Metagenome / Metatranscriptome Family F053646

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F053646
Family Type	Metagenome / Metatranscriptome
Number of Sequences	141
Average Sequence Length	85 residues
Representative Sequence	MKKRWILPGLLVAAFALAATGLADPGHGKGPGKGKHGKFGPYAVVTDDHGSCGNAWAVDTEKRTFTVHKNHDGSYTLLRRDR
Number of Associated Samples	123
Number of Associated Scaffolds	141

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	100.00 %
% of genes near scaffold ends (potentially truncated)	98.58 %
% of genes from short scaffolds (< 2000 bps)	94.33 %
Associated GOLD sequencing projects	117
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.28

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (97.872 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (18.440 % of family members)
Environment Ontology (ENVO)	Unclassified (28.369 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (51.064 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 10.91% β-sheet: 9.09% Coil/Unstructured: 80.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.28
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.28
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 141 Family Scaffolds
PF09844	DUF2071	20.57
PF00903	Glyoxalase	16.31
PF01243	Putative_PNPOx	7.80
PF13489	Methyltransf_23	4.26
PF14696	Glyoxalase_5	3.55
PF07690	MFS_1	1.42
PF13649	Methyltransf_25	1.42
PF13561	adh_short_C2	0.71
PF01545	Cation_efflux	0.71
PF07021	MetW	0.71

COG ID	Name	Functional Category	% Frequency in 141 Family Scaffolds
COG0053	Divalent metal cation (Fe/Co/Zn/Cd) efflux pump	Inorganic ion transport and metabolism [P]	0.71
COG1230	Co/Zn/Cd efflux system component	Inorganic ion transport and metabolism [P]	0.71
COG3965	Predicted Co/Zn/Cd cation transporter, cation efflux family	Inorganic ion transport and metabolism [P]	0.71

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.58 %
Unclassified	root	N/A	1.42 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	97.87 %
Unclassified	root	N/A	1.42 %
Viruses	superkingdom	All Organisms → Viruses	0.71 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	97.87 %
Unclassified	root	N/A	1.42 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.71 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	49.65 %
Unclassified	root	N/A	1.42 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.71 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	39.01 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	3.55 %
Unclassified	root	N/A	1.42 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.71 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	34.04 %
Unclassified	root	N/A	1.42 %
Thermomicrobia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia	0.71 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.71 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	28.37 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	2.13 %
Unclassified	root	N/A	1.42 %
Sphaerobacteridae	subclass	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae	0.71 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.71 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	28.37 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → environmental samples	2.13 %
Unclassified	root	N/A	1.42 %
Sphaerobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales	0.71 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.71 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	28.37 %
uncultured Corynebacteriales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → environmental samples → uncultured Corynebacteriales bacterium	2.13 %
Unclassified	root	N/A	1.42 %
Sphaerobacterineae	suborder	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales → Sphaerobacterineae	0.71 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.71 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	28.37 %
uncultured Corynebacteriales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → environmental samples → uncultured Corynebacteriales bacterium	2.13 %
Unclassified	root	N/A	1.42 %
Sphaerobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales → Sphaerobacterineae → Sphaerobacteraceae	0.71 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.71 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	28.37 %
uncultured Corynebacteriales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → environmental samples → uncultured Corynebacteriales bacterium	2.13 %
Unclassified	root	N/A	1.42 %
Nitrolancea	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales → Sphaerobacterineae → Sphaerobacteraceae → Nitrolancea	0.71 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.71 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	28.37 %
uncultured Corynebacteriales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → environmental samples → uncultured Corynebacteriales bacterium	2.13 %
Unclassified	root	N/A	1.42 %
Nitrolancea hollandica	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales → Sphaerobacterineae → Sphaerobacteraceae → Nitrolancea → Nitrolancea hollandica	0.71 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.71 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2199352025\|deepsgr__Contig_175469	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2497	Open in IMG/M
3300000956\|JGI10216J12902_104243140	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	965	Open in IMG/M
3300000956\|JGI10216J12902_106514075	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	536	Open in IMG/M
3300001431\|F14TB_100494676	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	522	Open in IMG/M
3300001534\|A15PFW1_10084823	All Organisms → cellular organisms → Bacteria → Terrabacteria group	863	Open in IMG/M
3300004153\|Ga0063455_100150225	All Organisms → cellular organisms → Bacteria	1068	Open in IMG/M
3300004153\|Ga0063455_101454180	All Organisms → cellular organisms → Bacteria	532	Open in IMG/M
3300004157\|Ga0062590_100647440	All Organisms → cellular organisms → Bacteria	940	Open in IMG/M
3300004479\|Ga0062595_100431569	All Organisms → cellular organisms → Bacteria	959	Open in IMG/M
3300004643\|Ga0062591_102154765	All Organisms → cellular organisms → Bacteria	579	Open in IMG/M
3300005187\|Ga0066675_10361828	All Organisms → cellular organisms → Bacteria	1063	Open in IMG/M
3300005187\|Ga0066675_10669458	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	780	Open in IMG/M
3300005328\|Ga0070676_10581745	All Organisms → cellular organisms → Bacteria	805	Open in IMG/M
3300005332\|Ga0066388_101635920	All Organisms → Viruses → Predicted Viral	1135	Open in IMG/M
3300005347\|Ga0070668_100366591	All Organisms → cellular organisms → Bacteria	1223	Open in IMG/M
3300005364\|Ga0070673_101116593	All Organisms → cellular organisms → Bacteria	737	Open in IMG/M
3300005440\|Ga0070705_100484140	All Organisms → cellular organisms → Bacteria	936	Open in IMG/M
3300005468\|Ga0070707_101003550	All Organisms → cellular organisms → Bacteria → Terrabacteria group	800	Open in IMG/M
3300005544\|Ga0070686_100975680	All Organisms → cellular organisms → Bacteria	694	Open in IMG/M
3300005545\|Ga0070695_101197849	All Organisms → cellular organisms → Bacteria	625	Open in IMG/M
3300005556\|Ga0066707_10980673	All Organisms → cellular organisms → Bacteria → Terrabacteria group	516	Open in IMG/M
3300005556\|Ga0066707_11027479	All Organisms → cellular organisms → Bacteria	502	Open in IMG/M
3300005843\|Ga0068860_101580069	All Organisms → cellular organisms → Bacteria	678	Open in IMG/M
3300005888\|Ga0075289_1090696	All Organisms → cellular organisms → Bacteria	512	Open in IMG/M
3300006046\|Ga0066652_100131145	All Organisms → cellular organisms → Bacteria	2074	Open in IMG/M
3300006058\|Ga0075432_10358573	All Organisms → cellular organisms → Bacteria	620	Open in IMG/M
3300006755\|Ga0079222_10229423	All Organisms → cellular organisms → Bacteria	1147	Open in IMG/M
3300006845\|Ga0075421_101571705	All Organisms → cellular organisms → Bacteria	716	Open in IMG/M
3300006852\|Ga0075433_11124433	All Organisms → cellular organisms → Bacteria	683	Open in IMG/M
3300006904\|Ga0075424_101671482	All Organisms → cellular organisms → Bacteria	674	Open in IMG/M
3300006954\|Ga0079219_11826089	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	570	Open in IMG/M
3300006969\|Ga0075419_10690640	All Organisms → cellular organisms → Bacteria	723	Open in IMG/M
3300007076\|Ga0075435_101191048	All Organisms → cellular organisms → Bacteria	666	Open in IMG/M
3300007076\|Ga0075435_101197877	All Organisms → cellular organisms → Bacteria	664	Open in IMG/M
3300007076\|Ga0075435_101240515	All Organisms → cellular organisms → Bacteria	652	Open in IMG/M
3300009093\|Ga0105240_10873921	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	969	Open in IMG/M
3300009094\|Ga0111539_10475596	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1455	Open in IMG/M
3300009094\|Ga0111539_12335929	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	620	Open in IMG/M
3300009094\|Ga0111539_12359318	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	617	Open in IMG/M
3300009148\|Ga0105243_10623099	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1042	Open in IMG/M
3300009156\|Ga0111538_12504992	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	647	Open in IMG/M
3300009156\|Ga0111538_13686028	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	531	Open in IMG/M
3300009162\|Ga0075423_11666380	All Organisms → cellular organisms → Bacteria	686	Open in IMG/M
3300009162\|Ga0075423_11696145	All Organisms → cellular organisms → Bacteria	680	Open in IMG/M
3300009174\|Ga0105241_10765734	All Organisms → cellular organisms → Bacteria	886	Open in IMG/M
3300009176\|Ga0105242_10683475	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1002	Open in IMG/M
3300009840\|Ga0126313_11521682	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	556	Open in IMG/M
3300010122\|Ga0127488_1041970	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	517	Open in IMG/M
3300010303\|Ga0134082_10181717	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	857	Open in IMG/M
3300010333\|Ga0134080_10547383	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	556	Open in IMG/M
3300010335\|Ga0134063_10553291	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	581	Open in IMG/M
3300010360\|Ga0126372_11279052	All Organisms → cellular organisms → Bacteria → Terrabacteria group	761	Open in IMG/M
3300010373\|Ga0134128_10780626	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1059	Open in IMG/M
3300012003\|Ga0120163_1117833	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	571	Open in IMG/M
3300012199\|Ga0137383_10881173	All Organisms → cellular organisms → Bacteria → Terrabacteria group	653	Open in IMG/M
3300012201\|Ga0137365_10595895	All Organisms → cellular organisms → Bacteria	810	Open in IMG/M
3300012353\|Ga0137367_11096322	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	538	Open in IMG/M
3300012475\|Ga0157317_1019990	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	589	Open in IMG/M
3300012884\|Ga0157300_1028853	All Organisms → cellular organisms → Bacteria	779	Open in IMG/M
3300012891\|Ga0157305_10006293	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1720	Open in IMG/M
3300012906\|Ga0157295_10003619	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2330	Open in IMG/M
3300012915\|Ga0157302_10095766	All Organisms → cellular organisms → Bacteria	928	Open in IMG/M
3300012948\|Ga0126375_10599511	All Organisms → cellular organisms → Bacteria	841	Open in IMG/M
3300012948\|Ga0126375_11386079	All Organisms → cellular organisms → Bacteria	595	Open in IMG/M
3300012951\|Ga0164300_11193549	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	504	Open in IMG/M
3300012955\|Ga0164298_10336826	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	950	Open in IMG/M
3300012958\|Ga0164299_10590229	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	757	Open in IMG/M
3300012961\|Ga0164302_11132878	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	620	Open in IMG/M
3300012977\|Ga0134087_10293591	All Organisms → cellular organisms → Bacteria	759	Open in IMG/M
3300012987\|Ga0164307_11053150	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	665	Open in IMG/M
3300013104\|Ga0157370_12114094	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	504	Open in IMG/M
3300013297\|Ga0157378_13187075	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	509	Open in IMG/M
3300013306\|Ga0163162_10115187	All Organisms → cellular organisms → Bacteria	2788	Open in IMG/M
3300014058\|Ga0120149_1231473	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales → Sphaerobacterineae → Sphaerobacteraceae → Nitrolancea → Nitrolancea hollandica	518	Open in IMG/M
3300014823\|Ga0120170_1079259	All Organisms → cellular organisms → Bacteria	684	Open in IMG/M
3300014968\|Ga0157379_11863851	All Organisms → cellular organisms → Bacteria	592	Open in IMG/M
3300014969\|Ga0157376_11710770	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	664	Open in IMG/M
3300014969\|Ga0157376_11839300	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	642	Open in IMG/M
3300015374\|Ga0132255_102096654	All Organisms → cellular organisms → Bacteria	861	Open in IMG/M
3300017792\|Ga0163161_10843247	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	773	Open in IMG/M
3300018051\|Ga0184620_10252899	Not Available	591	Open in IMG/M
3300018071\|Ga0184618_10183260	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → environmental samples → uncultured Corynebacteriales bacterium	869	Open in IMG/M
3300018431\|Ga0066655_11404206	All Organisms → cellular organisms → Bacteria	507	Open in IMG/M
3300018433\|Ga0066667_11417820	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	611	Open in IMG/M
3300019875\|Ga0193701_1056189	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → environmental samples → uncultured Corynebacteriales bacterium	791	Open in IMG/M
3300021078\|Ga0210381_10170749	All Organisms → cellular organisms → Bacteria	747	Open in IMG/M
3300021080\|Ga0210382_10057550	All Organisms → cellular organisms → Bacteria	1544	Open in IMG/M
3300022756\|Ga0222622_10056355	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2245	Open in IMG/M
3300023067\|Ga0247743_1020817	All Organisms → cellular organisms → Bacteria	853	Open in IMG/M
3300023069\|Ga0247751_1023401	All Organisms → cellular organisms → Bacteria	974	Open in IMG/M
3300023071\|Ga0247752_1027173	All Organisms → cellular organisms → Bacteria	835	Open in IMG/M
3300024055\|Ga0247794_10218371	All Organisms → cellular organisms → Bacteria	620	Open in IMG/M
3300024246\|Ga0247680_1049907	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	608	Open in IMG/M
3300024275\|Ga0247674_1000185	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6200	Open in IMG/M
3300024310\|Ga0247681_1040557	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	703	Open in IMG/M
3300024325\|Ga0247678_1046915	All Organisms → cellular organisms → Bacteria	695	Open in IMG/M
3300025913\|Ga0207695_10610119	All Organisms → cellular organisms → Bacteria	972	Open in IMG/M
3300025917\|Ga0207660_11465271	All Organisms → cellular organisms → Bacteria	552	Open in IMG/M
3300025918\|Ga0207662_11313001	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	514	Open in IMG/M
3300025921\|Ga0207652_11526139	All Organisms → cellular organisms → Bacteria	572	Open in IMG/M
3300025922\|Ga0207646_11942504	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	501	Open in IMG/M
3300025925\|Ga0207650_11168624	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	655	Open in IMG/M
3300025935\|Ga0207709_10872448	All Organisms → cellular organisms → Bacteria	730	Open in IMG/M
3300025935\|Ga0207709_11074651	All Organisms → cellular organisms → Bacteria → Terrabacteria group	660	Open in IMG/M
3300025942\|Ga0207689_10849193	All Organisms → cellular organisms → Bacteria	770	Open in IMG/M
3300025960\|Ga0207651_12152844	All Organisms → cellular organisms → Bacteria	501	Open in IMG/M
3300025960\|Ga0207651_12156708	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	500	Open in IMG/M
3300026663\|Ga0207532_100905	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	552	Open in IMG/M
3300026827\|Ga0207591_105380	All Organisms → cellular organisms → Bacteria	618	Open in IMG/M
3300026828\|Ga0207502_105513	Not Available	631	Open in IMG/M
3300027821\|Ga0209811_10027918	All Organisms → cellular organisms → Bacteria	1870	Open in IMG/M
3300027909\|Ga0209382_11817711	All Organisms → cellular organisms → Bacteria	592	Open in IMG/M
3300028281\|Ga0247689_1052821	All Organisms → cellular organisms → Bacteria	573	Open in IMG/M
3300028589\|Ga0247818_10739131	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	684	Open in IMG/M
3300028704\|Ga0307321_1014524	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → environmental samples → uncultured Corynebacteriales bacterium	1353	Open in IMG/M
3300028708\|Ga0307295_10053373	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1046	Open in IMG/M
3300028718\|Ga0307307_10129410	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	781	Open in IMG/M
3300028718\|Ga0307307_10168668	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	687	Open in IMG/M
3300028722\|Ga0307319_10012090	All Organisms → cellular organisms → Bacteria	2632	Open in IMG/M
3300028722\|Ga0307319_10176714	All Organisms → cellular organisms → Bacteria	696	Open in IMG/M
3300028768\|Ga0307280_10120184	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	888	Open in IMG/M
3300028782\|Ga0307306_10015944	All Organisms → cellular organisms → Bacteria	1661	Open in IMG/M
3300028787\|Ga0307323_10004669	All Organisms → cellular organisms → Bacteria	4449	Open in IMG/M
3300028787\|Ga0307323_10170868	All Organisms → cellular organisms → Bacteria → Terrabacteria group	785	Open in IMG/M
3300028799\|Ga0307284_10167190	All Organisms → cellular organisms → Bacteria	854	Open in IMG/M
3300028799\|Ga0307284_10492217	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	503	Open in IMG/M
3300028811\|Ga0307292_10344157	All Organisms → cellular organisms → Bacteria → Terrabacteria group	629	Open in IMG/M
3300028812\|Ga0247825_11181994	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	558	Open in IMG/M
3300028878\|Ga0307278_10117867	All Organisms → cellular organisms → Bacteria	1192	Open in IMG/M
3300028885\|Ga0307304_10342072	All Organisms → cellular organisms → Bacteria	667	Open in IMG/M
3300030336\|Ga0247826_11594515	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	531	Open in IMG/M
3300031093\|Ga0308197_10318952	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	580	Open in IMG/M
3300031547\|Ga0310887_10380684	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	826	Open in IMG/M
3300031740\|Ga0307468_102256829	All Organisms → cellular organisms → Bacteria	528	Open in IMG/M
3300031852\|Ga0307410_11280329	All Organisms → cellular organisms → Bacteria	641	Open in IMG/M
3300031903\|Ga0307407_11546694	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	525	Open in IMG/M
3300031940\|Ga0310901_10273473	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	701	Open in IMG/M
3300031995\|Ga0307409_100196652	All Organisms → cellular organisms → Bacteria	1800	Open in IMG/M
3300031996\|Ga0308176_10773833	All Organisms → cellular organisms → Bacteria	1001	Open in IMG/M
3300032002\|Ga0307416_103863118	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	502	Open in IMG/M
3300032074\|Ga0308173_11801536	All Organisms → cellular organisms → Bacteria	577	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	68.79%
Host-Associated	Host-Associated	31.21%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	65.25%
Plants	Host-Associated → Plants	31.21%
Aquatic	Environmental → Aquatic	3.55%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	65.25%
Rhizosphere	Host-Associated → Plants → Rhizosphere	26.95%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.26%
Sediment	Environmental → Aquatic → Sediment	2.13%
Freshwater	Environmental → Aquatic → Freshwater	1.42%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	56.03%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	22.70%
Loam	Environmental → Terrestrial → Soil → Loam	8.51%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.26%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.55%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.13%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.42%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.71%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.71%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	29.08%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	22.70%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	8.51%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.38%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.67%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	4.96%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	4.26%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.26%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.55%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	2.84%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.13%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.13%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.42%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.71%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.71%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.71%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	18.44%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	11.35%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	4.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	4.26%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	3.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.55%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	3.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.84%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	2.84%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.84%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	2.84%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.84%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.13%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.13%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.13%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.13%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.13%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.42%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.42%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.42%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.42%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.42%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.42%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.42%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.71%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.71%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.71%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.71%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.71%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.71%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.71%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.71%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.71%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.71%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.71%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.71%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.71%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.71%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2199352025	Soil microbial communities from Rothamsted, UK, for project Deep Soil - DEEP SOIL	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300001534	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A15-PF-7A)- 1 week illumina	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005888	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_103	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006058	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1	Host-Associated	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010122	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_2_4_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300012003	Permafrost microbial communities from Nunavut, Canada - A20_80cm_0.25M	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012475	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.10.old.080610	Host-Associated	Open in IMG/M
3300012884	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2	Environmental	Open in IMG/M
3300012891	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S148-409B-2	Environmental	Open in IMG/M
3300012906	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S212-509R-1	Environmental	Open in IMG/M
3300012915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300013104	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014058	Permafrost microbial communities from Nunavut, Canada - A3_65cm_0.25M	Environmental	Open in IMG/M
3300014823	Permafrost microbial communities from Nunavut, Canada - A3_80cm_0M	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018051	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300019875	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3s2	Environmental	Open in IMG/M
3300021078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redo	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300023067	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S221-509R-5	Environmental	Open in IMG/M
3300023069	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S049-202B-5	Environmental	Open in IMG/M
3300023071	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S019-104C-5	Environmental	Open in IMG/M
3300024055	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S046-202B-6	Environmental	Open in IMG/M
3300024246	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK21	Environmental	Open in IMG/M
3300024275	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK15	Environmental	Open in IMG/M
3300024310	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK22	Environmental	Open in IMG/M
3300024325	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK19	Environmental	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026663	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-HINK07-B (SPAdes)	Environmental	Open in IMG/M
3300026827	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G09A4-11 (SPAdes)	Environmental	Open in IMG/M
3300026828	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G08A5-12 (SPAdes)	Environmental	Open in IMG/M
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028281	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK30	Environmental	Open in IMG/M
3300028589	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day1	Environmental	Open in IMG/M
3300028704	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_379	Environmental	Open in IMG/M
3300028708	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_152	Environmental	Open in IMG/M
3300028718	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194	Environmental	Open in IMG/M
3300028722	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368	Environmental	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300028782	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_193	Environmental	Open in IMG/M
3300028787	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381	Environmental	Open in IMG/M
3300028799	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028812	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300031093	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_198 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031852	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3	Host-Associated	Open in IMG/M
3300031903	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1	Host-Associated	Open in IMG/M
3300031940	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D2	Environmental	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032074	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
deepsgr_02975840	2199352025	Soil	MKKRWILPGLLVAAFALAATGLADPGHGKGKGHGKQGKFGPYAVVTDDHGSCGNAWAVDTEKRSFTVHKNQDGSYTLLRRDRGTFPDERRPEPGRV
JGI10216J12902_1042431401	3300000956	Soil	MKKRWIVPTLLVAALALAATAAAGSGHGEGKGHHGKFGPYNVVTDDHGSCANAWAVDTEKRTFKVRRNDDGSYTLTRYDRGTFLTNAGQSPGACNPKGKH
JGI10216J12902_1065140751	3300000956	Soil	MQKRWIIPGLLAAAFALAATGLAANGNHGNGHGKKFGPYDVVTDDHGSCGNAWATDTEKRRFSVHKNADGTYRLIRFDRG
F14TB_1004946762	3300001431	Soil	MKKRWILPGLLVAAFAIAATGLADPGHGKGKGSGHGKGKGLTSKFGPYDVVTDDHGSCGNTWAVDTEKRXFKVRQNKNGSFTLTRTDRGTFLTSAGQSPGACE
A15PFW1_100848232	3300001534	Permafrost	MKKRWILPGLLVAAFALAATGLADPGHGKGHGHGKNHNKFGPYDVVTDDNGTCGNAWAVDTEKRTFT
Ga0063455_1001502251	3300004153	Soil	MKKRLIIPGLLTAAFVFAATGLANNGHGNRHNGKFGPYDVVTDDNGSCGNPWAVDTEKRIFKVKRNHDGTFRLTRYDRGRFL
Ga0063455_1014541801	3300004153	Soil	MKKYWILPVLLLAALALAATGLADPGHGKSRGHGKHSKLGPYTVVTDDNGTCENPWAVDTSKRTFTVHRNRDGSYTLLRRDRGTFTTN
Ga0062590_1006474402	3300004157	Soil	MKKRWIVPGLLVAAFALAATGFADPGHGKGKGQGHGKDHAKSQGKGKGKGQKMKFGPYDVVTDDHGSCGNTWAVDTEKRTFKVRQNK
Ga0062595_1004315692	3300004479	Soil	MQKRWIIPGLLAAAFAFAATGLANNGHGHGNGHGKKFGPYNVVTDDHGSCGNAWAVDTELRTYRVKRNRDGTFRLWRRDRG
Ga0062591_1021547652	3300004643	Soil	MKKRWILPGLLVAAFALAATGLADPGHGKGKGHGKQGKFGPYAVVTDDHGSCGNAWAVDTEQRTFTVHKNHDGSFTLLRRDRGTFLTNAGQSPGA
Ga0066675_103618281	3300005187	Soil	MQKRWIIPGLLAATFAFATTGLANNGHGNGGHHSLKFGPYDVVTDDPGSCGNTWAVLTEKRVY
Ga0066675_106694582	3300005187	Soil	MQKRWIIPGLLAAAFVLAATGLAANGNHGNGHGKKFGPFTVVTDDHGSCGQAHSWAVDTEKRRFSIKKNDDGTYRLIRRDRGTFLTNAGESPGACETKGKH
Ga0070676_105817452	3300005328	Miscanthus Rhizosphere	MKKRWIVPGLLVAAFALAATGLADPGHGKGKGQGHGKKSKFGPYDVVTDDHGSCGNTWAVDTAKRTFKVKQNKDGTFTVTRTDRGTFVTS
Ga0066388_1016359202	3300005332	Tropical Forest Soil	MKKRWIVPTLFVAALAFTATGVAGGPGHGNGKGKGKAHHGKFGPYDVVTDDHGSCSNAWAVDTEKRTFKVRRNND
Ga0070668_1003665911	3300005347	Switchgrass Rhizosphere	MKKRWILPGLLVAAFALAATGLADPGHGKGPGKGKHGKFGPYAVVTDDHGSCGNAWAVDTEKRTFTVHKNHDGSYTLLRRDRGTFLTNAGQSP
Ga0070673_1011165932	3300005364	Switchgrass Rhizosphere	MKKRWILPGLLTAALALAATGTADPGHGKGKSHHGKFGPYDVVTDDHGSCGNAWAVDTEKRTFKVRRNGDGSYT
Ga0070705_1004841401	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MKKRWIIPGLIVAALALAASGLADPGHGKGKGKSHHGKFGPYDVVTDDHGSCGNAWAVDTEKRTFKVRRNG
Ga0070707_1010035502	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MKKRWIIPGLLAAALAFAAAGLAKNHPGHGNGHQKKFGPYGVVTDDHGSCGNAWASDTELRTFTVKRNKDGTFRLTRRDHGAFLT
Ga0070686_1009756801	3300005544	Switchgrass Rhizosphere	MKKRWILPGLLVAAFALAATGLADPGHGKGPGKGKHGKFGPYAVVTDDHGSCGNAWAVDTEKRTF
Ga0070695_1011978491	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MTKRLILPALLLAALALAATAAAGSGQGKGKGKGHGHHGKFGPYDVVTDDHGSCSNAWAVDTEKRTFKVRRNNDGSYTLT
Ga0066707_109806732	3300005556	Soil	MQKRWIIPGLLAAALALTATSAATPGHGQGKGHSKKFGPYAVVTDDHGSCGNKWATDTENRSFKVRHNQDGS
Ga0066707_110274791	3300005556	Soil	MQKRWIIPGLLAAAFALAATGLAATGNQGNGHGKKFGPYDVVTDDHGSCGNAWAVDTEKRSFSIKNNHDG
Ga0068860_1015800691	3300005843	Switchgrass Rhizosphere	MKKRWILPGLLVAAFALAATGLADPGHGKGPGKGKHGKFGPYAVVTDDHGSCGNAWAVDTEKRTFTVHKNHDGSYTLLRRDRGTFLTNAGQSPGACETTKH
Ga0075289_10906962	3300005888	Rice Paddy Soil	MKKRWILPGLLVAAFALAATGLADPGHGKGPGHGKGHGKHGKFGPYDVVTDDHGSCGNAWALDTEKRSFTVHRNHDGSYTLLRRDRGTFLT
Ga0066652_1001311455	3300006046	Soil	MQKRWIIPGLLAAAFVLAATGLAANGNHGNGHGKKFGPFTVVTDDHGSCGQAHAWAVDTEKRSFSVKNNHD
Ga0075432_103585731	3300006058	Populus Rhizosphere	MTKRLILPALLLAALALAATAAAGSGQGKGKGKGHGHHGKFGPYDVVTDDHGSCSNAWAVDTEKRTFKVRRNNDGSYTLTRYDRG
Ga0079222_102294232	3300006755	Agricultural Soil	MKKRWIIPGLIVAALALAASGLADPGHGKGKGKSHHGKFGPYDVVTDDHGSCGNAWAVDTEKRTFKVRRNGDGSYTLTRYDRGTFVTTAGPSPGACETKGK
Ga0075421_1015717052	3300006845	Populus Rhizosphere	MTKRLILPALLLAALALAATAAAGSGQGKGKGKGHGHHGKFGPYDVVTDDHGSCSNAWAVDTEKRTFKVRRNNDGSYTLTR
Ga0075433_111244332	3300006852	Populus Rhizosphere	MKKRWIVPGLLVAAFALAATGFADPGHGKGKGQGHGKDHAKTQGKGKGKGKGQKMKFGPYDVVTDDHGSCGNTWAV
Ga0075424_1016714821	3300006904	Populus Rhizosphere	MKKRWIVPTLFVAALAFTATGVAGGPGHGKGKGHHGKFGPYDVVTDDHGSCSNAWAVDTEKRTFKVR
Ga0079219_118260892	3300006954	Agricultural Soil	MKKRWILPGLLVAACAFVASGAADPGHGQGKGHTKGKHGKLGPYDVVTDDHGSCSNAWAVDTEKRTFRVHK
Ga0075419_106906402	3300006969	Populus Rhizosphere	MKKRWIVPTLFVAALAFTATGVAGGPGHGKGKGHHGKFGPYDVVTDDHGSCSNAWAVDTEKRTFKVRRNNDGSYTLTRYDRGTFLTNAGQSPGACNPKGKHGATVNAGVKG
Ga0075435_1011910481	3300007076	Populus Rhizosphere	MKKRWIVPTLFVAALAFTATGVAGGPGHGKGKGKGHHGKFGPYDVVTDDHGSCSNAWAVDTEKRTFKVRRN
Ga0075435_1011978771	3300007076	Populus Rhizosphere	MKKRWIVPTLFVAALAFTATGVAGGPGHGKGKGHHGKFGPYDVVTDDHGSCSNAWAVDTEKRTFKVRRN
Ga0075435_1012405152	3300007076	Populus Rhizosphere	MTKRLILPALLLAALALAATAAAGSGQGKGKGKGHGHHGKFGPYDVVTDDHGSCSNAWAVDTEKRTFKVRRNNDGSYTLTRYDRGTFLTNAG
Ga0105240_108739212	3300009093	Corn Rhizosphere	MKKRWIVPGLLVAAFALAATGLADPGHGKGKGQGHGKKSKFGPYDVVTDDHGSCGNTWAVDTEKRTFKVKQNKDGTFTVTRTDRGTFVTSAGQSPGACETKG
Ga0111539_104755961	3300009094	Populus Rhizosphere	MKKRWIVPTLFVAALAFTATGVAGGPGHGKGKGHHGKFGPYDVVTDDHGSCSNAWAVDTEKRTFKVRRNNDGSYTLTRYDRGTFLTNAGQSP
Ga0111539_123359291	3300009094	Populus Rhizosphere	MKKRWIVPTLFVAALAFTATGVAGGPGHGKGKGKGHHGKFGPYDVVTDDHGSCSNAWAVDTEKRTFKVRRNNDGSYTLTRYDRGT
Ga0111539_123593181	3300009094	Populus Rhizosphere	MTKRLILPALLLAALALAATAAAGSGQGKGKGKGHGHHGKFGPYDVVTDDHGSCSNAWAVDTEKRTFKVRRNNDGSYTLTRYDRGT
Ga0105243_106230993	3300009148	Miscanthus Rhizosphere	MKKRWILPGLLVAAFALAATGLADPGHGKGPGKGKHGKFGPYAVVTDDHGFFFFTYTADTEKRTFTVHKNHDGSYTLLRRD
Ga0111538_125049922	3300009156	Populus Rhizosphere	MKKRWIVPGLLVAAFALAATGFADPGHGKGKGQGKEHVKAQGKGKGKGKGQTSKFGPYDVVTDDHGSCGNTWAVDTEKRTFKVRQNKDGSFTLTRTDRGTFLTSAGQSPGACETKGKH
Ga0111538_136860281	3300009156	Populus Rhizosphere	MKKRWIVPGLLVAAFALAATGFADPGHGKGKGQGHGKDHAKSQGKGKGKGKGQKMKFGPYDVVTDDHGSCGNTWAVDTEKRTFKVRQNKDGSFTLTRTDRGTF
Ga0075423_116663802	3300009162	Populus Rhizosphere	MKKRWIVPTLFVAALAFTATGVAGGPGHGKGKGHHGKFGPYDVVTDDHGSCSNAWAVDTEKRTFKVRRNN
Ga0075423_116961452	3300009162	Populus Rhizosphere	MKKRWIVPTLFVAALAFTATGVAGGPGHGKGKGKGHHGKFGPYDVVTDDHGSCSNAWAVDTEKRTFKVRRNN
Ga0105241_107657342	3300009174	Corn Rhizosphere	MKKRWIIPGLIVAALALAASGLADPGHGKGKGKSHHGKFGPYDVVTDDHGSCGNAWAVDTEKRTFKVRRNGDGSYTLTRYDRGTFVTTAGPSPGACE
Ga0105242_106834753	3300009176	Miscanthus Rhizosphere	MKKRWILPGLLVAAFALAATGLADPGHGKGPGKGKHGKFGPYAVVTDDHGSCGNAWAVDTEKRTFTVHKNHDGSYTLLRRDRGAFLTN
Ga0126313_115216821	3300009840	Serpentine Soil	MKQRWILPSLLVAAFAFAATGLAGPGHGPGQKSKFGPYAVVTDDTGTCHNAWAVDTQRRTFKVKRNRNGSFRLTRTDLGT
Ga0127488_10419701	3300010122	Grasslands Soil	MQKRWIVPGLLAAAFAFAATGLANNGNGHGSGHGKKFGPYGVVTDDHGSCANAWAVDTELRTFTVKRNRDGTF
Ga0134082_101817171	3300010303	Grasslands Soil	MQKRWIIPGLLAATFAFAATGLANNGHGNGGHHSLKFGPYDVVTDDPGSCGNTWAVLTEKRVYKVKRNRDGTFRLIRRDHGTF
Ga0134080_105473832	3300010333	Grasslands Soil	MQKRWIIPGLLAAAFALAATGLAATGSHGNGHGKKFGQYNVVTDDHGSCGNAWAVDTELRTYTVKRNRDGTFRLWRRDR
Ga0134063_105532911	3300010335	Grasslands Soil	MQKRWIIPGLLAAAFVLAATGLAANGNHGNGHGKKFGPFTVVTDDHGSCGQAHAWAVDTEKRRFSIKKNDD
Ga0126372_112790521	3300010360	Tropical Forest Soil	MKKRWILPGLLVAAAALAASGTAGTGHGHGAGHSKGKHGRFGPYDVVTDDGGTCGNAWAVDTEKRTFSVHKNRDGSYTV
Ga0134128_107806263	3300010373	Terrestrial Soil	MQKRWIIPGLLAAAFAFAATGLANNGHGHGNGHGKKFGPYNVVTDDHGSCGNAWALDTELRTYTVKRNRDGTFRLWRRDRGTFLTNEGPSPGACETHG
Ga0120163_11178332	3300012003	Permafrost	MKKRWILPGLLVAAFALAATGLADPGHGKGHGHGKNHNKFGPYDVVTDDNGTCGNAWAVDTEKRTFTVKS
Ga0137383_108811732	3300012199	Vadose Zone Soil	MKKRWIIPGLLAATLALAATSAATPGHGQGKGKGHNKKFGPYAVVTDDHGSCGNKWATDTENRSFKVRH
Ga0137365_105958952	3300012201	Vadose Zone Soil	MQKRWIIPGLLAAAFALAATGLAATGNHGTGHGKKFGPYDVVTDDHGSCGNAWAVDTEKRSFSVKKNADGTYRLIRRDRGTFLTNAGQSPGACE
Ga0137367_110963222	3300012353	Vadose Zone Soil	MQKRWIVPGLLAAAFAFAATGLANNGNGHGKKFGPYGVVTDDHGSCGPAHAWAVDTELRTFTVKRNRDGTFRLTRRDHGAFLTNEGQSPGACETHGR
Ga0157317_10199902	3300012475	Arabidopsis Rhizosphere	MKKRWILPALFLAALALAATAAAGAGQGKGKGHGHHGKFGPYDVVTDDHGSCSNAWAVDTEKRTFKVRRNNDGSY
Ga0157300_10288532	3300012884	Soil	MTKRLILPALLLAALALAATAAAGSGQGKGKGKGHGQHGKFGPYDVVTDDHGSCSNAWAVDTEKRTFKVRRNNDGSYTLTRYDRGTFLTNAGQSPGACNPKGKHGATVNAGVKGKF
Ga0157305_100062933	3300012891	Soil	MTKRLILPALLLAALALAATAAAGSGQGKGKGKGHGQHGKFGPYDVVTDDHGSCSNAWAVDTEKRTFKVRRNN
Ga0157295_100036191	3300012906	Soil	MTKRLILPALLLAALALAATAAAGSGQGKGKGKGHGQHGKFGPYDVVTDDHGSCSNAWSVDTE
Ga0157302_100957662	3300012915	Soil	MTKRLILPALLLAALALAATAAAGSGQGKGKGKGHGQHGKFGPYDVVTDDHGSCSNAWAVDTEKRTF
Ga0126375_105995112	3300012948	Tropical Forest Soil	MKKRWIVPTLFVAALAFTATGVAGGPGHGNGKGKGKAHHGKFGPYDVVTDDNGSCGSPWAVDTVKRTFKVRHNNDGSYTLTRYDRGTFLTNAAQSPGACNPKGKHGATVNAGVK
Ga0126375_113860791	3300012948	Tropical Forest Soil	MKKRWILPVLFLAALALAATAAAGAGQGKGKGKGKGHHGKFGPYDVVADDHGSCSNAWAVDTEKRTFKVRRNNDGSYTLTRHDRGTFLTNAGQSPGACNPK
Ga0164300_111935492	3300012951	Soil	MKKRWILPGLLVAAFALAATGLADPGHGKGPGKGKHGKFGPYAVVTDDHGSCGNAWAVDTEKRTFTVHKNHDGSYTLLRRDR
Ga0164298_103368263	3300012955	Soil	MKKRWILPGLLVAAFALAATGLADPGHGKGPGKGKHGKFGPYAVVTDDHGSCGNAWAVDTEKRTFTVHKNHDGSYTLLRRDRGTFLT
Ga0164299_105902291	3300012958	Soil	MKKRLIVPGLLLAALAFAATGLADPGHGHGNGHGKHGKFGPYDVVTDDHGLCFFKGAAATEKRTFTVHKNHDGSYTLLRRDRGTFLTNAGQSPGACETTSTTARRSSPA*
Ga0164302_111328781	3300012961	Soil	MKKRWILPGLLVAAFALAATGLADPGHGKGPGKGKHGKFGPYAVVTDDHGSCGNAWAVDTEKRTFTVHKNH
Ga0134087_102935911	3300012977	Grasslands Soil	MQKRWIVPGLLAAAFAFAATGLANSGNGHGKKFGPYGVVTDDHGSCGPAHAWAVDTELRTFTVKRNRDGTFRLTRR
Ga0164307_110531501	3300012987	Soil	MKKRWILPGLLVAAFALAATGLADPGHGKGKGHGKQGKFGPYAVVTDDHGSCGNAWAVDTEKRTFTVHKNMDGSFTLLRRDRGTFLTNAGQSP
Ga0157370_121140941	3300013104	Corn Rhizosphere	MKKRWIIPGLIVAALALAASGLADPGHGKGKGKSHHGKFGPYNVVTDDHGSCGNAWAVDTEKRTYRVTRNHDGSYTLLRR
Ga0157378_131870752	3300013297	Miscanthus Rhizosphere	MKKRWILPGLLVAAFALAATGLADPGHGKGKGPGHGKGQGHGKKMKFGPYDVVTDDHGSCGNTWAVDTEKRKFKVKQNKDGTFTVTRTDRGTFLTQDG
Ga0163162_101151874	3300013306	Switchgrass Rhizosphere	MKKRWIVPGLLVAAFALAATGLADPGHGKGKGQGHGKKSKFGPYDVVTDDHGSCGNTWAVDTEKRTI
Ga0120149_12314731	3300014058	Permafrost	MKKRWILPGLLVAVFALAATGLANPGHGNNGKKKFGPYDVVTDDNGSCGVTAWAVDTEKRTFTVKRNHDGSYRVTRHDRGTFLTNAGQSPGACETKGKHGATVLP
Ga0120170_10792591	3300014823	Permafrost	MKKRWILPGLLVAVFALAATGLADPGHGNNGKKKFGPYDVVTDDNGSCGVTAWAVDTEKRTFTVKRNHDGSYRVTRHDRGTFLTNAGQSPGACETKGKHGAT
Ga0157379_118638511	3300014968	Switchgrass Rhizosphere	MKKRLILPGLLLAALALAATGLADPGHGTGHGKHGKFGPYDVVTDDHGSCGNAWAVDTEKRTFSVHKNRDGSYTLLRMDRGTFLTNAGQSPGACETKG
Ga0157376_117107702	3300014969	Miscanthus Rhizosphere	MKKRLILPGLLLAALALAATGLADPGHGTGHGKHGKFGPYDVVTDDHGSCSNAWAVDTEKRTFSVHKN
Ga0157376_118393001	3300014969	Miscanthus Rhizosphere	MKKRWILPGLLVAAFALAASGLADPGHGKGPGKGKHGKFGPYAVVTDDHGSCGNAWAVDTEKRTFTVHKNHDGSYTLLRRDRGTF
Ga0132255_1020966542	3300015374	Arabidopsis Rhizosphere	MKKRWIVPTLLVAALALAATAAAGSGHGKGKGKGHHGKFGPYDVVTDDHGSCANAWAVDTEKRTFKVRRNNDGSYTLTRVDRGTFLTN
Ga0163161_108432471	3300017792	Switchgrass Rhizosphere	MKKRWILPGLLVAAFALAATGLADPGHGKGPGKGKHGKFGPYAVVTDDHGSCGNAWAVDTEKRTFTVHKNHDGSYTLLRRDRGTFLTNAGQSPGACETTKHH
Ga0184620_102528991	3300018051	Groundwater Sediment	MKRWILPGLLVAAFALAATGLADPGHGKNTKKKFGPYDVVTDDNGSCGVTAWAVDTEKRTFKVKRNSDG
Ga0184618_101832601	3300018071	Groundwater Sediment	MKKRWILPGLLVAAFALAATGLADPGHGKNTKKKFGPYDVVTDDNGSCGVTAWAVDTEKRTFTVKRNHDGSYRVTRHDR
Ga0066655_114042061	3300018431	Grasslands Soil	MKRWIIPGLLVAVFAFAATGLADPGLGKGKGKPKAHGKYGPYDVVTDDHGSCGNPWAVDTEKRTFQVKKNKDGSYRLTRRDRGTF
Ga0066667_114178201	3300018433	Grasslands Soil	MKKYWILPGLLLAALALAATGLADPGHGKGKGHGTHGKLGPYDVVTDDNGTCQNPWAVDTEKRSFTVHRNHDGSY
Ga0193701_10561891	3300019875	Soil	MKRWILPGLLVAAFALAATGLADPGHGKNTKKKFGPYDVVTDDNGSCGVTAWAVDTEKRTFKVKRNSD
Ga0210381_101707491	3300021078	Groundwater Sediment	MKKRWILPGLLVAAFALAATGLADPGHGKGKGPGHGKGQGHGKKMKFGPYDVVTDDHGSCGNTWAVDTEKRTFKVKQNKDGTFTVTRTDRGTFVTSAGQSPGACE
Ga0210382_100575501	3300021080	Groundwater Sediment	MKKRWILPGLLVAAFALAATGLATPGQGKGKGQGHGKKSKFGPYDVVTDDGGSCGVDNPWAVDTEKRTF
Ga0222622_100563554	3300022756	Groundwater Sediment	MRKSWMILGLLAGALVFVTGGLANNGHGHGNSHHKFGPYDVVTDDHGSCGNPWAVDTEKRTYRVKRNHDGSYTLLRRDRGRFLTNEGQSPGACETRRPHG
Ga0247743_10208172	3300023067	Soil	MTKRLILPALLLAALALAATAAAGSGQGKGKGKGHGQHGKFGPYDVVTDDHGSCSNAWAVDTEKRTFKVRRNNDGSYTLTRYDRGTFLTNAGQSPGACNPKGKHGATVNAGVKGKFK
Ga0247751_10234011	3300023069	Soil	MTKRLILPALLLAALALAATAAAGSGQGKGKGKGHGQHGKFGPYDVVTDDHGSCSNAWAVDTEKRTFKVRRNNDGSYTLTRYDRGTFLTNAGQSPGACNPKGKHGATVNA
Ga0247752_10271731	3300023071	Soil	MTKRLILPALLLAALALAATAAAGSGQGKGKGKGHGQHGKFGPYDVVTDDHGSCSNAWAVDTE
Ga0247794_102183712	3300024055	Soil	MKKRWIVPTLLVAALALAATAAAGSGHGKGKGKGHHGKFGPYDVVTDDDGSCSNTWAVDTEKRTFKVRRNNDGSYTLTRYDRGTFLTNA
Ga0247680_10499071	3300024246	Soil	MKKRWIVPGLLVAACAFAASGAADPGHGHGNGHFKGKHGKFGPYDVVTDDGGTCGNAWAVDTEKRTFRVHKNHDGSYTVLRTDR
Ga0247674_10001851	3300024275	Soil	MKKRWILPGLLVAACAFAASGAADPGHGHGNGHFKGKHGKFGPYDVVTDDGGTCGNAWAVDTEKRTFRVHKNHDGSY
Ga0247681_10405571	3300024310	Soil	MKKRWILPGLLVAACAFAASGAADPGHGHGNGHFKGKHGKFGPYDVVTDDGGTCGNAWAVDAEKRTFRVHKNHDGSYTV
Ga0247678_10469151	3300024325	Soil	MQKRWILPGLLVAAFAFAATGLADPGHGQGNGPTKGKHGKLGPYDVVTDDHGSCSNPWAVDTEKRTFRVHKNRDGSYTLLRMDRGTFVTTGGKSPGACETKGRHG
Ga0207695_106101192	3300025913	Corn Rhizosphere	MKKRWIVPGLLVAAFALAATGLADPGHGKGKGQGHGKKSKFGPYDVVTDDHGSCGNTWAVDTEKRTFKVKQNKDGTFTVTRTDRGTFVTSAGQSPGACETKGK
Ga0207660_114652711	3300025917	Corn Rhizosphere	MKKRWIIPGLIVAALALAASGLADPGHGKGKGKSHHGKFGPYDVVTDDHGSCGNAWAVDTEKRTFKVRRNGDG
Ga0207662_113130011	3300025918	Switchgrass Rhizosphere	MKKRWILPGLLVAAFALAATGLADPGHGKGKGPGHGKGQGHGKKMKFGPYDVVTDDHGSCGNTWAVDTEKR
Ga0207652_115261391	3300025921	Corn Rhizosphere	MKKRWIIPGLIVAALALAASGLADPGHGKGKGKSHHGKFGPYDVVTDDHGSCGNAWAVDTEKRTFKVRRNGDGSYTLTRY
Ga0207646_119425042	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MKKRWIIPGLLAAALAFAAAGLAKNHPGHGNGHQKKFGPYGVVTDDHGSCGNAWASDTELRTFTVKRNKDGTFRLTRRDHGAFMTNDGQSPG
Ga0207650_111686241	3300025925	Switchgrass Rhizosphere	MKKRLILPGLLLAALALAATGLADPGHGTGHGKHGKFGPYAVVTDDHGSCGNAWAVDTEKRTFTVHKNHDGSYTLLRRDRG
Ga0207709_108724482	3300025935	Miscanthus Rhizosphere	MKKRWILPGLLVAAFALAATGLADPGHGKGKGPGHGKGQGHGKKMKFGPYDVVTDDHGSCGNTWAVDTEKRTFKVKQNKDGTFTVNRTDR
Ga0207709_110746512	3300025935	Miscanthus Rhizosphere	MRKRWILPGLLVAAFALAATGLADPGHGKGKGHGKQGKFGPYDVVTDDHGSCGNAWAVDTEKRTFTVH
Ga0207689_108491931	3300025942	Miscanthus Rhizosphere	MKKRWIVPGLLVAAFALAATGLADPGHGKGKGPGHGKGQGHGKKMKFGPYDVVTDDHGSCGNTWAVDTEKRTFKVRQNKDGTFTVTRTDRGTFLTS
Ga0207651_121528441	3300025960	Switchgrass Rhizosphere	MKKRWILPGLLTAALALAATGTADPGHGKGKSHHGKFGPYDVVTDDHGSCGNAWAVDTEKRTFKVRRNGDGSYTLTRY
Ga0207651_121567082	3300025960	Switchgrass Rhizosphere	MQKRWILPGLLVAAFAFAATGLADPGHGQGNGPTKGKHGKLGPYDVVTDDHGSCSNPSAVDTEKRTFRVHKNRDGSYTVLR
Ga0207532_1009051	3300026663	Soil	MTKRLILPALLLAALALAATAAAGSGQGKGKGKGHGQHGKFGPYDVVTDDHGSCSNAWAVDTEKRTFKVRRNNDGSY
Ga0207591_1053802	3300026827	Soil	MTKRLILPALLLAALALAATAAAGSGQGKGKGKGHGQHGKFGPYDVVTDDHGSCSNAWAVDTEKRTFKVRRNNDGSYTLTRYDRGTFLTNAG
Ga0207502_1055132	3300026828	Soil	MTKRLILPALLLAALALAATAAAGSGQGKGKGKGHGHHGKFGPYDVVTDDHGSCSNAWAVDTEKRTFKVRRNN
Ga0209811_100279184	3300027821	Surface Soil	MKKRWILPGLLVAAFALAATGLADPGHGKGPGKGKHGKFGPYAVVTDDHGSCGNAWAVDTEKRTFSVHKNADGSYTLLRRDRGTFLTNA
Ga0209382_118177111	3300027909	Populus Rhizosphere	MKKRWILPGLLVAAFALAATGLADPGHGKGAGHGKQGKFGPYDVVTDDHGSCGNAWALDTEKRTFTVHKNHDGSFTLLRRDRGTFLTNAG
Ga0247689_10528212	3300028281	Soil	MQKRWILPGLLVAAFAFAATGLADPGHGQGTGPTKGKHGKLGPYDVVTDDPGSCGTPWAVDTEKRTFRVHKNRDGSYTLLRMDRGTFVTTGGK
Ga0247818_107391312	3300028589	Soil	MKKRWILPGLLVAAFALAATGFADPGHGTGKGKHGKFGPYTVVTDDHGSCGQTHAWAVDTEKRTFTVHKNLDGSFTLVRRDRGTFLTNAGQSPGACETTKHHGATVL
Ga0307321_10145241	3300028704	Soil	MKKRWILPGLLVAAFALAATGLADPGHGKNTKKKFGPYDVVTDDNGSCGVTAWAVDTEKRTFTVKRN
Ga0307295_100533731	3300028708	Soil	MKKRWILPGLLVAAFALAATGLADPGHGKGKGPGHGKGQGHGKKMKFGPYDVVTDDHGSCGNTWAVDTEKRTFKVKQNKDGTFTVTRTDRGTFV
Ga0307307_101294102	3300028718	Soil	MQKRWIIPGLLAAAFAFAATGLANNGHGNGHQKKFGPYGLVTDDNGSCGNPWASDTELRTFTVKRNSDGTFR
Ga0307307_101686681	3300028718	Soil	MQKRWIIPGLLAAALALAATSAATPGHGHGKGKGHNKKFGPYAVVTDDHGSCGNAWATDTENRRFFVKKNHNGTYRLIRRDRGTFVTQAGQS
Ga0307319_100120901	3300028722	Soil	MKKRWILPGLLVAAFALAATGLATPGQGKGKGHGKKKFGPYDVVTDDNGTCGNAWALDTEKRSFKVRRNQDGSY
Ga0307319_101767142	3300028722	Soil	MKKRWILPGLLVAAFALAATGLADPGHGKGKGPGHGKGQGHGKKMKFGPYDVVTDDHGSCGNTWAVDTEKRTFKVKQNKDGTFTVTRTDRGTFVTSAGQSPGA
Ga0307280_101201841	3300028768	Soil	MKKRWILPGLLIAAFSLAATGLATPGHGQGKGQGHGKKSKFGPYAVVTDDNGTCANPWAVDTEKRSFKVRRNQDGSFTLTRYDRGTFLT
Ga0307306_100159441	3300028782	Soil	MQKRWIIPGLLAAALALAATSAATPGHGHGKGKGHNKKFGPYAVVTDDHGSCGNAWATDTENRRFFVKKNHNGTYRLIRRDRGTFVT
Ga0307323_100046691	3300028787	Soil	MKKRWILPGLLVAAFALAATGLADPGHGKGKGPGHGKGQGHGKKMKFGPYDVVTDDHGSCGNTWAVDTEKRTFKVKQNKDGTFTVTRTDRGTFVTSAGQS
Ga0307323_101708682	3300028787	Soil	MKKRWIVPGLLVAAFALAATGLANPGHGKGKGQGHGKKSKFGPYDVVFTDDHGSCGNTWAVDTEKRTFKVKQNKDG
Ga0307284_101671902	3300028799	Soil	MQKRWIIPGLLAAAFAFAATGLANNGHGKPHHGKFGPYDVVTDENGSCGNAWAVDTMKRTFKVKRNRDG
Ga0307284_104922171	3300028799	Soil	MKKRWILPGLLIAAFSLAATGLATPGHGQGKGQGHGKKSKFGPYAVVTDDNGTCANPWAVDTEKRSFKVRRNQDGSFTLTRYDRGTFLTNAGQ
Ga0307292_103441571	3300028811	Soil	MKKRWILPGLLVAAFALAATGLADPGHGKGKGPGHGKGQGHGKKMKFGPYDVVTDDHGSCGNTWAVDTEKRTFKVKQNKDGTF
Ga0247825_111819941	3300028812	Soil	MKKRWILPGLLVAAFALAATGFADPGHGTGKGKHGKFGPYTVVTDDHGSCGQTHAWAVDTEKRTFTVHKNLDGSFTLVRRDRGTFLTNAGQSPGACETTKHHGATLLPN
Ga0307278_101178672	3300028878	Soil	MQKRWIIPGLLAAAFAFAATGLANNGHGNGKPHHGKFGPYDVVTDENGSCGNAWAVDTMKRTFKVKRNRNGTFRLTRR
Ga0307304_103420722	3300028885	Soil	MKKRWILPGLLVAAFALAATGLADPGHGKGKGPGHGKGQGHGKKMKFGPYDVVTDDHGSCGNTWAVDTEKRTFKVKQNKDGTFTVT
Ga0247826_115945151	3300030336	Soil	MKKRWILPGLLVAAFALAATGFADPGHGTGKGKHGKFGPYTVVTDDHGSCGQTHAWAVDTEKRTFTVHKN
Ga0308197_103189521	3300031093	Soil	MRKSWMILGLLAGALVFVTGGLANNGHGHGNSHHKFGPYDVVTDDHGSCGNPWAVDTEKRTYRVKRNHDGSYTLLRRDRGRFLTNEGQSPGACETRRPHGT
Ga0310887_103806842	3300031547	Soil	MKKRWILPGLLVAACAFAASGAADPGHGHGNGHFKGKHGKFGPYDVVTDDGGTCGNAWAVDTEKRTFRVHKNHDGSYTVLR
Ga0307468_1022568291	3300031740	Hardwood Forest Soil	MKKRWIVPGLLVAAFALAATGLADPGHGKGKGQGHGKKSKFGPYDVVTDDHGSCGNTWAVDTEKRTFKVKQNKDGTFTVT
Ga0307410_112803291	3300031852	Rhizosphere	MKKHWILPALATAALAFAATGTAGGPGHGKAKGKGHHGKFGPYDVVTDDHGSCGNAWAVDTEKRTFKVRRNNDGSYTLTRYDRGTFLTLAGQSPGACNTKGKHGAT
Ga0307407_115466941	3300031903	Rhizosphere	MKKHWILPALATAALAFAATGTAGGPGHGKAKGKGHHGKFGPYDVVTDDHGSCGNAWAVDTEKRTFKVRRNNDGSYTLTRYDRGTFL
Ga0310901_102734731	3300031940	Soil	MKKRWILPGLLVAACAFAASGAADPGHGHGNGHFKGKHGKFGPYDVVTDDGGTCGNAWAVDTEKRTFR
Ga0307409_1001966523	3300031995	Rhizosphere	MKKHWILPALATAALAFAATGTAGGPGHGKAKGKGHHGKFGPYDVVTDDHGSCGNAWAVDTEKRTFKVRRNNDGSYTLTRYDRGT
Ga0308176_107738332	3300031996	Soil	MKKRWFVPTLLVAALALAATAAAGSGHGTGKGKGHHGKFGPYNVVTDDHGSCANAWAVDTEKRTFKVRRNNDGSYTLTRYDRGTFLTNTGRSPGACNP
Ga0307416_1038631182	3300032002	Rhizosphere	MKKHWILPALVTAALAFAATGVADPGHGKAKGKGHHGKFGPYNVVTDDHGSCGNAWAVDTEKRTFKVRRNNDGSYTLTRYDRGTFLTLAGPSPGACNPKGKHGTTVNAGVRGKFQG
Ga0308173_118015361	3300032074	Soil	MKKRWILPGLLVAAFALAATGLADPGHGKGKGPGQGKKMKFGPYDVVTDDHGSCGNTWAVDTEKRTFKVKQNKDGTFTVSRTDR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F053646

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences