Metagenome Family F053644

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F053644
Family Type	Metagenome
Number of Sequences	141
Average Sequence Length	80 residues
Representative Sequence	MQGLRVYVDLKRTDPQVGGLIFYSQRAGGPYYRWRYEELRGEWLCSRMHASDLTVSELVSAPWKEIPAALKSTLDLHYVE
Number of Associated Samples	106
Number of Associated Scaffolds	141

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	83.69 %
% of genes near scaffold ends (potentially truncated)	16.31 %
% of genes from short scaffolds (< 2000 bps)	73.76 %
Associated GOLD sequencing projects	86
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.69

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (94.326 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (12.057 % of family members)
Environment Ontology (ENVO)	Unclassified (46.809 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (73.759 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 17.59% β-sheet: 26.85% Coil/Unstructured: 55.56%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.69
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.69
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 141 Family Scaffolds
PF01192	RNA_pol_Rpb6	10.64
PF00118	Cpn60_TCP1	5.67
PF04107	GCS2	4.96
PF00072	Response_reg	3.55
PF00291	PALP	3.55
PF13443	HTH_26	2.13
PF02518	HATPase_c	1.42
PF16694	Cytochrome_P460	0.71
PF00487	FA_desaturase	0.71
PF00069	Pkinase	0.71
PF00158	Sigma54_activat	0.71
PF00930	DPPIV_N	0.71
PF08448	PAS_4	0.71
PF02537	CRCB	0.71
PF03372	Exo_endo_phos	0.71
PF02954	HTH_8	0.71
PF12680	SnoaL_2	0.71
PF06210	DUF1003	0.71
PF00196	GerE	0.71

COG ID	Name	Functional Category	% Frequency in 141 Family Scaffolds
COG1758	DNA-directed RNA polymerase, subunit K/omega	Transcription [K]	10.64
COG0459	Chaperonin GroEL (HSP60 family)	Posttranslational modification, protein turnover, chaperones [O]	5.67
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	2.84
COG0239	Fluoride ion exporter CrcB/FEX, affects chromosome condensation	Cell cycle control, cell division, chromosome partitioning [D]	0.71
COG0823	Periplasmic component TolB of the Tol biopolymer transport system	Intracellular trafficking, secretion, and vesicular transport [U]	0.71
COG1398	Fatty-acid desaturase	Lipid transport and metabolism [I]	0.71
COG1506	Dipeptidyl aminopeptidase/acylaminoacyl peptidase	Amino acid transport and metabolism [E]	0.71
COG3239	Fatty acid desaturase	Lipid transport and metabolism [I]	0.71
COG4420	Uncharacterized membrane protein	Function unknown [S]	0.71

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	94.33 %
Unclassified	root	N/A	5.67 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	94.33 %
Unclassified	root	N/A	5.67 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	94.33 %
Unclassified	root	N/A	5.67 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	75.18 %
Unclassified	root	N/A	5.67 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.71 %

Name	Rank	Taxonomy	Distribution
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	14.18 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	7.80 %
Unclassified	root	N/A	5.67 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.71 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.80 %
Unclassified	root	N/A	5.67 %
Blastocatellales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales	0.71 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.71 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.80 %
Unclassified	root	N/A	5.67 %
Pyrinomonadaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae	0.71 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.71 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.80 %
Unclassified	root	N/A	5.67 %
unclassified Pyrinomonadaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae	0.71 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.71 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.80 %
Unclassified	root	N/A	5.67 %
Pyrinomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	0.71 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.71 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2162886007\|SwRhRL2b_contig_198774	All Organisms → cellular organisms → Bacteria	4114	Open in IMG/M
2228664021\|ICCgaii200_c0191180	All Organisms → cellular organisms → Bacteria → Acidobacteria	544	Open in IMG/M
3300000787\|JGI11643J11755_11783189	All Organisms → cellular organisms → Bacteria → Acidobacteria	616	Open in IMG/M
3300000890\|JGI11643J12802_11974576	Not Available	543	Open in IMG/M
3300001431\|F14TB_101020213	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	543	Open in IMG/M
3300002090\|JGI24806J26614_1002791	All Organisms → cellular organisms → Bacteria	5755	Open in IMG/M
3300002100\|JGI24809J26612_1025145	All Organisms → cellular organisms → Bacteria → Acidobacteria	1001	Open in IMG/M
3300004114\|Ga0062593_100867471	All Organisms → cellular organisms → Bacteria → Acidobacteria	908	Open in IMG/M
3300004114\|Ga0062593_103074418	All Organisms → cellular organisms → Bacteria → Acidobacteria	534	Open in IMG/M
3300004463\|Ga0063356_101209274	All Organisms → cellular organisms → Bacteria	1098	Open in IMG/M
3300004463\|Ga0063356_105813256	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	529	Open in IMG/M
3300004480\|Ga0062592_102012717	All Organisms → cellular organisms → Bacteria → Acidobacteria	571	Open in IMG/M
3300005093\|Ga0062594_102036816	All Organisms → cellular organisms → Bacteria → Acidobacteria	615	Open in IMG/M
3300005289\|Ga0065704_10001477	All Organisms → cellular organisms → Bacteria → Acidobacteria	8375	Open in IMG/M
3300005289\|Ga0065704_10090156	All Organisms → cellular organisms → Bacteria → Proteobacteria	2801	Open in IMG/M
3300005289\|Ga0065704_10507030	All Organisms → cellular organisms → Bacteria → Acidobacteria	663	Open in IMG/M
3300005293\|Ga0065715_10009357	All Organisms → cellular organisms → Bacteria	5676	Open in IMG/M
3300005294\|Ga0065705_10527941	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	748	Open in IMG/M
3300005336\|Ga0070680_101826793	All Organisms → cellular organisms → Bacteria → Acidobacteria	527	Open in IMG/M
3300005343\|Ga0070687_100219389	All Organisms → cellular organisms → Bacteria → Acidobacteria	1164	Open in IMG/M
3300005345\|Ga0070692_10005237	All Organisms → cellular organisms → Bacteria	5502	Open in IMG/M
3300005354\|Ga0070675_100853635	Not Available	833	Open in IMG/M
3300005356\|Ga0070674_100558524	Not Available	962	Open in IMG/M
3300005364\|Ga0070673_102296229	All Organisms → cellular organisms → Bacteria → Acidobacteria	513	Open in IMG/M
3300005438\|Ga0070701_10350690	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	922	Open in IMG/M
3300005440\|Ga0070705_100559886	All Organisms → cellular organisms → Bacteria → Acidobacteria	878	Open in IMG/M
3300005441\|Ga0070700_100000109	All Organisms → cellular organisms → Bacteria	52612	Open in IMG/M
3300005444\|Ga0070694_101571714	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	558	Open in IMG/M
3300005459\|Ga0068867_100787183	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	847	Open in IMG/M
3300005468\|Ga0070707_100019990	All Organisms → cellular organisms → Bacteria	6313	Open in IMG/M
3300005530\|Ga0070679_101259441	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	685	Open in IMG/M
3300005544\|Ga0070686_100317918	All Organisms → cellular organisms → Bacteria	1160	Open in IMG/M
3300005549\|Ga0070704_101142710	All Organisms → cellular organisms → Bacteria → Acidobacteria	709	Open in IMG/M
3300005564\|Ga0070664_101075757	Not Available	757	Open in IMG/M
3300005577\|Ga0068857_100607152	All Organisms → cellular organisms → Bacteria	1034	Open in IMG/M
3300005616\|Ga0068852_100391689	All Organisms → cellular organisms → Bacteria → Acidobacteria	1365	Open in IMG/M
3300005617\|Ga0068859_100005812	All Organisms → cellular organisms → Bacteria	12530	Open in IMG/M
3300005617\|Ga0068859_100135699	All Organisms → cellular organisms → Bacteria → Acidobacteria	2533	Open in IMG/M
3300005617\|Ga0068859_101872017	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	662	Open in IMG/M
3300005618\|Ga0068864_102592451	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	513	Open in IMG/M
3300005840\|Ga0068870_10433559	All Organisms → cellular organisms → Bacteria → Acidobacteria	863	Open in IMG/M
3300005841\|Ga0068863_100107439	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2656	Open in IMG/M
3300005841\|Ga0068863_100350872	All Organisms → cellular organisms → Bacteria → Acidobacteria	1437	Open in IMG/M
3300005841\|Ga0068863_100845683	All Organisms → cellular organisms → Bacteria → Acidobacteria	914	Open in IMG/M
3300005843\|Ga0068860_101229104	All Organisms → cellular organisms → Bacteria → Acidobacteria	770	Open in IMG/M
3300005843\|Ga0068860_102276083	All Organisms → cellular organisms → Bacteria → Acidobacteria	562	Open in IMG/M
3300005843\|Ga0068860_102682621	All Organisms → cellular organisms → Bacteria → Acidobacteria	517	Open in IMG/M
3300006844\|Ga0075428_101581331	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	686	Open in IMG/M
3300006845\|Ga0075421_100208396	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	2415	Open in IMG/M
3300006846\|Ga0075430_100015931	All Organisms → cellular organisms → Bacteria	6401	Open in IMG/M
3300006846\|Ga0075430_101645428	All Organisms → cellular organisms → Bacteria → Acidobacteria	527	Open in IMG/M
3300006847\|Ga0075431_100113678	All Organisms → cellular organisms → Bacteria	2794	Open in IMG/M
3300006876\|Ga0079217_10000027	All Organisms → cellular organisms → Bacteria	25097	Open in IMG/M
3300006876\|Ga0079217_10352703	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	844	Open in IMG/M
3300006881\|Ga0068865_101231949	All Organisms → cellular organisms → Bacteria → Acidobacteria	663	Open in IMG/M
3300006894\|Ga0079215_10003546	All Organisms → cellular organisms → Bacteria	4261	Open in IMG/M
3300006894\|Ga0079215_11038305	All Organisms → cellular organisms → Bacteria → Acidobacteria	607	Open in IMG/M
3300006918\|Ga0079216_10946027	All Organisms → cellular organisms → Bacteria → Acidobacteria	657	Open in IMG/M
3300006969\|Ga0075419_10038199	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	2998	Open in IMG/M
3300006969\|Ga0075419_10468388	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	872	Open in IMG/M
3300007004\|Ga0079218_10001372	All Organisms → cellular organisms → Bacteria → Acidobacteria	8798	Open in IMG/M
3300009093\|Ga0105240_10779062	All Organisms → cellular organisms → Bacteria → Acidobacteria	1037	Open in IMG/M
3300009093\|Ga0105240_10902958	All Organisms → cellular organisms → Bacteria → Acidobacteria	950	Open in IMG/M
3300009094\|Ga0111539_10131694	All Organisms → cellular organisms → Bacteria	2928	Open in IMG/M
3300009100\|Ga0075418_12020487	All Organisms → cellular organisms → Bacteria → Acidobacteria	628	Open in IMG/M
3300009100\|Ga0075418_12663375	All Organisms → cellular organisms → Bacteria → Acidobacteria	546	Open in IMG/M
3300009101\|Ga0105247_10382057	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	999	Open in IMG/M
3300009147\|Ga0114129_10423481	All Organisms → cellular organisms → Bacteria → Acidobacteria	1751	Open in IMG/M
3300009148\|Ga0105243_10140480	All Organisms → cellular organisms → Bacteria → Acidobacteria	2060	Open in IMG/M
3300009148\|Ga0105243_10908754	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	876	Open in IMG/M
3300009174\|Ga0105241_10408855	All Organisms → cellular organisms → Bacteria → Acidobacteria	1192	Open in IMG/M
3300009174\|Ga0105241_10846939	All Organisms → cellular organisms → Bacteria → Acidobacteria	845	Open in IMG/M
3300009174\|Ga0105241_12179162	All Organisms → cellular organisms → Bacteria → Acidobacteria	549	Open in IMG/M
3300009545\|Ga0105237_10374574	All Organisms → cellular organisms → Bacteria → Acidobacteria	1428	Open in IMG/M
3300009551\|Ga0105238_10001672	All Organisms → cellular organisms → Bacteria	22292	Open in IMG/M
3300009551\|Ga0105238_11344632	All Organisms → cellular organisms → Bacteria → Acidobacteria	741	Open in IMG/M
3300010040\|Ga0126308_10694235	All Organisms → cellular organisms → Bacteria → Acidobacteria	699	Open in IMG/M
3300010166\|Ga0126306_10057675	All Organisms → cellular organisms → Bacteria → Acidobacteria	2705	Open in IMG/M
3300010397\|Ga0134124_10906949	All Organisms → cellular organisms → Bacteria → Acidobacteria	888	Open in IMG/M
3300010397\|Ga0134124_12576041	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	551	Open in IMG/M
3300010399\|Ga0134127_10206454	All Organisms → cellular organisms → Bacteria → Acidobacteria	1831	Open in IMG/M
3300010399\|Ga0134127_11406916	All Organisms → cellular organisms → Bacteria → Acidobacteria	768	Open in IMG/M
3300010399\|Ga0134127_12514317	All Organisms → cellular organisms → Bacteria → Acidobacteria	595	Open in IMG/M
3300010400\|Ga0134122_11215038	Not Available	755	Open in IMG/M
3300010400\|Ga0134122_12448875	All Organisms → cellular organisms → Bacteria → Acidobacteria	570	Open in IMG/M
3300010401\|Ga0134121_11007501	All Organisms → cellular organisms → Bacteria → Acidobacteria	818	Open in IMG/M
3300010401\|Ga0134121_11183240	All Organisms → cellular organisms → Bacteria → Acidobacteria	763	Open in IMG/M
3300011119\|Ga0105246_10947241	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	776	Open in IMG/M
3300012022\|Ga0120191_10067075	All Organisms → cellular organisms → Bacteria → Acidobacteria	668	Open in IMG/M
3300012958\|Ga0164299_11195291	All Organisms → cellular organisms → Bacteria → Acidobacteria	575	Open in IMG/M
3300013100\|Ga0157373_10992833	Not Available	626	Open in IMG/M
3300013307\|Ga0157372_10775696	All Organisms → cellular organisms → Bacteria → Acidobacteria	1114	Open in IMG/M
3300013308\|Ga0157375_13180920	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	548	Open in IMG/M
3300013308\|Ga0157375_13526393	All Organisms → cellular organisms → Bacteria → Acidobacteria	521	Open in IMG/M
3300013760\|Ga0120188_1059342	All Organisms → cellular organisms → Bacteria → Acidobacteria	509	Open in IMG/M
3300014325\|Ga0163163_11556044	Not Available	722	Open in IMG/M
3300014745\|Ga0157377_10938598	All Organisms → cellular organisms → Bacteria → Acidobacteria	650	Open in IMG/M
3300015372\|Ga0132256_101703518	All Organisms → cellular organisms → Bacteria → Acidobacteria	739	Open in IMG/M
3300015373\|Ga0132257_104476576	All Organisms → cellular organisms → Bacteria → Acidobacteria	508	Open in IMG/M
3300015374\|Ga0132255_102510053	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	787	Open in IMG/M
3300017792\|Ga0163161_11026905	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	705	Open in IMG/M
3300018422\|Ga0190265_11071244	All Organisms → cellular organisms → Bacteria → Acidobacteria	927	Open in IMG/M
3300018466\|Ga0190268_12021129	All Organisms → cellular organisms → Bacteria → Acidobacteria	531	Open in IMG/M
3300025900\|Ga0207710_10000553	All Organisms → cellular organisms → Bacteria	22414	Open in IMG/M
3300025904\|Ga0207647_10745182	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	531	Open in IMG/M
3300025908\|Ga0207643_10372425	All Organisms → cellular organisms → Bacteria → Acidobacteria	899	Open in IMG/M
3300025911\|Ga0207654_10449925	All Organisms → cellular organisms → Bacteria → Acidobacteria	903	Open in IMG/M
3300025911\|Ga0207654_10633748	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	765	Open in IMG/M
3300025911\|Ga0207654_10936224	All Organisms → cellular organisms → Bacteria → Acidobacteria	629	Open in IMG/M
3300025911\|Ga0207654_10973220	All Organisms → cellular organisms → Bacteria → Acidobacteria	617	Open in IMG/M
3300025917\|Ga0207660_11125264	All Organisms → cellular organisms → Bacteria → Acidobacteria	640	Open in IMG/M
3300025918\|Ga0207662_10092580	All Organisms → cellular organisms → Bacteria → Acidobacteria	1861	Open in IMG/M
3300025922\|Ga0207646_10017484	All Organisms → cellular organisms → Bacteria	6708	Open in IMG/M
3300025924\|Ga0207694_10084450	All Organisms → cellular organisms → Bacteria	2497	Open in IMG/M
3300025925\|Ga0207650_10066361	All Organisms → cellular organisms → Bacteria → Acidobacteria	2706	Open in IMG/M
3300025934\|Ga0207686_10294449	All Organisms → cellular organisms → Bacteria → Acidobacteria	1203	Open in IMG/M
3300025938\|Ga0207704_11287339	All Organisms → cellular organisms → Bacteria → Acidobacteria	625	Open in IMG/M
3300025941\|Ga0207711_10002430	All Organisms → cellular organisms → Bacteria	16626	Open in IMG/M
3300026035\|Ga0207703_10399272	All Organisms → cellular organisms → Bacteria	1275	Open in IMG/M
3300026075\|Ga0207708_10005070	All Organisms → cellular organisms → Bacteria	9714	Open in IMG/M
3300026088\|Ga0207641_10117151	All Organisms → cellular organisms → Bacteria → Acidobacteria	2371	Open in IMG/M
3300026088\|Ga0207641_10123410	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2315	Open in IMG/M
3300026088\|Ga0207641_10269524	All Organisms → cellular organisms → Bacteria	1597	Open in IMG/M
3300026088\|Ga0207641_12095787	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	566	Open in IMG/M
3300026089\|Ga0207648_11728704	All Organisms → cellular organisms → Bacteria → Acidobacteria	587	Open in IMG/M
3300026116\|Ga0207674_10135777	All Organisms → cellular organisms → Bacteria → Acidobacteria	2422	Open in IMG/M
3300026118\|Ga0207675_101010051	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	850	Open in IMG/M
3300027266\|Ga0209215_1012869	All Organisms → cellular organisms → Bacteria → Acidobacteria	1039	Open in IMG/M
3300027637\|Ga0209818_1000023	All Organisms → cellular organisms → Bacteria	37428	Open in IMG/M
3300027637\|Ga0209818_1000589	All Organisms → cellular organisms → Bacteria → Acidobacteria	7849	Open in IMG/M
3300027873\|Ga0209814_10136867	All Organisms → cellular organisms → Bacteria → Acidobacteria	1048	Open in IMG/M
3300027880\|Ga0209481_10148544	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1156	Open in IMG/M
3300027886\|Ga0209486_10003786	All Organisms → cellular organisms → Bacteria	6514	Open in IMG/M
3300027907\|Ga0207428_10071054	All Organisms → cellular organisms → Bacteria → Acidobacteria	2735	Open in IMG/M
3300027907\|Ga0207428_10249267	All Organisms → cellular organisms → Bacteria → Acidobacteria	1325	Open in IMG/M
3300027909\|Ga0209382_10160542	All Organisms → cellular organisms → Bacteria	2599	Open in IMG/M
3300027909\|Ga0209382_10209664	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	2229	Open in IMG/M
3300028380\|Ga0268265_11724739	All Organisms → cellular organisms → Bacteria → Acidobacteria	632	Open in IMG/M
3300031716\|Ga0310813_11394935	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	650	Open in IMG/M
3300031908\|Ga0310900_11423792	Not Available	583	Open in IMG/M
3300032421\|Ga0310812_10183448	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	903	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	60.99%
Environmental	Environmental	39.01%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	60.99%
Terrestrial	Environmental → Terrestrial	39.01%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	39.01%
Rhizosphere	Host-Associated → Plants → Rhizosphere	34.04%
Rhizoplane	Host-Associated → Plants → Rhizoplane	26.24%
Roots	Host-Associated → Plants → Roots	0.71%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	29.79%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	26.95%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	21.28%
Loam	Environmental → Terrestrial → Soil → Loam	12.06%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	4.96%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.26%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.71%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	29.79%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	21.28%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	14.89%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	10.64%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	9.22%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	4.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.26%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.13%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.71%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.71%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.71%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.71%

Habitat	Taxonomy	Distribution
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	12.06%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	12.06%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	9.22%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	6.38%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	6.38%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.38%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	4.26%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.84%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	2.84%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.84%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.13%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.13%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.13%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.13%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.13%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.42%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	1.42%
Terrestrial	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial	1.42%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.42%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.42%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.42%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.42%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.42%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.71%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.71%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.71%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.71%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.71%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.71%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.71%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.71%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2162886007	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
2228664021	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000787	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000890	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300002090	Soil microbial communities from Manhattan, Kansas, USA - Sample 200um MDA	Environmental	Open in IMG/M
3300002100	Soil microbial communities from Manhattan, Kansas, USA - Sample 500um MDA	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012022	Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - C6	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300013760	Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - C3.rep2	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025904	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)	Host-Associated	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027266	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM2H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027637	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200 (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300027886	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300032421	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NN3	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
SwRhRL2b_0339.00002620	2162886007	Switchgrass Rhizosphere	MKGLRIYLCKRTNPLGGGLIFYSQRAGGPCYRWRYEELRGEWLFSRMHAAELTVTELVSAPWKDIPALLKTTLDQHYLE
ICCgaii200_01911802	2228664021	Soil	MKGPRIYLDLKRVDSQGGELVYYSQRAGGPYYRWRYEELRGEWQCCRMQAGDLIVTELVSAPSKAIPAALKTNLELHYVE
JGI11643J11755_117831891	3300000787	Soil	MKGPRIYLDLKRVDSQGGELVYYSQRAGGPYYRWRYEELRGEWQCCRMQAGDLIVTELVSAPSKAIPAALKTNLEL
JGI11643J12802_119745762	3300000890	Soil	IYLDLKRVDSQGGELVYYSQRAGGPYYRWRYEELRGEWQCCRMQAGDLIVTELVSAPSKAIPAALKTNLEL
F14TB_1010202131	3300001431	Soil	MQGLRVYVDLKRTDPQVGALIFYSXRAGGPYYRWRYEELRGKWLCSRMHAGDFTVRELVSAPWKEIPAALKSTFDLH
JGI24806J26614_10027912	3300002090	Soil	MKGLRVYLNKRNNPQGGSLIFYSQRAGGPCYRWRYEELRGEWLCSRMHAGDLTLTELVSAPWKDIPALLKTTLDQHYVE*
JGI24809J26612_10251452	3300002100	Soil	MQGLRVYVDLKRTDPQVGGLIFYSQRAGGPYYRWRYEELRGKWLCSRMHAGDFTVRELVSAPWKEIPAALKSTLNLHYVE*
Ga0062593_1008674712	3300004114	Soil	MQGLRVYVHLKRADPQVGALIFYSQRAGGPYYRWRYEELRGEWLCSRMHAGDLTVRELVSAPWKEIPDALKSTLDQHYVE*
Ga0062593_1030744181	3300004114	Soil	MKGLRVYFNLKRADLPGGGLIFYSQRAGGPYYRWRYEELRGEWLGSRMHAGDLILSDLVSAPWKDIPAGLKTTLDQHYVE*
Ga0063356_1012092742	3300004463	Arabidopsis Thaliana Rhizosphere	MKGLRIYLDLKRVNPQGEGVIFYSHRAGGPYYRWRYEERRGEWLCSRMHVGDLVITELVSAPWKEIPATLKSTLDLHYVE*
Ga0063356_1058132561	3300004463	Arabidopsis Thaliana Rhizosphere	KRTDPQVGGLIFYSRRAGGPYYRWRYEELRGEWLCSRMHAGDLTVRELVSAPWKEIPAALKTTLRLHYVE*
Ga0062592_1020127171	3300004480	Soil	MKGLRIYLSKGNNPQGGSLIFYSQRAGGPCYRWRYEELRGEWLCSRLHAGDLMLTELVSAPWKDIPAL
Ga0062594_1020368161	3300005093	Soil	MSSRSMHGLRVYVDLERTDPPVGGLIFYSQRAGGPYYRWRYEELRGEWLCSRMHAGDLIVSELVSAPWREIPAALKATLNLHYVE*
Ga0065704_100014776	3300005289	Switchgrass Rhizosphere	MKGLRIYLCKRTNPLGGGLIFYSQRAGGPCYRWRYEELRGEWLFSRMHAAELTVTELVSAPWKDIPALLKTTLDQHYLE*
Ga0065704_100901566	3300005289	Switchgrass Rhizosphere	MQGLKVYFDLKRTDPQVGGLIFYSQRAGGPYYRWRYEELRGEWLCSRMHAGDLAVRELVSAPWKEIPADLKTTLDLHYVE*
Ga0065704_105070301	3300005289	Switchgrass Rhizosphere	MQGLRVYLDLKRADLLGGGLIFYTQRAGGPYYRWRYEELRGKWLCSRMHACDLTLSDLISAPWKDIPALLKTTLDQHYVE*
Ga0065715_100093574	3300005293	Miscanthus Rhizosphere	MKGLRVYLSKRTNPLGGGPIFYSQRAGGPCYRWRYEELRGEWMFSRMHAADLTLMELVSAPWKEIPALLKTTLDQHYLE*
Ga0065705_105279412	3300005294	Switchgrass Rhizosphere	MHGLRVYVDLERTDPQVGDLIFYSQRESGPYYRWRYEELRGEWLFSRMHAGDLTVSELVSAPWNEIPAALKSTLDLHYVE*
Ga0070680_1018267932	3300005336	Corn Rhizosphere	MHGLRVYVDLERTDPPVGGLIFYSQRAGGPYYRWRYEELRGEWLCSRMHAGDLIVSELVSAPWREIPAALKATLNLHYVE*
Ga0070687_1002193892	3300005343	Switchgrass Rhizosphere	MHGLRVYVDLERTDPPVGGLIFYSQRAGGPYYRWRYEELRGEWLCSRMHAGDLTVRELVSAPWKEIPAALKSTLDLHYVE*
Ga0070692_100052378	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	MQGLKVYLDLKRTDPQVGGLIFYSQRAGGPYYRWRYEELRGEWLCSRMHAGDLIVRELVSAPWKEIPAALKTTLDLHYVE*
Ga0070675_1008536352	3300005354	Miscanthus Rhizosphere	MKGLRVYLCKRTNPLGGGLIFYSQRAGGPCYRWRYEELREKWLCSRMHAGDLILTELISAPWKDIPAALRTTLDQHYVE*
Ga0070674_1005585242	3300005356	Miscanthus Rhizosphere	MKGLRVYLCKRTNPLGGGLIFYSQRAGGPCYRWRYEEIRGEWMFSRMHAADLTLTELVTAPWKDIPALLKTTLDQHYLE*
Ga0070673_1022962291	3300005364	Switchgrass Rhizosphere	MSSKTMQGLRVYVDLKRADPRAGGLIFYSQRAGGPYYRWRYEELRGEWLCSRMHAGDLIVSELVSAPWREIPAALKATLNLHYVE*
Ga0070701_103506902	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	MQGLRVYVDLKRADPRAGGLIFYSQRAGGPYYRWRYEELRGEWLCSRMHAGDLTVRALVSAPWKEIPAALKSTLDLHYVE*
Ga0070705_1005598861	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MKGLRVYLDLKRVDLRGGGLTFYSQRAGGPYYRWRYEELRGEWLCSRMQAGDLTLSELVSAPWKDIPAALKTTLDQ
Ga0070700_10000010914	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MKGLRVYLDPKRSDPRGGGLIFYSQRAGGPCYRWRFEELRGKWLCSRMHAGDLILTELISAPWKDIPAALRTTLDQHYVE*
Ga0070694_1015717141	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MSSRSMHGLRVYVDLERTDPPVGGLIFYSQRAGGPYYRWRYEELRGEWLCSRMHAGDLTVRELVAAPWKEIPAALKSTLDLHYVE*
Ga0068867_1007871832	3300005459	Miscanthus Rhizosphere	MHGLRVYVDLERTDPPVGGLIFYSQRAGGPYYRWRYEELRGEWLCSRMHAGDLIVSELVSAPWKEIPAALKATLGLHYVE*
Ga0070707_1000199903	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MKGIRVYLNLKRADLLARGPVFYSHRPGGPYYRWRYEELRGEWLSSRMHASDLTLTELVSAPWKEIPATLKSTLDQHYVE*
Ga0070679_1012594412	3300005530	Corn Rhizosphere	MKGIRVYLNLKRADLLGRGPVFYSHRPGGPYYRWRYEELRGEWLSSRMHASDLTLTELVSAPWKEIPATLRTTLDQHYVE*
Ga0070686_1003179181	3300005544	Switchgrass Rhizosphere	MKGLRVYLSKRANPLGGGPIFYSQRAGGPCYRWRYEELRGEWMFSRMHAADLTLMELVSAPWKEIPALLKTTLDQHYLE*
Ga0070704_1011427102	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MQGLRVYLDLKRTDPRVGDFIFYSQRAGGPYYRWRYEELRGEWLCSRMHAGDLTVRKLVSAPWKEVPAALKSTLDLHYVE*
Ga0070664_1010757571	3300005564	Corn Rhizosphere	MKGLRVYLSKRANPLGGGLIFYSQLAGGPCYRWRYEELRGKWIFSRMHATDLMLMELVPAPWKDIPALLKTTLDQHYLE*
Ga0068857_1006071522	3300005577	Corn Rhizosphere	MQGLRVYVDLKRTDPQVGGLIFYSQRAGGPYYRWRYEELRGEWLCSRMHAGDLTVRELVAAPWKEIPAALKSTLDLHYVE*
Ga0068852_1003916892	3300005616	Corn Rhizosphere	MKGLRVYLSKRANPLGGGLIFYSQRAGGPCYRWRYEELRGEWMFSRMHAADLTLMELVSAPWKEIPALLKTTLDQHYLE*
Ga0068859_1000058127	3300005617	Switchgrass Rhizosphere	MKGLRVYLDPKRSDPRGGGLIFYSQRAGGPCYRWRYEELREKWLCSRMHAGDLILTELISAPWKDIPAALRTTLDQHYVE*
Ga0068859_1001356991	3300005617	Switchgrass Rhizosphere	MKGLRVYLSKRTNPLGGGPIFYSQRAGGPCYRWRYEEIRGEWMFSRMHAADLTLMELVSAPWKEIPALLKTTLDQHYLE*
Ga0068859_1018720172	3300005617	Switchgrass Rhizosphere	MHGLRVYVDLERTDPPVGGLIFYSQRAGGPYYRWRYEELRGEWLCSRMHAGDLIVSELVSAPWKEIPADLKTTLDLHYVE*
Ga0068864_1025924512	3300005618	Switchgrass Rhizosphere	MKGIRVYLNLKRADLLGRGPVFYSHRPGGPYYRWRYEELRGEWQSSRMHASDLTLTELVSAPWKEIPATLRTTLDQHYVE*
Ga0068870_104335592	3300005840	Miscanthus Rhizosphere	MQGLRVYVDLKRTDPQVGGLIFYSQRAGGPYYRWRYEELRGEWLCSRMHASDLTVSELVSAPWKEIPAALKSTLDLHYVE*
Ga0068863_1001074392	3300005841	Switchgrass Rhizosphere	MKGLRLYLCKRANPLGGGHIFYSQREGGPYYRWRFEELRGEWLCARIHGADLSLTDLVSAPWKDIPALLKTTLDQHYVE*
Ga0068863_1003508721	3300005841	Switchgrass Rhizosphere	MQGLKVYVDLKRTDRQVGGLIFYSQRAGGPYYRWQYEELRGEWLCSRMHAGDLTVRELVSAPWKELPATLKSTLDLHYVE*
Ga0068863_1008456831	3300005841	Switchgrass Rhizosphere	MQGLKVYFDLKRTDPQVGGLIFYSQRAGGPYYRWRYEELRGEWLCSRMHAGDLTVRELVAAPWKEIPAALKSTLDLHYVE*
Ga0068860_1012291042	3300005843	Switchgrass Rhizosphere	MQGLRVYVDLKRADPRAGGLIFYSQRAGGPYYRWRYEELRGEWLCSRMHAGDLTVRELVAAPWKEIPAALKTTLDLHYVE*
Ga0068860_1022760831	3300005843	Switchgrass Rhizosphere	MHGLRVYVDLERTDPPVGGLIFYSQRAGGPYYRWRYEELRGEWLCSRMHAGDLIVSELVSAPWKEIPAALKTTLNLHYVE*
Ga0068860_1026826212	3300005843	Switchgrass Rhizosphere	MQGLRVYLDPKRTDLLSADLIFYTQRAGGPYYRWRYEELRGEWLCSRMHPCDLKLSDLVSAPWKDIPAALKSTLDQHYVE*
Ga0075428_1015813311	3300006844	Populus Rhizosphere	MQGLRVYVDLKRTDPQVAGLIFYSQRAGGPYYRWRYEELRGEWLCSRMHAGDLTMSELVSAPWKEVPAALKTTLDLHYVE*
Ga0075421_1002083963	3300006845	Populus Rhizosphere	MQGLRVYVDLKRTDPQVAGLIFYSQRAGGPYYRWRYEELRGEWLCSRMHAGDLTMRELVSAPWKEVPAALKTTLDLHYVE*
Ga0075430_1000159315	3300006846	Populus Rhizosphere	MQGLRVYVDLKRADPQVGGLIFYSQRAGGPYYRWRYEELRGEWLCSRMHANDLTMRELVSAPWREVPAALKTTLDLHYVE*
Ga0075430_1016454281	3300006846	Populus Rhizosphere	MKGLRLYLDLKRPNPQGGGLTFYSHRAGGPYYRWRYEELRGEWLCSRMHAGDLVVTELVSAPWKEVPAGLRTTLDLHYVE*
Ga0075431_1001136782	3300006847	Populus Rhizosphere	MQGLRVYVDLKRAEPQVGGLIFYSQRAGGPYYRWRYEELRGEWLCSRMHANDLTMRELVSAPWREVPAALKTTLDLHYVE*
Ga0079217_1000002717	3300006876	Agricultural Soil	MKGLRLYFDLKRPDPQGGGLIFYSHRAGGPYYRWRYEALRGEWLCSRMHAGDLVVTELVSAPWKEVPAGLRTTLDLHYVE*
Ga0079217_103527033	3300006876	Agricultural Soil	MKGLRVYLDSTRADLQGGSLIFYSQRAGGPYYRWRYEELRGWLCSRMHAGDLTFTQLVSAPWKEIPAG
Ga0068865_1012319492	3300006881	Miscanthus Rhizosphere	LNKCRVRSMQGLRVYVDLKRTDPQVGGLIFYSQRAGGPYYRWRYEELRGEWLCSRMHAGDLIVSELVSAPWREIPAALKATLNLHYVE*
Ga0079215_100035467	3300006894	Agricultural Soil	MKGLRLYLDLKRPDPQGGGLIFYSHRAGGPYYRWRYEALRGEWLCSRMHAGDLVVTELVSAPWKEVPAGLRTTLDLHYVE*
Ga0079215_110383051	3300006894	Agricultural Soil	MKGLRVYLDSTRADLQGGSLIFYSERAGGPYYRWRYEEVRGWLCSRMHAGDLTFTQLVSAPWKEIPAGLKTTLDQHYVE*
Ga0079216_109460273	3300006918	Agricultural Soil	MKGLRIYLDLKRANPQGEGVIFYSHRAGGPYYRWRYEERRGEWLCSRMHVGDLVITELVSAPWKEIPATLKSTLDLHYVE*
Ga0075419_100381993	3300006969	Populus Rhizosphere	MQGLRVYVDLKRADPQVGGLIFYSQRAGGPYYRWRYEELRGEWLCSRMHAGDLTMSELVSAPWKEVPAALKTTLDLHYVE*
Ga0075419_104683883	3300006969	Populus Rhizosphere	MKGLRVYLDLKRVDPQGGDLIFYSHLAGGPYYRWRYEELRGEWLCSRMHAGDLVVTELVSAPWKEVPAGLRTTL
Ga0079218_100013728	3300007004	Agricultural Soil	MKGLRVYLDSTRADLQGGSLIFYSQRAGGPYYRWRYEEVRGWLCSRMHAGDLTFTQLVSAPWKEIPAGLKTTLDQHYVE*
Ga0105240_107790622	3300009093	Corn Rhizosphere	MHGLRVYLDLKTTDPQVGGLIFYSQRAGGPYYRWRYEELRGEWLCSRMHAGDLIVSELVSAPWKEIPADLKTTLDLHYVE*
Ga0105240_109029581	3300009093	Corn Rhizosphere	MQGLRVYLDLTDPQMGGLIFYSQRAGGPYYRWRYEELRVEWLCYRMHAGDLTVRKLVSAPWKEVPAALKSTLDLH
Ga0111539_101316941	3300009094	Populus Rhizosphere	PDRSMKGLRVYLDLKRVDPQGGDLIFYSHLAGGPYYRWRYEELRGEWLCRRVHAGDLTVTELVSAPWKEIPAALKTNLDLHYVE*
Ga0075418_120204872	3300009100	Populus Rhizosphere	MQGLRVYVDLKRADSQVGGLIFYSQRAGGPYYRWRYEELRGEWLCSRMHANDLTMRELVSAPWREVPAALKTTLDLHYVE*
Ga0075418_126633752	3300009100	Populus Rhizosphere	MKGLRLYLDLKRPNPQGGGLTFYSHRAGGPYYRWRYEELRGEWLCSRMHAGDLVVTELVSAPWKEIPAALKTNLDLHYVE*
Ga0105247_103820571	3300009101	Switchgrass Rhizosphere	MQGLRVYVDLKRTDPRAGGLIFYSQRAGGPYYRWRYEELRGEWLCSRMHAGDLTVRELVAAPWKEIPAALKSTLDLHYVE*
Ga0114129_104234812	3300009147	Populus Rhizosphere	MFFGTPTRSMKGLRIYHDLERADPQGGGRIFYSQRAGGPYYRWRYEERRGEWLYSRMHAADLVVTELVSAPWKEIPAGLRTTLDLHYVE*
Ga0105243_101404805	3300009148	Miscanthus Rhizosphere	MQGLRVYLDPKRADLLSADLIFYTQRAGGPYYRWRYEELRGEWLCSRMHPCDLKLSDLVSAPWKDIPAALKSTLDQHYVE*
Ga0105243_109087542	3300009148	Miscanthus Rhizosphere	MKGLRVYLSKRTNPLGGGPIFYSQRAGGPCYRWRYEELRGEWRCSRIHGGDLSLMDLVSAPWKDIPALLKTTLDQ
Ga0105241_104088552	3300009174	Corn Rhizosphere	MQGLRVYLDPKRTDLLSADLIFYTQRAGGPYYRWRYEELRGEWLCSRMHPCDLKLSDLVSAPWKDIPAALKTTLDQHYVE*
Ga0105241_108469392	3300009174	Corn Rhizosphere	MQGLRVYLDLTDPQMGGLIFYSQRAGGPYYRWRYEELRGEWLCSRMHAGDLTVRELVAAPWKEIPAALKTTLDLHYVE*
Ga0105241_121791621	3300009174	Corn Rhizosphere	MQGLRVYVHLKRADPQVGALIFYSQRAGGPYYRWRYEELRGEWLCSRMHASDLTVSELVSAPWKEIPAALKSTLDLHYVE*
Ga0105237_103745743	3300009545	Corn Rhizosphere	MHGLRVYVDLERTDPPVGGLIFYSQRAGGPYYRWRYEELRGEWLCSRMHAGDLTVRELVSAPWKGIPAALKTTLDLHYVE*
Ga0105238_1000167223	3300009551	Corn Rhizosphere	MHGLRVYLDLKTTDQQVGGLIFYSQRTGGPYYRWRYEELRGEWLCSRMHAGDLTVSELVSAPWKEIPAALKATLNLHYVE*
Ga0105238_113446321	3300009551	Corn Rhizosphere	MQGLRVYLDLKRTEPQVGDLIFYSQRAGGPYYRWRYEELRGEWLYSRIHAGDLTVNELVSAPWKELPTALKSTLDLHYVE*
Ga0126308_106942352	3300010040	Serpentine Soil	MKGLRIYVNPKRTDPWGGLIFYTQRAGGPYYRWQYEELRGEWLSSRVRAADLTAAELVTAPWKGVPPALKTTLDEHYVD*
Ga0126306_100576756	3300010166	Serpentine Soil	MKGLRIFVNPKRTDPWGGLIFYTQRAGGPYYRWRYEELRGEWLCSRMRAADLTAAELVTAPWKGIPPALKTTLDEHYVD*
Ga0134124_109069492	3300010397	Terrestrial Soil	MQGLRVYVDLKRADPRAGGLIFYSQRAGGPYYRWRYEELRGEWLCSRMHAGDLTVRELVAAPWKEIPAALKSTLDLHYVE*
Ga0134124_125760411	3300010397	Terrestrial Soil	MQGIRVYVDLKRTDRQVGGLIFYSQRAGGPYYRWWYEELRGEWLCSRMHAGDLTVRALVSAPWKGIPAALKTTLDLHYVE*
Ga0134127_102064543	3300010399	Terrestrial Soil	MKGLRVYLDLKRVDPQGEDLIFYSQRAGGPYYRWRYEELRGEWLCCRMHAGDLVVTELVLAPWKEIPAALKTNLDLHYVE*
Ga0134127_114069162	3300010399	Terrestrial Soil	MKGLRVYLSERTNPLGGGLIFYTQRAGGPCYRWCYEEFRGEWLYSRMHAGDLTLTELVSAPWKDIPTLLKTTL
Ga0134127_125143171	3300010399	Terrestrial Soil	MSSRSMQGLRVYLDLTDPQMGGLIFYSQRAGGPYYRWRYEELRGEWLCSRMHAGDLTVRKLVSAPWKEVPAALKSTLDLHYVE*
Ga0134122_112150382	3300010400	Terrestrial Soil	MKGLRVYLSKRAYPLGGGDIFYSQREGGPYYRWRYEELRGEWLCCRMHAGDLVVTELVLAPWKEIPAALKTNLDLHYVE*
Ga0134122_124488752	3300010400	Terrestrial Soil	MQGLRVYVALKRTDPQVGGLIFYSQRAGGPYYRWRYEELRGEWLCSRMHARDLTGRELVSAPWKEIPAALKTMLDLHYVE*
Ga0134121_110075011	3300010401	Terrestrial Soil	VHLKRADPQVGALIFYSQRAGGPYYRWRYEELRGEWLCSRMHAGDLIVSELVSAPWREIPAALKATLNLHYVE*
Ga0134121_111832401	3300010401	Terrestrial Soil	MKGLRVYLSKRAYPLGGGDIFYSQREGGPYYRWRYEGLRGEWRCSRIHGGDLSLMDLVSAPWKDIPALLKTTLDQHYVE*
Ga0105246_109472412	3300011119	Miscanthus Rhizosphere	MHGLRVYVDLERTDPPVGGLIFYSQRAGGPYYRWRYEELRGEWLCSRMHAGDLTVRELVAAPWKEIPAALKTTLDLHYVE*
Ga0120191_100670752	3300012022	Terrestrial	MQGLRVYVELKRTAPQVGGLIFYSQRAGGPYYRWRYEELRGEWLCSRMHAGDLTARELVSAPWKDIPALLKTTLDQHYVE*
Ga0164299_111952911	3300012958	Soil	MKGLRVYLDPKRSDPRGGGLIFYSQRAGGRCDRWRYEELREKWLCSRMHAGDLILTELISAPWKDIPAALRTTLDQHYVE*
Ga0157373_109928332	3300013100	Corn Rhizosphere	MKGLRIYLSRRANPLGGGLIFYSQRAGGPCYRWQYEELRGEWMFSRMHAADLTLTELVSASWKDIPSLLKTTLDQHYLE*
Ga0157372_107756962	3300013307	Corn Rhizosphere	MQGLKVYFDLKRTDPQVGGLIFYSQRAGGPYYRWRYEELRGEWLCSRMHAGDLIVSELVSAPWREIPAALKATLNLHYVE*
Ga0157375_131809202	3300013308	Miscanthus Rhizosphere	MHGLRVYVDLERTDPPVGGLIFYSQRAGGPYYRWRYEELRGEWLCSRMHAGDLIVSELVSAPWREIPAALK
Ga0157375_135263931	3300013308	Miscanthus Rhizosphere	MQGLRVYLDLTDPQMGGLIFYSQRAGGPYYRWRYEELRGEWLCSRMHAGDLTVSELVSAPWKEIPAALKATLNLHYVE*
Ga0120188_10593422	3300013760	Terrestrial	MKGLRVYLNLKRRAEPHGGGLTFYSQRAGGPYYRWRYEELRGEWLCSRMHAGDLVVTELVSAPWKDVPAALKTTLNLHYVE*
Ga0163163_115560442	3300014325	Switchgrass Rhizosphere	MKGLRVYLTKGANPLGGGHIFYSQREGGPYYRWRYEELRGEWLCSRLHGGDLSLTELVSAPWKDIPALLKTTLDQHYVE*
Ga0157377_109385981	3300014745	Miscanthus Rhizosphere	MHGLRVYVDLERTDPPVGGLIFYSQRAGGPYYRWRYEELRGEWLCSRMHAGDLIVSELVSAPWKEIPAALKSTLDLHYVE*
Ga0132256_1017035182	3300015372	Arabidopsis Rhizosphere	MQGLRVYVDLKRTDPRAGGLIFYSQRAGGPYYRWRYEELRGEWLCSRMHAGDLAVRELVSAPWKEIPAALKSTLDLHYVE*
Ga0132257_1044765761	3300015373	Arabidopsis Rhizosphere	MQGLRVYVDLKRADPRAGGLIFYSQRAGGPYYRWRYEELRREWLCSRMPAGDLTVRELVAAPWKEVPAALKTTLVLHYVE*
Ga0132255_1025100532	3300015374	Arabidopsis Rhizosphere	MQGLRVYVDLKRTEPQVRGLIFYSQRAGGPYYRWRYEELRGEWLCSRMHAGDLTLSELVSAPWKEIPAALKSTLDLHYVE*
Ga0163161_110269051	3300017792	Switchgrass Rhizosphere	MHGLRVYVDLERTDPPVGGLIFYSQRAGGPYYRWRYEELRGEWLCSRMHAGDLTVSELVSAPWNEIPAALKSTL
Ga0190265_110712442	3300018422	Soil	MKGLRVYHDFRRADPQGGGRIFYSQRAGGPYYRWRYEELRGEWLCSRMHAGDLIVTELVSAPWKEIPATLKTTLDLHYVE
Ga0190268_120211291	3300018466	Soil	LSLICGMPSRSIKGLKVYLDLKRADPQGEGLIFYSHRAGGPYYRWRYEELRGEWLCSRMHAGDLVVTELVSAPWKEVPAGLRTTLDLHYVE
Ga0207710_1000055317	3300025900	Switchgrass Rhizosphere	MKGLRVYLSKRTNPLGGGPIFYSQRAGGPCYRWRYEELRGEWMFSRMHAADLTLMELVSAPWKEIPALLKTTLDQHYLE
Ga0207647_107451821	3300025904	Corn Rhizosphere	MHGLRVYVDLERTDPPVGGLIFYSQRAGGPYYRWRYEELRGEWLCSRMHAGDLTVRELVAAPWKEIPAALKSTLDLHYVE
Ga0207643_103724252	3300025908	Miscanthus Rhizosphere	MQGLRVYVDLKRTDPQVGGLIFYSQRAGGPYYRWRYEELRGEWLCSRMHASDLTVSELVSAPWKEIPAALKSTLDLHYVE
Ga0207654_104499251	3300025911	Corn Rhizosphere	MQGLRVYLDPKRTDLLSADLIFYTQRAGGPYYRWRYEELRGEWLCSRMHPCDLKLSDLVSAPWKDIPAALKTTLDQHYVE
Ga0207654_106337481	3300025911	Corn Rhizosphere	MKGIRVYLNLKRADLLGRGPVFYSHRPGGPYYRWRYEELRGEWLSSRMHASDLTLTELVSAPWKEIPATLRTTLDQHYVE
Ga0207654_109362241	3300025911	Corn Rhizosphere	MKGLRVYLSKRANPLGGGPIFYSQRAGGPCYRWRYEELRGEWMFSRMHAADLTLMELVSAPWKEIPALLKTTLDQHYLE
Ga0207654_109732202	3300025911	Corn Rhizosphere	MHGLRVYVDLERTDPPVGGLIFYSQRAGGPYYRWRYEELRGEWLCSRMHAGDLIVSELVSAPWREIPAALKATLNLHYVE
Ga0207660_111252642	3300025917	Corn Rhizosphere	MSSRSMHGLRVYVDLERTDPPVGGLIFYSQRAGGPYYRWRYEELRGEWLCSRMHAGDLIVSELVSAPWREIPAALKATLNLHYVE
Ga0207662_100925802	3300025918	Switchgrass Rhizosphere	MQGLRVYLDPKRADLLSADLIFYTQRAGGPYYRWRYEELRGEWLCSRMHPCDLKLSDLVSAPWKDIPAALKSTLDQHYVE
Ga0207646_100174846	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MKGIRVYLNLKRADLLARGPVFYSHRPGGPYYRWRYEELRGEWLSSRMHASDLTLTELVSAPWKEIPATLKSTLDQHYVE
Ga0207694_100844504	3300025924	Corn Rhizosphere	MHGLRVYLDLKTTDQQVGGLIFYSQRTGGPYYRWRYEELRGEWLCSRMHAGDLTVSELVSAPWKEIPAALKATLNLHYVE
Ga0207650_100663611	3300025925	Switchgrass Rhizosphere	MKGLRVYLSKRANPLGGGLIFYSQLAGGPCYRWRYEELRGKWIFSRMHATDLMLMELVPAPWKDIPALLKTTLDQHYLE
Ga0207686_102944491	3300025934	Miscanthus Rhizosphere	MHGLRVYVDLERTDPPVGGLIFYSQRAGGPYYRWRYEELRGEWLCSRMHAGDLIVSELVSAPWKEIPAALKATLGLHYVE
Ga0207704_112873391	3300025938	Miscanthus Rhizosphere	VYVDLERTDPPVGGLIFYSQRAGGPYYRWRYEELRGEWLCSRMHAGDLIVSELVSAPWREIPAALKATLNLHYVE
Ga0207711_1000243012	3300025941	Switchgrass Rhizosphere	MKGLRVYLDPKRSDPRGGGLIFYSQRAGGPCYRWRYEELREKWLCSRMHAGDLILTELISAPWKDIPAALRTTLDQHYVE
Ga0207703_103992722	3300026035	Switchgrass Rhizosphere	MKGLRVYLSKRANPLGGGLIFYSQRAGGPCYRWRYEELRGEWMFSRMHAADLTLMELVSAPWKEIPALLKTTLDQHYLE
Ga0207708_1000507014	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MKGLRVYLDPKRSDPRGGGLIFYSQRAGGPCYRWRFEELRGKWLCSRMHAGDLILTELISAPWKDIPAALRTTLDQHYVE
Ga0207641_101171512	3300026088	Switchgrass Rhizosphere	MQGLKVYVDLKRTDRQVGGLIFYSQRAGGPYYRWQYEELRGEWLCSRMHAGDLTVRELVSAPWKELPATLKSTLDLHYVE
Ga0207641_101234102	3300026088	Switchgrass Rhizosphere	MKGLRLYLCKRANPLGGGHIFYSQREGGPYYRWRFEELRGEWLCARIHGADLSLTDLVSAPWKDIPALLKTTLDQHYVE
Ga0207641_102695241	3300026088	Switchgrass Rhizosphere	LSCRMPSWSMKGLRVYLDPKRSDPRGGGLIFYSQRAGGPCYRWRYEELREKWLCSRMHAGDLILTELISAPWKDIPAALRTTLDQHYVE
Ga0207641_120957871	3300026088	Switchgrass Rhizosphere	MQGLRVYVDLKRADPRAGGLIFYSQRAGGPYYRWRYEELRGEWLCSRMHAGDLTVRELVAAPWKEIPAALKSTLDLHYV
Ga0207648_117287041	3300026089	Miscanthus Rhizosphere	MQGLRVYLDLKSPDPRGGLIFYSQRAGGPYYRWRYEEFRGEWLCSRMHAGDLTVMELVSAPWKQIPAALKSTLDLHYVE
Ga0207674_101357772	3300026116	Corn Rhizosphere	MQGLRVYVDLKRTDPRAGGLIFYSQRAGGPYYRWRYEELRGEWLCSRMHAGDLTVRELVAAPWKEIPAALKSTLDLHYVE
Ga0207675_1010100511	3300026118	Switchgrass Rhizosphere	MHGLRVYVDLERTDPPVGGLIFYSQRAGGPYYRWRYEELRGEWLCSRMHAGDLTVRELVAAPWKEIPAALKTTLDLHYVE
Ga0209215_10128692	3300027266	Forest Soil	MKGLRVYLSKRANPLGGALIFYSQRAGGPYYRWRYEEFRGEWLCSRMHGSDLTLAELVSAPWKDIPALLKTTLDQHYVE
Ga0209818_10000235	3300027637	Agricultural Soil	MKGLRIYLDLKRVNPQGEGVIFYSHRAGGPYYRWRYEERRGEWLCSRMHVGDLVITELVSAPWKEIPATLKSTLDLHYVE
Ga0209818_10005894	3300027637	Agricultural Soil	MKGLRLYLDLKRPDPQGGGLIFYSHRAGGPYYRWRYEALRGEWLCSRMHAGDLVVTELVSAPWKEVPAGLRTTLDLHYVE
Ga0209814_101368672	3300027873	Populus Rhizosphere	MNGLRVYVDLERPAWCAVFYTRRAGGPYYRWRYEERRGEWLYSRMHAADLVVTELVSAPWKEIPAGLRTTLDLHYVE
Ga0209481_101485442	3300027880	Populus Rhizosphere	MQGLRVYVDLKRADSQVGGLIFYSQRAGGPYYRWRFEELRGEWLCSRMHANDLTMRELVSAPWREVPAALKTTLDLHYVE
Ga0209486_100037863	3300027886	Agricultural Soil	MKGLRVYLDSTRADLQGGSLIFYSQRAGGPYYRWRYEEVRGWLCSRMHAGDLTFTQLVSAPWKEIPAGLKTTLDQHYVE
Ga0207428_100710541	3300027907	Populus Rhizosphere	MKGLRIYLCKRTNPLGGGLIFYSQRAGGPCYRWRYEERRGEWLFSRMHAAELTVTELVSAPWKDIPALLKTTLDQHYLE
Ga0207428_102492672	3300027907	Populus Rhizosphere	MQGLKVYFDLKRTDPQVGGLIFYSQRAGGPYYRWRYEELRGEWLCSRMHAGDLAVRELVSAPWKEIPADLKTTLDLHYVE
Ga0209382_101605424	3300027909	Populus Rhizosphere	MQGLRVYVDLKRTDPQVAGLIFYSQRAGGPYYRWRYEELRGEWLCSRMHAGDLTMRELVSAPWKEVPAALKTTLDLHYVE
Ga0209382_102096643	3300027909	Populus Rhizosphere	MQGLRVYVDLKRADPQVGGLIFYSQRAGGPYYRWRYEELRGEWLCSRMHANDLTMRELVSAPWREVPAALKTTLDLHYVE
Ga0268265_117247392	3300028380	Switchgrass Rhizosphere	MQGLRVYLDLTDPQMGGLIFYSQRAGGPYYRWRYEELRGEWLCSRMHAGDLIVSELVSAPWREIPAALKATLNLHYVE
Ga0310813_113949352	3300031716	Soil	MQGLRVYVHLKRADPQVGALIFYSQRAGGPYYRWRYEELRGEWLCSRMHAGDLTVRELVAAPWKEIPAALKSTLDLHYVE
Ga0310900_114237921	3300031908	Soil	RIYLCKRTNPLGGGLIFYSQRAGGPCYRWRYEELRGEWMFSRMHAADLSLTELVTAPWKDIPALLKTTLDQHYLE
Ga0310812_101834481	3300032421	Soil	MQGLRVYVHLKRADPQVGALIFYSQRAGGPYYRWRYEELRGEWLCSRMHAGDLAVRELVSAPWKEIPAALKSTLDL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F053644

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences