Metagenome Family F053610

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F053610
Family Type	Metagenome
Number of Sequences	141
Average Sequence Length	64 residues
Representative Sequence	MTFEEWRKEAEQILMAWHYDDPACVDKDHWRQCFDRNYRPWEAARYAAELLRQRATAPVAKR
Number of Associated Samples	80
Number of Associated Scaffolds	141

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	55.07 %
% of genes near scaffold ends (potentially truncated)	40.43 %
% of genes from short scaffolds (< 2000 bps)	83.69 %
Associated GOLD sequencing projects	71
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.76

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (56.028 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (43.262 % of family members)
Environment Ontology (ENVO)	Unclassified (68.085 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (51.064 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 50.00% β-sheet: 0.00% Coil/Unstructured: 50.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.76
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.76
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
a.124.1.0: automated matches	d5fbfa_	5fbf	0.67572
c.47.1.10: Glutathione peroxidase-like	d2b7ka_	2b7k	0.67412
c.37.1.0: automated matches	d3taua_	3tau	0.66431
c.129.1.0: automated matches	d3bq9a2	3bq9	0.66337
c.1.4.0: automated matches	d3sr7a_	3sr7	0.6543

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 141 Family Scaffolds
PF00042	Globin	10.64
PF13439	Glyco_transf_4	5.67
PF09364	XFP_N	2.84
PF13380	CoA_binding_2	2.84
PF00582	Usp	2.13
PF01613	Flavin_Reduct	2.13
PF07690	MFS_1	2.13
PF13607	Succ_CoA_lig	1.42
PF03636	Glyco_hydro_65N	1.42
PF00239	Resolvase	1.42
PF00702	Hydrolase	0.71
PF03466	LysR_substrate	0.71
PF13442	Cytochrome_CBB3	0.71
PF09851	SHOCT	0.71
PF12840	HTH_20	0.71
PF00313	CSD	0.71
PF07731	Cu-oxidase_2	0.71
PF00589	Phage_integrase	0.71
PF00872	Transposase_mut	0.71
PF13701	DDE_Tnp_1_4	0.71
PF00118	Cpn60_TCP1	0.71
PF05598	DUF772	0.71
PF13561	adh_short_C2	0.71
PF00106	adh_short	0.71
PF13356	Arm-DNA-bind_3	0.71

COG ID	Name	Functional Category	% Frequency in 141 Family Scaffolds
COG1017	Hemoglobin-like flavoprotein	Energy production and conversion [C]	10.64
COG1853	FMN reductase RutF, DIM6/NTAB family	Energy production and conversion [C]	2.13
COG1554	Phosphatase/phosphodiesterase/kojibiose phosphorylase YcjT/PafA/Npp1, AlkP superfamily	Carbohydrate transport and metabolism [G]	1.42
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	1.42
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	1.42
COG0459	Chaperonin GroEL (HSP60 family)	Posttranslational modification, protein turnover, chaperones [O]	0.71
COG2132	Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and spore coat protein CotA)	Cell cycle control, cell division, chromosome partitioning [D]	0.71
COG3328	Transposase (or an inactivated derivative)	Mobilome: prophages, transposons [X]	0.71

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	56.03 %
Unclassified	root	N/A	43.97 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	56.03 %
Unclassified	root	N/A	43.97 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	56.03 %
Unclassified	root	N/A	43.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.97 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	42.55 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.97 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	36.88 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.71 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.97 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	7.09 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.71 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.97 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	6.38 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.71 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.97 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	5.67 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.71 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.97 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	2.13 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.71 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.97 %
Bradyrhizobium sp. 174	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 174	2.13 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.71 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.71 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005332\|Ga0066388_100585705	Not Available	1740	Open in IMG/M
3300005332\|Ga0066388_101186246	All Organisms → cellular organisms → Bacteria	1303	Open in IMG/M
3300005332\|Ga0066388_101489983	Not Available	1182	Open in IMG/M
3300005332\|Ga0066388_102099873	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1016	Open in IMG/M
3300005332\|Ga0066388_102184705	Not Available	998	Open in IMG/M
3300005332\|Ga0066388_102299067	All Organisms → cellular organisms → Bacteria	975	Open in IMG/M
3300005332\|Ga0066388_103369921	Not Available	816	Open in IMG/M
3300005332\|Ga0066388_107218838	Not Available	558	Open in IMG/M
3300005471\|Ga0070698_100148739	Not Available	2290	Open in IMG/M
3300005713\|Ga0066905_100100928	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1959	Open in IMG/M
3300005764\|Ga0066903_101166049	All Organisms → cellular organisms → Bacteria → Proteobacteria	1427	Open in IMG/M
3300005764\|Ga0066903_101296003	All Organisms → cellular organisms → Bacteria → Proteobacteria	1360	Open in IMG/M
3300005764\|Ga0066903_101652621	Not Available	1217	Open in IMG/M
3300005764\|Ga0066903_101968452	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 174	1121	Open in IMG/M
3300005764\|Ga0066903_102166066	Not Available	1071	Open in IMG/M
3300005764\|Ga0066903_103754472	Not Available	816	Open in IMG/M
3300005764\|Ga0066903_104009546	Not Available	789	Open in IMG/M
3300010043\|Ga0126380_10690672	Not Available	819	Open in IMG/M
3300010043\|Ga0126380_11887828	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	543	Open in IMG/M
3300010046\|Ga0126384_11990513	Not Available	555	Open in IMG/M
3300010048\|Ga0126373_11388483	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	768	Open in IMG/M
3300010048\|Ga0126373_12316875	Not Available	597	Open in IMG/M
3300010358\|Ga0126370_12427891	Not Available	521	Open in IMG/M
3300010361\|Ga0126378_13075706	Not Available	531	Open in IMG/M
3300010366\|Ga0126379_10323884	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 174	1559	Open in IMG/M
3300010366\|Ga0126379_13807028	Not Available	505	Open in IMG/M
3300010376\|Ga0126381_100303233	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2188	Open in IMG/M
3300010376\|Ga0126381_101557095	Not Available	955	Open in IMG/M
3300010376\|Ga0126381_102846370	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	690	Open in IMG/M
3300012198\|Ga0137364_10942800	All Organisms → cellular organisms → Bacteria	654	Open in IMG/M
3300012205\|Ga0137362_11628290	Not Available	532	Open in IMG/M
3300012582\|Ga0137358_10541622	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	783	Open in IMG/M
3300012971\|Ga0126369_10221746	All Organisms → cellular organisms → Bacteria	1840	Open in IMG/M
3300012971\|Ga0126369_10464768	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1317	Open in IMG/M
3300012971\|Ga0126369_11714805	Not Available	717	Open in IMG/M
3300016270\|Ga0182036_11638565	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	542	Open in IMG/M
3300016294\|Ga0182041_10181254	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1659	Open in IMG/M
3300016294\|Ga0182041_10392018	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1179	Open in IMG/M
3300016294\|Ga0182041_10610001	Not Available	959	Open in IMG/M
3300016294\|Ga0182041_12082401	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	529	Open in IMG/M
3300016294\|Ga0182041_12308573	Not Available	503	Open in IMG/M
3300016319\|Ga0182033_10561034	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	988	Open in IMG/M
3300016319\|Ga0182033_11148696	All Organisms → cellular organisms → Bacteria	695	Open in IMG/M
3300016341\|Ga0182035_10823793	Not Available	815	Open in IMG/M
3300016341\|Ga0182035_11105681	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	705	Open in IMG/M
3300016341\|Ga0182035_12090439	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	514	Open in IMG/M
3300016357\|Ga0182032_10590778	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	923	Open in IMG/M
3300016357\|Ga0182032_11629278	Not Available	562	Open in IMG/M
3300016371\|Ga0182034_10294475	Not Available	1298	Open in IMG/M
3300016387\|Ga0182040_10560913	All Organisms → cellular organisms → Bacteria	920	Open in IMG/M
3300016387\|Ga0182040_10787956	Not Available	782	Open in IMG/M
3300016387\|Ga0182040_11448910	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	582	Open in IMG/M
3300016404\|Ga0182037_10177520	All Organisms → cellular organisms → Bacteria	1632	Open in IMG/M
3300016404\|Ga0182037_10569323	Not Available	958	Open in IMG/M
3300016404\|Ga0182037_10787244	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 174	819	Open in IMG/M
3300016422\|Ga0182039_10645700	Not Available	929	Open in IMG/M
3300016422\|Ga0182039_11011102	All Organisms → cellular organisms → Bacteria	746	Open in IMG/M
3300016445\|Ga0182038_12087740	Not Available	514	Open in IMG/M
3300021439\|Ga0213879_10172704	Not Available	635	Open in IMG/M
3300021444\|Ga0213878_10112349	All Organisms → cellular organisms → Bacteria → Proteobacteria	1112	Open in IMG/M
3300021444\|Ga0213878_10463885	Not Available	555	Open in IMG/M
3300021560\|Ga0126371_10091875	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3004	Open in IMG/M
3300021560\|Ga0126371_10836809	Not Available	1066	Open in IMG/M
3300021560\|Ga0126371_12436758	Not Available	633	Open in IMG/M
3300027874\|Ga0209465_10336948	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	755	Open in IMG/M
3300031543\|Ga0318516_10000519	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	12374	Open in IMG/M
3300031543\|Ga0318516_10013929	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3958	Open in IMG/M
3300031543\|Ga0318516_10040307	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2507	Open in IMG/M
3300031543\|Ga0318516_10043797	All Organisms → cellular organisms → Bacteria	2415	Open in IMG/M
3300031543\|Ga0318516_10061580	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2065	Open in IMG/M
3300031545\|Ga0318541_10146112	Not Available	1295	Open in IMG/M
3300031546\|Ga0318538_10038388	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2284	Open in IMG/M
3300031561\|Ga0318528_10025530	Not Available	2866	Open in IMG/M
3300031561\|Ga0318528_10125955	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1356	Open in IMG/M
3300031573\|Ga0310915_10016050	All Organisms → cellular organisms → Bacteria	4465	Open in IMG/M
3300031573\|Ga0310915_10042503	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2899	Open in IMG/M
3300031573\|Ga0310915_10073518	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2257	Open in IMG/M
3300031573\|Ga0310915_10344939	Not Available	1055	Open in IMG/M
3300031679\|Ga0318561_10079821	Not Available	1692	Open in IMG/M
3300031679\|Ga0318561_10226662	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1016	Open in IMG/M
3300031680\|Ga0318574_10762040	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	567	Open in IMG/M
3300031680\|Ga0318574_10942151	Not Available	506	Open in IMG/M
3300031681\|Ga0318572_10010824	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4329	Open in IMG/M
3300031681\|Ga0318572_10800796	Not Available	560	Open in IMG/M
3300031682\|Ga0318560_10365363	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	780	Open in IMG/M
3300031723\|Ga0318493_10118952	Not Available	1342	Open in IMG/M
3300031724\|Ga0318500_10479090	Not Available	624	Open in IMG/M
3300031747\|Ga0318502_10625914	All Organisms → cellular organisms → Bacteria	649	Open in IMG/M
3300031751\|Ga0318494_10008659	All Organisms → cellular organisms → Bacteria → Proteobacteria	4723	Open in IMG/M
3300031764\|Ga0318535_10149732	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1039	Open in IMG/M
3300031769\|Ga0318526_10084165	All Organisms → cellular organisms → Bacteria → Proteobacteria	1256	Open in IMG/M
3300031770\|Ga0318521_10252439	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1029	Open in IMG/M
3300031779\|Ga0318566_10249525	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	880	Open in IMG/M
3300031782\|Ga0318552_10331420	Not Available	775	Open in IMG/M
3300031795\|Ga0318557_10089067	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1354	Open in IMG/M
3300031796\|Ga0318576_10396387	Not Available	652	Open in IMG/M
3300031799\|Ga0318565_10201566	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	968	Open in IMG/M
3300031833\|Ga0310917_10699485	Not Available	686	Open in IMG/M
3300031845\|Ga0318511_10006883	All Organisms → cellular organisms → Bacteria	3647	Open in IMG/M
3300031860\|Ga0318495_10255623	Not Available	783	Open in IMG/M
3300031879\|Ga0306919_10135614	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1779	Open in IMG/M
3300031890\|Ga0306925_11013788	Not Available	845	Open in IMG/M
3300031893\|Ga0318536_10006260	All Organisms → cellular organisms → Bacteria	4847	Open in IMG/M
3300031893\|Ga0318536_10095561	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1485	Open in IMG/M
3300031894\|Ga0318522_10213273	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	731	Open in IMG/M
3300031910\|Ga0306923_11035272	Not Available	889	Open in IMG/M
3300031912\|Ga0306921_10305960	All Organisms → cellular organisms → Bacteria	1860	Open in IMG/M
3300031941\|Ga0310912_10075200	All Organisms → cellular organisms → Bacteria → Proteobacteria	2441	Open in IMG/M
3300031941\|Ga0310912_10150218	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1757	Open in IMG/M
3300031941\|Ga0310912_11071784	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	616	Open in IMG/M
3300031942\|Ga0310916_11162772	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	639	Open in IMG/M
3300031945\|Ga0310913_10584421	Not Available	792	Open in IMG/M
3300031947\|Ga0310909_11159954	Not Available	626	Open in IMG/M
3300031947\|Ga0310909_11328277	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	577	Open in IMG/M
3300031954\|Ga0306926_10349436	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1828	Open in IMG/M
3300031954\|Ga0306926_10490667	All Organisms → cellular organisms → Bacteria	1510	Open in IMG/M
3300031954\|Ga0306926_11092924	Not Available	943	Open in IMG/M
3300032001\|Ga0306922_11366592	All Organisms → cellular organisms → Bacteria	713	Open in IMG/M
3300032035\|Ga0310911_10069472	Not Available	1878	Open in IMG/M
3300032035\|Ga0310911_10087540	All Organisms → cellular organisms → Bacteria	1690	Open in IMG/M
3300032035\|Ga0310911_10307192	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	913	Open in IMG/M
3300032041\|Ga0318549_10020746	Not Available	2483	Open in IMG/M
3300032052\|Ga0318506_10340231	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	665	Open in IMG/M
3300032059\|Ga0318533_10658645	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	768	Open in IMG/M
3300032060\|Ga0318505_10285797	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	778	Open in IMG/M
3300032060\|Ga0318505_10493888	Not Available	577	Open in IMG/M
3300032063\|Ga0318504_10064219	Not Available	1578	Open in IMG/M
3300032063\|Ga0318504_10614288	Not Available	522	Open in IMG/M
3300032066\|Ga0318514_10743559	Not Available	522	Open in IMG/M
3300032076\|Ga0306924_10839311	Not Available	1021	Open in IMG/M
3300032076\|Ga0306924_11518971	Not Available	709	Open in IMG/M
3300032091\|Ga0318577_10528667	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	562	Open in IMG/M
3300032180\|Ga0307471_100901955	All Organisms → cellular organisms → Bacteria → Proteobacteria	1051	Open in IMG/M
3300032261\|Ga0306920_102113285	Not Available	785	Open in IMG/M
3300033289\|Ga0310914_10354547	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1326	Open in IMG/M
3300033289\|Ga0310914_10794134	All Organisms → cellular organisms → Bacteria	845	Open in IMG/M
3300033290\|Ga0318519_10000574	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	10206	Open in IMG/M
3300033290\|Ga0318519_11046121	Not Available	508	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	85.82%
Loam	Environmental → Terrestrial → Soil → Loam	14.18%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	68.79%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	17.02%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	13.48%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.71%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	43.26%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	24.82%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	12.77%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	12.77%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.13%
Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil	2.13%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.71%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.71%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.71%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300021439	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R03	Environmental	Open in IMG/M
3300021444	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R02	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12627J18819_102380381	3300001867	Forest Soil	MGWHHDDPACVDKDHWRQCFDHNYRPWEAARYAAELLRQRATAPVAKR*
Ga0066388_1005857052	3300005332	Tropical Forest Soil	MTFEEWRKEAERMLMVSYHDDPACVDKDHWRECFDRNYRPWEAARYAAELLCLRATAPAAKG*
Ga0066388_1011862461	3300005332	Tropical Forest Soil	MRHELVDMRPEAAMTFERWRKEAKQMLIAWHNDDPACVDKDHWRQCFDHNYRPWEAARYAAEVLRQCATAPVAKR*
Ga0066388_1014899831	3300005332	Tropical Forest Soil	MTFEEWRKEAERMLMHSYHDDPACVDKDHWRECFDRNYRPWEAARYAAELLDLRATAPAARG*
Ga0066388_1016629333	3300005332	Tropical Forest Soil	TLMDSYHDDPACVDKDHWRKCFDRNYRPWEAARYAAELLELRATAPAVKG*
Ga0066388_1020998732	3300005332	Tropical Forest Soil	MTFERWRKEAKHRLIAWHNDDPACVDKDHWRQCFDRNYRPWEAARYAAELLRQRATAPVAKR*
Ga0066388_1021847052	3300005332	Tropical Forest Soil	MTFEQWRKEAEQMLIAWHDDDPVRVDKDHWRECFDRDYRPWEAARYADELLRLRATAPLRRAEH*
Ga0066388_1022990671	3300005332	Tropical Forest Soil	MTFQEWRKEGEQMLTAWHHDDPACVDNDHWRQCFERNYRPWEAARYAAELLCQRATAPVAKR*
Ga0066388_1033699212	3300005332	Tropical Forest Soil	MTFEEWRKEAEQMSMAWYYVDPASVDEDHWRQCFDCNYRPWEAARYTAELLHQRATAPVTKG*
Ga0066388_1072188382	3300005332	Tropical Forest Soil	MTFEEWRKEAEWMLMDSYHDDPACVDKDHWRKCFDSNYRPWEAARYAAELLELRGTAPAAKG*
Ga0070698_1001487392	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MTDQSLDGPRRRIRHEAAMTFEDWRKEAEQMLMGQHHDDPACVDKDHWRQCFDHNYRPWEAARYAAELLRQRATAPAAKR*
Ga0066905_1001009284	3300005713	Tropical Forest Soil	MTFEEWRKEAEQMLMAWYYDDPASMDKDHWRQCFDCNYRPWEAARYAAELLHRRATAPVAKG*
Ga0066903_1011660493	3300005764	Tropical Forest Soil	MTFEEWRKEAERMLMHSYHDDPACVDKEHWRECFDRNYRPWEAARYAAELRDLRATAPAAKG*
Ga0066903_1012960032	3300005764	Tropical Forest Soil	MTFEEWRKEAEQILMAWHYDDPACVNKDHWRRCFDRNYGPWEAARYAAELLRQRATAPVGKR*
Ga0066903_1016526211	3300005764	Tropical Forest Soil	LAVCEKEARRPVSHRPIHNPHEAAMTFEEWRKEAEQMLMAWHDDDPACVDKDHWRECFDRHYSPWEAARYAAELHELRATAPAAKD*
Ga0066903_1019684521	3300005764	Tropical Forest Soil	MTFEEWRKEAERMLMDSYHDDPACVDKEHWRECFDRNYRPWEAARYAAELHDRRATAHAVKG*
Ga0066903_1021660662	3300005764	Tropical Forest Soil	MTFEEWRKEAEQMLMAWHHDDPACVDKEHWRQCFARNYRPWEAARYAAELLRQHAIAKG*
Ga0066903_1037544722	3300005764	Tropical Forest Soil	MTFEEWRKEAERMLMDSYHDDPACVDKDHWRECFDRNYGPWEAARYAAELLDLRATTPAVKG*
Ga0066903_1040095461	3300005764	Tropical Forest Soil	MTFEEWRKEAERMLMDSYHDPACVDKDHWRECFDRNYRPWEAARYAAELHDLRATAPAVKG*
Ga0126380_106906721	3300010043	Tropical Forest Soil	MTFEEWRKEAKQILVGWHHDDPARVDKDHWRQCFDGNYRPWEAARYAAELLRQRATAPVAKR*
Ga0126380_118878282	3300010043	Tropical Forest Soil	MTFEEWRKEAEQMLMAWYYDDPASMDKDHWRQCFDCNYRPWEAARYTAELLHQRATAPV
Ga0126384_119905131	3300010046	Tropical Forest Soil	LATGLDRPTGYEAAMTFQEWRKEGEQMLMAWHHDDPACVDKDHWRQCFERNYRPWEAARYAAELLCQRATAPVAKR*
Ga0126373_113884831	3300010048	Tropical Forest Soil	MTFEEWRKEAEHMLMAWYYDDPASMDKDHWRQCFDCNYRPWEAARYTAELLHQRATAPVTKR*
Ga0126373_123168751	3300010048	Tropical Forest Soil	TFEEWRKEAEQMLMAWHDDDPACVDKDHWRECFDRHYSPWEAARYAAELHELRATAPAAKD*
Ga0126370_124278911	3300010358	Tropical Forest Soil	GAEQMFMAWYCDEPASFDKDHWRQFFDCNYRPWEAARYAAELLELRATAPAVKG*
Ga0126378_130757062	3300010361	Tropical Forest Soil	LVTGLDRPTGYEAAMTFQEWRKEGEQMLRTWHHDDPACVDNDHWRQCFERNYRPWEAARYAAELLCQRATAPVAKR*
Ga0126379_103238842	3300010366	Tropical Forest Soil	MTFEEWRKEAERMLMDSYHDDPACVDKDHWRECFDRNYRPWEAARYAAELLELRATAPAVKG*
Ga0126379_138070281	3300010366	Tropical Forest Soil	MTFEEWRKEAEQMLMAWHHDDPACVDKEHWRQCFDRNYRPWEAARYAAELLRQHATTPVAKG*
Ga0126381_1003032331	3300010376	Tropical Forest Soil	MTFEEWRKEAEQMLMAWHDDDPACVDKDHWRECFDRHYSPWEAARYAAELHELRATAPAAKD*
Ga0126381_1015570951	3300010376	Tropical Forest Soil	MTFEEWRKEAERMLMHSYHDDPACVDKDHWRECFDRNYRPWEAARYAAELLCLRATAPAAKG*
Ga0126381_1028463702	3300010376	Tropical Forest Soil	MTFEEWRKEAEQMLMAWYYDDPASMDKDHWRQCFDCNYRPWEAARYAAELLHRRVTAPVAKG*
Ga0137364_109428001	3300012198	Vadose Zone Soil	MTFEEWRKEAEQMLMAWHHDDPACVDKGHWRQCFERNYRPWEAARYAAELLCQRASASVARR*
Ga0137362_116282901	3300012205	Vadose Zone Soil	MTFEEWRKEAEQMLMAWHHDDPACVDKDHWRQCFERNYRPWEAARYAAELLCQRATAPVAKR*
Ga0137358_105416221	3300012582	Vadose Zone Soil	LATGLDRPTGYEAAMTFQEWRKEGEQMLTAWHHDDPACVDNDHWRQCFERNYRPWEAARYAAELLGQRANAPVAKR*
Ga0126369_102217463	3300012971	Tropical Forest Soil	MTFEEWRKEAERMLMVSYHDDPACVDKDHWRECFDRNYRPWEAARYAAELLDLRATAPAARG*
Ga0126369_104647681	3300012971	Tropical Forest Soil	AMTFEEWRKEAEQMLMAWYCDDPASVDKDHWRQCFDCNYRPWEAARYVAELLHQRAIAKG
Ga0126369_117148051	3300012971	Tropical Forest Soil	MTFEEWRKEAEQMLVAWHCDDPASVDEDHWRQCFDCNYRPWEAARYAAELLHRRATAPVAKR*
Ga0182036_116385651	3300016270	Soil	MTFEEWRKEAEQILMAWHYDDPACVDKDHWRQCFDRNYRPWEAARYAAELLRQRA
Ga0182041_101812541	3300016294	Soil	MTFEEWRKEAEQMLVAWHHDDPACVDKDHWRRCFDRNYRPWEAAHYAAELL
Ga0182041_103920182	3300016294	Soil	MTFEEWRKEAEQILMAWHYDDPACVNKDHWRQCFDRNYRPWEAARYTAELLRQRATAPVGKR
Ga0182041_106100012	3300016294	Soil	MRDEAAMTFEEWRKEAEQLLMAWHHDDPACVDKDHWRQCFDRNYRPWEAARYAAELLRQRATAPVAKR
Ga0182041_120824012	3300016294	Soil	MLRLAVCEKEARRPVSHWPIHNTHEAVMTFEEWRKEAEQMLMAWYCDDPASVDKDHWRQCFDSNYRPWEAARYTAELLHQRATAPVT
Ga0182041_123085732	3300016294	Soil	KEAEQILMAWHYDDPACVDKDHWRQCFDRNYRPWEAARYAAELLRQRATAPVAKR
Ga0182033_105610342	3300016319	Soil	MTFEEWRKEAEQILMAWHYDDPACVNKDHWRQCFDRNYRPWEAARYAAELLRQRATAPVAKR
Ga0182033_111486961	3300016319	Soil	EEWRKEAEQMLMAWYCDDPASVDKDHWRQCFDSNYRPWEAARYTAELLHQRATAPVTQG
Ga0182035_108237932	3300016341	Soil	MTFEEWRKEAEQMLMAWYYDDPASMDKDHWRQCFDCNYRPWEAARYAAELLCQRATAPVAKR
Ga0182035_111056813	3300016341	Soil	MTFEEWRKEAEQMLVAWYCDDPASVDKDHWRQCFDCNYRPWEAARYTAELLHQRA
Ga0182035_120904392	3300016341	Soil	MTFEEWRKEAEQMLMAWYCDDPASVDKDHWRQCFDCNYRPWEAARYTAELLHQRA
Ga0182032_105907781	3300016357	Soil	MTFEEWRKEAEQILMAWHYDDPACVNKDHWRQCFDGNYRPWEAARYAAELLRQRATAPAAKR
Ga0182032_116292781	3300016357	Soil	VSHRPIHNPHEAAMTFEEWRKEAEQTLMAWYCDDPASVDKDHWRQCFNCNYRPWEAARYTAELLHQRGTAPVTKG
Ga0182034_102944751	3300016371	Soil	QEAAMTFEEWRKEAERMLMHSYHDDPACVDKEHWRECFDRNYRPWEAARYAAELRDLRATAPAAKG
Ga0182040_105609131	3300016387	Soil	AEQMLMAWYYDDPASMDKDHWRQCFDCNYRPWEAARYAAELLHRRATAPVAKG
Ga0182040_107879561	3300016387	Soil	MTFEEWRKEAEQMLMAWYYDDPASVDEDHWRQCFDCNYRPWEAARYTAELLHQLATAPVK
Ga0182040_114489101	3300016387	Soil	MTFEEWRKEAEQILMAWHYDDPACVNKDHWRQCFDRNYRPWEAARYTAELLR
Ga0182037_101775201	3300016404	Soil	AMTFEEWRKEAEQILMAWHNDDPACVDKDHWRQCFDGNYRPWEAARYAAELLRQRATAPVGKR
Ga0182037_105693231	3300016404	Soil	GRDADIRHEAAMTFEEWRKEAEQILMAWHNDDPACVDKDHWRQCFDHNYRPWEAARYAAELLRQRATAPVAKR
Ga0182037_107872441	3300016404	Soil	DADIRQEAAMTFEEWRKEAERMLMHSYHDDPACVDKEHWRECFDRNYRPWEAARYAAELRDLRATAPAAKG
Ga0182039_106457001	3300016422	Soil	AMTFEEWRKEAEQILMAWHNDDPACVDKDHWRQCFDHNYRPWEAARYAAELLRQRATAPVAKR
Ga0182039_110111022	3300016422	Soil	LMAWYCDDPASVDKDHWRQCFDSNYRPWEAARYTAELLHQRATAPVTQG
Ga0182038_120877402	3300016445	Soil	TFEEWRKEAEQILMAWHYDDPACVDKDHWRQCFDRNYRPWEAARYAAELLRQRATAPVAK
Ga0213879_101727042	3300021439	Bulk Soil	MTFEEWRKEAERMLMDSYHDDPACVDKEHWRECFDRNYRPWEAARYAAELHDLRATAPAVKG
Ga0213878_101123492	3300021444	Bulk Soil	MTFEEWRKEAEWMLMDSYHDNPACVDKDHWRKCFDRNYRPWEAARYAAELLELRATAPAVKS
Ga0213878_104638852	3300021444	Bulk Soil	MTFEQWRKEAERMLMDWYDDDPGCVDKDHWRECFDRHYSPWEAARYAAELYELRATAPAAKG
Ga0126371_100918752	3300021560	Tropical Forest Soil	MTFEEWRKEAEQMLMAWHDDDPACVDKDHWRECFDRHYSPWEAARYAAELHELRATAPAAKD
Ga0126371_108368091	3300021560	Tropical Forest Soil	MTFEQWRKEAERMLMHSYHDDPACVDKEHWRECFDRNYRPWEAARYAAELRDLRATAPAAKG
Ga0126371_124367581	3300021560	Tropical Forest Soil	MTFEEWRKEAERMLLDSYHDNPACVEKDHWRKCFDRNYRPWEAARYAAELLELRAAAPAVKG
Ga0209465_103369481	3300027874	Tropical Forest Soil	MRKGSSATGVPPPIHNPHEAAMTFEEWRKEAEQMLMAWYCDDPASVDKDHWRQCFDCNYRPWEAARYVAELLHQRAIAKG
Ga0318516_1000051920	3300031543	Soil	MTFEEWRKEAEQILMPWHYEDPACVNKDHWRQCFDRNYRPWEAARYAAELLRQRATAPVAKR
Ga0318516_100139292	3300031543	Soil	MTFEEWRKEAEQILMAWHYDDPACVNKDHWRQCFDRNYRPWEAARYAAELLRQRATAPAAKR
Ga0318516_100403073	3300031543	Soil	MTFEEWRKEAEQILMAWHDDDPACVDKDHWRQCFDRNYRPWEAARYAAELLRQRATAPVAKR
Ga0318516_100437971	3300031543	Soil	MTGYRISTGRDADIRHEAAMTFEEWRKEAEQILMAWHNDDPACVDKDHWRQCFDHNYRPWEAARYAAELLRQRATAPVAKR
Ga0318516_100615802	3300031543	Soil	MTFEEWRKEAEQMLMAWHHDDPACVDKEHWRQCFDRNYRPWEAARYAAELLRQHATTPVAKG
Ga0318541_101461122	3300031545	Soil	RPIYNPHEAAMTFEEWRKEAEQMLVAWYCDDPASVDKDHWRQCFDCNYRPWEAARYAAELLHQRATAPVAKR
Ga0318538_100383882	3300031546	Soil	MTFEEWRKEAEQILMAWHNDDPACVDKDHWRQCFDHNYRPWEAARYAAELLRQRATAPVAKR
Ga0318528_100255301	3300031561	Soil	AAMTFEEWRKEAEQILMAWHYDDPACVNKDHWRQCFDRNYRPWEAARYAAELLRQRATAPAAKR
Ga0318528_101259552	3300031561	Soil	MTFEEWRKEAEQILMAWHYDDPACVDKDHWRQCFDRNYRPWEAARYAAELLRQRAT
Ga0310915_100160502	3300031573	Soil	MTFEEWRKEAERMLMHSYHDDPACVDKEHWRECFDRNYRPWEAARYAAELRDLRATAPAAKG
Ga0310915_100425032	3300031573	Soil	MTFEEWRKEAEQMLVAWYCDDPASVDKDHWRQCFDCNYRPWEAARYAAELLHQRATAPVAKR
Ga0310915_100735182	3300031573	Soil	MTFEEWRKEAEQMLMARYYDDPASVDEDHWRQCFDCNYRPWEAARYTAELLHQRATAPVTKG
Ga0310915_103449391	3300031573	Soil	MTFEEWRKEAQQMLMAWHHDDPACVDKDHWRQCFERNYSPWEAARYAAELLCQRATAPVANR
Ga0318561_100798211	3300031679	Soil	NRVSTGRELRHEAAMTFEEWRKEAEQILMAWHDDDPACVDKDHWRQCFDRNYRPWEAARYAAELLRQRATAPVAKR
Ga0318561_102266621	3300031679	Soil	MTFEEWRKEAEQILMAWHYDDPACVNKDHWRQCFDRNYRPWEAARYAAELLRQRATAP
Ga0318574_107620401	3300031680	Soil	MTFEEWRKEAEQILMAWHYDDPACVDKDHWRQCFDRNYRPWEAARYAAELL
Ga0318574_109421511	3300031680	Soil	MTFEEWRKEAEQMLVAWYYDDPASMDKDHWRQCFDCNYRPWEAARYAAELIHRRATAPVAKG
Ga0318572_100108245	3300031681	Soil	MTFEEWRKEAEQILMAWHNDDPACVDKDHWRQCFDGNYRPWEAARYAAELLRQRATAPVGKR
Ga0318572_108007961	3300031681	Soil	LSTMRHELVDMRPEAAMTFEEWRKEAEQMLMAWYYDDPASMDKDHWRQCFDCNYRPWEAARYAAELLCQRATAPVAKR
Ga0318560_103653631	3300031682	Soil	MLRLAVCEKEARRPVSHRPIYNPHEAAMTFEEWRKEAEQMLMARYYDDPASVDEDHWRQCFDCNYRPWEAARYTAELLHQRATAPVTKR
Ga0306917_112504722	3300031719	Soil	MTFEEWRKEAEQILMAWHYDDPACVDKDHWRQCFDRNYRPWEAARYAAEL
Ga0318493_101189521	3300031723	Soil	AMTFEEWRKEAEQILMAWHYDDPACVDKDHWRQCFDRNYRPWEAARYAAELLRQRATAPVAKR
Ga0318500_104790901	3300031724	Soil	EAVMTFEEWRKEAEQMLMAWYCDDPASVDKDHWRQCFDSNYRPWEAARYTAELLHQRATAPVTQG
Ga0318502_106259141	3300031747	Soil	HNLSTMRHELVDMRPEAAMTFEEWRKEAEQMLMAWYYDDPASMDKDHWRQCFDCNYRPWEAARYAAELLCQRATAPVAKR
Ga0318494_100086591	3300031751	Soil	MTFEEWRKEAEQILMAWHDDDPACVDKDHWRQCFDRNYRPWEAARYAAELLRQRATAPV
Ga0318535_101497323	3300031764	Soil	MTFEEWRKEAEQILMAWHYDDPACVDKDHWRQCFDRNYRPWEAARYAAELLRQRATAPVAKH
Ga0318526_100841651	3300031769	Soil	LRHEAAMTFEEWRKEAEQILMAWHDDDPACVDKDHWRQCFDRNYRPWEAARYAAELLRQRATAPVAKR
Ga0318521_102524391	3300031770	Soil	MTGYRISTGRDADIRHEAAMTFEEWRKEAEQILMAWHNDDPACVDKDHWRQCFDHNYRPWEAARYAAELLRQRDTAPVAKR
Ga0318566_102495252	3300031779	Soil	MTFEEWRKEAEQILMAWHYDDPACVNKDHWRQCFDRNYRQWEAARYAAELLRQRATAPAAKR
Ga0318552_103314203	3300031782	Soil	LVAMTFEEWRKEAQQMLMAWHHDDPACVDKDHWRQCFERNYSPWEAARYAAELLCQRATAPVANR
Ga0318557_100890672	3300031795	Soil	MTFEEWRKEAEQILMAWHYDDPACVNKDHWRQCFDRNYRPWEAARYAAELLR
Ga0318576_103963871	3300031796	Soil	ATGLPRPIYNPHEAAMTFEEWRKEAEQMLVAWYCDDPASVDKDHWRQCFDCNYRPWEAARYAAELLHQRATAPVAKR
Ga0318565_102015661	3300031799	Soil	MTFEEWRKEAEQILMAWHNDDPACVDKDHWRQCFDRNYRPWEAARYAAELLRQRAT
Ga0310917_106994851	3300031833	Soil	CEKEARRPVSHRPIYNPHEAAMTFEEWRKEAEQMLMARYYDDPASVDEDHWRQCFDCNYRPWEAARYTAELLHQRATAPVTKR
Ga0318511_100068831	3300031845	Soil	FEEWRKEAEQILMAWHNDDPACVDKDHWRQCFDHNYRPWEAARYAAELLRQRATAPVAKR
Ga0318495_102556231	3300031860	Soil	IRHEAAMTFEEWRKEAEQILMAWHNDDPACVDKDHWRQCFDRNYRPWEAARYAAELLRQRATAPVGKR
Ga0306919_101356142	3300031879	Soil	MTFEEWRKEAEQILMARHYDDPACVNKDHWRQCFDGNYRPWEAARYAAELLRQRATAPAAKR
Ga0306925_110137881	3300031890	Soil	TFEEWRKEAEQLLMAWHHDDPACVDKDHWRQCFDRNYRPWEAARYAAELLRQRATAPVAK
Ga0318536_100062601	3300031893	Soil	EEWRKEAEQILMAWNYDDPACVNKDHWRQCFDRNYRPWEAARYAAELLRQRATAPAAKR
Ga0318536_100955612	3300031893	Soil	MTGYRISTGRDADIRHEAAMTFEEWRKEAEQILMAWHNDDPACVDKDHWRQCFEHNYRPWEAARYAAELLRQRATAPVAKR
Ga0318522_102132731	3300031894	Soil	MLRLAVCEKEARRPVSHRPIYNPHEAAMTFEEWRKEAEQMLVAWYCDDPASVDKDHWRQCFDCNYRPWEAARYAAELLHQRATAPVAKR
Ga0306923_110352721	3300031910	Soil	SFSTMRHELVNMRPEAAMTFERWRKEAEQMLIAWHNDDPACVDKDHWRQCFDHNYRPWEAARYAAELLRQRATAPVAKR
Ga0306921_103059602	3300031912	Soil	MTFEEWRKEAEQILMAWHYDDPACVDKDHWRQCFDRNYRPWEAARYAAELLRQRATAPVAKR
Ga0310912_100752005	3300031941	Soil	MTFEEWRKEAEQMLMAWYYDDPASMDKDHWRQCFDCNYRPWEAARYAAELLHRRATAPVAKG
Ga0310912_101502182	3300031941	Soil	MTFEEWRKEAEQMLMARYYDDPASVDEDHWRQCFDCNYRPWEAARYTAELLHQRATAPVTKR
Ga0310912_110717841	3300031941	Soil	MTFEEWRKEAEQTLMAWYCDDPASVDKDHWRQCFNCNYRPWEAARYTAELLHQRGTAPVTKG
Ga0310916_111627722	3300031942	Soil	MTFEEWRKEAEQMLMAWYCDDPASVDKDHWRQCFDSNYRPWEAARYTAELLHQRATAPVTQG
Ga0310913_105844212	3300031945	Soil	LPYAKEKLRRPVSQRPIHDPHEAAMTFEEWRKEAEQMLMAWYYDDPASVDEDHWRQCFDCNYRPWEAARYTAELLHQRATAPVKR
Ga0310909_111599541	3300031947	Soil	EEWRKEAEQMLMAWYYDDPASVDEDHWRQCFDCNYRPWEAARYTAELLHQRATAPVKR
Ga0310909_113282771	3300031947	Soil	MTFEEWRKEAEQILMAWHYDDPACVDKDHWRQCFDRNYRPWEAARYAAELLRQ
Ga0306926_103494364	3300031954	Soil	MTFEEWRKEAEQLLMAWHHDDPACVDKDHWRQCFDRNYRPWEAARYAAELLRQRATAPVAKR
Ga0306926_104906671	3300031954	Soil	AMTFEEWRKEAEQMLMAWYYDDPASVDEDHWRQCFDCNYRPWEAARYTAELLHQRATAPVKR
Ga0306926_110929241	3300031954	Soil	MLRLAVCEKEARRPVSHRPIHNPHEAAMTFEEWRKEAEQMLMARYYDDPASVDEDHWRQCFDCNYRPWEAARYTAELLHQRATAPVTKR
Ga0306922_113665921	3300032001	Soil	EAEQMLMAWYYDDPASMDKDHWRQCFDCNYRPWEAARYAAELLHRRATAPVAKG
Ga0310911_100694721	3300032035	Soil	QMLVAWYCDDPASVDKDHWRQCFDCNYRPWEAARYAAELLHQRATAPVAKR
Ga0310911_100875404	3300032035	Soil	MIACPTTGQSLGGPRHRMRDEAAMTFEEWRKEAEQLLMAWHHDDPACVDKDHWRQCFDRNYRPWEAARYAAELLRQRATAPVAKR
Ga0310911_103071921	3300032035	Soil	MTFEEWRKEAEQMLVAWYCDDPASVDKDHWRQCFDCNYRPWEAARYTAELLHQRATAPVAKR
Ga0318549_100207467	3300032041	Soil	QILMAWHYDDPACVDKDHWRQCFDRNYRPWEAARYAAELLRQRATAPVAKR
Ga0318506_103402312	3300032052	Soil	MTFEEWRKEAEQILMAWHYDDPACVDKDHWRQCFDRNYRPWEAARYAAELLRQRATAPAAKR
Ga0318533_106586452	3300032059	Soil	MTFEEWRKEAEQILMAWHYDDPACVDKDHWRQCFDRNYRPWEAARYAAELLRQRATAPVA
Ga0318505_102857971	3300032060	Soil	MTFEEWRKEAEQMLVAWYCDDPASVDKDHWRQCFDCNYRPWEAARYTAELLHQRATAPV
Ga0318505_104938881	3300032060	Soil	EAEQMLMAWYYDDPASMDKDHWRQCFDCNYRPWEAARYAAELLHQRATAPVAKR
Ga0318504_100642192	3300032063	Soil	MTFEEWRKEAEQILMAWHYDDPACVNKDHWRQCFDRNYRPWEAARYAAELLRQRATAPVGKR
Ga0318504_106142882	3300032063	Soil	HRPIYNPHEAAMTFEEWRKEAEQMLMARYYDDPASVDEDHWRQCFDCNYRPWEAARYTAELLHQRATAPVTKR
Ga0318514_107435592	3300032066	Soil	QIFVAWHNDDPACVDKDHWRQCFDRNYRPWEAARYAAELLRQRATAPVGKR
Ga0306924_108393111	3300032076	Soil	MTFEKWRKEAEQMLMAWYCDDPASVDKDHWRQCFDCNYTPWEAARYTAELLHQRATAPVAKG
Ga0306924_115189711	3300032076	Soil	MTFEEWRKEAEQLLMAWHHDDPACVDKDHWRQCFDRNYRPWEAARYAAELL
Ga0318577_105286671	3300032091	Soil	MTFEEWRKEAEQMLMAWYYDDPASMDKDHWRQCFDCNYRPWEAARYAAELIHRRATAPVAKG
Ga0307471_1009019551	3300032180	Hardwood Forest Soil	MTFEEWRKEAKQILMASYDDDPAWVDKDHWRQCFDRNYRPWEAARYAAELLHQRATAPVAIPHRRLGM
Ga0306920_1021132851	3300032261	Soil	MTFEEWRKEAEQMLMAWYYDDPASVDEDHWRQCFDCNYRPWEAARYTAELLHQRATAPVK
Ga0310914_103545472	3300033289	Soil	MTFEEWRKEAEQILMAWHNDDPACVDKDHWRQCFDGNYRPWEEARYAAELLRQRATAPVGKR
Ga0310914_107941342	3300033289	Soil	MTFEEWRKEAEQMLVAWYYDDPASMDKDHWRQCFDCNYRPWEAARYAAELLCQRATAPVAKR
Ga0318519_100005741	3300033290	Soil	MTFEEWRKEAEQILMAWHNDYPACVDKDHWRQCFDHNYRPWEAARYAAELLRQRATAPVAKR
Ga0318519_110461211	3300033290	Soil	TCRLRLVAMTFEEWRKEAQQMLMAWHHDDPACVDKDHWRQCFERNYSPWEAARYAAELLCQRATAPVANR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F053610

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences