Metagenome / Metatranscriptome Family F053641

Basic Information
Family ID	F053641
Family Type	Metagenome / Metatranscriptome
Number of Sequences	141
Average Sequence Length	72 residues
Representative Sequence	ILTEVIGPMAPLVLRDQIEALGESPDNLPEAKLDELISLVGREISDGKLKSKFEESMFQEISNFKRF
Number of Associated Samples	132
Number of Associated Scaffolds	141

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	2.90 %
% of genes near scaffold ends (potentially truncated)	93.62 %
% of genes from short scaffolds (< 2000 bps)	90.07 %
Associated GOLD sequencing projects	130
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.54

Most Common Taxonomy
Group	Bacteria (96.454 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil (8.511 % of family members)
Environment Ontology (ENVO)	Unclassified (36.170 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (34.043 % of family members)

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 58.95% β-sheet: 0.00% Coil/Unstructured: 41.05%
Feature Viewer

Powered by Feature Viewer

Pfam ID	Name	% Frequency in 141 Family Scaffolds
PF17203	sCache_3_2	30.50
PF00672	HAMP	7.80
PF09084	NMT1	7.09
PF13379	NMT1_2	2.84
PF14332	DUF4388	0.71
PF12419	DUF3670	0.71
PF04015	DUF362	0.71
PF13249	SQHop_cyclase_N	0.71
PF03259	Robl_LC7	0.71
PF11239	DUF3040	0.71

COG ID	Name	Functional Category	% Frequency in 141 Family Scaffolds
COG0715	ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component	Inorganic ion transport and metabolism [P]	7.09
COG4521	ABC-type taurine transport system, periplasmic component	Inorganic ion transport and metabolism [P]	7.09
COG2006	Uncharacterized conserved protein, DUF362 family	Function unknown [S]	0.71
COG2018	Predicted regulator of Ras-like GTPase activity, Roadblock/LC7/MglB family	Signal transduction mechanisms [T]	0.71

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	96.45 %
Unclassified	root	N/A	3.55 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	96.45 %
Unclassified	root	N/A	3.55 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	96.45 %
Unclassified	root	N/A	3.55 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	19.86 %
Unclassified	root	N/A	3.55 %

Name	Rank	Taxonomy	Distribution
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	19.86 %
Unclassified	root	N/A	3.55 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	19.86 %
Unclassified	root	N/A	3.55 %

Name	Rank	Taxonomy	Distribution
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	19.15 %
Unclassified	root	N/A	3.55 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	19.15 %
Unclassified	root	N/A	3.55 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000041\|ARcpr5oldR_c017307	All Organisms → cellular organisms → Bacteria	632	Open in IMG/M
3300000044\|ARSoilOldRDRAFT_c015683	All Organisms → cellular organisms → Bacteria	650	Open in IMG/M
3300000550\|F24TB_14760057	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	522	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10013056	All Organisms → cellular organisms → Bacteria	2001	Open in IMG/M
3300000837\|AP72_2010_repI_A100DRAFT_1021973	All Organisms → cellular organisms → Bacteria	896	Open in IMG/M
3300000953\|JGI11615J12901_10214840	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1792	Open in IMG/M
3300000953\|JGI11615J12901_10508965	All Organisms → cellular organisms → Bacteria	1089	Open in IMG/M
3300000956\|JGI10216J12902_103150554	All Organisms → cellular organisms → Bacteria	1011	Open in IMG/M
3300000956\|JGI10216J12902_104677449	All Organisms → cellular organisms → Bacteria	552	Open in IMG/M
3300001431\|F14TB_107397731	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	527	Open in IMG/M
3300001431\|F14TB_109536325	All Organisms → cellular organisms → Bacteria	582	Open in IMG/M
3300003324\|soilH2_10310404	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2347	Open in IMG/M
3300003993\|Ga0055468_10280696	All Organisms → cellular organisms → Bacteria	529	Open in IMG/M
3300003997\|Ga0055466_10090064	All Organisms → cellular organisms → Bacteria	821	Open in IMG/M
3300004157\|Ga0062590_102218712	All Organisms → cellular organisms → Bacteria	575	Open in IMG/M
3300004778\|Ga0062383_10014286	All Organisms → cellular organisms → Bacteria	2689	Open in IMG/M
3300004800\|Ga0058861_11442890	All Organisms → cellular organisms → Bacteria	821	Open in IMG/M
3300005093\|Ga0062594_100994751	All Organisms → cellular organisms → Bacteria	805	Open in IMG/M
3300005183\|Ga0068993_10199955	All Organisms → cellular organisms → Bacteria	694	Open in IMG/M
3300005206\|Ga0068995_10079094	All Organisms → cellular organisms → Bacteria	640	Open in IMG/M
3300005288\|Ga0065714_10115188	All Organisms → cellular organisms → Bacteria	1414	Open in IMG/M
3300005294\|Ga0065705_10179008	All Organisms → cellular organisms → Bacteria	1597	Open in IMG/M
3300005295\|Ga0065707_10809281	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	596	Open in IMG/M
3300005333\|Ga0070677_10014451	All Organisms → cellular organisms → Bacteria	2779	Open in IMG/M
3300005334\|Ga0068869_102083657	All Organisms → cellular organisms → Bacteria	510	Open in IMG/M
3300005338\|Ga0068868_100346279	All Organisms → cellular organisms → Bacteria	1272	Open in IMG/M
3300005366\|Ga0070659_100352530	All Organisms → cellular organisms → Bacteria	1235	Open in IMG/M
3300005441\|Ga0070700_100583782	All Organisms → cellular organisms → Bacteria	873	Open in IMG/M
3300005454\|Ga0066687_10674878	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	614	Open in IMG/M
3300005455\|Ga0070663_100072876	All Organisms → cellular organisms → Bacteria	2504	Open in IMG/M
3300005456\|Ga0070678_101813003	All Organisms → cellular organisms → Bacteria	575	Open in IMG/M
3300005471\|Ga0070698_101431191	All Organisms → cellular organisms → Bacteria	642	Open in IMG/M
3300005535\|Ga0070684_101669384	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	601	Open in IMG/M
3300005546\|Ga0070696_101992478	All Organisms → cellular organisms → Bacteria	504	Open in IMG/M
3300005586\|Ga0066691_10277162	All Organisms → cellular organisms → Bacteria	987	Open in IMG/M
3300005874\|Ga0075288_1001701	All Organisms → cellular organisms → Bacteria	2831	Open in IMG/M
3300005876\|Ga0075300_1054986	All Organisms → cellular organisms → Bacteria	579	Open in IMG/M
3300005981\|Ga0081538_10234935	All Organisms → cellular organisms → Bacteria	712	Open in IMG/M
3300006031\|Ga0066651_10764121	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	522	Open in IMG/M
3300006797\|Ga0066659_11075444	All Organisms → cellular organisms → Bacteria	672	Open in IMG/M
3300006806\|Ga0079220_10746433	All Organisms → cellular organisms → Bacteria	729	Open in IMG/M
3300006847\|Ga0075431_100410703	All Organisms → cellular organisms → Bacteria	1354	Open in IMG/M
3300006847\|Ga0075431_101296079	All Organisms → cellular organisms → Bacteria	689	Open in IMG/M
3300006871\|Ga0075434_100969512	All Organisms → cellular organisms → Bacteria	864	Open in IMG/M
3300006880\|Ga0075429_100346366	All Organisms → cellular organisms → Bacteria	1301	Open in IMG/M
3300006894\|Ga0079215_11031463	All Organisms → cellular organisms → Bacteria	608	Open in IMG/M
3300006904\|Ga0075424_102061188	All Organisms → cellular organisms → Bacteria	601	Open in IMG/M
3300007258\|Ga0099793_10683087	All Organisms → cellular organisms → Bacteria	517	Open in IMG/M
3300009053\|Ga0105095_10607771	All Organisms → cellular organisms → Bacteria	609	Open in IMG/M
3300009081\|Ga0105098_10650318	All Organisms → cellular organisms → Bacteria	554	Open in IMG/M
3300009162\|Ga0075423_10957205	All Organisms → cellular organisms → Bacteria	909	Open in IMG/M
3300009167\|Ga0113563_11085404	All Organisms → cellular organisms → Bacteria	926	Open in IMG/M
3300009179\|Ga0115028_10518832	All Organisms → cellular organisms → Bacteria	870	Open in IMG/M
3300010036\|Ga0126305_10624438	All Organisms → cellular organisms → Bacteria	725	Open in IMG/M
3300010042\|Ga0126314_11455086	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	515	Open in IMG/M
3300010047\|Ga0126382_11336658	All Organisms → cellular organisms → Bacteria	650	Open in IMG/M
3300010047\|Ga0126382_12240598	All Organisms → cellular organisms → Bacteria	526	Open in IMG/M
3300010166\|Ga0126306_11339781	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	591	Open in IMG/M
3300010358\|Ga0126370_10881742	All Organisms → cellular organisms → Bacteria	806	Open in IMG/M
3300010399\|Ga0134127_11008172	All Organisms → cellular organisms → Bacteria	893	Open in IMG/M
3300010403\|Ga0134123_11582087	All Organisms → cellular organisms → Bacteria	702	Open in IMG/M
3300010868\|Ga0124844_1115371	All Organisms → cellular organisms → Bacteria	1024	Open in IMG/M
3300011402\|Ga0137356_1079467	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	624	Open in IMG/M
3300011442\|Ga0137437_1219617	All Organisms → cellular organisms → Bacteria	660	Open in IMG/M
3300011443\|Ga0137457_1296087	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	552	Open in IMG/M
3300011444\|Ga0137463_1329384	All Organisms → cellular organisms → Bacteria	553	Open in IMG/M
3300012034\|Ga0137453_1078800	All Organisms → cellular organisms → Bacteria	636	Open in IMG/M
3300012038\|Ga0137431_1003065	All Organisms → cellular organisms → Bacteria	4902	Open in IMG/M
3300012134\|Ga0137330_1031431	All Organisms → cellular organisms → Bacteria	680	Open in IMG/M
3300012211\|Ga0137377_10282293	All Organisms → cellular organisms → Bacteria	1593	Open in IMG/M
3300012231\|Ga0137465_1096954	All Organisms → cellular organisms → Bacteria	884	Open in IMG/M
3300012355\|Ga0137369_10009659	All Organisms → cellular organisms → Bacteria	9550	Open in IMG/M
3300012912\|Ga0157306_10306077	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	585	Open in IMG/M
3300012925\|Ga0137419_11093082	All Organisms → cellular organisms → Bacteria	664	Open in IMG/M
3300012927\|Ga0137416_11078117	All Organisms → cellular organisms → Bacteria	720	Open in IMG/M
3300012972\|Ga0134077_10130312	All Organisms → cellular organisms → Bacteria	992	Open in IMG/M
3300012976\|Ga0134076_10528919	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	542	Open in IMG/M
3300013100\|Ga0157373_11468718	Not Available	520	Open in IMG/M
3300013102\|Ga0157371_10551241	All Organisms → cellular organisms → Bacteria	855	Open in IMG/M
3300013296\|Ga0157374_11063479	All Organisms → cellular organisms → Bacteria	829	Open in IMG/M
3300014315\|Ga0075350_1020726	All Organisms → cellular organisms → Bacteria	1249	Open in IMG/M
3300014745\|Ga0157377_10470305	All Organisms → cellular organisms → Bacteria	872	Open in IMG/M
3300014867\|Ga0180076_1029424	All Organisms → cellular organisms → Bacteria	932	Open in IMG/M
3300014872\|Ga0180087_1111138	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	524	Open in IMG/M
3300014883\|Ga0180086_1031036	All Organisms → cellular organisms → Bacteria	1236	Open in IMG/M
3300015241\|Ga0137418_10426173	All Organisms → cellular organisms → Bacteria	1077	Open in IMG/M
3300015258\|Ga0180093_1161286	All Organisms → cellular organisms → Bacteria	569	Open in IMG/M
3300015372\|Ga0132256_101581400	All Organisms → cellular organisms → Bacteria	766	Open in IMG/M
3300015372\|Ga0132256_102907892	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	576	Open in IMG/M
3300016371\|Ga0182034_10150597	All Organisms → cellular organisms → Bacteria	1747	Open in IMG/M
3300016422\|Ga0182039_11188449	All Organisms → cellular organisms → Bacteria	689	Open in IMG/M
3300017997\|Ga0184610_1151914	All Organisms → cellular organisms → Bacteria	760	Open in IMG/M
3300018028\|Ga0184608_10149404	All Organisms → cellular organisms → Bacteria	1006	Open in IMG/M
3300018032\|Ga0187788_10419325	All Organisms → cellular organisms → Bacteria	565	Open in IMG/M
3300018051\|Ga0184620_10317893	All Organisms → cellular organisms → Bacteria	526	Open in IMG/M
3300018063\|Ga0184637_10384424	All Organisms → cellular organisms → Bacteria	839	Open in IMG/M
3300018082\|Ga0184639_10536910	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	583	Open in IMG/M
3300018429\|Ga0190272_11112142	All Organisms → cellular organisms → Bacteria	767	Open in IMG/M
3300018466\|Ga0190268_10382418	All Organisms → cellular organisms → Bacteria	895	Open in IMG/M
3300018466\|Ga0190268_11581979	All Organisms → cellular organisms → Bacteria	576	Open in IMG/M
3300019879\|Ga0193723_1060487	All Organisms → cellular organisms → Bacteria	1103	Open in IMG/M
3300020020\|Ga0193738_1110393	All Organisms → cellular organisms → Bacteria	778	Open in IMG/M
3300021073\|Ga0210378_10058347	All Organisms → cellular organisms → Bacteria	1518	Open in IMG/M
3300022563\|Ga0212128_10684511	All Organisms → cellular organisms → Bacteria	616	Open in IMG/M
3300025893\|Ga0207682_10180675	All Organisms → cellular organisms → Bacteria	964	Open in IMG/M
3300025931\|Ga0207644_11649165	Not Available	538	Open in IMG/M
3300025936\|Ga0207670_10942281	All Organisms → cellular organisms → Bacteria	724	Open in IMG/M
3300025959\|Ga0210116_1012106	All Organisms → cellular organisms → Bacteria	1565	Open in IMG/M
3300025971\|Ga0210102_1101328	All Organisms → cellular organisms → Bacteria	621	Open in IMG/M
3300025972\|Ga0207668_10558114	All Organisms → cellular organisms → Bacteria	993	Open in IMG/M
3300025986\|Ga0207658_10205125	All Organisms → cellular organisms → Bacteria	1648	Open in IMG/M
3300026028\|Ga0208420_1026251	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	513	Open in IMG/M
3300026053\|Ga0208422_1007180	All Organisms → cellular organisms → Bacteria	1248	Open in IMG/M
3300026492\|Ga0256802_1057650	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	556	Open in IMG/M
3300026894\|Ga0207980_1004956	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	831	Open in IMG/M
3300027364\|Ga0209967_1026964	All Organisms → cellular organisms → Bacteria	853	Open in IMG/M
3300027424\|Ga0209984_1009661	All Organisms → cellular organisms → Bacteria	1229	Open in IMG/M
3300027665\|Ga0209983_1017128	All Organisms → cellular organisms → Bacteria	1498	Open in IMG/M
3300027815\|Ga0209726_10136012	All Organisms → cellular organisms → Bacteria	1401	Open in IMG/M
3300031081\|Ga0308185_1056148	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	514	Open in IMG/M
(restricted) 3300031150\|Ga0255311_1105666	All Organisms → cellular organisms → Bacteria	611	Open in IMG/M
3300031469\|Ga0170819_11498198	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	586	Open in IMG/M
3300031573\|Ga0310915_10400019	All Organisms → cellular organisms → Bacteria	975	Open in IMG/M
3300031852\|Ga0307410_10583869	All Organisms → cellular organisms → Bacteria	930	Open in IMG/M
3300031854\|Ga0310904_10104329	All Organisms → cellular organisms → Bacteria	1565	Open in IMG/M
3300031890\|Ga0306925_12233479	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	508	Open in IMG/M
3300031954\|Ga0306926_10141907	All Organisms → cellular organisms → Bacteria	2973	Open in IMG/M
3300032012\|Ga0310902_11173076	All Organisms → cellular organisms → Bacteria	540	Open in IMG/M
3300032013\|Ga0310906_11214906	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	549	Open in IMG/M
3300032157\|Ga0315912_11250386	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	587	Open in IMG/M
3300032180\|Ga0307471_100034635	All Organisms → cellular organisms → Bacteria	3949	Open in IMG/M
3300032828\|Ga0335080_11020829	All Organisms → cellular organisms → Bacteria	841	Open in IMG/M
3300033475\|Ga0310811_10263301	All Organisms → cellular organisms → Bacteria	2027	Open in IMG/M
3300033481\|Ga0316600_11218060	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	534	Open in IMG/M
3300034148\|Ga0364927_0040039	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1195	Open in IMG/M
3300034149\|Ga0364929_0141064	All Organisms → cellular organisms → Bacteria	778	Open in IMG/M
3300034660\|Ga0314781_097452	All Organisms → cellular organisms → Bacteria	588	Open in IMG/M
3300034670\|Ga0314795_117140	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	550	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	78.01%
Host-Associated	Host-Associated	21.99%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	55.32%
Aquatic	Environmental → Aquatic	22.70%
Plants	Host-Associated → Plants	21.28%
Human	Host-Associated → Human	0.71%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	53.90%
Rhizosphere	Host-Associated → Plants → Rhizosphere	14.89%
Sediment	Environmental → Aquatic → Sediment	12.06%
Freshwater	Environmental → Aquatic → Freshwater	5.67%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.67%
Marine	Environmental → Aquatic → Marine	4.26%
Floodplain	Environmental → Terrestrial → Floodplain	1.42%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.71%
Digestive System	Host-Associated → Human → Digestive System	0.71%
Roots	Host-Associated → Plants → Roots	0.71%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	41.13%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	12.06%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	7.80%
Soil	Host-Associated → Plants → Rhizosphere → Soil	7.09%
Loam	Environmental → Terrestrial → Soil → Loam	6.38%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.67%
Wetlands	Environmental → Aquatic → Marine → Wetlands	4.26%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.55%
Sediment	Environmental → Aquatic → Freshwater → Sediment	2.84%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.13%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	1.42%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.42%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.71%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.71%
Sand	Environmental → Terrestrial → Soil → Sand	0.71%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	0.71%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.71%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.71%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	21.99%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	12.06%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	7.80%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	7.09%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	6.38%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.67%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	5.67%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	4.26%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.55%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	3.55%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.55%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.55%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	2.84%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.13%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.42%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	1.42%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.42%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.71%
Contaminated	Environmental → Aquatic → Freshwater → Groundwater → Contaminated	0.71%
Unclassified	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified	0.71%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.71%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.71%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	0.71%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.71%
Unclassified	Host-Associated → Plants → Roots → Rhizosphere → Unclassified	0.71%

Habitat	Taxonomy	Distribution
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	8.51%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.67%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	4.26%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.26%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.26%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	3.55%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.84%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	2.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.84%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	2.13%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.13%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	2.13%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.13%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.13%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	2.13%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.13%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	2.13%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	1.42%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.42%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.42%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.42%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.42%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	1.42%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	1.42%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.42%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.42%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.42%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.42%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.42%
Wetland	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland	0.71%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.71%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	0.71%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.71%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Sediment	0.71%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Contaminated → Groundwater	0.71%
Thermal Springs	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Thermal Springs	0.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.71%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.71%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.71%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.71%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.71%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.71%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.71%
Sandy Soil	Environmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil	0.71%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	0.71%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.71%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.71%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.71%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Unclassified → Tabebuia Heterophylla Rhizosphere	0.71%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.71%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000041	Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample from Arabidopsis cpr5 old rhizosphere	Host-Associated	Open in IMG/M
3300000044	Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample from Arabidopsis soil old	Host-Associated	Open in IMG/M
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental	Open in IMG/M
3300000793	Forest soil microbial communities from Amazon forest - 2010 replicate II A001	Environmental	Open in IMG/M
3300000837	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A100	Environmental	Open in IMG/M
3300000953	Soil microbial communities from Great Prairies - Kansas Corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300003324	Sugarcane bulk soil Sample H2	Environmental	Open in IMG/M
3300003993	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D2	Environmental	Open in IMG/M
3300003997	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004778	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare3Fresh	Environmental	Open in IMG/M
3300004800	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005183	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqC_D1	Environmental	Open in IMG/M
3300005206	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqB_D2	Environmental	Open in IMG/M
3300005288	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005333	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG	Host-Associated	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005874	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_404	Environmental	Open in IMG/M
3300005876	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_80N_401	Environmental	Open in IMG/M
3300005981	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1	Host-Associated	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009053	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009081	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009167	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG - Illumina Assembly (version 2)	Environmental	Open in IMG/M
3300009179	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_0915_D1	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300010868	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (PacBio error correction)	Environmental	Open in IMG/M
3300011402	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT830_2	Environmental	Open in IMG/M
3300011442	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT138_2	Environmental	Open in IMG/M
3300011443	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT630_2	Environmental	Open in IMG/M
3300011444	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT800_2	Environmental	Open in IMG/M
3300012034	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT526_2	Environmental	Open in IMG/M
3300012038	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT800_2	Environmental	Open in IMG/M
3300012134	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT142_2	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012231	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT828_2	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012912	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S163-409C-2	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300014315	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_TuleC_D1	Environmental	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014867	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT433_16_10D	Environmental	Open in IMG/M
3300014872	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT790_16_10D	Environmental	Open in IMG/M
3300014883	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT760_16_10D	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015258	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT45_16_1Da	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017997	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coex	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018032	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP10_20_MG	Environmental	Open in IMG/M
3300018051	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1	Environmental	Open in IMG/M
3300018063	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2	Environmental	Open in IMG/M
3300018082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b2	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300019879	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m2	Environmental	Open in IMG/M
3300020020	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2a1	Environmental	Open in IMG/M
3300021073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redo	Environmental	Open in IMG/M
3300022563	OV2_combined assembly	Environmental	Open in IMG/M
3300025893	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025959	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqB_D2 (SPAdes)	Environmental	Open in IMG/M
3300025971	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqC_D2 (SPAdes)	Environmental	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026028	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailB_D2 (SPAdes)	Environmental	Open in IMG/M
3300026053	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqA_D1 (SPAdes)	Environmental	Open in IMG/M
3300026492	Sediment microbial communities from tidal freshwater marsh on Altamaha River, Georgia, United States - 10-16 CS5	Environmental	Open in IMG/M
3300026894	Soil and rhizosphere microbial communities from Laval, Canada - mgLPA (SPAdes)	Environmental	Open in IMG/M
3300027364	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co AM (SPAdes)	Host-Associated	Open in IMG/M
3300027424	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 S PM (SPAdes)	Host-Associated	Open in IMG/M
3300027665	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S PM (SPAdes)	Host-Associated	Open in IMG/M
3300027815	Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW46 contaminated, 5.4 m (SPAdes)	Environmental	Open in IMG/M
3300031081	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_159 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031150 (restricted)	Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH4_T0_E4	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031852	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3	Host-Associated	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032012	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032157	Garden soil microbial communities collected in Santa Monica, California, United States - V. faba soil	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M
3300033481	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day5_CT	Environmental	Open in IMG/M
3300034148	Sediment microbial communities from East River floodplain, Colorado, United States - 18_j17	Environmental	Open in IMG/M
3300034149	Sediment microbial communities from East River floodplain, Colorado, United States - 20_j17	Environmental	Open in IMG/M
3300034660	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60R2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034670	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8R4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
ARcpr5oldR_0173072	3300000041	Arabidopsis Rhizosphere	PAALLSRVTSILTEVMGPMAPLVLRDQIEALGESPNSLPESKLDELIVLIGREITDSKIKNKFEESMFQEISNFKRF*
ARSoilOldRDRAFT_0156832	3300000044	Arabidopsis Rhizosphere	DLVPAALLSRVTSILTEVMGPMAPLVLRDQIEALGESPNSLPESKLDELIVLIGREITDSKIKNKFEESMFQEISNFKRF*
F24TB_147600571	3300000550	Soil	PAALLSRVTSILTEVMGPMAPLVLRDQIEALGESPNSLPESKLDELIVLIGREISDSKIKNKFEESMFQEISNFKRF*
AF_2010_repII_A001DRAFT_100130561	3300000793	Forest Soil	MGPMAPMVLGDQIQTLRESQDAFPEAKLDELIGLLSREISDGKLRNKFEELVFQEISNFKKF*
AP72_2010_repI_A100DRAFT_10219731	3300000837	Forest Soil	ILTDIIGPMAPMVLGDLIQTLGESQDAFPEAKLDELIGLLSREISDGKLRNKFEELVFQEISNFKKF*
JGI11615J12901_102148403	3300000953	Soil	VTAPVKPVGEVVPTALLERLSTILTEVIGPMAPLVMRDQIELLGASTTTLPEAKLDDLITLIGKEISDPKQRNKFEETSYQEISNFKRF*
JGI11615J12901_105089652	3300000953	Soil	MGPMAPLVLRDQIEALGESAETFPEAKLDELLTLIGREISDSKLKQKFEESMFQEISNFKRF*
JGI10216J12902_1031505542	3300000956	Soil	APEKPVADLVPTALLDSLSSILIEVIGPMAPLVVHDQIKALGASHDSLPEAKLEDLIGLIGKEISDIKLRKKFEESIYQEISNFKRF*
JGI10216J12902_1046774491	3300000956	Soil	VLRDQIESLGESTEAFPEAKLDELLTLVAREISDSKLKQKFEESMFQEISNFKRF*
F14TB_1073977311	3300001431	Soil	AVPVAKAVVDLVPAALLSRVTSILTEVMGPMAPLVLRDQIEALGESPNXXXXXKLDELIVLIGREISDSKIKNKFEESMFQEISNFKRF*
F14TB_1095363252	3300001431	Soil	SILTEVIGPMAPLVLRDQIEALGESPDNLPEAKLDELISLVGREISDGKLKSKFEESMFQEISNFKRF*
soilH2_103104043	3300003324	Sugarcane Root And Bulk Soil	VLRDQIEALGASPDNLPESKLDELVVLIGGEISDSKLKHKFEESMFQEISNFKRF*
Ga0055468_102806962	3300003993	Natural And Restored Wetlands	QIESLSEAQDSFPETKLDELIGLISKEISDGKLRNKFEESMLQEISNFKKL*
Ga0055466_100900641	3300003997	Natural And Restored Wetlands	PALLARVTSILTEVLGPMAPLVLRDQIEALGESPDSLPEEKLDDLIMLIGKEIGDGQLKNKFEESMFQEISNFKRF*
Ga0062590_1022187122	3300004157	Soil	VMRDQIEALGASTTTLPEAKLDDLITLIGKEISDPRQRNKFEETSYQEISNFKRF*
Ga0062383_100142863	3300004778	Wetland Sediment	TAPAKPVSDVVPRALLDRLSTILTEVLGPMAPLVMRDQVESLGATADSLPEAKLDDLIGLIGKEISDTKQRNKFEESIYQEISNFKRF*
Ga0058861_114428902	3300004800	Host-Associated	MAPLVLRDQIEALGESAEAFPEAKLDELLTLVGREISDGKLKQKFEESIFQEISNFKRF*
Ga0062594_1009947512	3300005093	Soil	DMIGPMAPLVLRDQIESLGGSADSLPESKLDELITLIGQEISDGKLKSRFEESMVQEIANFKRF*
Ga0068993_101999552	3300005183	Natural And Restored Wetlands	LLNRLTGILMEVIGPMAPLVLRDQLKALGATTSNLPQAKLDDLIMLVSLEISDSKVKKKFEETMSQEIANFRRY*
Ga0068995_100790942	3300005206	Natural And Restored Wetlands	LDRLSVILTDVIGPMAPLVLRDQVEALGATSDSLPETKLDDLIGLIGKEISDTKQRNKFEESIYQEISNFKRF*
Ga0065714_101151883	3300005288	Miscanthus Rhizosphere	IVSSALLNRLTIILTEVMGPMAPLVLRDQIDGLGESAETFPEAKLDELLTLIGREISDNKLKQKFEESMFQEISNFKRF*
Ga0065705_100055641	3300005294	Switchgrass Rhizosphere	QIDSLGESQDNFPEAKLDDLIGLISKEISDGKLRQKVEESMLQEISNFKKF*
Ga0065705_101790081	3300005294	Switchgrass Rhizosphere	PMAPLVLRDQIDSLGESQDNFPEAKLEDLIGLISKEISDGKLRQKVEESMLQEISNFKKF
Ga0065707_101590951	3300005295	Switchgrass Rhizosphere	QIDSLGESQDNFPEAKLEDLIGLISKEISDGKLRQKVEESMLQEISNFKKF*
Ga0065707_108092811	3300005295	Switchgrass Rhizosphere	KPVREIVSSALLNRLTIILTEVMGPMAPLVLRDQIDGLGESAETFPEAKLDELLTLIGREISDNKLKQKFEESMFQEISNFKRF*
Ga0070677_100144511	3300005333	Miscanthus Rhizosphere	SALLNRLKIILTEVMGPMAPLVLRDQIEALGESAEAFPEAKLDELLTLVGREISDGKLKQKFEESMFQEISNFKRF*
Ga0068869_1020836571	3300005334	Miscanthus Rhizosphere	KVVREVVSSALLNRLKIILTEVMGPMAPLVLRDQIEALGESAEAFPEAKLDELLTLVGREISDGKLKQKFEESMFQEISNFKRF*
Ga0068868_1003462791	3300005338	Miscanthus Rhizosphere	EPAPTAGKVVREVVSSALFNRLKIILTEVMGPMAPLVLRDQIEALGESAEAFPEAKLDELLTLVGREISDGKLKQKFEESMFQEISNFKRF*
Ga0070659_1003525301	3300005366	Corn Rhizosphere	AAAVKPVREIVSSALLNRLTIILTEVMGPMAPLVLRDQIDGLGESAETFPEAKLDELLTLIGREISDNKLKQKFEESMFQEISNFKRF*
Ga0070700_1005837821	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MAPLVLRDQIEALGESRDRFPESKLDDLITLISREIADGKLKNRFEESMFQEISNFKQF*
Ga0066687_106748782	3300005454	Soil	SDLVPPALLNHVTSVLTEVMGPMAPLVLRDQIDALGESPDKFPESKLDDLIMLIGREISDGKLKNKFEESMFQEISNFKRF*
Ga0070663_1000728763	3300005455	Corn Rhizosphere	KPVREVVSSALLNRLTIILTEVMGPMAPLVLRDQIDGLGESAETFPEAKLDELLTLIGREISDNKLKQKFEESMFQEISNFKRF*
Ga0070678_1018130032	3300005456	Miscanthus Rhizosphere	REVVSSALLNRLTIILTEVMGPMAPLVLRDQIDGLGESAETFPEAKLDELLTLIGREISDNKLKQKFEESMFQEISNFKRF*
Ga0070698_1014311912	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	RDQIEALGESPDNLPEAKLDELISLVGREISDGKLKSKFEESMFQEISNFKRF*
Ga0070684_1016693841	3300005535	Corn Rhizosphere	LNRLKIILTEVMGPMAPLVLRDQIEALGESAEAFPEAKLDELLTLVGREISDGKLKQKFEESMFQEISNFKRF*
Ga0070696_1019924781	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	KRVTTILTEIMGPMAPLVLRDQIEALGESPESLPESKLDELIALVGREISDGRVKAKFEESMFQEISNFKRF*
Ga0066691_102771622	3300005586	Soil	PALLKRVTTILTEIMGPMAPLVLRDQIEALGESPESLPESKLDELIALVGREISDGRVKAKFEESMFQEISNFKRF*
Ga0075288_10017015	3300005874	Rice Paddy Soil	EVIGPMAPLVLRDQIEALGESPDSLPEAKLDELITLIGREIGNGSLKKKFEESMLQEISNFKRF*
Ga0075300_10549861	3300005876	Rice Paddy Soil	GILTEVIGPMAPLVLRDQIEALGESADSLPEAKLDELITLIGREIGNGSLKNKFEQSMLQEISNFKRF*
Ga0081538_102349352	3300005981	Tabebuia Heterophylla Rhizosphere	PSSRLTADVVPRSVFDRLTSILTEMMGPMASVVLRDQIDSLGESQGNFPESKLEELIGLISKEISDGKLRHKFEEAILQEISDFKKF*
Ga0066651_107641212	3300006031	Soil	HVTSILTEVMGPMAPLVLRDQIDALGESPDKFPESKLDDLIMLIGREISDGKLKNKFEESMFQEISNFKRF*
Ga0066659_110754442	3300006797	Soil	APTPKTAAEIVPPVLINRLSSILTDMIGPMAPFVLQDQIQWLGESHDSFPEAKLDELIGLISREISDGKLRNKFEEHVFQEISNFKKF*
Ga0079220_107464331	3300006806	Agricultural Soil	AGKPVREVVSSALLNRLTIILTEVMGPMAPLVLRDQIDSLGECAETFPEAKLDELLTLIGREISDNKLKQKFEESMFQEISNFKRF*
Ga0075431_1004107033	3300006847	Populus Rhizosphere	ALLSRVTSILTEVMGPMAPLVLRDQIEALGESPNSLPESKLDELIVLIGREISDSKIKNKFEESMFQEISNFKRF*
Ga0075431_1012960792	3300006847	Populus Rhizosphere	PLVLRDQIEALGESRDSFPESKLDDLITLISREIADGKLKNHFEESMFQEISNFKQF*
Ga0075434_1009695122	3300006871	Populus Rhizosphere	LRDQIDNLGESQDNFPETKLDDLIGLISKEISDGKLRQKVEESMLQEISNFKKF*
Ga0075429_1003463661	3300006880	Populus Rhizosphere	ASILTEVIGPMAPLVLRDQIEALGESPDNLPEAKLDELISLVGREISDGKLKSKFEESMFQEISNFKRF*
Ga0079215_110314632	3300006894	Agricultural Soil	GLVELVAASSRPAVDVVPPALFDRLTSILTEMIGPMASLVLRDQIDSFGESQDSFPESKLDELIGLVSREISDGKLRSKFEGSMQQEISNFKKF*
Ga0075424_1020611882	3300006904	Populus Rhizosphere	ALLSRVTSILTEVMGPMAPLVLRDQIEALGESPTSLPESKLDELIVLIGREISDSKLKNKFEESMFQEISNFKRF*
Ga0099793_106830872	3300007258	Vadose Zone Soil	VLRDQIEALGESPESLPESKLDELIALVGREISDGRVKVKFEESMFQEISNFKRF*
Ga0105095_106077712	3300009053	Freshwater Sediment	VIGPMAPLVLRDQIEALGESPDSLPETKLDELVTLIAREISDGKLKNRFEESMFQEIANFKRL*
Ga0105098_106503182	3300009081	Freshwater Sediment	FAYTAKVIFNLHKSGLVEIVNPSSRLTADVVPSSVFHRLTSILTEVMGPMASVVLRDQIDGLGESQENFPESKLEELIGLISKEISDGKLRHKFEEAMLQEISDFKKF*
Ga0075423_109572051	3300009162	Populus Rhizosphere	PLVLRDQIDGLGESAETFPEAKLDELLTLIGREISDNKLKQKFEESMFQEISNFKRF*
Ga0113563_110854041	3300009167	Freshwater Wetlands	DLVPAALLDRLSVTLTEVIGPMAPLVMRDQIEALGATSDSLPEAKLDELIGLIGKEFTDIKQRNKFEESIYQEISNFKRF*
Ga0115028_105188322	3300009179	Wetland	RDQIEALGATSDSLPEAKLDELIGLIGKEFTDIKQRNKFEESIYQEISNFKRF*
Ga0126305_106244381	3300010036	Serpentine Soil	GLIEAVTETSKAVGELVPAPLLDRLSTILTEVIGPMAPLVMRDQIQTLGASTDSLPETKLDELISLIGKEISDTKQRNKFEESAYQEISIYKRF*
Ga0126314_114550861	3300010042	Serpentine Soil	PLLDRLSTILTEVIGPMAPLVMRDQIQTLGASTDSLPETKLDELISLIGKEISDTKQRNKFEESAYQEISIYKRF*
Ga0126382_113366581	3300010047	Tropical Forest Soil	PLVLRDQIKSLGEWPDYFPEAKLDDLIVLVGLELGDSKLKKRFEESVYHEIANFKRL*
Ga0126382_122405981	3300010047	Tropical Forest Soil	DQIDSLGESQDNFPEAKLDDLIGLISKEISDGKLRQKVEESMLQEISNFKKF*
Ga0126306_113397812	3300010166	Serpentine Soil	AVGELVPAPLLDRLSTILTEVIGPMAPLVMRDQIQTLGASTDSLPETKLDELISLIGKEISDTKQRNKFEESAYQEISIYKRF*
Ga0126370_108817422	3300010358	Tropical Forest Soil	VPPVLLNRLSSILTDMIGPMAPVVLRDQIQVLGESLDNFPETKLDELIGLVSREISDGKLRNKFEELVFQEISNFNKKF*
Ga0134127_110081721	3300010399	Terrestrial Soil	TDMIGPMAPLVLRDQIESLGESADSLPESKLEELITLIGQEISDGKLKSRFEESMVQEIANFKRF*
Ga0134123_115820872	3300010403	Terrestrial Soil	LLERLSTILTEVIGPMAPLVMRDQIELLGASTTTLPEAKLDDLITLIGKEISDPKQRNKFEETSYQEISNFKRF*
Ga0124844_11153711	3300010868	Tropical Forest Soil	MAPLVLRDQIDSLGESQDNFPEAKLDDLIGLISKEISDGKLRQKVEESMLEEISNFKKF*
Ga0137356_10794672	3300011402	Soil	FNLHKSGLVEIVNPSSRLAADLVPPALFDRLRSILTEVMGPMAPLVLRDQIDSLAESQDSFPESKLDELIGLISKEISDGKLRNKFEESMLQEISNFKKL*
Ga0137437_12196171	3300011442	Soil	EAVTTPVKPVGDLVPAALLDRLSVILIDIIGPMAPLVLRDQVEALGATSDSLPETKLDDLIGLIGKEISDTKQRNKFEESIYQEISNFKRF*
Ga0137457_12960871	3300011443	Soil	PVVDIVPPALLTRVTGILTEVMGPMAPLVLRDQIEALGESRDRFPESKLDDLITLISREIADGKLKNRFEESMFQEISNFKQF*
Ga0137463_13293842	3300011444	Soil	VLRDQIEALGESPNSLPESKLDELIVLIGREITDSKIKNKFEESMFQEISNFKRF*
Ga0137453_10788001	3300012034	Soil	SILIEVIGPMAPLVVHDQVKALGASLDSLPESRLDDLISLIGKEISDTKLRNKFEESMYQEISNFKRF*
Ga0137431_10030656	3300012038	Soil	EVMGPMAPLVLRDQIDSLAESQDSFPESKLDELIGLISKEISDGKLRNKFEESMLQEISNFKKL*
Ga0137330_10314311	3300012134	Soil	IEALGATSDSLPEAKLDELIGLIGKEFSDIKQRNKFEESIYQEISNFKRF*
Ga0137377_102822933	3300012211	Vadose Zone Soil	LRDQIDSLGESQDNFPESKLDDLIGLISKEISDGKLRQKVEESMLQEISNFKKF*
Ga0137465_10969542	3300012231	Soil	TEVIGPMAPLVMRDQIEALGATSDSLPEAKLDELIGLIGKEFSDIKQRNKFEESIYQEISNFKRF*
Ga0137369_100096591	3300012355	Vadose Zone Soil	PLVLRDQIEALGESPDNLPEAKLDELISLVGREISDGKLKSKFEESMFQEISNFKRF*
Ga0157306_103060772	3300012912	Soil	SSALLNRLKIILTEVMGPMAPLVLRDQIEALGESAEAFPEAKLDELLTLVGREISDGKLKQKFEESMFQEISNFKRF*
Ga0137419_110930821	3300012925	Vadose Zone Soil	LLSRVTSILTEVMGPMAPLVLRDQIEALGESPNSLPESKLDELIVLIGREITDSKIKNKFEESMFQEISNFKRF*
Ga0137416_110781172	3300012927	Vadose Zone Soil	EAAAPVAKTVVDLVPAALLSRVTSILTEVMGPMAPLVLRDQIEALGESPNSLPESKLDELIVLIGREITDSKIKNKFEESMFQEISNFKRF*
Ga0126375_108839961	3300012948	Tropical Forest Soil	QIDSLGESQDNFPEAKLDDLIGLISKEISDGKLRQKVEESMLEEISNFKKF*
Ga0134077_101303122	3300012972	Grasslands Soil	GPMAPLVLRDQIEALGESPENLPEAKLDELISLVGREISDGKLKSKFEESMFQEISNFKRF*
Ga0134076_105289191	3300012976	Grasslands Soil	ILTEVIGPMAPLVLRDQIEALGESPDNLPEAKLDELISLVGREISDGKLKSKFEESMFQEISNFKRF*
Ga0157373_114687182	3300013100	Corn Rhizosphere	PVLLSRLSTILTDIIGPMAPFVLEDQIQSLNESSESFPEAKLDELIGLVGREISDTNRRNKFEEQVFQEISNFKRF*
Ga0157371_105512412	3300013102	Corn Rhizosphere	REVVSSALLNRLKIILTEVMGPMAPLVLRDQIEALGESAEAFPEAKLDELLTLVGREISDGKLKQKFEESMFQEISNFKRF*
Ga0157374_110634791	3300013296	Miscanthus Rhizosphere	AAAAVKPVRYIVSSALLNRLTIILTEVMGPMAPLVLRDQIDGLGESAETFPEAKLDELLTLIGREISDNKLKQKFEESMFQEISNFKRF*
Ga0075350_10207263	3300014315	Natural And Restored Wetlands	PMAPLVMRDQIEALGATSDSLPEAKLDELIGLIGKEISDTKQRNKLEESIYHEISNFKRF
Ga0157377_104703051	3300014745	Miscanthus Rhizosphere	LRDQIEALGESAEAFPEAKLDELLTLVGREISDGKLKQKFEESMFQEISNFKRF*
Ga0180076_10294241	3300014867	Soil	VEIVNPSSRLAADLVPPALFDRLRSILTEVMGPMAPLVLRDQIDSLAESQDSFPESKLDELIGLISKEISDGKLRNKFEESMLQEISNFKKL*
Ga0180087_11111381	3300014872	Soil	SGLVEIVNPSSRLAADLVPPALFDRLRSILTEVMGPMAPLVLRDQIDSLAESQDSFPESKLDELIGLISKEISDGKLRNKFEESMLQEISNFKKL*
Ga0180086_10310363	3300014883	Soil	VKALGASLDSLPESRLDDLIGLIGKEISDSKLRNKFEESIYQEISNFKRF*
Ga0137418_104261731	3300015241	Vadose Zone Soil	RVTSILTEVMGPMAPLVLRDQIEALGESPNSLPESKLDELIVLIGREITDSKIKNKFEESMFQEISNFKRF*
Ga0180093_11612862	3300015258	Soil	LVMRDQIEALGATSDSLPEAKLDELIGLIGKEFTDIKQRNKFEESIYQEISNFKRF*
Ga0132256_1015814001	3300015372	Arabidopsis Rhizosphere	SALLNRLTIILTEVMGPMAPLVLRDQINGLGESAETFPEAKLDELLTLIGREISDNKLKQKFEESMFQEISNFKRF*
Ga0132256_1029078921	3300015372	Arabidopsis Rhizosphere	LLNRLTIILTEVMGPMAPLVLRDQIDGLGESAETFPEAKLDELLTLIGREISDNKLKQKFEESMFQEISNFKRF*
Ga0182034_101505971	3300016371	Soil	KVIFNLHKSGLVGIVNPSSRPLGDVVPAPLFERLTSILTEVMGPMAPLVLRDQMDSLGESQENFPESKLDELIGLISREISDGKLRNKFEESMLQEISNFKKF
Ga0182039_111884491	3300016422	Soil	MAPLVLRDQMDSLGESQENFPESKLDELIGLISREISDGKLRNKFEESMLQEISNFKKF
Ga0184610_11519142	3300017997	Groundwater Sediment	AASIAKPVDDMVPPALLTRVATILTEVIGPIAPLVLRDQIVAMGESPDNLPEAKLDELISLVGREISDGKLKSKFEESMFQEISNFKRF
Ga0184608_101494042	3300018028	Groundwater Sediment	EVIGPMAPLVLRDQIETLGASLETLPEAKLDELVALISREISDGRLKNKFEESMFQEISNFKRF
Ga0187788_104193252	3300018032	Tropical Peatland	PMAPLVLRDQISTLGESPDNFPEAKLDDLIGLISKEISDGKLRQKVEESLLQEISNFKRF
Ga0184620_103178932	3300018051	Groundwater Sediment	DQIEALGESPNSLPESKLDELIVLIGREITDSKIKNKFEESMFQEISNFKRF
Ga0184637_103844242	3300018063	Groundwater Sediment	EPAASIAKPVADMVPSALLSRVATILTEVIGPIAPLVLRDQIVALGESPDNLPEAKLDELISLVGREISDGKLKSKFEESMFQEISNFKRF
Ga0184639_105369102	3300018082	Groundwater Sediment	AAPEPVVDLVPQALLNRLTDILTEVIGPMAPLVLRDQLKALGVTANNLPEAKLDDLIMLVSLEIADGKLKKKFAATMSQEIANFKRF
Ga0190272_111121422	3300018429	Soil	VPPALLDTLSSILIEVIGPMAPLVVHDQVKALGASLDNLPESKLDDLIGLIAKEISDIKLRKKFEESIYQEISNFKRF
Ga0190268_103824182	3300018466	Soil	ADLVPTALLDSLSSILIEVIGPMAPLVVHDQIKALGASHDSLPEAKLEDLIGLIGKEISDIKLRKKFEESIYQEISNFKRF
Ga0190268_115819792	3300018466	Soil	GPMAPLVVHDQVKALGASFDNLPESKLDELVGLIGKEISDIKLRNKFEESIYQEISNFKR
Ga0193723_10604871	3300019879	Soil	PVAKAVGDLVPAALLSRVTSILTEVMGPMAPLVLRDQIEALGESPNSLPESKLDELIVLIGREITDSKIKNKFEESMFQEISNFKRF
Ga0193738_11103932	3300020020	Soil	PMAPLVLRDQIEALGESRDSFPESKLDELITLISREIADGKLKNHFEESMFQEISNFKQF
Ga0210378_100583473	3300021073	Groundwater Sediment	PLLLRDQIETLGASLDTLPEAKLDELVALISREISDGRLKNKFEESMFQEISNFKRF
Ga0212128_106845112	3300022563	Thermal Springs	VPLALLNRLATILTEVLGPMAPLVLRDQIEALDETQDRVPEAKLDELVALIGREISDANLRNKFEKSVLQEISNFKRL
Ga0207682_101806751	3300025893	Miscanthus Rhizosphere	NRLKIILTEVMGPMAPLVLRDQIEALGESAEAFPEAKLDELLTLVGREISDGKLKQKFEESMFQEISNFKRF
Ga0207644_116491652	3300025931	Switchgrass Rhizosphere	TDIIGPMAPFVLEDQIQSLNESSEGFPEAKLDELIGLVGREISDTNRRNKFEEQVFQEISNFKKF
Ga0207670_109422812	3300025936	Switchgrass Rhizosphere	VEAAAAAVKPVREVVSSALLNRLTIILTEVMGPMAPLVLRDQIDGLGESAETFPEAKLDELLTLIGREISDNKLKQKFEESMFQEISNFKRF
Ga0210116_10121061	3300025959	Natural And Restored Wetlands	EAVTAPVKPVGDRVPAALLDRLSTILTEVIGPMAPLVMRDQIEALGATSDSLPEAKLDELIGLIGKEISDTKQRNKLEESIYHEISNFKRF
Ga0210102_11013281	3300025971	Natural And Restored Wetlands	MAPLVMRDQIEALGATSDSLPEAKLDELIGLIGKEISDTKQRNKLEESIYHEISNFKRF
Ga0207668_105581141	3300025972	Switchgrass Rhizosphere	ILTEVIGPMAPLVLRDQIEALGESAEAFPEAKLDELLTLVGREISDGKLKQKFEESMFQEISNFKRF
Ga0207658_102051251	3300025986	Switchgrass Rhizosphere	KVVREVVSSALLNRLKIILTEVMGPMAPLVLRDQIEALGESAEAFPEAKLDELLTLVGREISDGKLKQKFEESMFQEISNFKRF
Ga0208420_10262512	3300026028	Natural And Restored Wetlands	EVIGPMAPLVLKDQIEALGESPDSMPESKLDELITMISREIGDGNLKSKFEQSMFQEISNFKRF
Ga0208422_10071803	3300026053	Natural And Restored Wetlands	GDRVPAALLDRLSTILTEVIGPMAPLVMRDQIEALGATSDSLPEAKLDELIGLIGKEISDTKQRNKLEESIYHEISNFKRF
Ga0256802_10576502	3300026492	Sediment	EAVAEPAKPVGDLVPAALLDRLSTILTEVIGPMAPLVMRDQIEALGASTDTLPEAKLDELIGLIGNEISDTKQRNKLEESIYQEISNFKRF
Ga0207980_10049562	3300026894	Soil	MAPLVLRDQIDNLGESQDNFPETKLDDLIGLISKEISDGKLRQKVEESMLQEISNFKKF
Ga0209967_10269641	3300027364	Arabidopsis Thaliana Rhizosphere	EVIGPMAPLVLRDQIEALGESPETLPEAKLDELITLIGREIGNGSLKNKFEQSMMQEISNFKRF
Ga0209984_10096612	3300027424	Arabidopsis Thaliana Rhizosphere	LLKRFTGILTEVIGPMAPLVLRDQIEALGESPETLPEAKLDELITLIGREIGNGSLKNKFEQSMLQEISNFKRF
Ga0209983_10171283	3300027665	Arabidopsis Thaliana Rhizosphere	KRFTGILTEVIGPMAPLVLRDQIEALGESPETLPEAKLDELITLIGREIGNGSLKNKFEQSMLQEISNFKRF
Ga0209726_101360123	3300027815	Groundwater	VEKPAGDLVPPALLERATAILTEVLGPMAPLVLRDQIKTLGESPASLPEAKLDDLIVLIGLEIGDDQLKKKFEQSMYQEIANFKRL
Ga0308185_10561481	3300031081	Soil	LLTRVATILTEVIGPMAPLLLRDQIEALGESPDNLPEAKLDELISLVGREISDGKLKSKFEESMFQEISNFKRF
(restricted) Ga0255311_11056662	3300031150	Sandy Soil	EIIGPMAPLVLRDQIESLGESPDSFPETKLDDLIALIGREVGDGKVKNKFEESMFQEISNFKRF
Ga0170819_114981982	3300031469	Forest Soil	VDLVPAALLSRVTSILTEVMGPMAPLVLRDQIEALGESPNSLPESKLDELIVLIGREITDSKIKNKFEESMFQEISNFKRF
Ga0310915_104000192	3300031573	Soil	PLVLRDQIEALGETAAAFPEAKLDELMTLIAREIPDSKLKQKFEESVFQEISNFKRF
Ga0307410_105838691	3300031852	Rhizosphere	LIEAVTETSKAVGELVPAPLLDRLSTILTEVIGPMAPLVMRDQIQTLAASTDSLPETKLDELISLIGKEISDTKQRNKFEESAYQEISIYKRF
Ga0310904_101043293	3300031854	Soil	VGELVPAPLLDRLSTILTEVIGPMAPLVMRDQIQTLGASTDSLPETKLDDLISLIGKEISDTKQRNKFEESAYQEISVYKRF
Ga0306925_122334791	3300031890	Soil	QSGLVEFVNPSSRPLGDVVPAPLFERLTSILTEVMGPMAPLVLRDQMDSLGESQENFPESKLDELIGLISREISDGKLRNKFEESMLQEISNFKKF
Ga0306926_101419073	3300031954	Soil	MAPLVLRDQIEALGETAAAFPEAKLDELMTLIAREIPDSKLKQKFEESVFQEISNFKRF
Ga0310902_111730761	3300032012	Soil	MGPMAPLVLRDQIEALGESPNSLPESKLDELIVLIGREISDSKIKNKFEESMFQEISNFKRF
Ga0310906_112149062	3300032013	Soil	PVAKPVADLVPPALLSRVTSILTEVMGPMAPLVLRDQIEALGESPNSLPESKLDELIVLIGREISDSKLKNKFEESMFQEISNFKRF
Ga0315912_112503862	3300032157	Soil	ALLDRLSATLTEVIGPMAPLVMRDQIEALGATSDRLPEAKLDELIGLIGKEISDIKQRNKFEESIYQEISNFKRF
Ga0307471_1000346354	3300032180	Hardwood Forest Soil	MAPLVLRDQIDSLGESQDNFPESKLDELIGLISKEISDGKLRNKFEESMLQEISNFKKF
Ga0335080_110208292	3300032828	Soil	DQIQTLGESQEAFPEAKLDELIGSLSREISDGKLRNKFEELVSQEISNFKKF
Ga0310811_102633011	3300033475	Soil	VSSALLNRLKIILTEVMGPMAPLVLRDQIEALGESAEAFPEAKLDELLTLVGREISDGKLKQKFEESMFQEISNFKRF
Ga0316600_112180601	3300033481	Soil	IGPMAPLVMRDQIEALGATSDSMPEAKLDELIGLIGKEISDTKQRNKFEDSIYQEISNFKRF
Ga0364927_0040039_833_1114	3300034148	Sediment	LVEIVNPSSRLAADLVPPALFDRLRSILTEVMGPMAPLVLRDQIDSLAESQDSFPESKLDELIGLISKEISDGKLRNKFEESMLQEISNFKKL
Ga0364929_0141064_595_774	3300034149	Sediment	MAPLVLRDQIESLGESADSLPESKLEELITLIGREISDGKLKSRFEESMVQEITNFKRF
Ga0314781_097452_381_560	3300034660	Soil	MAPLVMRDQIQTLGASTDSLPETKLDDLISLIGKEISDTKQRNKFEESAYQEISVYKRF
Ga0314795_117140_309_545	3300034670	Soil	VPAALLSRVTSILTEVMGPMAPLVLRDQIEALGESPNSLPDSKLDELIVLIGREISDSKLKNKFEESMFQEISNFKRF

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.54
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.54
Powered by PDBe Molstar

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters