHRHGRPVH
Ga0190268_116499642	3300018466	Soil	MILSILVTLAFVATLLFMLVRAFTGPIRHRHSRPVH
Ga0190270_104771562	3300018469	Soil	ERSRRMILSILVTLVFVALLAFILVRAFTGPVRHRHSRPVH
Ga0190270_107940752	3300018469	Soil	MILSILVTLVFVALLAFILVRAFTGPVRHRHSRPVR
Ga0190264_101777402	3300019377	Soil	MILSILVTLAFVATLLFMLVRAFTGPVRHRHGRPVH
Ga0222625_13230241	3300022195	Groundwater Sediment	ERGRRMLLSILVTLVFVALLLFMLVRAFTGPVRHRHSRPVR
Ga0224452_10520911	3300022534	Groundwater Sediment	SRRMILSILVTLVFVALLAFILVRAFTGPVRHRHSRPVH
Ga0222622_102407383	3300022756	Groundwater Sediment	MILSVLVTLAFVATLLWMVVRAFTGPIHHRHRRLVH
Ga0222622_103132831	3300022756	Groundwater Sediment	EPTERSRRMILSILVTLAFVATLAFMLVRAFTGPVRHRHSRPVH
Ga0208347_1003892	3300026667	Soil	MILSILVTLAFVATLLFMLVRAFTGPVRHRHSRPVH
Ga0208710_1042092	3300026790	Soil	MVLSILVTLAFVATLAFMLVRAFTGPVRHRHGRPVH
Ga0209887_10061673	3300027561	Groundwater Sand	MILSVLVTLAFVTTLLWMLVRAFTGPIRHRHRRPVH
Ga0209874_11394441	3300027577	Groundwater Sand	MILSVLVTLAFVTTLLWMLVRAFTGPIRHRHRRVVH
Ga0209461_100454391	3300027750	Agave	NRMSNGRRRRMILSILVTLAFVATLAFMLVRAFTGPVRPRHGRPVH
Ga0209461_100966131	3300027750	Agave	RGMILSVFVTLAFVATLLWMLVRAFTGPMRHRHRRPVH
Ga0209574_100384242	3300027809	Agave	MILSILVTLAFVTTLAFMLVRAFTGPVRHRHSRPVH
Ga0209814_100054433	3300027873	Populus Rhizosphere	MILSILVTLAFVAALAFMLVRAFTGPVRHRRGRPVH
Ga0247828_102407772	3300028587	Soil	MILSILVTLLFVALLAFILVRAFTGPVRHRHSRPIR
Ga0247818_100493362	3300028589	Soil	MILSILVTLLFVALLAFILVRAFTGPVRRRHSRPIR
Ga0247823_101031622	3300028590	Soil	MILSILVTLVFVALLAFILVRAFTGPVRHRHSRPIR
Ga0247822_100636953	3300028592	Soil	MILSILVTLVFVALLAFILVRAFTGPVRRRHSRPIR
Ga0307276_100190471	3300028705	Soil	TNGRSRRMILSILVTLAFVATLVFMLVRAFTGPVRHRHSRPVH
Ga0307298_100409741	3300028717	Soil	TERSRRMILSILVTLAFVATLVFMLVRAFTGPVRHRHSRPVH
Ga0307307_102121322	3300028718	Soil	MILSILVALAFVATLAFMLVRAFTGPVRHRHSRPVH
Ga0307301_100009031	3300028719	Soil	MILSILVTLAFVASLLWMLVRAFTGPIRHRHRLPVH
Ga0307317_100504761	3300028720	Soil	HEPTERSGRMILSILVTLAFVATLVFMLVRAFTGPVRRRHSRPVH
Ga0307319_100030561	3300028722	Soil	MILSVLVTLAFVATLLWMVVRAFTGPIHHRHRRPVH
Ga0307319_101309531	3300028722	Soil	MILSILVTLAFVATLAFMLVRAFTGPVRNRHSRPVH
Ga0307319_102996521	3300028722	Soil	TTEGRRGMILSVLVTLAFVATLLWMLVRAFTGPIRHWHRRPVHH
Ga0307318_101931881	3300028744	Soil	MILSILVTLAFVATLAFMLVRAFTGPVRPRHGRPVH
Ga0307320_100768872	3300028771	Soil	MILSILVTLVFVALLAFILVRAFTGPVRHRHSRPIH
Ga0307288_101434792	3300028778	Soil	MILSILVTLAFVATLVFMLVRAFTGPVRRRHSRPVH
Ga0307278_100109991	3300028878	Soil	RSRRMILSILVTLAFVATLAFMLVRAFTGPVRHRHSRPVH
Ga0307278_100117502	3300028878	Soil	MILSILVTLAFAATLAFMLVRAFTGPVRHRHSRPIH
Ga0307277_100039061	3300028881	Soil	ERGMILSILVTLAFVASLLWMLVRAFTGPVRHRHRLPVH
Ga0268240_100127982	3300030496	Soil	MILSILVTLAFVATLAFMLVRAFTGPVRSRRSRPVH
Ga0268243_10035823	3300030510	Soil	MILSILVALAFVTTLAFMLVRAFTGPVRPRHSRPVH
Ga0268253_103498522	3300030514	Agave	MILSILVTLAFVATLAFMLVRAFTGPVRPRRSRPVH
Ga0102752_10060152	3300030783	Soil	NRRETEMILSILVTLAFVATLAFMLVRAFTGPVRHRHGRPVH
Ga0308203_10354211	3300030829	Soil	GRERGMILSILVTLAFVASLLWMLVRAFTGPIRHRHRLPVH
Ga0308203_10458281	3300030829	Soil	EGRRGMILSVLVTLAFVATLLWMVVRAFTGPIHHRHRRLVH
Ga0308205_10245711	3300030830	Soil	RGMILSILVTLAFVASLLWMLVRAFTGPIRHRHRLPVH
Ga0308205_10275692	3300030830	Soil	EGRRGMILSVLVTLAFVATLLWMLVRAFTGPIRHRHRRPVYH
Ga0308205_10372171	3300030830	Soil	QRRRGMILSVLVTLAFVAALLWMLVRAFTGPMRHQHRRVVH
Ga0308202_10380662	3300030902	Soil	RGMILSVLVTLAFVATLLWMLVRAFTGPIRHRRPVHH
Ga0308206_10695651	3300030903	Soil	ILSILVTLAFVATLLWMLVRAFTSPMRHQHRRPVH
Ga0308206_11513691	3300030903	Soil	GRRGMILSVLVTLAFVATLLWMLVRAFTGPIRHRHRRPVH
Ga0308206_12007021	3300030903	Soil	GRERGMILTILVTLAFVATLLWMLVRAFTGPIRHRHRLPVHH
Ga0102760_110038391	3300031039	Soil	PNRRETEMILSILVTLAFVATLAFMLVRAFTGPVRHRHGRPVH
Ga0308189_101917281	3300031058	Soil	GRERGMILSILVTLAFVASLLWMLVRAFTGPVRHRHRLPVH
Ga0308201_102759742	3300031091	Soil	EGRRGMILSVLVTLAFVATLLWMLVRAFTSPIRHRHRRPVH
Ga0308201_103330831	3300031091	Soil	ERGMILSILVTLAFVATLLWMLVRAFTGPIRHRHHLPVH
Ga0308186_10190181	3300031422	Soil	ERGMILSILVTLAFVASLLWMLVRAFTGPIRHRHRLPVH
Ga0307408_1000917862	3300031548	Rhizosphere	MILSILVTLLFVATLAFMLVRAFTGPIRHRHGRPVH
Ga0307408_1003329232	3300031548	Rhizosphere	MVLSILVTLAFVATLLFMVVRAFTGPLRHRHRRRLVH
Ga0307408_1010371762	3300031548	Rhizosphere	MILSILVALAFVATLAFMLVRAFTGPARPRHSRPVH
Ga0307407_110311792	3300031903	Rhizosphere	MILSILVALAFVATLAFMLVRAFTGPARHRHSRPVH
Ga0307409_1003523831	3300031995	Rhizosphere	MILSILVALAFVATLLFMLVRAFTGPVRPRHSRPVH
Ga0307409_1009675551	3300031995	Rhizosphere	WRHEPTEGRRRMILSILVTLAFVATLAFMLVRAFTGPVRHRHGRPVH
Ga0307409_1013854582	3300031995	Rhizosphere	MILSILVALAFVATLAFMLVRAFTGPVRPRHSRPVH
Ga0307409_1025204681	3300031995	Rhizosphere	RHEPTERSRRMILSILVALAFVATLAFMLVRAFTGPARPRHSRPVH
Ga0307416_1021238682	3300032002	Rhizosphere	PTGRRRRMILSILVTLAFVATLAFMLVRAFTGPVRHRHGRPVH
Ga0307416_1026847021	3300032002	Rhizosphere	ILSILVTLAFVATLAFMLVRAFTGPVRHRHGRPVH
Ga0268251_100557701	3300032159	Agave	MILSVFVTLAFVATLLWMLVRAFTGPMRHRHRRPVH
Ga0268251_103158172	3300032159	Agave	MILSILVTLAFVATLAFMLVRAFTGPVVRHRHGRPVH

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F053869

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences