Metagenome Family F053670

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F053670
Family Type	Metagenome
Number of Sequences	141
Average Sequence Length	52 residues
Representative Sequence	MLIRLFIAILALILCAIAARADKPIVIKDSEAIQYVGKEVEVRGRV
Number of Associated Samples	65
Number of Associated Scaffolds	141

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	73.57 %
% of genes near scaffold ends (potentially truncated)	96.45 %
% of genes from short scaffolds (< 2000 bps)	95.74 %
Associated GOLD sequencing projects	56
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.36

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (87.234 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (48.936 % of family members)
Environment Ontology (ENVO)	Unclassified (72.340 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (67.376 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 47.30% β-sheet: 0.00% Coil/Unstructured: 52.70%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.36
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.36
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 141 Family Scaffolds
PF12728	HTH_17	3.55
PF00565	SNase	2.84
PF13414	TPR_11	1.42
PF00550	PP-binding	0.71
PF01402	RHH_1	0.71
PF07237	DUF1428	0.71
PF13676	TIR_2	0.71
PF00196	GerE	0.71
PF00359	PTS_EIIA_2	0.71
PF02737	3HCDH_N	0.71
PF01513	NAD_kinase	0.71
PF05721	PhyH	0.71
PF13407	Peripla_BP_4	0.71

COG ID	Name	Functional Category	% Frequency in 141 Family Scaffolds
COG0240	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	0.71
COG0287	Prephenate dehydrogenase	Amino acid transport and metabolism [E]	0.71
COG0677	UDP-N-acetyl-D-mannosaminuronate dehydrogenase	Cell wall/membrane/envelope biogenesis [M]	0.71
COG1004	UDP-glucose 6-dehydrogenase	Cell wall/membrane/envelope biogenesis [M]	0.71
COG1250	3-hydroxyacyl-CoA dehydrogenase	Lipid transport and metabolism [I]	0.71
COG1748	Saccharopine dehydrogenase, NADP-dependent	Amino acid transport and metabolism [E]	0.71
COG2084	3-hydroxyisobutyrate dehydrogenase or related beta-hydroxyacid dehydrogenase	Lipid transport and metabolism [I]	0.71
COG5285	Ectoine hydroxylase-related dioxygenase, phytanoyl-CoA dioxygenase (PhyH) family	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.71
COG5507	Uncharacterized conserved protein YbaA, DUF1428 family	Function unknown [S]	0.71

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	87.23 %
All Organisms	root	All Organisms	12.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	87.23 %
cellular organisms	root	All Organisms → cellular organisms	12.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	87.23 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	12.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	87.23 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	4.96 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	2.84 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	87.23 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2.84 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.42 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.71 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	87.23 %
Cellvibrionales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales	0.71 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.71 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.71 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.71 %
Spartobacteria	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	87.23 %
Chthoniobacterales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales	0.71 %
Porticoccaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Porticoccaceae	0.71 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.71 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.71 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	87.23 %
Chthoniobacteraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	0.71 %
Porticoccus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Porticoccaceae → Porticoccus	0.71 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.71 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.71 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	87.23 %
unclassified Porticoccus	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Porticoccaceae → Porticoccus → unclassified Porticoccus	0.71 %
Chthoniobacter	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter	0.71 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.71 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.71 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	87.23 %
Porticoccus sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Porticoccaceae → Porticoccus → unclassified Porticoccus → Porticoccus sp.	0.71 %
Chthoniobacter flavus	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus	0.71 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.71 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.71 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.71 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459009\|GA8DASG02I0S6V	Not Available	508	Open in IMG/M
3300004633\|Ga0066395_10446316	Not Available	737	Open in IMG/M
3300005445\|Ga0070708_101161624	Not Available	722	Open in IMG/M
3300005445\|Ga0070708_101843410	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	561	Open in IMG/M
3300005471\|Ga0070698_100229184	Not Available	1791	Open in IMG/M
3300005471\|Ga0070698_102049118	Not Available	526	Open in IMG/M
3300005518\|Ga0070699_100941473	Not Available	791	Open in IMG/M
3300005536\|Ga0070697_101758567	Not Available	555	Open in IMG/M
3300005536\|Ga0070697_102031720	Not Available	514	Open in IMG/M
3300005713\|Ga0066905_101953679	Not Available	544	Open in IMG/M
3300005764\|Ga0066903_106839997	Not Available	592	Open in IMG/M
3300005764\|Ga0066903_108349626	Not Available	529	Open in IMG/M
3300010043\|Ga0126380_12114217	Not Available	518	Open in IMG/M
3300010043\|Ga0126380_12236644	Not Available	506	Open in IMG/M
3300010047\|Ga0126382_11016646	Not Available	728	Open in IMG/M
3300010047\|Ga0126382_11860849	Not Available	568	Open in IMG/M
3300010047\|Ga0126382_12172683	Not Available	533	Open in IMG/M
3300010048\|Ga0126373_11824561	Not Available	671	Open in IMG/M
3300010339\|Ga0074046_10166335	Not Available	1400	Open in IMG/M
3300010358\|Ga0126370_10944897	Not Available	782	Open in IMG/M
3300010358\|Ga0126370_12654455	Not Available	502	Open in IMG/M
3300010361\|Ga0126378_10558069	Not Available	1260	Open in IMG/M
3300010366\|Ga0126379_12177039	Not Available	656	Open in IMG/M
3300010376\|Ga0126381_100678287	Not Available	1472	Open in IMG/M
3300010376\|Ga0126381_102678318	Not Available	713	Open in IMG/M
3300010376\|Ga0126381_102815932	Not Available	694	Open in IMG/M
3300012205\|Ga0137362_11778854	Not Available	503	Open in IMG/M
3300012582\|Ga0137358_11030771	Not Available	530	Open in IMG/M
3300012960\|Ga0164301_11830153	Not Available	511	Open in IMG/M
3300012971\|Ga0126369_10537317	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Porticoccaceae → Porticoccus → unclassified Porticoccus → Porticoccus sp.	1232	Open in IMG/M
3300012971\|Ga0126369_12087060	Not Available	654	Open in IMG/M
3300012971\|Ga0126369_13412806	Not Available	520	Open in IMG/M
3300016294\|Ga0182041_10560806	Not Available	999	Open in IMG/M
3300016294\|Ga0182041_11112024	Not Available	718	Open in IMG/M
3300016294\|Ga0182041_11202420	Not Available	691	Open in IMG/M
3300016319\|Ga0182033_10411467	Not Available	1145	Open in IMG/M
3300016319\|Ga0182033_10679972	Not Available	900	Open in IMG/M
3300016319\|Ga0182033_10683507	Not Available	897	Open in IMG/M
3300016319\|Ga0182033_11401974	Not Available	629	Open in IMG/M
3300016319\|Ga0182033_11842103	Not Available	549	Open in IMG/M
3300016319\|Ga0182033_11876406	Not Available	545	Open in IMG/M
3300016341\|Ga0182035_10310011	Not Available	1298	Open in IMG/M
3300016341\|Ga0182035_10617664	All Organisms → cellular organisms → Bacteria → Proteobacteria	938	Open in IMG/M
3300016357\|Ga0182032_10039026	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2986	Open in IMG/M
3300016357\|Ga0182032_11179996	Not Available	658	Open in IMG/M
3300016357\|Ga0182032_11433188	Not Available	599	Open in IMG/M
3300016357\|Ga0182032_11601829	Not Available	566	Open in IMG/M
3300016371\|Ga0182034_10408475	All Organisms → cellular organisms → Bacteria	1116	Open in IMG/M
3300016371\|Ga0182034_10469502	Not Available	1045	Open in IMG/M
3300016371\|Ga0182034_10922825	Not Available	752	Open in IMG/M
3300016371\|Ga0182034_11346592	Not Available	623	Open in IMG/M
3300016371\|Ga0182034_11660847	Not Available	561	Open in IMG/M
3300016387\|Ga0182040_10298165	Not Available	1232	Open in IMG/M
3300016387\|Ga0182040_11207381	Not Available	636	Open in IMG/M
3300016387\|Ga0182040_11352806	Not Available	602	Open in IMG/M
3300016387\|Ga0182040_11480160	Not Available	576	Open in IMG/M
3300016387\|Ga0182040_11503432	Not Available	572	Open in IMG/M
3300016404\|Ga0182037_10381941	Not Available	1156	Open in IMG/M
3300016404\|Ga0182037_10930762	Not Available	755	Open in IMG/M
3300016404\|Ga0182037_11683566	Not Available	565	Open in IMG/M
3300016404\|Ga0182037_11920586	Not Available	530	Open in IMG/M
3300016404\|Ga0182037_11998912	Not Available	520	Open in IMG/M
3300016422\|Ga0182039_11378754	Not Available	640	Open in IMG/M
3300016422\|Ga0182039_11601480	Not Available	594	Open in IMG/M
3300016445\|Ga0182038_10695159	Not Available	885	Open in IMG/M
3300016445\|Ga0182038_11376704	Not Available	632	Open in IMG/M
3300016445\|Ga0182038_12027825	Not Available	521	Open in IMG/M
3300021178\|Ga0210408_11448774	Not Available	516	Open in IMG/M
3300021560\|Ga0126371_11369196	All Organisms → cellular organisms → Bacteria	839	Open in IMG/M
3300021560\|Ga0126371_12583074	Not Available	615	Open in IMG/M
3300025922\|Ga0207646_10912218	Not Available	779	Open in IMG/M
3300031545\|Ga0318541_10423190	Not Available	745	Open in IMG/M
3300031545\|Ga0318541_10576262	Not Available	630	Open in IMG/M
3300031561\|Ga0318528_10503185	Not Available	651	Open in IMG/M
3300031573\|Ga0310915_11084196	Not Available	557	Open in IMG/M
3300031679\|Ga0318561_10685292	Not Available	564	Open in IMG/M
3300031679\|Ga0318561_10761292	Not Available	532	Open in IMG/M
3300031719\|Ga0306917_10281793	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1280	Open in IMG/M
3300031719\|Ga0306917_10604573	Not Available	862	Open in IMG/M
3300031719\|Ga0306917_11556045	Not Available	508	Open in IMG/M
3300031744\|Ga0306918_10299805	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	1238	Open in IMG/M
3300031744\|Ga0306918_10533117	Not Available	919	Open in IMG/M
3300031744\|Ga0306918_10691788	Not Available	798	Open in IMG/M
3300031744\|Ga0306918_10873865	Not Available	701	Open in IMG/M
3300031744\|Ga0306918_11040161	Not Available	635	Open in IMG/M
3300031744\|Ga0306918_11248384	Not Available	573	Open in IMG/M
3300031754\|Ga0307475_10072440	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	2637	Open in IMG/M
3300031768\|Ga0318509_10647810	Not Available	588	Open in IMG/M
3300031771\|Ga0318546_10839115	Not Available	647	Open in IMG/M
3300031799\|Ga0318565_10263995	Not Available	837	Open in IMG/M
3300031833\|Ga0310917_10109614	All Organisms → cellular organisms → Bacteria → Proteobacteria	1786	Open in IMG/M
3300031879\|Ga0306919_10990296	Not Available	643	Open in IMG/M
3300031890\|Ga0306925_10859920	Not Available	936	Open in IMG/M
3300031890\|Ga0306925_11948724	Not Available	556	Open in IMG/M
3300031897\|Ga0318520_10293418	Not Available	978	Open in IMG/M
3300031910\|Ga0306923_10012754	All Organisms → cellular organisms → Bacteria	8635	Open in IMG/M
3300031910\|Ga0306923_10685397	Not Available	1142	Open in IMG/M
3300031910\|Ga0306923_10778548	All Organisms → cellular organisms → Bacteria → Proteobacteria	1058	Open in IMG/M
3300031910\|Ga0306923_11052725	Not Available	880	Open in IMG/M
3300031910\|Ga0306923_12368202	Not Available	527	Open in IMG/M
3300031912\|Ga0306921_11287427	Not Available	809	Open in IMG/M
3300031912\|Ga0306921_11532633	Not Available	727	Open in IMG/M
3300031941\|Ga0310912_10329948	All Organisms → cellular organisms → Bacteria	1183	Open in IMG/M
3300031941\|Ga0310912_10683781	Not Available	796	Open in IMG/M
3300031941\|Ga0310912_10913700	Not Available	675	Open in IMG/M
3300031941\|Ga0310912_11177175	Not Available	584	Open in IMG/M
3300031942\|Ga0310916_10395805	All Organisms → cellular organisms → Bacteria → Proteobacteria	1175	Open in IMG/M
3300031942\|Ga0310916_10404924	All Organisms → cellular organisms → Bacteria	1161	Open in IMG/M
3300031942\|Ga0310916_10532366	Not Available	1000	Open in IMG/M
3300031942\|Ga0310916_10854596	Not Available	764	Open in IMG/M
3300031942\|Ga0310916_11045048	Not Available	680	Open in IMG/M
3300031945\|Ga0310913_10744705	Not Available	692	Open in IMG/M
3300031945\|Ga0310913_11240355	Not Available	518	Open in IMG/M
3300031946\|Ga0310910_10301224	Not Available	1261	Open in IMG/M
3300031946\|Ga0310910_10377905	Not Available	1121	Open in IMG/M
3300031947\|Ga0310909_10090935	Not Available	2437	Open in IMG/M
3300031947\|Ga0310909_11366340	Not Available	568	Open in IMG/M
3300031954\|Ga0306926_12952684	Not Available	509	Open in IMG/M
3300031981\|Ga0318531_10440189	Not Available	590	Open in IMG/M
3300032001\|Ga0306922_10937103	Not Available	897	Open in IMG/M
3300032001\|Ga0306922_11120763	Not Available	805	Open in IMG/M
3300032001\|Ga0306922_11484167	Not Available	678	Open in IMG/M
3300032001\|Ga0306922_11708179	Not Available	623	Open in IMG/M
3300032009\|Ga0318563_10665097	Not Available	560	Open in IMG/M
3300032035\|Ga0310911_10582336	Not Available	649	Open in IMG/M
3300032035\|Ga0310911_10883344	Not Available	516	Open in IMG/M
3300032059\|Ga0318533_10946130	Not Available	632	Open in IMG/M
3300032076\|Ga0306924_10030950	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus	5808	Open in IMG/M
3300032076\|Ga0306924_11640692	Not Available	676	Open in IMG/M
3300032076\|Ga0306924_11909654	Not Available	615	Open in IMG/M
3300032076\|Ga0306924_12177326	Not Available	566	Open in IMG/M
3300032076\|Ga0306924_12452957	Not Available	524	Open in IMG/M
3300032180\|Ga0307471_102191595	Not Available	696	Open in IMG/M
3300032205\|Ga0307472_100936524	Not Available	805	Open in IMG/M
3300032261\|Ga0306920_100554626	All Organisms → cellular organisms → Bacteria	1703	Open in IMG/M
3300032261\|Ga0306920_101698321	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	895	Open in IMG/M
3300032261\|Ga0306920_103313535	Not Available	600	Open in IMG/M
3300032261\|Ga0306920_104246371	Not Available	516	Open in IMG/M
3300033289\|Ga0310914_10806361	Not Available	837	Open in IMG/M
3300033290\|Ga0318519_10708538	Not Available	616	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	90.78%
Loam	Environmental → Terrestrial → Soil → Loam	8.51%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.71%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	75.18%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	14.89%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.67%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.84%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.71%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.71%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	48.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	24.11%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	12.77%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.67%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.84%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.13%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.71%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.71%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.71%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459009	Grass soil microbial communities from Rothamsted Park, UK - July 2009 indirect DNA Tissue lysis 0-10cm	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F47_07406670	2170459009	Grass Soil	MIAVRGNELLVIKDSEAAQYVGKKVEVRGLVVSVTTSPLGTEVL
Ga0066395_104463162	3300004633	Tropical Forest Soil	MGIRLFIVILALLICIITTRADKPIVIKDSEAIQYVGKEVEVRGRVVSVTTSPLGTAFINFGG
Ga0070708_1011616243	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MGIRPLFAVLAMLLCAVVARADKPIVIKDSEAIKYVGKEVEVRGRVVSVTTSPLGTAFIN
Ga0070708_1018434102	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MRIRIFIAILGLLPCAIAVRADKPIVKKVSEAIKYVGKEVEVRGRGLVVSC*
Ga0070698_1002291841	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MVIRLFFAMLALLLCVIAARADKPILIKDSEAIQYVGKEAEV
Ga0070698_1020491181	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MLTRLFIAMLALLFCVIAVRADKPIVIKDSEAIQYVGKEAEVRGR
Ga0070699_1009414732	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MPIRLFIAMLALLLCVIAARADKPIVIKDSEAIQYVGKEAEV
Ga0070697_1017585671	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MRIGAGIVALFLCAVVTLANKPTVIKDWEAIQYVGTEVEVRGRVVSVTT
Ga0070697_1020317202	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MGIRPFFAILGLFLCAIVARADKPIVIKDSEAINYVGKEVEVRGRVVSVTTSPLG
Ga0066905_1019536792	3300005713	Tropical Forest Soil	MRIGALFAIVALLLWAIAAHADEPKVIKDSEAIQYVGKEVEVRGRVASVTTS
Ga0066903_1068399971	3300005764	Tropical Forest Soil	MRIGALFAIVALLLWAIAAHADEPKVIKDSEAIQYVGKEVEVRGRVASVTT
Ga0066903_1083496261	3300005764	Tropical Forest Soil	MAIRLFFAILGLLLCGIAARADKPIVIKDSEAIKYVGREVEVRGQVVSVTTSPLGTAFINFGGEYPNQ
Ga0126380_121142171	3300010043	Tropical Forest Soil	MLALLLCAIAARADKPIVINDSEAIHYVGKEAEVRGRVVSVTTSPLGTT
Ga0126380_122366441	3300010043	Tropical Forest Soil	MRIRLFNAILALLLCVIAAHGDEPIVIKDSEAIQYVGKEVEVRGRVASV
Ga0126382_110166462	3300010047	Tropical Forest Soil	MPIRLVIAMLALIICVIAERADKPIVIKDSEAIQSVGKEAEVRGRVVSVTISPLGTTF
Ga0126382_118608492	3300010047	Tropical Forest Soil	MRIRLFIAILALLLCAIAARTGEPIVIRDSEAIKYVGKEVE
Ga0126382_121726832	3300010047	Tropical Forest Soil	VAIRPFFGIIGLILCTIAARAGKPIVIKDSKAIKYVGKKV
Ga0126373_118245611	3300010048	Tropical Forest Soil	MLIRLFIATLALLVCAIAARGDKPIVIKDSEAIQYVAKEAEVRGLV
Ga0074046_101663351	3300010339	Bog Forest Soil	MSPLFVILGLVLCIIAAHADELLVIKDSEAAQYVGKKVEVRGLVVSVTTSPLGTTFINFGREY
Ga0126370_109448971	3300010358	Tropical Forest Soil	MRIRLFIAILALVLCAIAVRANRPIVIKDSEAIQYVGKEVEVQGCV
Ga0126370_126544551	3300010358	Tropical Forest Soil	MLIRPFIAMLALFLCAIAARADKPVVINDSEAIHYVGKEAEVRGRVVSVTTSPLGTTFINFGGEY
Ga0126378_105580691	3300010361	Tropical Forest Soil	MRNCLFNAILALLLCVIATRANHPIVIKDSEAIQYVGKEVEVRGRVASVTTSPL
Ga0126379_121770392	3300010366	Tropical Forest Soil	MRIGALLAILTLLLCAIVAHADKPIVIKDSEAIQYVGKEVEVRG
Ga0126381_1006782875	3300010376	Tropical Forest Soil	MRIRLFIAIFALPLCAIVAHADKPITIKDSEAIQYVG
Ga0126381_1026783181	3300010376	Tropical Forest Soil	MAMIYRMLHCYIEMRIRLFIAIFVLPLCAIVAHADKPITIKDSDAIQYVGKEAEVRGRVVSVTTSPLGTTFIS
Ga0126381_1028159321	3300010376	Tropical Forest Soil	MRIYLFITILTLLLCTIAAPGEKPIVIKDSEAIQYVGKE
Ga0137362_117788541	3300012205	Vadose Zone Soil	RPLFAVLALLLSVAAARADKPIVIKDSEAIKYVGKEVEVRGKVVSVICND*
Ga0137358_110307712	3300012582	Vadose Zone Soil	MTIRRFFAILAFLLCTFEARADKPIIVKDSEAIQYVGKEVEVRGY
Ga0164301_118301531	3300012960	Soil	MLPRLFIAMLALLLCVIAARADKPRVIKEWEAIQYV
Ga0126369_105373173	3300012971	Tropical Forest Soil	MRIGALFAIVALLLWAIAAHADEPKVIKDSEAIQYVGKEVEVRGRVASVTTSPLGTTFINFG
Ga0126369_120870601	3300012971	Tropical Forest Soil	MLIRPFIAMLALFLCAIAARADKPIVINDSEAIHYVGKEAEVRGRVVSVTTSPLGTT
Ga0126369_134128061	3300012971	Tropical Forest Soil	MLIRLFIAILALLLCAIVTHADKPIVIKDSEAMEYVGREVEVRGRVVSVTTSPLGTTFINFGGDYPKQT
Ga0182041_105608062	3300016294	Soil	MYPTEFAMRIRLFIAILTLLLCGIVAHGEKPIVIKDSEAI
Ga0182041_111120241	3300016294	Soil	MPPRLFIIMLALLLCVIAARADKPIVIKESEAIQYVGKEAEV
Ga0182041_112024203	3300016294	Soil	MPIRLFSAMLALLPCVIAARADKPIVIKDSEAIQYVGKEVEVRGRVVSVTTSPLGTAFINFGG
Ga0182033_104114671	3300016319	Soil	MLIRLFIAILALILCAIAARADKPIVIKDSEAIQYVGKEVEVRGRV
Ga0182033_106799721	3300016319	Soil	MRIRLFVAILALLLCAIVARTGEPIAIKDSEAIKYVGKEVEVRGRVVSVTTS
Ga0182033_106835071	3300016319	Soil	MRIRFFIVIIALLLWAIAGRTGEPIVIKDSEAIEYVGKEVEVRGRVVSVTTSPLGTT
Ga0182033_114019741	3300016319	Soil	MRIRHFIAFLALLFCMIAVRADKPIVIKDSEAIQYVGKEVEVRGRVVSVTSSPLGTAFIN
Ga0182033_118421032	3300016319	Soil	MRIRPFIAILGLLLCAIAARADKPLVIRDSEAIKYVGKEVEVYGQVVSVTTS
Ga0182033_118764063	3300016319	Soil	MPIRLFIAMLALLPCVIAARADKPIVIKDSEAIQYVGKEAEVRGRVVSVT
Ga0182035_103100113	3300016341	Soil	MLIRLFIAMLALLLCTIAARTGEPIVIKDSEAIKYVGKEVEEGRVVSVTTSPLGTTFINFGGEYPHQTFAGFIA
Ga0182035_106176643	3300016341	Soil	MHIGALVAILALLLCAIVAHAEKPIVIKDSEAIRYVGKEVEV
Ga0182032_100390261	3300016357	Soil	MVFSMGIRLFIAIFALLLCAIAVPANVPPVVKDSEAIRYVGKEVEVR
Ga0182032_111799961	3300016357	Soil	MRIRLFVAILALLLCAIVPRAGELILIKDLEAIKYVGKEVEVRGRVVSVTTSPLGTTFINFGG
Ga0182032_114331882	3300016357	Soil	MRIHPFIAIFALILCAAVARADKPIVIKDSQAIQYIGKEVEVHG
Ga0182032_116018292	3300016357	Soil	MRIGALVGILALLLFAIVARTGEPIVIKDSEAIKYVGKEAEVRGRVVSVTTSPLGTTFINFG
Ga0182034_104084751	3300016371	Soil	MRIRLFIAILALLLCAIAARTGEPIVIKDSEAIKYVGKEVEVR
Ga0182034_104695021	3300016371	Soil	MHIGALVAILALLLCAIVAHAEKPIVIKDSEAIRYVGKEVEVQG
Ga0182034_109228252	3300016371	Soil	MGKRPFFAIIGLLLCAIAACADKPIVIKDSEAIHYVGKEVEVRGQVVSVTSSPLGTAFIN
Ga0182034_113465921	3300016371	Soil	MRIRFFMVIIVLLLWAIAGRTGEPIVIKDSEAIEYV
Ga0182034_116608471	3300016371	Soil	MLIRPFIAMLALLLCAIAARADKPIVINDSEAIHYVGKEAEVRGRVVSVTTSPLGTTFINFGG
Ga0182040_102981652	3300016387	Soil	MRAGALFAILALLLCAIAAHADKPIVIKDSEAIRYVGKEVEVRGR
Ga0182040_112073811	3300016387	Soil	MRVGALFAILALLLCAIVAHADKPIVIKDSEAIRYVGKEVEVRGRVV
Ga0182040_113528061	3300016387	Soil	MQIRLFIAMLALVLCAIAAHADEPKVIKDSEAIRYVGKEVEVRGWVVSVTTSPLGTTFISFGRE
Ga0182040_114801601	3300016387	Soil	MGKRPFFAIIGLLLCAIAACADKPIVIKDSEAIHYVGKEVEVRGQVVSVTSSPLGTAFI
Ga0182040_115034322	3300016387	Soil	MRIRIFITILALLLCVIVARADEPTVIKDLEAIRYVGKEVEVRGRVVSVT
Ga0182037_103819411	3300016404	Soil	MRIGALLAILALLLCAIVAHADKPIVIKDSEAIQYVGKEVEVR
Ga0182037_109307621	3300016404	Soil	MRPRLFVAILALLFCAIAARPGEPIVIKDSETIKYVGKEVRGRV
Ga0182037_116835662	3300016404	Soil	MLIRLFIAMLALLLCTIAARTGEPIVIKDSEAIKYVGKEVEVRGRVISV
Ga0182037_119205862	3300016404	Soil	MQIRLFIAMLALVLCAIAAHADEPKVIKDSEAIRYVGKEVEVRGRVVSVTTSPFGTTFISFGREFPRQTFAGF
Ga0182037_119989122	3300016404	Soil	MRIRLFNAILALLVCVIAAPANDPIVIKDSEAIQYVGKEVEVRGRVVSVTSSPLGT
Ga0182039_113787542	3300016422	Soil	MRIRLFNAILALLVCVIAARANDPTVIKDSEAIQYVGREVEVRGRVTSVTTSPFGTTFIN
Ga0182039_116014801	3300016422	Soil	MRIRLFNAILALLLCVIAARGDEPIVIKDSEAIQYVGKEVEVRGRVASVTTSPL
Ga0182038_106951591	3300016445	Soil	MRIRPFIAILGLLLCAIAARADKPLVIRDSEAIKYVGKEVEV
Ga0182038_113767041	3300016445	Soil	MRIRLFVAILTLLLCEIAPHGEKPIVIKDSEAIKYVGKE
Ga0182038_120278252	3300016445	Soil	MLIRLFIAIFVLLLCTIVARADKPIVIKDSEAMEYVGKEVEMRGRVVSVTTSPLGTAFINFGGEYP
Ga0210408_114487741	3300021178	Soil	MGYVAMRIRLLIAILALLLCAILARADKPIVIKDSEAIQYVGKEVEVRGRVASVTTSPLG
Ga0126371_113691962	3300021560	Tropical Forest Soil	MIYRMLHCYIEMRIRLFIAIFVLPLCAIVAHADKPITIKDSDAIQYVGKEAEVRGRVV
Ga0126371_125830742	3300021560	Tropical Forest Soil	MRIRLFVAILTLLLCEIAPHGEKPIVIKDSETIKYVGKEVEVQGRVVSVTTSPPGTTFIN
Ga0207646_109122182	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MRIRIFIAILGLLPCAIAVRADKPIVKKVSEAIKYVGKEVEVRGRGLVVSC
Ga0318541_104231903	3300031545	Soil	MQIRLFVPILALLLCAIAARADKPIVIKDSEAIQYVGKEVEVRGRVVSVTASPLGTTFINFGGEY
Ga0318541_105762622	3300031545	Soil	MVFSMGIRLFIAIFALLLCAIAVPANVPPVVKDSEAIRYVGKEVEVRGRVV
Ga0318528_105031851	3300031561	Soil	MLIRLFIAILALILCAIAARADKPIVIKDSEAIHYVGKEAEVRGRVVSVT
Ga0310915_110841961	3300031573	Soil	MRIRLFVAILALLLCAIVPRAGELILIKDLEAIKYVGKEVEVRGRVVSVTTSPLGTT
Ga0318561_106852922	3300031679	Soil	MRIRLFVAILTLLLCAIAARGNEPIVIKDSEAILYVGKEVEVRGCVVCVTTSPLG
Ga0318561_107612922	3300031679	Soil	MHIGALVAILALLLCAIVAHAEKPIVIKDSEAIRYVGKEVEVQGRVVSVTTSHW
Ga0306917_102817931	3300031719	Soil	MVFSMGIRLFIAIFALLLCAIAVPANVPPVVKDSEAIRYVGKEVEVRGR
Ga0306917_106045731	3300031719	Soil	MQIRLFVPILALLLCAIAARADKPIVIKDSEAIQYVG
Ga0306917_115560451	3300031719	Soil	VFGISDFAMRVGALFAILALVLCAIVAHADKPIVVKDSEAIQYIGKEAEVRGRVVSVTASPLGTTFINFGGEY
Ga0306918_102998052	3300031744	Soil	MRPRLFVAILALLFCAIAARPGEPIVIKDSETIKYVGKEVRGRVVSDDQPAGDDIY
Ga0306918_105331171	3300031744	Soil	MQIRLFVAILTLLLWEIAAHGEKPIVIKDSEAIKYVGKEVEVRGRVVSVTTSPL
Ga0306918_106917881	3300031744	Soil	MRIRLFVAILTLLLCAIAARGNEPIVIKDSEAILYVGKEVEVRGCVVCVTTSPLGTTFIN
Ga0306918_108738651	3300031744	Soil	MRIRLFVAILTLLLCEIAPHGEKPIVIKDSETIKYVGKEVEVQGRVVSVTTSPPGTTFINLP
Ga0306918_110401611	3300031744	Soil	MLIRVFIAILALLLCVIAAPADKPKVIKDSEATRYVGEEVEVRGRVVS
Ga0306918_112483842	3300031744	Soil	MRIGALVGILALLLCAIVAHAEKPIVIKDSEAIRYVGKEVEVQGRVVSVTTSHWVRH
Ga0307475_100724407	3300031754	Hardwood Forest Soil	MGHFATRIRLLIAILALLLCAILARADKPIVIKDSEAIQYVGKEVEVRGRGASVTTS
Ga0318509_106478102	3300031768	Soil	MQIRLFIAMLALVLCAIAAHADEPKVIKDSEAIWYIGKEVEVRGRVVSVTTSPLGTTFISFG
Ga0318546_108391151	3300031771	Soil	MQIRLFVPILALLLCAIAARADKPIVIKDSESIQYVGKEVEVRGRVVSVTTSPLGTTFI
Ga0318565_102639952	3300031799	Soil	VIIALLLWAIAGRTGEPIVIKDSEAIEYVGKEVEVRGRVVSVTT
Ga0310917_101096141	3300031833	Soil	MHIGALVAILALLLCAIVAHAEKPIVIKDSEAIRYVGKEVEVQGRVVSV
Ga0306919_109902962	3300031879	Soil	MRILLFVAILALLLCAIVARTGEPIAIKDSEAIKYVGKEVEVRGRVVSVTTSPLGTTFIN
Ga0306925_108599201	3300031890	Soil	MRVGALFAILALLLCAIVAHADKPIVIKDSEAIRYVGKEVEVRGRV
Ga0306925_119487241	3300031890	Soil	MRIGALLAILALLLCAIVAHADKPIVIKDSEAIQYVGKEVEVRGRVVYVTTS
Ga0318520_102934181	3300031897	Soil	MWIRLFIAIFALLLCAAVARADKPAVIKDSEAIKYVGKEVEVRGRVVSVTTSPLGTA
Ga0306923_1001275412	3300031910	Soil	MRIGALLAILALLLCAIVAHADKPIVIKDSEAIQYVGKEVEVRGRVVYVTTSPLGTTFISFGREYPRQTF
Ga0306923_106853972	3300031910	Soil	MLIRLFIGMLALLLCAIAAHADKRIVIKDSEAIQYVGKEAEVRGRVVSVTTSPLGSAFINFGGE
Ga0306923_107785481	3300031910	Soil	MLIRLFIAMLALLLFVIVARADKPRVIKDWEAIQYVGKEAEVRGRVISVTTSPLGTTF
Ga0306923_110527252	3300031910	Soil	MRIRLFNAILALLLCVIAARGDEPIVIKDSEAIQYVGKEVEVRGRVASVTTSPLG
Ga0306923_123682021	3300031910	Soil	MLIRLFIAMLALLLCTIAARTGEPIVIKDSEAIKYVGKEVEVRGRVISVTTSPLGTTFINFGGE
Ga0306921_112874271	3300031912	Soil	MRIGALLAILALLLCAIVAHADKPIVIKDSEAIQYVGKEVEVRGRVVYVTTSPLGTT
Ga0306921_115326333	3300031912	Soil	MRIRLFNAILALLVCVIAAPANDPIVIKDSEAIQYVGKE
Ga0310912_103299481	3300031941	Soil	MQIRLFVAILTLLLCAIAARGNEPIVIKDSEAIQYVG
Ga0310912_106837812	3300031941	Soil	MLIRLFIAMLALLLCTIAARTGEPIVIKDSEAIKYVGKEVEVRGRVVSVTTSPLGTTF
Ga0310912_109137001	3300031941	Soil	MLIRLFIGMLALLLCAIAAHADKRIVIKDSEAIQYVGKEAEVRGRVVSV
Ga0310912_111771752	3300031941	Soil	MRIRLFIAILALLLCAIVARTGEPIVIKDSEAVKYVGKEAE
Ga0310916_103958051	3300031942	Soil	MLIRVFIAILALLLCVIAAPADKPKVIKDSEATRYVGEEVE
Ga0310916_104049243	3300031942	Soil	MRIRPFIAILGLLLCAIAARADKPLVIRDSEAIKYVGKEVEVYGQVV
Ga0310916_105323662	3300031942	Soil	MRIHLFIAILAPLLCAIAARTGEPIVIKDSEAIKYVGKKVEVR
Ga0310916_108545961	3300031942	Soil	MRIRLFFATLALLLCAIAARANEPIVIKDSEAIKYVGKE
Ga0310916_110450482	3300031942	Soil	MLIRPFIAMLALLLCAIAARADKPIVINDSEAIHYVG
Ga0310913_107447051	3300031945	Soil	MRIHLFIAILAPLLCAIAARTGEPIVIKDSEAIKYVGKEVEVRG
Ga0310913_112403552	3300031945	Soil	MQIRLFIAMLALVLCAIAAHADEPKVIKDSEAIRYVGKEVDVRGRVVSVTTSPL
Ga0310910_103012243	3300031946	Soil	MLIRLFIAMLALLLCTIAARTGEPIVIKDSEAIKYVGKEVEVRGRVVSVTTSPLGTT
Ga0310910_103779051	3300031946	Soil	MLIRLFITFLAPLLCVIAARADKPIVIKESESIQYVGKEGEVHGRVVSVTTSPTGDDISK
Ga0310909_100909357	3300031947	Soil	MRIGALLAILALLLCAIVAHADKPIVIKDSEAIQYVGKEVEV
Ga0310909_113663402	3300031947	Soil	VFGISDFAMRVGALFAILALLLCAIVAHADKPIVIKDSEAIRYVGK
Ga0306926_129526841	3300031954	Soil	MLIRLFIAIFVLLLCTIVARADKPIVIKDSEAMEYVGK
Ga0318531_104401891	3300031981	Soil	MRIRIFITILALLLCVIVARADEPTVIKDSEAIRHVGKEVEVRGRVVSVTTSPLGTAFI
Ga0306922_109371033	3300032001	Soil	MRIRLFIAILALLLCAIVARTGEPIVIKDSEAVKYVGK
Ga0306922_111207631	3300032001	Soil	MPIRLFIAMLALLLCVIAARADKPIVIKDSEAIQYVGKEAEVRGRVVSVTTSPLGTTFINFGG
Ga0306922_114841671	3300032001	Soil	MRIRLFVAILTLLLCAIAARGNEPIVIKDSEAILYVGKEVEVRGCVVCVTTSPLGTTFINFGG
Ga0306922_117081791	3300032001	Soil	MRILLFVAILALLLCAIVARTGEPIAIKDSEAIKYVGKEVEVRGRVVSVTTSPLGTTFINFGGDYPHQTF
Ga0318563_106650971	3300032009	Soil	MRIRFFIVIIALLLWAIAGRTGEPIVIKDSEAIEY
Ga0310911_105823361	3300032035	Soil	MRVGALFAILALLLCAIVAHADKPIVIKDSEAIRYVGKEVEVRGRVVAVTSPLG
Ga0310911_108833442	3300032035	Soil	MRIRLFIAILALLLCAIVARTGEPIVIKDSEAVKYVGKEAEVRG
Ga0318533_109461302	3300032059	Soil	MLIRLFIATLALLLCAIAARGDKPIVIKDSEAIQY
Ga0306924_100309507	3300032076	Soil	MGVRRLFAVLALLLCAVMIRADEPIVIKDSDAIKYVGKQVEVGGRVVSVITSPLGTAFINFGGEYPNQ
Ga0306924_116406922	3300032076	Soil	MLIRLFIAMLTLLLCAIAARADKPIVIKDSEAIQYVGKEAE
Ga0306924_119096542	3300032076	Soil	MRIGLLIVIIALLLSVMTARADKPTVIKDSEATQYVGKEVEVRGRVVSVTTSPL
Ga0306924_121773261	3300032076	Soil	MLIRLFIAILTLFLCVITLRADKPIVIKDSEAIQHVGKLSEV
Ga0306924_124529572	3300032076	Soil	MRIRLFIAILTLLLCAIAARTGEPIVIKDSEAIKYVGKEVEVRGRVVS
Ga0307471_1021915952	3300032180	Hardwood Forest Soil	MGIRPFFAILGLFLCAIVARADKPIVIKDSEAINYVGKEVEVRGRVVSVTTSPLGTAFINFGGEYPIRRLPGSSRPGPR
Ga0307472_1009365241	3300032205	Hardwood Forest Soil	MLTRLFIAMLALLFCAIAVRADKPIVIKDSEAIQYVGKEAEVRGRVVSVTTSPLGTTFI
Ga0306920_1005120472	3300032261	Soil	MGKRPFFAIIGLLLCAIAACADKPIVIKDSEAIHYVGKEVEV
Ga0306920_1005546261	3300032261	Soil	MAIRLLFAILGLLLCGIAARADKPIVIKDSEAIQYVGKEVE
Ga0306920_1016983211	3300032261	Soil	MRIRLFVAILTLLLCEIAAHGEKPIAIKDSEAIKYVGKEVEVRGRVVSVTTSPLGTTFINLPNQTFA
Ga0306920_1033135352	3300032261	Soil	MRIHLFIAILALLLCAIVARTDEPIVIKDSEAIKYVGKEAEVRGRVVSVTTSPLGTTFIN
Ga0306920_1042463711	3300032261	Soil	MLIRLFIAILALLLCVIMAHADKPIVIKDSEAMEYVGREVEVQGRVASVTTSPFGT
Ga0310914_108063611	3300033289	Soil	MRIRLFIAILTLLLCAIAARTGEPIVIKDSEAIKYVGKEVEVRGRVVSV
Ga0318519_107085381	3300033290	Soil	MQIRLFIAMLALVLCAIAAHADEPKVIKDSEAIRYVGKEVDVRGRVVSV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F053670

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences