Metagenome Family F053854

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F053854
Family Type	Metagenome
Number of Sequences	140
Average Sequence Length	46 residues
Representative Sequence	MPKHQLLRQVKAKSLSVKIPKNEPNTARLSWVLANEEFLTVEIPRYA
Number of Associated Samples	91
Number of Associated Scaffolds	140

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	98.57 %
% of genes near scaffold ends (potentially truncated)	99.29 %
% of genes from short scaffolds (< 2000 bps)	91.43 %
Associated GOLD sequencing projects	85
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (66.429 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (40.000 % of family members)
Environment Ontology (ENVO)	Unclassified (58.571 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (50.714 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 29.79% β-sheet: 8.51% Coil/Unstructured: 61.70%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 140 Family Scaffolds
PF08281	Sigma70_r4_2	32.86
PF04392	ABC_sub_bind	3.57
PF02308	MgtC	2.14
PF01527	HTH_Tnp_1	2.14
PF04542	Sigma70_r2	2.14
PF00072	Response_reg	1.43
PF07237	DUF1428	1.43
PF04519	Bactofilin	1.43
PF13586	DDE_Tnp_1_2	0.71
PF05199	GMC_oxred_C	0.71
PF13384	HTH_23	0.71
PF13333	rve_2	0.71

COG ID	Name	Functional Category	% Frequency in 140 Family Scaffolds
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	3.57
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	2.14
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	2.14
COG1285	Magnesium uptake protein YhiD/SapB, involved in acid resistance	Inorganic ion transport and metabolism [P]	2.14
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	2.14
COG3174	Membrane component of predicted Mg2+ transport system, contains DUF4010 domain	Inorganic ion transport and metabolism [P]	2.14
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	2.14
COG1664	Cytoskeletal protein CcmA, bactofilin family	Cytoskeleton [Z]	1.43
COG5507	Uncharacterized conserved protein YbaA, DUF1428 family	Function unknown [S]	1.43
COG2303	Choline dehydrogenase or related flavoprotein	Lipid transport and metabolism [I]	0.71

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	66.43 %
Unclassified	root	N/A	33.57 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	66.43 %
Unclassified	root	N/A	33.57 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	66.43 %
Unclassified	root	N/A	33.57 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	53.57 %
Unclassified	root	N/A	33.57 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.43 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.57 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	21.43 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	1.43 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.57 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	11.43 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	5.71 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.43 %
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	0.71 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.57 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	5.71 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	5.00 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.43 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.71 %
Methylocystaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae	0.71 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.57 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	5.71 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3.57 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.43 %
Methylocystis	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis	0.71 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.71 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.57 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	5.71 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	1.43 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.43 %
Bradyrhizobium diazoefficiens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens	0.71 %
Bradyrhizobium lablabi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	0.71 %
Methylocystis	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis	0.71 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.71 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.57 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	5.71 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.43 %
Bradyrhizobium sp. CCGUVB23	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. CCGUVB23	0.71 %
Bradyrhizobium sp. dw_411	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. dw_411	0.71 %
Bradyrhizobium diazoefficiens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens	0.71 %
Bradyrhizobium lablabi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	0.71 %
Methylocystis	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis	0.71 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.71 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.71 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459024\|GZRSKLJ02FYLK7	Not Available	514	Open in IMG/M
3300000655\|AF_2010_repII_A100DRAFT_1042324	Not Available	823	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10085672	All Organisms → cellular organisms → Bacteria → Proteobacteria	670	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10111693	All Organisms → cellular organisms → Bacteria → Proteobacteria	573	Open in IMG/M
3300000837\|AP72_2010_repI_A100DRAFT_1033512	All Organisms → cellular organisms → Bacteria → Proteobacteria	721	Open in IMG/M
3300000837\|AP72_2010_repI_A100DRAFT_1035200	All Organisms → cellular organisms → Bacteria → Proteobacteria	703	Open in IMG/M
3300000893\|AP72_2010_repI_A001DRAFT_1064392	All Organisms → cellular organisms → Bacteria	577	Open in IMG/M
3300000953\|JGI11615J12901_11414746	All Organisms → cellular organisms → Bacteria	537	Open in IMG/M
3300005186\|Ga0066676_10238569	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis	1183	Open in IMG/M
3300005332\|Ga0066388_101610043	All Organisms → cellular organisms → Bacteria	1143	Open in IMG/M
3300005332\|Ga0066388_104558652	All Organisms → cellular organisms → Bacteria → Proteobacteria	705	Open in IMG/M
3300005445\|Ga0070708_101272133	All Organisms → cellular organisms → Bacteria	687	Open in IMG/M
3300005518\|Ga0070699_101980756	Not Available	532	Open in IMG/M
3300005536\|Ga0070697_101093445	All Organisms → cellular organisms → Bacteria → Proteobacteria	710	Open in IMG/M
3300005559\|Ga0066700_10086385	All Organisms → cellular organisms → Bacteria → Proteobacteria	2025	Open in IMG/M
3300005559\|Ga0066700_10572966	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	788	Open in IMG/M
3300005713\|Ga0066905_102274703	Not Available	506	Open in IMG/M
3300005937\|Ga0081455_10541171	All Organisms → cellular organisms → Bacteria → Proteobacteria	772	Open in IMG/M
3300006050\|Ga0075028_100893307	Not Available	547	Open in IMG/M
3300006854\|Ga0075425_102263609	Not Available	605	Open in IMG/M
3300006854\|Ga0075425_102311163	Not Available	597	Open in IMG/M
3300007076\|Ga0075435_101400787	Not Available	613	Open in IMG/M
3300009147\|Ga0114129_12788603	All Organisms → cellular organisms → Bacteria	581	Open in IMG/M
3300009792\|Ga0126374_10673664	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	774	Open in IMG/M
3300010046\|Ga0126384_11180650	Not Available	705	Open in IMG/M
3300010046\|Ga0126384_11653768	All Organisms → cellular organisms → Bacteria → Proteobacteria	604	Open in IMG/M
3300010047\|Ga0126382_10174677	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1501	Open in IMG/M
3300010047\|Ga0126382_10669694	Not Available	865	Open in IMG/M
3300010048\|Ga0126373_10772489	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1022	Open in IMG/M
3300010358\|Ga0126370_10460406	All Organisms → cellular organisms → Bacteria → Proteobacteria	1063	Open in IMG/M
3300010359\|Ga0126376_11531522	Not Available	697	Open in IMG/M
3300010359\|Ga0126376_13181306	All Organisms → cellular organisms → Bacteria	508	Open in IMG/M
3300010361\|Ga0126378_10659453	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1159	Open in IMG/M
3300010361\|Ga0126378_10807943	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1047	Open in IMG/M
3300010361\|Ga0126378_11916939	Not Available	675	Open in IMG/M
3300010361\|Ga0126378_12278168	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens	618	Open in IMG/M
3300010361\|Ga0126378_13200760	Not Available	521	Open in IMG/M
3300010362\|Ga0126377_10234710	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1777	Open in IMG/M
3300010362\|Ga0126377_11353528	All Organisms → cellular organisms → Bacteria → Proteobacteria	784	Open in IMG/M
3300010362\|Ga0126377_12664211	All Organisms → cellular organisms → Bacteria → Proteobacteria	575	Open in IMG/M
3300010366\|Ga0126379_10741359	All Organisms → cellular organisms → Bacteria → Proteobacteria	1078	Open in IMG/M
3300010366\|Ga0126379_11344933	Not Available	820	Open in IMG/M
3300010376\|Ga0126381_100251284	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2396	Open in IMG/M
3300010376\|Ga0126381_104929444	Not Available	512	Open in IMG/M
3300012208\|Ga0137376_11626589	Not Available	537	Open in IMG/M
3300012356\|Ga0137371_10749062	Not Available	746	Open in IMG/M
3300012360\|Ga0137375_10857358	Not Available	725	Open in IMG/M
3300012582\|Ga0137358_10352237	All Organisms → cellular organisms → Bacteria → Proteobacteria	997	Open in IMG/M
3300012971\|Ga0126369_10962445	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	940	Open in IMG/M
3300012971\|Ga0126369_12830053	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. CCGUVB23	568	Open in IMG/M
3300015374\|Ga0132255_106210898	Not Available	506	Open in IMG/M
3300016270\|Ga0182036_10134848	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1736	Open in IMG/M
3300016294\|Ga0182041_10119330	All Organisms → cellular organisms → Bacteria → Proteobacteria	1977	Open in IMG/M
3300016294\|Ga0182041_11075715	All Organisms → cellular organisms → Bacteria → Proteobacteria	730	Open in IMG/M
3300016319\|Ga0182033_11518463	Not Available	605	Open in IMG/M
3300016319\|Ga0182033_12064306	Not Available	520	Open in IMG/M
3300016341\|Ga0182035_11274467	All Organisms → cellular organisms → Bacteria → Proteobacteria	658	Open in IMG/M
3300016341\|Ga0182035_12034871	Not Available	522	Open in IMG/M
3300016387\|Ga0182040_10673926	Not Available	843	Open in IMG/M
3300016387\|Ga0182040_11495596	All Organisms → cellular organisms → Bacteria → Proteobacteria	573	Open in IMG/M
3300016404\|Ga0182037_11899008	All Organisms → cellular organisms → Bacteria	533	Open in IMG/M
3300018433\|Ga0066667_10363588	All Organisms → cellular organisms → Bacteria → Proteobacteria	1156	Open in IMG/M
3300021168\|Ga0210406_11085262	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	590	Open in IMG/M
3300021405\|Ga0210387_11301527	All Organisms → cellular organisms → Bacteria	628	Open in IMG/M
3300021476\|Ga0187846_10172324	All Organisms → cellular organisms → Bacteria	911	Open in IMG/M
3300021560\|Ga0126371_10849897	All Organisms → cellular organisms → Bacteria → Proteobacteria	1058	Open in IMG/M
3300021560\|Ga0126371_11247385	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	878	Open in IMG/M
3300021560\|Ga0126371_11813256	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	731	Open in IMG/M
3300031544\|Ga0318534_10070389	All Organisms → cellular organisms → Bacteria → Proteobacteria	1979	Open in IMG/M
3300031549\|Ga0318571_10399279	Not Available	536	Open in IMG/M
3300031561\|Ga0318528_10361693	All Organisms → cellular organisms → Bacteria → Proteobacteria	779	Open in IMG/M
3300031573\|Ga0310915_10479025	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	884	Open in IMG/M
3300031573\|Ga0310915_10527573	Not Available	838	Open in IMG/M
3300031573\|Ga0310915_10715542	All Organisms → cellular organisms → Bacteria → Proteobacteria	706	Open in IMG/M
3300031640\|Ga0318555_10047337	All Organisms → cellular organisms → Bacteria → Proteobacteria	2169	Open in IMG/M
3300031682\|Ga0318560_10039953	All Organisms → cellular organisms → Bacteria → Proteobacteria	2268	Open in IMG/M
3300031719\|Ga0306917_10075088	All Organisms → cellular organisms → Bacteria → Proteobacteria	2356	Open in IMG/M
3300031724\|Ga0318500_10314972	Not Available	768	Open in IMG/M
3300031744\|Ga0306918_10148982	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1725	Open in IMG/M
3300031744\|Ga0306918_10289395	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1259	Open in IMG/M
3300031747\|Ga0318502_10128502	All Organisms → cellular organisms → Bacteria → Proteobacteria	1429	Open in IMG/M
3300031748\|Ga0318492_10497675	Not Available	646	Open in IMG/M
3300031770\|Ga0318521_10399753	Not Available	819	Open in IMG/M
3300031770\|Ga0318521_10605545	Not Available	662	Open in IMG/M
3300031771\|Ga0318546_10516324	All Organisms → cellular organisms → Bacteria → Proteobacteria	839	Open in IMG/M
3300031771\|Ga0318546_10957228	All Organisms → cellular organisms → Bacteria	602	Open in IMG/M
3300031771\|Ga0318546_11297378	Not Available	511	Open in IMG/M
3300031777\|Ga0318543_10068912	All Organisms → cellular organisms → Bacteria → Proteobacteria	1478	Open in IMG/M
3300031777\|Ga0318543_10504186	Not Available	542	Open in IMG/M
3300031780\|Ga0318508_1004993	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2738	Open in IMG/M
3300031795\|Ga0318557_10104550	All Organisms → cellular organisms → Bacteria → Proteobacteria	1255	Open in IMG/M
3300031795\|Ga0318557_10436216	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	602	Open in IMG/M
3300031796\|Ga0318576_10191472	All Organisms → cellular organisms → Bacteria → Proteobacteria	961	Open in IMG/M
3300031796\|Ga0318576_10307974	Not Available	748	Open in IMG/M
3300031833\|Ga0310917_10078091	All Organisms → cellular organisms → Bacteria → Proteobacteria	2091	Open in IMG/M
3300031833\|Ga0310917_10116332	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1736	Open in IMG/M
3300031833\|Ga0310917_10519021	Not Available	810	Open in IMG/M
3300031845\|Ga0318511_10002298	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5344	Open in IMG/M
3300031846\|Ga0318512_10517071	Not Available	606	Open in IMG/M
3300031859\|Ga0318527_10266612	Not Available	728	Open in IMG/M
3300031860\|Ga0318495_10136984	All Organisms → cellular organisms → Bacteria → Proteobacteria	1103	Open in IMG/M
3300031879\|Ga0306919_10510591	All Organisms → cellular organisms → Bacteria → Proteobacteria	926	Open in IMG/M
3300031879\|Ga0306919_11137028	All Organisms → cellular organisms → Bacteria	594	Open in IMG/M
3300031890\|Ga0306925_10987540	All Organisms → cellular organisms → Bacteria	859	Open in IMG/M
3300031897\|Ga0318520_10119687	All Organisms → cellular organisms → Bacteria → Proteobacteria	1498	Open in IMG/M
3300031910\|Ga0306923_10852978	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. dw_411	1001	Open in IMG/M
3300031910\|Ga0306923_11014697	All Organisms → cellular organisms → Bacteria → Proteobacteria	900	Open in IMG/M
3300031910\|Ga0306923_11573457	Not Available	684	Open in IMG/M
3300031910\|Ga0306923_11967348	All Organisms → cellular organisms → Bacteria → Proteobacteria	594	Open in IMG/M
3300031912\|Ga0306921_10357769	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1706	Open in IMG/M
3300031941\|Ga0310912_10528180	Not Available	919	Open in IMG/M
3300031941\|Ga0310912_10633333	Not Available	831	Open in IMG/M
3300031941\|Ga0310912_11271609	All Organisms → cellular organisms → Bacteria → Proteobacteria	558	Open in IMG/M
3300031942\|Ga0310916_10030305	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3963	Open in IMG/M
3300031945\|Ga0310913_10116846	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1818	Open in IMG/M
3300031945\|Ga0310913_11269289	Not Available	511	Open in IMG/M
3300031947\|Ga0310909_10616953	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	905	Open in IMG/M
3300031954\|Ga0306926_10462034	Not Available	1563	Open in IMG/M
3300031954\|Ga0306926_11569519	All Organisms → cellular organisms → Bacteria → Proteobacteria	756	Open in IMG/M
3300032001\|Ga0306922_10367055	Not Available	1543	Open in IMG/M
3300032001\|Ga0306922_10651092	All Organisms → cellular organisms → Bacteria → Proteobacteria	1112	Open in IMG/M
3300032025\|Ga0318507_10005804	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3750	Open in IMG/M
3300032041\|Ga0318549_10005117	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4213	Open in IMG/M
3300032042\|Ga0318545_10187397	All Organisms → cellular organisms → Bacteria	739	Open in IMG/M
3300032051\|Ga0318532_10027398	Not Available	1881	Open in IMG/M
3300032052\|Ga0318506_10231428	All Organisms → cellular organisms → Bacteria → Proteobacteria	817	Open in IMG/M
3300032059\|Ga0318533_10127656	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	1784	Open in IMG/M
3300032059\|Ga0318533_10505850	All Organisms → cellular organisms → Bacteria → Proteobacteria	885	Open in IMG/M
3300032059\|Ga0318533_11103314	Not Available	581	Open in IMG/M
3300032059\|Ga0318533_11426922	Not Available	505	Open in IMG/M
3300032060\|Ga0318505_10377296	All Organisms → cellular organisms → Bacteria → Proteobacteria	670	Open in IMG/M
3300032065\|Ga0318513_10325352	All Organisms → cellular organisms → Bacteria → Proteobacteria	747	Open in IMG/M
3300032068\|Ga0318553_10297328	Not Available	844	Open in IMG/M
3300032076\|Ga0306924_11085071	Not Available	873	Open in IMG/M
3300032076\|Ga0306924_12466760	All Organisms → cellular organisms → Bacteria	522	Open in IMG/M
3300032261\|Ga0306920_100904187	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1290	Open in IMG/M
3300033289\|Ga0310914_10130751	All Organisms → cellular organisms → Bacteria → Proteobacteria	2195	Open in IMG/M
3300033289\|Ga0310914_10246415	Not Available	1604	Open in IMG/M
3300033289\|Ga0310914_11161719	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	673	Open in IMG/M
3300033290\|Ga0318519_10850349	All Organisms → cellular organisms → Bacteria	562	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.71%
Host-Associated	Host-Associated	4.29%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	95.00%
Plants	Host-Associated → Plants	4.29%
Aquatic	Environmental → Aquatic	0.71%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	94.29%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.86%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.43%
Sediment	Environmental → Aquatic → Sediment	0.71%
Cave	Environmental → Terrestrial → Cave	0.71%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	90.00%
Loam	Environmental → Terrestrial → Soil → Loam	4.29%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.86%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.71%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.71%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.71%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.71%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	64.29%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	22.14%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.57%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.86%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.14%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.14%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.71%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.71%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.71%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.71%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	40.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	20.00%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	18.57%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	4.29%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.86%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.86%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.14%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.14%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.71%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.71%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.71%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	0.71%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.71%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.71%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459024	Grass soil microbial communities from Rothamsted Park, UK - FD1 (NaCl 300g/L 5ml)	Environmental	Open in IMG/M
3300000655	Forest soil microbial communities from Amazon forest - 2010 replicate II A100	Environmental	Open in IMG/M
3300000793	Forest soil microbial communities from Amazon forest - 2010 replicate II A001	Environmental	Open in IMG/M
3300000837	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A100	Environmental	Open in IMG/M
3300000893	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A001	Environmental	Open in IMG/M
3300000953	Soil microbial communities from Great Prairies - Kansas Corn soil	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021476	Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2)	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031780	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FD1_04710370	2170459024	Grass Soil	MPAHELLRQVKAKSLSVKISRNDPNSARVNWQLADGEFLTVEIPRYVLERFMVQAKRSN
AF_2010_repII_A100DRAFT_10423241	3300000655	Forest Soil	MPTHQLLRQVKAKSLSVRIPTNEPTTARLNCVLANGEFLTVEIPRYVLE
AF_2010_repII_A001DRAFT_100856721	3300000793	Forest Soil	MPKHQVLRQVKAKSLSVKIPKNAPDTARLSWVLANEEFLTVEIPRYALERFMVQA
AF_2010_repII_A001DRAFT_101116931	3300000793	Forest Soil	MPKHPLLRQVKAKSLSVKIPKNEPNTARLSWVLAN
AP72_2010_repI_A100DRAFT_10335122	3300000837	Forest Soil	MPKHQLLRHAKAKSLSVKIPKNEPNTARLSWVLANEEFLTLEIP
AP72_2010_repI_A100DRAFT_10352001	3300000837	Forest Soil	MPKHPLLRQVKAKSLSVKIPKNEPNTARLSWVLANEEFL
AP72_2010_repI_A001DRAFT_10643922	3300000893	Forest Soil	MPKHQLLRHVKAKSLSVKIPKNEPNTARLSWVLANEEFLTVEIPRYALERFMVQAKR
JGI11615J12901_114147461	3300000953	Soil	MPKHQPLRQVKAKSLSVKIPKNEPNTARLSWVLANEEFLTVEIPRYALER
Ga0066676_102385691	3300005186	Soil	VKAKSLSVKISKNDLNTARVNWQLADGEFLTVEIPRYVLERF
Ga0066388_1016100431	3300005332	Tropical Forest Soil	MPKHQLLRQVKAKSLSVKIPKNEPNTARLSWVLANEEFLT
Ga0066388_1045586522	3300005332	Tropical Forest Soil	MPKHPLLRQVKAKSLSVKIPKNEPNTARLSWVLANEEFLTVEIP
Ga0070708_1012721331	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MPKHQLLRQVKAKSLSVKIPKNEPNTARLSWVLANEEFLTVEIPRYALERFM
Ga0070699_1019807562	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MPAHELLRQVKAKSLSVKISKNDPNTARVNWQLADGEFLTVEIPR
Ga0070697_1010934452	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MPKHLLLRQVKAKSLTVKIPKNEPNTARLSWVLANEEFLTVEIPRYALERFMVQAKRA
Ga0066700_100863854	3300005559	Soil	MPKHQQLRRVKAKSLSVKIPKNEPNTARLSWVLANEEFLTVEIPRYALER
Ga0066700_105729662	3300005559	Soil	VKAKSLSVKISKNDLNTARVNWQLADGEFLTVEIPRYVLERFMVQAKR
Ga0066905_1022747031	3300005713	Tropical Forest Soil	MPAHELLRQVKAKSLSVKIPKNEPNTARLSWVLANEEFLTVEIP
Ga0081455_105411712	3300005937	Tabebuia Heterophylla Rhizosphere	MPKHQLLRQVKAKSLTVKIPKNEPNTARLSLLANEEFLTVEIPRYALER
Ga0075028_1008933073	3300006050	Watersheds	MPAHELLRQVKAKSLSVKIPKNEPNTARLSWVLANEEFL
Ga0075425_1022636092	3300006854	Populus Rhizosphere	MPKHQLLRQVKAKSLTVKIPKNEPNTARLSWVLANEEFLTVEIP
Ga0075425_1023111631	3300006854	Populus Rhizosphere	MPTHQLLRQVKAKSLSVKIPKNEPTTARLNCVLANEEFLTL
Ga0075435_1014007872	3300007076	Populus Rhizosphere	MPTHQLLRQVKAKSLSVKIPKNEPTTARLNCVLANEEFLTLEIPRYVLERFMVRP
Ga0114129_127886031	3300009147	Populus Rhizosphere	MPKHQLLRQVKAKSLSVKIPKNEPNTARLSWVLANEEFLTVEIPRHALERFMVQ
Ga0126374_106736641	3300009792	Tropical Forest Soil	MPKHQLLRQVKAKSLSVKIPKNEPNTARLSWVLANEEFLTVEIPRYA
Ga0126384_111806502	3300010046	Tropical Forest Soil	MPAHELLRQVKAKSLSVKIPKNEPNTARLSWVLANE
Ga0126384_116537681	3300010046	Tropical Forest Soil	MPKHQLLRHVKAKSLSVKIPKNEPNTARLSWVLANEE
Ga0126382_101746771	3300010047	Tropical Forest Soil	MPAHELLRQVKAKSLSVKISRNDPNTARVNWQLAD
Ga0126382_106696941	3300010047	Tropical Forest Soil	MPTHQLLRQVKAKSLSVKISKNDPNTARVNWQLADGEFLTVEIPRY
Ga0126373_107724893	3300010048	Tropical Forest Soil	MPKHQVLRQVKAKSLSVKIPKNEPNTARLSWVLANEEFLTVE
Ga0126370_104604062	3300010358	Tropical Forest Soil	MPKHQLLRHVKAKSLSVKIPKNEPNTARLSWVLANEEF
Ga0126376_115315222	3300010359	Tropical Forest Soil	MPAHELLRQVKVKSLSVKISRNDPNTARVNWQLADGEFLT
Ga0126376_131813062	3300010359	Tropical Forest Soil	MPEHQLLRHVKAKSLSVKITKSEPNTARLRWVLANEEFL
Ga0126378_106594531	3300010361	Tropical Forest Soil	MPAHELLRQVKAKSLSVKIPKNEPNTARLSWVLANEEF
Ga0126378_108079433	3300010361	Tropical Forest Soil	MPAHELLRQVKAKSLSVKISRNDPNSARVNWQLADGEFLTVEIPRYVLERFMVQAKR
Ga0126378_119169392	3300010361	Tropical Forest Soil	MPAHELLRQVKAKSLSLKISRNDPNSARVNWQLADGEFLTVEIPRYVLERFMVQAKR
Ga0126378_122781681	3300010361	Tropical Forest Soil	MQRQVKAKSLSVKIPKNEPTTVRLNCVLANEEFLTLEIPRYALERFMVQAKRA
Ga0126378_132007602	3300010361	Tropical Forest Soil	MRRQVKAKSLSVKISKNEPTTVRLNCVLANEEFLTLEIPRYALERFMVQAKRA
Ga0126377_102347105	3300010362	Tropical Forest Soil	MPKYQLLRQVKAKSLTVKIPKNEPNTARLSWLLAN
Ga0126377_113535282	3300010362	Tropical Forest Soil	MPKHQVLRHVKAKSLSVKIPKNAPDTARLSWVLANEEFLTVEIPRYALERFMV
Ga0126377_126642112	3300010362	Tropical Forest Soil	MPKHPLLRQVKAKSLSVKIPKNEPNTARLSWVLANEEFLTV
Ga0126379_107413593	3300010366	Tropical Forest Soil	MPKYQLLRQVKAKSLTVKIPKNEPNTARLSWLLANDEFLT
Ga0126379_113449333	3300010366	Tropical Forest Soil	MPKHQLLRQVKAKSLTVKIPKNEPNTARLSWALANEEFLTVEIPRYALE
Ga0126381_1002512843	3300010376	Tropical Forest Soil	MPKYQLSRQVKAKSLSVKIPKNEPNTARLSWVLANEELLTVEIP
Ga0126381_1049294441	3300010376	Tropical Forest Soil	MPKHQLLRQARAKSLSVKIPKNEPNTARLSWALANDEFLTVEIPRYALER
Ga0137376_116265891	3300012208	Vadose Zone Soil	MPAHELLRQVKAKSLSVKISRNDPNSARVNWQLADGEFLTVEIPRYV
Ga0137371_107490621	3300012356	Vadose Zone Soil	MPAHELLRQVKAKSLSVKISKNDPNTARVNWQLADGEFLTVEIPRYVLERF
Ga0137375_108573581	3300012360	Vadose Zone Soil	MPAHELLRQVKAKSLSVKISKNDPNTARVNWQLADGEFLTVEI
Ga0137358_103522372	3300012582	Vadose Zone Soil	MPKHQLLRQVKAKSLSVKISKNEPNTARLSWVLANEAVLTV
Ga0126369_109624452	3300012971	Tropical Forest Soil	MPAQELLRQVKAKSLSVKISKNDPNTARVNWQLADGEFLTVEIPRYALERFMVQAK
Ga0126369_128300532	3300012971	Tropical Forest Soil	MPKYQLSRQVKAKSLSVKIPKNEPNTARLSWVLANEELLTV
Ga0132255_1062108982	3300015374	Arabidopsis Rhizosphere	MPKHQLLRQVKAKSLTVKIPKNEPNTARLSWLLANEEFLTVEIPRYALERFMVQAK
Ga0182036_101348484	3300016270	Soil	MPKHQPLRQVKAKSLSVKIPKNEPNTARLSWVLANE
Ga0182041_101193303	3300016294	Soil	MPKHQLLRQVKAKSLSVKIPKNEPNTARLSWVLANEEFLTV
Ga0182041_110757151	3300016294	Soil	MPKHQLLRHVKAKSLSVKIPKNEPNTARLSWVLANEEFLTVEIPRYA
Ga0182033_115184631	3300016319	Soil	MPKHQLLRQMKAKSLSVKIPKNEPNTARLSWVLAN
Ga0182033_120643061	3300016319	Soil	MPKYQLLRQVKAKSLTVKIPKNEPNTARLSWLLANEEFLTVEIPRYALERFMVQAK
Ga0182035_112744671	3300016341	Soil	MPKHPLLRQVKAKSLSVKIPKNEPNTARLSWVLANEEFLTVE
Ga0182035_120348711	3300016341	Soil	MPKYQLLRQVKAKSLTVKIPKNEPNTARLSWLLANEEFLTVEIPRYALER
Ga0182040_106739261	3300016387	Soil	MPKHQLLRQMKAKSLSVKIPKNEPNTARLSWVLANEEFLTV
Ga0182040_114955961	3300016387	Soil	MAKHQLLRQVKAKSLSVKIPKNEPNTARLSWALANEEFL
Ga0182037_118990081	3300016404	Soil	MPKHQLLRQVKAKSLSVKIPKNEPNTARLSWVLANEEF
Ga0066667_103635882	3300018433	Grasslands Soil	MPKHQLLRQVKAKSLTVKIPKNEPNTARLSWVLANEEFLTVEIPRYALERFMVQAK
Ga0210406_110852622	3300021168	Soil	MPKHQLLRHVKAKSLSVKIPKNEPNTARLSWVLANEEFLTVEIPRYALERFMVQ
Ga0210387_113015272	3300021405	Soil	MPKHQPLRQVKAKSLSMKIPKNEPNTARLSWVLANEEFLTVEIRRYALER
Ga0187846_101723242	3300021476	Biofilm	MPKHQLLRHVKAKSLSVKISKNEPNTARLSWVLAHEEF
Ga0126371_108498971	3300021560	Tropical Forest Soil	MPKHQLSRQVKAKSLSVKIPKNEPNTARLSWVLAN
Ga0126371_112473852	3300021560	Tropical Forest Soil	MPKHQLLRQVRAKSLSVKIPKNEPNTARLSWALAN
Ga0126371_118132561	3300021560	Tropical Forest Soil	MPKHQLLRHVKAKSLSVKIPKNEPNTARLSWVLAN
Ga0318534_100703893	3300031544	Soil	MPEHQLLRHVKAKSLSVKIPKSEPNTARLRWVLANEEFLTVEIPRYALE
Ga0318571_103992791	3300031549	Soil	MPKYQLLRQVKAKSLTVKIPKNEPNTACLSWLLANEE
Ga0318528_103616931	3300031561	Soil	MPKHQLLRHVKAASLSVKIPKNEPNTARLSWVLANEEFLTVEIPRYA
Ga0310915_104790251	3300031573	Soil	MPKHQLLRQVKAKSLCVKIPKNEPNTARLSWVLANEEFLTVEIPRYAL
Ga0310915_105275731	3300031573	Soil	MPAHELLRQVKAKSLSVKISKNDPNSARVNWQLADGEFLTVEIPRYVLERF
Ga0310915_107155422	3300031573	Soil	MPKHQLLRHVKAASLSVKIPKNEPNTARLSWVLAN
Ga0318555_100473371	3300031640	Soil	MPEHQLLRHVKAKSLSVKIPKSEPNTARLRWVLANEEFLTVEIPRYALERFLVQ
Ga0318560_100399533	3300031682	Soil	MPEHQLLRHVKAKSLSVKIPKSEPNTARLRWVLANEEFLTLEIPRYALE
Ga0306917_100750881	3300031719	Soil	MPKHQLLRQVKAKSLTVKIPKNEPNTARLSWVLANEEFLTV
Ga0318500_103149721	3300031724	Soil	MPKHQLLRQVKAKSLCVKIPKNEPNTARLSWVLANEEFLTIEIPRYALE
Ga0306918_101489821	3300031744	Soil	MPKYQLLRQVKAKSLTVKIPKNEPNTARLSWLLANEEFLTVE
Ga0306918_102893953	3300031744	Soil	MPKHQLLRQVKAKSLTVKIPKNEPNTARLSWVLANEEFLTVE
Ga0318502_101285023	3300031747	Soil	MPKHQLLRHVKAKSLSVKIPKNEPNTARLSWVLANEEFLTVEIPRYALEHF
Ga0318492_104976751	3300031748	Soil	MPTHQLLRQVKAKSLSVKIPKNEPTTARLNCVLANEEFLTLEIPRYVLERFMVQAK
Ga0318521_103997532	3300031770	Soil	MPTHQYLRQVKAKSLNVKIPKNEPTIARLNCVLANEEFLTLEIPRYVLERFMVQ
Ga0318521_106055451	3300031770	Soil	MPTHQLLRQVKAKSLSVKIPKNEPTTARLNCVLANEEFLTLEIPRYVLERFM
Ga0318546_105163242	3300031771	Soil	MPEHQLLRHVKAKSLSVKIPKSEPNTARLRWVLANE
Ga0318546_109572281	3300031771	Soil	MPKHQLLRQVKAKSLSVKIPKNEPNTARLSWVLANE
Ga0318546_112973781	3300031771	Soil	MPTHQYLRQVKAKSLNVKIPKNEPTIARLNCVLANEEFLTLEIPRYVLERFMVQA
Ga0318543_100689121	3300031777	Soil	MPKHQLLFHVKAKSLSVKIPKNEPNTARLSWVLANEEFLTVEIPRYALE
Ga0318543_105041861	3300031777	Soil	MPKHQLLRQVKAKSLCVKIPKNEPNTARLSWVLANEEFLTVEIPRY
Ga0318508_10049931	3300031780	Soil	MPKHQLLRQVKAKSLSVKIPKNEPNTARLSWVLANEELLTVEIPRYALERFMVQAK
Ga0318557_101045501	3300031795	Soil	MPKHQLLRQVKAKSLTVKIPKNEPNTARLSWVLANEEFLTVEIPRYALERFM
Ga0318557_104362162	3300031795	Soil	MPKHQPLRQVKAKSLSVKIPKNEPNTARLSWVLANEEFLTVEIPRYALE
Ga0318576_101914723	3300031796	Soil	MPKHQLLRQVKAKSLTVKIPKNEPNTARLSWVLANEEFLTVEI
Ga0318576_103079742	3300031796	Soil	MPKHQLLRQVKAKSLCVKIPKNEPNTARLSWVLANEEFLTVEIPRYALERFMVQ
Ga0310917_100780911	3300031833	Soil	MPEHQLLRHVKAKSLSVKIPKSEPNTARLRWVLANEEFLTVEIPR
Ga0310917_101163321	3300031833	Soil	MPKHQLLRQVKAKSLTVKIPKNEPNTARLSWVLANEEFLT
Ga0310917_105190212	3300031833	Soil	MPKHQLLRQVKAKSLSVKIPKSEPNTARLSWALANEE
Ga0318511_100022981	3300031845	Soil	MPKYQLLRQVKAKSLTVKIPKNEPNTARLSWLLANEEFLTVEIPRYALERFMVQAKRA
Ga0318512_105170711	3300031846	Soil	MPTHQLLRQVKAKSLSVKIPKNEPTTARTVTIPRC
Ga0318527_102666121	3300031859	Soil	MPKYQLLRQVKAKSLTVKIPKNEPNTARLSWLLANEEFLTVEMPRYA
Ga0318495_101369843	3300031860	Soil	MPKHQLLRQVKAKSLSVKIPKNEPNTARLSWVLANEELLTVEIPRYALERFMVQ
Ga0306919_105105912	3300031879	Soil	MPKHQLLRHVKAKSLSVKIPKNEPNTARLSWVLANEEFLTVEIPRYALERFMVQAK
Ga0306919_111370281	3300031879	Soil	MPKHQLLRQVKAKSLSVKIPKNEPNTARLSWVLANEEFLTVEIPRYALERF
Ga0306925_109875403	3300031890	Soil	MPKHQLLRQVKAKSLCVKIPKNEPNTARLSWVLANEEFLTVEIP
Ga0318520_101196873	3300031897	Soil	MPKHQLLRQVKAKSLTVKIPKNEPNTARLSWVLANE
Ga0306923_108529781	3300031910	Soil	MPKHQLLRQVKAKSLCVKIPKNEPNTARLSWVLANEEFLTVEIPRYALERFMVQAKR
Ga0306923_110146972	3300031910	Soil	MAKHQLLRQVKAKSLSVKIPKNEPNTARLSWALANEEFLTVEI
Ga0306923_115734572	3300031910	Soil	MPKYQLLRQVKAKSLSVKIPKNEPNTARLSWLLANEEFLTVEIPRYALERFMVQAKRA
Ga0306923_119673481	3300031910	Soil	MPKHQLLRQVKAKSLTVKIPKNEPNTARLSWVLANEEFLTVEIPRY
Ga0306921_103577691	3300031912	Soil	MPAHELLRQVKAKSLSVKISRNDPNTARVNWQLADGEFLTVEIPRYVLERFMV
Ga0310912_105281802	3300031941	Soil	MPAHELLRQVKAKSLSVKISKNDPNSARVNWQLADGEFLTVEIPRYVLE
Ga0310912_106333332	3300031941	Soil	MPTHQLLRQVKAKSLSVKIPKTEPTTARLHCVLANGEFL
Ga0310912_112716091	3300031941	Soil	MPKHQLLRHVKAASLSVKIPKNEPNTARLSWVLANEEFLTVEIPRYALERFMVQAK
Ga0310916_100303058	3300031942	Soil	MPKHQLLRQVKAKSLSVKIPKNEPNTARLSWVLANEE
Ga0310913_101168465	3300031945	Soil	MPKHQPLRQVKAKSLSVKIPKNEPNTARLSWVLANEEFLTVEIPRY
Ga0310913_112692891	3300031945	Soil	MPKYQLLRQVKAKSLSVKIPKNEPNTARLSWLLANEEFLTVEIPRYALE
Ga0310909_106169531	3300031947	Soil	MPKHQLLRQVKAKSLCVKIPKNEPNTARLSWVLANEEFLTIEI
Ga0306926_104620341	3300031954	Soil	MPQHQLLRQVKAKSLSVKIPKNEPNTARLSWVLANEE
Ga0306926_115695191	3300031954	Soil	MPKHQLLRHVKAKSLSVKIPKNEPNTARLSWVLANEEFLTVEIPRYALERFMVQA
Ga0306922_103670551	3300032001	Soil	MPKHQLLRQVKAKSLSVKIPKNEPNTARLSWVLANEEFL
Ga0306922_106510921	3300032001	Soil	MPKHQLLFHVKAKSLSVKIPKNEPNTARLSWVLANEEFLTVEIPRYALERFMVQAK
Ga0318507_100058049	3300032025	Soil	MPKYQLLRQVKAKSLTVKIPKNEPNTARLSWLLANEEFLTVEIPRYA
Ga0318549_100051179	3300032041	Soil	MPKHQLLRQVKAKSLSVKIPKNEPNTARLSWVLANEELLTVE
Ga0318545_101873971	3300032042	Soil	MPKHQLLRQVKAKSLSVKIPKNEPNTARLSWVLANEEFLTVEIPRHALERFM
Ga0318532_100273981	3300032051	Soil	MPKHQLLRQVKAKSLCVKIPKNEPNTARLSWVLANEEFLTVEIPRYALE
Ga0318506_102314282	3300032052	Soil	MPKHQLLRQVKAKSLTVKIPKNEPNTARLSWVLANEEFL
Ga0318533_101276564	3300032059	Soil	MPTHQLLRQVKAKSLSVKIPKTEPTTARLHCVLANGEFLTIEVPRYVLERFM
Ga0318533_105058501	3300032059	Soil	VPKHQLLFHVKAKSLSVKIPKNEPNTARLSWVLANEEFLTVE
Ga0318533_111033141	3300032059	Soil	MPAHELLRQVKAKSLSVKISRNNPNTARVNWQLADGEFLTVEIPRYVLERFMVQAKR
Ga0318533_114269222	3300032059	Soil	MPTHQLLRQVKAKSLSVKIPKNEPTTARLNCVLANEE
Ga0318505_103772962	3300032060	Soil	MPKHQLLRHVKAKSLSVKIPKNEPNTARLSWVLANEEFLTVEIPRY
Ga0318513_103253521	3300032065	Soil	MPKHQLLRQVKAKSLSVKIPKNEPNTARLSWVLANEELLTVEIPRYALERFMV
Ga0318553_102973282	3300032068	Soil	MPTHQYLRQVKAKSLNVKIPKNEPTIARLNCVLANEEFLTLEIPRYVLERFMVQAKRA
Ga0306924_110850712	3300032076	Soil	MPKHQLLRQVKAKSLSVKIPKSEPNTARLSWALANEEFLTVEIPRYALERFMVQAKR
Ga0306924_124667601	3300032076	Soil	MPKHQLLRHVKAKSLSVKIPKNEPNTARLSWVLANEEFLTVEIPRYALERF
Ga0306920_1009041871	3300032261	Soil	MPKHQLLRQVKAKSLSVKIPKNEPNTARLSWVLANEEFLTVE
Ga0310914_101307511	3300033289	Soil	MPKHQLLRQVKAKSLSVKIPKNEPNTARLSWVLANEEFLTVEIP
Ga0310914_102464154	3300033289	Soil	MPKYQLLRQVKAKSLTVKIPKNEPNTARLSWLLANEEFL
Ga0310914_111617191	3300033289	Soil	MPKHQPLRQVKAKSLSVKIPKNEPNTARLSWVLANEEFLTVEIPRYALERFMVQ
Ga0318519_108503492	3300033290	Soil	MPKHQLLRHVKAKSLSVKIPKNEPNTARLSWMLANEEFLTVEIPRYALERFMVQA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F053854

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences