Metagenome Family F053726

Basic Information
Family ID	F053726
Family Type	Metagenome
Number of Sequences	140
Average Sequence Length	42 residues
Representative Sequence	QGDIFILNHLVLEHLSGVKGGFPLEEAYYLKLSLFQGVEYFF
Number of Associated Samples	8
Number of Associated Scaffolds	140

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	1.43 %
% of genes near scaffold ends (potentially truncated)	100.00 %
% of genes from short scaffolds (< 2000 bps)	99.29 %
Associated GOLD sequencing projects	8
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Unclassified (95.714 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (94.286 % of family members)
Environment Ontology (ENVO)	Unclassified (99.286 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (96.429 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 54.76% β-sheet: 0.00% Coil/Unstructured: 45.24%
Feature Viewer

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Pfam ID	Name	% Frequency in 140 Family Scaffolds
PF00665	rve	0.71
PF14111	DUF4283	0.71
PF00078	RVT_1	0.71

COG ID	Name	Functional Category	% Frequency in 140 Family Scaffolds
COG2801	Transposase InsO and inactivated derivatives	Mobilome: prophages, transposons [X]	0.71
COG2826	Transposase and inactivated derivatives, IS30 family	Mobilome: prophages, transposons [X]	0.71
COG3316	Transposase (or an inactivated derivative), DDE domain	Mobilome: prophages, transposons [X]	0.71
COG4584	Transposase	Mobilome: prophages, transposons [X]	0.71

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.71 %
All Organisms	root	All Organisms	4.29 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.71 %
cellular organisms	root	All Organisms → cellular organisms	4.29 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.71 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	4.29 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.71 %
Viridiplantae	kingdom	All Organisms → cellular organisms → Eukaryota → Viridiplantae	4.29 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.71 %
Streptophyta	phylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta	4.29 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.71 %
Streptophytina	subphylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina	4.29 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.71 %
Embryophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	4.29 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.71 %
Tracheophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta	2.14 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.71 %
Euphyllophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta	2.14 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.71 %
Spermatophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta	2.14 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.71 %
Acrogymnospermae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Acrogymnospermae	1.43 %
Magnoliopsida	class	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.71 %
Pinopsida	class	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Acrogymnospermae → Pinopsida	1.43 %
Magnoliopsida	class	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.71 %
Pinidae	subclass	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Acrogymnospermae → Pinopsida → Pinidae	1.43 %
Magnoliopsida	class	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.71 %
Conifers I	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Acrogymnospermae → Pinopsida → Pinidae → Conifers I	1.43 %
Magnoliopsida	class	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.71 %
Pinales	order	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Acrogymnospermae → Pinopsida → Pinidae → Conifers I → Pinales	1.43 %
Magnoliopsida	class	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.71 %
Pinaceae	family	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Acrogymnospermae → Pinopsida → Pinidae → Conifers I → Pinales → Pinaceae	1.43 %
Magnoliopsida	class	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.71 %
Picea	genus	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Acrogymnospermae → Pinopsida → Pinidae → Conifers I → Pinales → Pinaceae → Picea	1.43 %
Magnoliopsida	class	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.71 %
Picea glauca	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Acrogymnospermae → Pinopsida → Pinidae → Conifers I → Pinales → Pinaceae → Picea → Picea glauca	0.71 %
Picea sitchensis	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Acrogymnospermae → Pinopsida → Pinidae → Conifers I → Pinales → Pinaceae → Picea → Picea sitchensis	0.71 %
Magnoliopsida	class	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida	0.71 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300009633\|Ga0116129_1150312	Not Available	664	Open in IMG/M
3300022734\|Ga0224571_108007	Not Available	717	Open in IMG/M
3300024123\|Ga0228600_1022069	Not Available	538	Open in IMG/M
3300024225\|Ga0224572_1060649	Not Available	701	Open in IMG/M
3300031708\|Ga0310686_100408084	Not Available	668	Open in IMG/M
3300031708\|Ga0310686_100414865	Not Available	543	Open in IMG/M
3300031708\|Ga0310686_100419572	Not Available	625	Open in IMG/M
3300031708\|Ga0310686_100527489	Not Available	501	Open in IMG/M
3300031708\|Ga0310686_100643940	Not Available	674	Open in IMG/M
3300031708\|Ga0310686_100697098	Not Available	1074	Open in IMG/M
3300031708\|Ga0310686_100701217	Not Available	525	Open in IMG/M
3300031708\|Ga0310686_100709714	Not Available	538	Open in IMG/M
3300031708\|Ga0310686_101005462	Not Available	535	Open in IMG/M
3300031708\|Ga0310686_101144312	Not Available	1182	Open in IMG/M
3300031708\|Ga0310686_101147909	Not Available	548	Open in IMG/M
3300031708\|Ga0310686_101179844	Not Available	1350	Open in IMG/M
3300031708\|Ga0310686_101200734	Not Available	611	Open in IMG/M
3300031708\|Ga0310686_101387179	Not Available	581	Open in IMG/M
3300031708\|Ga0310686_101709894	Not Available	535	Open in IMG/M
3300031708\|Ga0310686_101842676	Not Available	618	Open in IMG/M
3300031708\|Ga0310686_101976137	Not Available	785	Open in IMG/M
3300031708\|Ga0310686_102047700	Not Available	682	Open in IMG/M
3300031708\|Ga0310686_102075070	Not Available	606	Open in IMG/M
3300031708\|Ga0310686_102149914	Not Available	521	Open in IMG/M
3300031708\|Ga0310686_102323776	Not Available	578	Open in IMG/M
3300031708\|Ga0310686_102901018	Not Available	700	Open in IMG/M
3300031708\|Ga0310686_102902915	Not Available	521	Open in IMG/M
3300031708\|Ga0310686_102988419	Not Available	505	Open in IMG/M
3300031708\|Ga0310686_103363666	Not Available	646	Open in IMG/M
3300031708\|Ga0310686_103435251	Not Available	529	Open in IMG/M
3300031708\|Ga0310686_103838025	Not Available	808	Open in IMG/M
3300031708\|Ga0310686_103951399	Not Available	510	Open in IMG/M
3300031708\|Ga0310686_103953629	Not Available	533	Open in IMG/M
3300031708\|Ga0310686_103958682	Not Available	518	Open in IMG/M
3300031708\|Ga0310686_103980526	Not Available	517	Open in IMG/M
3300031708\|Ga0310686_104778423	Not Available	570	Open in IMG/M
3300031708\|Ga0310686_105150450	Not Available	539	Open in IMG/M
3300031708\|Ga0310686_105189561	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	713	Open in IMG/M
3300031708\|Ga0310686_105192376	Not Available	1132	Open in IMG/M
3300031708\|Ga0310686_105195150	Not Available	839	Open in IMG/M
3300031708\|Ga0310686_105265868	Not Available	598	Open in IMG/M
3300031708\|Ga0310686_105435971	Not Available	1165	Open in IMG/M
3300031708\|Ga0310686_105445417	Not Available	504	Open in IMG/M
3300031708\|Ga0310686_105487274	Not Available	626	Open in IMG/M
3300031708\|Ga0310686_105493730	Not Available	883	Open in IMG/M
3300031708\|Ga0310686_105733668	Not Available	596	Open in IMG/M
3300031708\|Ga0310686_105774256	Not Available	705	Open in IMG/M
3300031708\|Ga0310686_105969263	Not Available	796	Open in IMG/M
3300031708\|Ga0310686_105972155	Not Available	632	Open in IMG/M
3300031708\|Ga0310686_106036095	Not Available	956	Open in IMG/M
3300031708\|Ga0310686_106057603	Not Available	546	Open in IMG/M
3300031708\|Ga0310686_106091916	Not Available	568	Open in IMG/M
3300031708\|Ga0310686_106098755	Not Available	738	Open in IMG/M
3300031708\|Ga0310686_106100584	Not Available	520	Open in IMG/M
3300031708\|Ga0310686_106104534	Not Available	893	Open in IMG/M
3300031708\|Ga0310686_106109293	Not Available	542	Open in IMG/M
3300031708\|Ga0310686_106295442	Not Available	682	Open in IMG/M
3300031708\|Ga0310686_106364011	Not Available	530	Open in IMG/M
3300031708\|Ga0310686_106527412	Not Available	545	Open in IMG/M
3300031708\|Ga0310686_106530608	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	571	Open in IMG/M
3300031708\|Ga0310686_106730066	Not Available	597	Open in IMG/M
3300031708\|Ga0310686_106788367	Not Available	574	Open in IMG/M
3300031708\|Ga0310686_106794790	Not Available	1092	Open in IMG/M
3300031708\|Ga0310686_107178051	Not Available	617	Open in IMG/M
3300031708\|Ga0310686_107181410	Not Available	775	Open in IMG/M
3300031708\|Ga0310686_107203621	Not Available	607	Open in IMG/M
3300031708\|Ga0310686_107211060	Not Available	636	Open in IMG/M
3300031708\|Ga0310686_107220642	Not Available	914	Open in IMG/M
3300031708\|Ga0310686_107861756	Not Available	519	Open in IMG/M
3300031708\|Ga0310686_107969428	Not Available	591	Open in IMG/M
3300031708\|Ga0310686_107977223	Not Available	668	Open in IMG/M
3300031708\|Ga0310686_107979205	Not Available	557	Open in IMG/M
3300031708\|Ga0310686_110072853	Not Available	536	Open in IMG/M
3300031708\|Ga0310686_110633173	Not Available	524	Open in IMG/M
3300031708\|Ga0310686_110787941	Not Available	514	Open in IMG/M
3300031708\|Ga0310686_110921655	Not Available	607	Open in IMG/M
3300031708\|Ga0310686_111135918	Not Available	841	Open in IMG/M
3300031708\|Ga0310686_111258370	Not Available	610	Open in IMG/M
3300031708\|Ga0310686_111261139	Not Available	782	Open in IMG/M
3300031708\|Ga0310686_111262823	Not Available	527	Open in IMG/M
3300031708\|Ga0310686_111268564	Not Available	593	Open in IMG/M
3300031708\|Ga0310686_111898849	Not Available	551	Open in IMG/M
3300031708\|Ga0310686_111979812	Not Available	924	Open in IMG/M
3300031708\|Ga0310686_112136525	Not Available	775	Open in IMG/M
3300031708\|Ga0310686_112138426	Not Available	692	Open in IMG/M
3300031708\|Ga0310686_112147540	Not Available	586	Open in IMG/M
3300031708\|Ga0310686_112149093	Not Available	578	Open in IMG/M
3300031708\|Ga0310686_112605834	Not Available	620	Open in IMG/M
3300031708\|Ga0310686_112710198	Not Available	617	Open in IMG/M
3300031708\|Ga0310686_112712294	Not Available	620	Open in IMG/M
3300031708\|Ga0310686_113046854	Not Available	516	Open in IMG/M
3300031708\|Ga0310686_113065904	Not Available	537	Open in IMG/M
3300031708\|Ga0310686_113489373	Not Available	553	Open in IMG/M
3300031708\|Ga0310686_113491929	Not Available	514	Open in IMG/M
3300031708\|Ga0310686_113496961	Not Available	791	Open in IMG/M
3300031708\|Ga0310686_114091172	Not Available	584	Open in IMG/M
3300031708\|Ga0310686_114096628	Not Available	795	Open in IMG/M
3300031708\|Ga0310686_114098774	Not Available	691	Open in IMG/M
3300031708\|Ga0310686_114103039	Not Available	523	Open in IMG/M
3300031708\|Ga0310686_114106327	Not Available	510	Open in IMG/M
3300031708\|Ga0310686_114436439	Not Available	1112	Open in IMG/M
3300031708\|Ga0310686_114697866	Not Available	514	Open in IMG/M
3300031708\|Ga0310686_114972923	Not Available	835	Open in IMG/M
3300031708\|Ga0310686_115161282	Not Available	2009	Open in IMG/M
3300031708\|Ga0310686_115307468	Not Available	588	Open in IMG/M
3300031708\|Ga0310686_115692980	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida	510	Open in IMG/M
3300031708\|Ga0310686_115698851	Not Available	605	Open in IMG/M
3300031708\|Ga0310686_115701038	Not Available	659	Open in IMG/M
3300031708\|Ga0310686_115708190	Not Available	872	Open in IMG/M
3300031708\|Ga0310686_116158544	Not Available	665	Open in IMG/M
3300031708\|Ga0310686_116219284	Not Available	700	Open in IMG/M
3300031708\|Ga0310686_116233359	Not Available	1046	Open in IMG/M
3300031708\|Ga0310686_116323469	Not Available	539	Open in IMG/M
3300031708\|Ga0310686_116476592	Not Available	973	Open in IMG/M
3300031708\|Ga0310686_116580183	Not Available	506	Open in IMG/M
3300031708\|Ga0310686_116599851	Not Available	522	Open in IMG/M
3300031708\|Ga0310686_116602121	Not Available	550	Open in IMG/M
3300031708\|Ga0310686_116696615	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	658	Open in IMG/M
3300031708\|Ga0310686_116818086	Not Available	718	Open in IMG/M
3300031708\|Ga0310686_116821851	Not Available	816	Open in IMG/M
3300031708\|Ga0310686_117456471	Not Available	587	Open in IMG/M
3300031708\|Ga0310686_117458605	Not Available	544	Open in IMG/M
3300031708\|Ga0310686_117459854	Not Available	511	Open in IMG/M
3300031708\|Ga0310686_117657006	Not Available	754	Open in IMG/M
3300031708\|Ga0310686_117714058	Not Available	668	Open in IMG/M
3300031708\|Ga0310686_117737867	Not Available	671	Open in IMG/M
3300031708\|Ga0310686_117740139	Not Available	530	Open in IMG/M
3300031708\|Ga0310686_117742872	Not Available	607	Open in IMG/M
3300031708\|Ga0310686_118235979	Not Available	540	Open in IMG/M
3300031708\|Ga0310686_118536542	Not Available	536	Open in IMG/M
3300031708\|Ga0310686_118700638	Not Available	683	Open in IMG/M
3300031708\|Ga0310686_118838474	Not Available	772	Open in IMG/M
3300031708\|Ga0310686_118841435	Not Available	698	Open in IMG/M
3300031708\|Ga0310686_118844836	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Acrogymnospermae → Pinopsida → Pinidae → Conifers I → Pinales → Pinaceae → Picea → Picea sitchensis	631	Open in IMG/M
3300031708\|Ga0310686_119416050	Not Available	658	Open in IMG/M
3300031708\|Ga0310686_119536795	Not Available	722	Open in IMG/M
3300033545\|Ga0316214_1023038	Not Available	875	Open in IMG/M
3300033547\|Ga0316212_1008872	Not Available	1444	Open in IMG/M
3300033548\|Ga0316216_1003983	Not Available	1065	Open in IMG/M
3300033548\|Ga0316216_1020763	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Acrogymnospermae → Pinopsida → Pinidae → Conifers I → Pinales → Pinaceae → Picea → Picea glauca	546	Open in IMG/M

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.00%
Host-Associated	Host-Associated	5.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	94.29%
Plants	Host-Associated → Plants	5.00%
Aquatic	Environmental → Aquatic	0.71%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	94.29%
Roots	Host-Associated → Plants → Roots	3.57%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.43%
Freshwater	Environmental → Aquatic → Freshwater	0.71%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	94.29%
Unclassified	Host-Associated → Plants → Roots → Unclassified	3.57%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.43%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.71%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	94.29%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	3.57%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.43%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.71%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	94.29%
Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Roots	3.57%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.43%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.71%

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300009633	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_10	Environmental	Open in IMG/M
3300022734	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZU3	Host-Associated	Open in IMG/M
3300024123	Spruce roots microbial communities from Bohemian Forest, Czech Republic - CRU5	Host-Associated	Open in IMG/M
3300024225	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZU5	Host-Associated	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300033545	Spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE4	Host-Associated	Open in IMG/M
3300033547	Spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE1	Host-Associated	Open in IMG/M
3300033548	Spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE6	Host-Associated	Open in IMG/M

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0116129_11503121	3300009633	Peatland	EDIFIWNHLVLEHLCGVKGSFPLEEAYYLKFSLFQGVEYLF*
Ga0224571_1080071	3300022734	Rhizosphere	YIYEGDIFILNHLVLEHLSGVKGGCPLEEAYYLKLSLFQGVEYFS
Ga0228600_10220691	3300024123	Roots	LEHLCGEKGGCPLKEAYYLKLSILQGVEHLFRGFSMLY
Ga0224572_10606491	3300024225	Rhizosphere	QGEIFILNHLVLEHLSGVKGGCPLEEAYYLKLSLFQGVEYFS
Ga0310686_1004080842	3300031708	Soil	IYQGDIFILNHLVLEHLSGVKGGCPLEEAYYLKLSLFQGVEYCS
Ga0310686_1004148651	3300031708	Soil	ILNHLVLEHLSGVKGGCPLEEAYYLKLSLFQGVEYFF
Ga0310686_1004195722	3300031708	Soil	ILNHLVLEHSSGVKGGFPLEEAYYLKLSLFQGAEYFS
Ga0310686_1005274891	3300031708	Soil	YQGDIFILNHLVLEHLSGVKGGCPLEEAYYLKLSLFQGIEYLI
Ga0310686_1006439402	3300031708	Soil	FILNHLVLEHLSGVKGGCPLEEAYYLKLSLFQGLEYFS
Ga0310686_1006970983	3300031708	Soil	VSYIYQGDIFILNHLVLEHLSGVKGGFPLEEDYYLKLSLFQGVEYFF
Ga0310686_1007012171	3300031708	Soil	VSYIYQGDIFILNHLVLEHLSGVKGGCPLEEAYYLKLSLFQGIEYFF
Ga0310686_1007097141	3300031708	Soil	YLLVSYIYQGDIFILNHLVLEHLSGVKGGFPLEEAYYLNFSLFQGVEHLF
Ga0310686_1010054622	3300031708	Soil	SYIYQGDIFILNHLVLEHLSGVKGGSPLEEAYYLKLSLFQGVEYFS
Ga0310686_1011443121	3300031708	Soil	DIFILNHLVLEHLSGVKGGFPLEEAYYLKLSLFQGVEYFS
Ga0310686_1011479091	3300031708	Soil	DIFILNHLVLEHLSGVKGGCPLKEAYYLKLSLFQGIEYFL
Ga0310686_1011798441	3300031708	Soil	QGDIFILNHLVLEHLSGVKGGCPLEEAYYLKLSLFQGVEYFCWGFYMLY
Ga0310686_1012007341	3300031708	Soil	SYIYQGDIFILNHLVLEHLSGVKGGFPLKEAYYLKLSLFQGVEYLF
Ga0310686_1013871791	3300031708	Soil	NHLVLEHLCGVKGGFPLEEAYYLKFSLFQGVEYLF
Ga0310686_1017098941	3300031708	Soil	LYLLVSYIYQGDIFILNHLVLEHLSGVKGGCPLEEAYYLKLSLFQGFEYFS
Ga0310686_1018426762	3300031708	Soil	NHLVLEHLSGVKGGFPLKEAYYLKLSLFQGVEYFF
Ga0310686_1019761371	3300031708	Soil	YQGDIFILNHLVLEHLSGVKGGCPLEEDYYLKLSLFEGIEYFS
Ga0310686_1020477001	3300031708	Soil	IYQGDIFILNHLVLEHLSGVKGGCPLEEAYYLKLSLFQGVE
Ga0310686_1020750701	3300031708	Soil	LNHLVLEHLSGVKGGFPLEEAYYLKLSLFQGVEYFF
Ga0310686_1021499141	3300031708	Soil	LLVSYIYQGEIFILNHHVLEHLSGVKGGFPLEEAYYLKFSLFQGVEYFF
Ga0310686_1023237762	3300031708	Soil	YQGDIFILNHLVLEHLSGVKGGCPLEEAYYLKISIFQGIEYFS
Ga0310686_1029010181	3300031708	Soil	IWNHLVLEHLCGVKGGFPLEKAYYLKLSLFQGIEYLF
Ga0310686_1029029152	3300031708	Soil	IWNHLILEHLSRVKGVCPLKEAYYLKLSLFQGVEYFL
Ga0310686_1029884191	3300031708	Soil	YLLVSYIYQGDIFILNHLVLEHLSGVKGGCPLEEAYYLKLSLFQGVEYFS
Ga0310686_1033636664	3300031708	Soil	YKYQGDIFIWNVLEHLSGVKGGFPLKEAYYLKVSLFQGVEYFF
Ga0310686_1034352511	3300031708	Soil	LSGVKGGCPLEEAYYLKFSLFQGVEYFFLGFSMLY
Ga0310686_1038380251	3300031708	Soil	QGDIFILNHLVLEHLSGVKGGCPLEEAYYLKLSLFQGVEYFSRGFCMLY
Ga0310686_1039513991	3300031708	Soil	NHLVLVHLSGVKGGCPLEEAYYLKLSLFQGVEYFS
Ga0310686_1039536292	3300031708	Soil	NHLVLEHLSGVKGGFPLEEDYYLKLSLFQGIEYFL
Ga0310686_1039586821	3300031708	Soil	NHLVLENLCGVKGGCPLEEAYYLKFFFFQGVEYLF
Ga0310686_1039805261	3300031708	Soil	ILNHLILEHLSGVKGGFPLEEAYYLKLSIFQGVEYFF
Ga0310686_1047784231	3300031708	Soil	LNHLVLEHLSGVKGGFPLKEAYYLKLSLFQGVEYFF
Ga0310686_1051504501	3300031708	Soil	IYQGDIFILNHLVLEHLSGVKGGFPLKEDYYLKLSLFQGVE
Ga0310686_1051895611	3300031708	Soil	LNHLVLEHLSGVKGGFPLEEAYYLKLSLFQGVEYFFLRFFYAILIFGS
Ga0310686_1051923762	3300031708	Soil	LNHLVLEHLSGVKGGFPLEEAYYMKLSLFQGVEYFC
Ga0310686_1051951501	3300031708	Soil	LNHLVLEHLSGVKGGCPLEEAYYLKLSLFQGVEYFF
Ga0310686_1052658681	3300031708	Soil	YIYQGDIFILNHLVHEHLSGVKGSCPLEEAYYLKLSLFQGVEYLF
Ga0310686_1054359711	3300031708	Soil	IYQGDIFILNHLVLEHLSGVKGGCPLEEAYYLKVSFFQAVEYFS
Ga0310686_1054454172	3300031708	Soil	SYIYQGDIFILNHLVLEHLSGVKGGFPLEEAYYLKLSLFQGDEYFL
Ga0310686_1054872742	3300031708	Soil	YIYQGDIFILNHLVLEHLSGVKGGCPLEEAYYLKLSLFQGIECFS
Ga0310686_1054937301	3300031708	Soil	NHLVLEHLSGVKGGFPLEEAYYLKLSLFQGIEYFSWGFYMLY
Ga0310686_1057336682	3300031708	Soil	FIWSHLVLEHLCGVKGGFPLEEAYYLKLSLFQGVEYLF
Ga0310686_1057742561	3300031708	Soil	QNENVSLVYIGDIFILNHLVLEHLSGVKGGCPLEEAYYLKFSLFQGVEYFF
Ga0310686_1059692631	3300031708	Soil	ILNHLVLEHLSGVKGGCPLEEAYYLKLSLFQGVEYFC
Ga0310686_1059721551	3300031708	Soil	ILNHLILEHLSGVKGGCPLEEAYYLKLSLFQGVEYFF
Ga0310686_1060360951	3300031708	Soil	LVSYIYQGDIFIWNHLVLEHLSGVKGGCPLEEAYYLKLSLFQDIK
Ga0310686_1060576031	3300031708	Soil	ILNHLVLEHLSGVKGGFPIKEAYYLKLSLFQGVEYFF
Ga0310686_1060919162	3300031708	Soil	SYIYQGDIFILNHLVLEHLSGVKGGCPLEEAYYLILSLFQGVEYFS
Ga0310686_1060987551	3300031708	Soil	QGDIFILNHLVLEHLSGVKGGCPLEEDYYLKLSLFQGVEYFF
Ga0310686_1061005842	3300031708	Soil	QGDIFILNHLVLEHLSGVKGGCPLEEAYYLKFSLFQGVEYFF
Ga0310686_1061045341	3300031708	Soil	QGDIFILNHLVLEHLSGVKGGCPLEEAYYLKLSLFQGVAYFS
Ga0310686_1061092931	3300031708	Soil	QGDIFILNHLVLEHLSGVKGGCPLKEAYYLKLSLFQGVEYFF
Ga0310686_1062954421	3300031708	Soil	LIVSYIYQGDIFILNHLVLEHLSGVKGGCPLEEAYYLKFSFFQGVEYFF
Ga0310686_1063640111	3300031708	Soil	LLNHLVLEHLSGVKGGCPLEEAYYLKLSLFQGIEYFF
Ga0310686_1065274121	3300031708	Soil	IFILNHLVLEHLSGVKGGCPLEEAYYLKLSLFQGVEYLS
Ga0310686_1065306081	3300031708	Soil	IFILNHIVLEHLSGVKGGFPLEEAYYLKLSLFQGIEYFS
Ga0310686_1067300662	3300031708	Soil	YIYQGDIFILNHLVLEHLSGVKGGFPLEEAYYLKLSLFQGVECFF
Ga0310686_1067883671	3300031708	Soil	SYIYQGDIFILNHLVLEHLSGVKGGFPLEEAYYMKLSLFQGVEYFS
Ga0310686_1067947902	3300031708	Soil	SYIYQGDIFILNHLVLENLSGVKGGCPLEEAYFMNLSLFQGIKELL
Ga0310686_1071780511	3300031708	Soil	DIFILNHLVVEHLSGVKGGCPLEEAYDLKFSLFQGVEYFF
Ga0310686_1071814102	3300031708	Soil	YQGDIFILNHLVLEHLSGVKGGCPLEEAYYLKLSLFQGVDYFS
Ga0310686_1072036211	3300031708	Soil	LNHLVLEHLSGVKGGCPLEEAYYLKLSLFQGVEYLC
Ga0310686_1072110603	3300031708	Soil	LNHLVLEHLSGVKGGFPLEEAYYLKLSLFQGVEYFS
Ga0310686_1072206421	3300031708	Soil	LVSYIYQGDIFILNHLVLEHLSGVKGGCPLEEAYYLKLSFFQGIEYFS
Ga0310686_1078617561	3300031708	Soil	FILNHLVLEHLSGVKGGCPLEEAYYLKLSLFQGVEYFS
Ga0310686_1079694281	3300031708	Soil	GDIFILNHLVLEHLSGVKGGFPLEEAYYLKLSRFQGIKYFF
Ga0310686_1079772231	3300031708	Soil	GDIFILNHLVLEHLSGVKGGCPLEEAYYLKLSLFQGLEYFF
Ga0310686_1079792051	3300031708	Soil	GDIFILNHLILEHLSGVKGGCPLEEAYYLKLSLFQGVEYFS
Ga0310686_1100728531	3300031708	Soil	NHLVLEHLSGVKGGFPLEEAYYLKLSLFQGIEYFF
Ga0310686_1106331731	3300031708	Soil	QGDIFILNHLVLEHLSGVKGGFPLEEAYYLKLSLFQGVEYFFRGFSMLY
Ga0310686_1107879411	3300031708	Soil	SYIYQGDIFILNHLVLEHLSGVKGGCPLEEAYYLKLSLFQGVKYFS
Ga0310686_1109216553	3300031708	Soil	IFNHLVLEHLSGVKGGCPLEEAYYLKLSLFQGVEYFF
Ga0310686_1111359181	3300031708	Soil	VSYIYQGDIFILNHLVLEHLSGVKGGCPLEEAYYLILSLFQGVEYFS
Ga0310686_1112583701	3300031708	Soil	NHLVLEHLCGVKGGCPLEEAYYLKLSLFQGVDYLF
Ga0310686_1112611392	3300031708	Soil	NHLVLEHLSGVKGCCPLEEAYYLKLSLFQGVEYFS
Ga0310686_1112628231	3300031708	Soil	NHLVLEHLSGVKGGFPLEEAYYMKLSLFQGVEYFF
Ga0310686_1112685642	3300031708	Soil	NHLVLEHLSGVKGACPLEEAYYLKLSLFQGVEYFS
Ga0310686_1118988492	3300031708	Soil	SYIYQGDIFILNHLVLEHLSGVKGGFPLEKDYYLKLSLFKGVE
Ga0310686_1119798122	3300031708	Soil	GDIFILNHLVLEHLSGVKGGCPLEEAYYLKLSLFQGVEYLS
Ga0310686_1121365251	3300031708	Soil	GDIFILNHLVLEHLSGVKGGCPLEEAYYLKLSLFQGVEYFFLGFSMLY
Ga0310686_1121384261	3300031708	Soil	GDIFILNHLVLEHLSGVKGGCPLEEAYYLKLSLFQGFEYFF
Ga0310686_1121475401	3300031708	Soil	GDIFILNHLVLEHLSGVKGGCPLEEAYYLKLSLFQGAEYFF
Ga0310686_1121490932	3300031708	Soil	GDIFILNHLVLEHLSGVKGGCPLEEAYYLKLSLFQGIEYFS
Ga0310686_1126058342	3300031708	Soil	LNHLVLEHLSGVKGGCPIEEDYYLKLSFLQGVEEFS
Ga0310686_1127101981	3300031708	Soil	YIYQGDIFILNHLVLEHLSGVKGGCPLEEAYYMKLSIFQGVE
Ga0310686_1127122942	3300031708	Soil	VLEHLSGVKGGCPLEEAYYLKLSIFQGVEYFFGGFSMLY
Ga0310686_1130468541	3300031708	Soil	LVSYIYQGDIFILNHLVLENLSGVKGGFPLEEAYYLKLSLFQVVEYFF
Ga0310686_1130659041	3300031708	Soil	FILNHLVLEHLSGVKGGCPLEEAYYMKLSLFQDVEYFF
Ga0310686_1134893731	3300031708	Soil	LLVSYIYQGDIFILNHLVLEHLSGVKGGCPLEEAYYLNLSLFQGIEYLF
Ga0310686_1134919291	3300031708	Soil	LLVSYIYQGDIFILNHLVLEHLSGVKGGYPLEEDYYLKLSLFQGVEYFF
Ga0310686_1134969611	3300031708	Soil	LLVSYIYQGDIFILNHLGLEHLSGVKGGCPLEEAYYLKLSLLQGVEYFS
Ga0310686_1140911721	3300031708	Soil	QGDIFILNHLVLEHLSGVKGGFPLEEAYYLKLSLFQGVEYFF
Ga0310686_1140966281	3300031708	Soil	QGDIFILNHLVLEHLSGVKGGFPLEEAYYMKLSLFQGVEYFF
Ga0310686_1140987741	3300031708	Soil	QGDIFILNHLVLEHLSGVKGGCPLEEAYYLILSLFQGVEYFS
Ga0310686_1141030391	3300031708	Soil	QGDIFILNHLVLEHLSGVKGGCPLEEAYYLKLSLFQGIEYFF
Ga0310686_1141063271	3300031708	Soil	QGDIFILNHLVLEHLSGVKGGCPLEEAYYLKLSLFQGVEYFSSGFSMLY
Ga0310686_1144364391	3300031708	Soil	LYLLVSYIYQGDIFILNHLVLEHLSGVKGGCPLEEDYYLKLSLFQGVEYFL
Ga0310686_1146978661	3300031708	Soil	YLLVSYIYQGDIFILNHLVLEHLSGVKGGCPLEEAYYLKLSLFQAVEYLLLGFSMLY
Ga0310686_1149729231	3300031708	Soil	ILNHLVLEHLSGIKGGYPLEEAYYLKLSLFQGGEYFF
Ga0310686_1151612821	3300031708	Soil	VSYIYQGDIFILNHLVLEHLSGVKGGCPLEEAYYMNLSLFQGIEYFF
Ga0310686_1153074681	3300031708	Soil	FNLNHLVLENLSGGIGDYPHEEAYYLKLSLFQGVEYFF
Ga0310686_1156929801	3300031708	Soil	VSYIYQGDIFILNHLVLEHLSGVKGGFPLEEAYYLKLSLFQGIEYFF
Ga0310686_1156988511	3300031708	Soil	VSYIYQGDIFILNHLVLEHLSGVKGGCPLEEAYYLKLSLFQGFEYFS
Ga0310686_1157010381	3300031708	Soil	VSYIYQGDIFILNHLVLEHLSGVKGGCPLEEAYYLKLSLFQGIEYFS
Ga0310686_1157081901	3300031708	Soil	VSYIYQGDIFILNHLVLEHLSGVKGGCPLKEAYYLKLSLFQGVEYFF
Ga0310686_1161585441	3300031708	Soil	LYLLVSYIYQGDIFILNHLVLEHLSGVKGGCPLEEAYYLKLSRFQGVEYFF
Ga0310686_1162192842	3300031708	Soil	IFILNHLVLEHLSGVKGGCPLEEAYYLKLSLFQGVEYFF
Ga0310686_1162333591	3300031708	Soil	NHLVLEHLSGVKGGCPLEEAYYLKLSIFQGVEYFS
Ga0310686_1163234691	3300031708	Soil	YIYQGDIFILNHLVLEHLSEVKGGFPLEEAYYLKLSHFQGVEYFS
Ga0310686_1164765923	3300031708	Soil	YLLVSYIYQGDIFILNHLVLEHLSGVKGGCPLEEAYYLKLSLCQGVDYLL
Ga0310686_1165801831	3300031708	Soil	IFILNHLVLEHLSGVKGGFPLEEAYYLKLSLFQGVEYFC
Ga0310686_1165998511	3300031708	Soil	GDIFIWNHLVLEHLCGVKGGFPLEEAYYLKLSLFQGIEYLF
Ga0310686_1166021211	3300031708	Soil	VSYIYQGDIFILNHLVLEHLSGVKGGCPLEEAYYLKLSRFEGVEYFF
Ga0310686_1166966152	3300031708	Soil	QEDIFIWNHLVLEHLSGVKGGCPLEEAYYLKLSLFQGIEYFF
Ga0310686_1168180863	3300031708	Soil	YLLVSYIYQGDIFILNHLVLEHLSGVKGGFPLEEAYYLKLSLFQGVEYFS
Ga0310686_1168218511	3300031708	Soil	LYLLVSYIYQGDIFILNHLVLEHLSGVKGGFPLEEAYYLKLS
Ga0310686_1174564711	3300031708	Soil	GDIFILNHLVLEHLSGVKGCCPLEEAYYLKLSLFQGVEYIF
Ga0310686_1174586051	3300031708	Soil	ILNHIVLEHLSGVKGGFPLEEAYYLKLSLFQGIEYFF
Ga0310686_1174598541	3300031708	Soil	GDIFILNHLVLEHLSGVKGGFPLEEAYYLTLSLFQGVKYFF
Ga0310686_1176570061	3300031708	Soil	IYQGDIFIWNHLVLEHLCGVKGGFPLKEAYYLKFSLFQGVEYLF
Ga0310686_1177140581	3300031708	Soil	VSYIYQGDIFILNHLVLEHLSGVKGVCPLEEAYYLKLSLFQGIEYFL
Ga0310686_1177378671	3300031708	Soil	QGDIFILNHLVLEHLSGVKGGCPLEEAYYLKLSLFQGIEYFC
Ga0310686_1177401391	3300031708	Soil	YQGDIFILNHLVLEHLSGVKGGCPLKEAYYLKLCLFQGVEYFF
Ga0310686_1177428722	3300031708	Soil	YQGDIFILNHLVLEHLSGVKGGCPLKEAYYLKLSLFQGIEYFF
Ga0310686_1182359791	3300031708	Soil	YQGDIFILNHLVLEHLSGEKGGCPLEEANYLKLSLFQGIDYFS
Ga0310686_1185365422	3300031708	Soil	VSYIYQGDIFILNHLVLEHLSGVKGGFPLEEAYYLKLSLFQGVAYLF
Ga0310686_1187006381	3300031708	Soil	YIYQGDIFILNHLVLEHLSGVKEGFPIEESYYLKLSLFQGVDYFS
Ga0310686_1188384741	3300031708	Soil	IYQGDIFILNHLVLEHLSGVKGGFPLEEAYYLKLSLF
Ga0310686_1188414351	3300031708	Soil	IYQGDIFILNHLVLEHLSGVKGGFPLEEAYYLKLSLFQGIE
Ga0310686_1188448361	3300031708	Soil	IYQGDIFILNHLVLEHLSGVKGGCPLEEAYYLKLSLFQGIEYCF
Ga0310686_1194160501	3300031708	Soil	LKHLVLEHLSVVKGGFPLEEAYYLKLSLFQGVEYFS
Ga0310686_1195367952	3300031708	Soil	YIYQGDIFILNHLVLEHLSGVKGGCPLEEAYYLILSLFQGVD
Ga0316214_10230381	3300033545	Roots	QGDIFILNHLLLEHLSGVKGGFPLKEAYYLKLSLFQGVEYFF
Ga0316212_10088721	3300033547	Roots	IFILNHLVLEHLSGVKGGFPLEEAYYLILSLFQGVEYFSLGFYMLY
Ga0316216_10039831	3300033548	Roots	ILNHIVLEHLSGVKGGFPLEEAYYLKLSLFQGVEYFF
Ga0316216_10207631	3300033548	Roots	GDIFILNRLVLEHLSGVKGGCPLKEAYYLKLSLFQGIEYFS

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F053726

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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