Metagenome / Metatranscriptome Family F053607

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F053607
Family Type	Metagenome / Metatranscriptome
Number of Sequences	141
Average Sequence Length	69 residues
Representative Sequence	MRRKTKIVLAITFMVAALVLAFSYIYISELLRQRVTTAHESAAQLTSNLAYLAANAAPDLSSTKVDT
Number of Associated Samples	129
Number of Associated Scaffolds	141

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	38.13 %
% of genes near scaffold ends (potentially truncated)	97.16 %
% of genes from short scaffolds (< 2000 bps)	90.07 %
Associated GOLD sequencing projects	118
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.43

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (98.582 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (15.603 % of family members)
Environment Ontology (ENVO)	Unclassified (36.170 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (41.844 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 56.84% β-sheet: 0.00% Coil/Unstructured: 43.16%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.43
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.43
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 141 Family Scaffolds
PF02954	HTH_8	95.74
PF00158	Sigma54_activat	1.42
PF02576	RimP_N	0.71
PF00691	OmpA	0.71
PF03061	4HBT	0.71
PF00311	PEPcase	0.71

COG ID	Name	Functional Category	% Frequency in 141 Family Scaffolds
COG0779	Ribosome maturation factor RimP	Translation, ribosomal structure and biogenesis [J]	0.71
COG2352	Phosphoenolpyruvate carboxylase	Energy production and conversion [C]	0.71

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.58 %
Unclassified	root	N/A	1.42 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.58 %
Unclassified	root	N/A	1.42 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.58 %
Unclassified	root	N/A	1.42 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	39.72 %
Unclassified	root	N/A	1.42 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.71 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	36.17 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	1.42 %
Unclassified	root	N/A	1.42 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.71 %

Name	Rank	Taxonomy	Distribution
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	36.17 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.42 %
Unclassified	root	N/A	1.42 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.71 %

Name	Rank	Taxonomy	Distribution
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	36.17 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.42 %
Unclassified	root	N/A	1.42 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.71 %

Name	Rank	Taxonomy	Distribution
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	25.53 %
Acidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	2.84 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.42 %
Unclassified	root	N/A	1.42 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	0.71 %
Cystobacterineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae	0.71 %

Name	Rank	Taxonomy	Distribution
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	12.77 %
Acidobacterium ailaaui	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → Acidobacterium ailaaui	2.84 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.42 %
Unclassified	root	N/A	1.42 %
Acidobacteriaceae bacterium KBS 83	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	0.71 %
Archangiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae	0.71 %

Name	Rank	Taxonomy	Distribution
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	12.77 %
Acidobacterium ailaaui	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → Acidobacterium ailaaui	2.84 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.42 %
Unclassified	root	N/A	1.42 %
Stigmatella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Stigmatella	0.71 %
Acidobacteriaceae bacterium KBS 83	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	0.71 %

Name	Rank	Taxonomy	Distribution
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	12.77 %
Acidobacterium ailaaui	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → Acidobacterium ailaaui	2.84 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.42 %
Unclassified	root	N/A	1.42 %
Stigmatella aurantiaca	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Stigmatella → Stigmatella aurantiaca	0.71 %
Acidobacteriaceae bacterium KBS 83	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	0.71 %

Name	Rank	Taxonomy	Distribution
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	12.77 %
Acidobacterium ailaaui	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → Acidobacterium ailaaui	2.84 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.42 %
Unclassified	root	N/A	1.42 %
Stigmatella aurantiaca DW4/3-1	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Stigmatella → Stigmatella aurantiaca → Stigmatella aurantiaca DW4/3-1	0.71 %
Acidobacteriaceae bacterium KBS 83	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	0.71 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_100383286	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	661	Open in IMG/M
3300001545\|JGI12630J15595_10015290	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1644	Open in IMG/M
3300002561\|JGI25384J37096_10228323	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	544	Open in IMG/M
3300002562\|JGI25382J37095_10048633	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1636	Open in IMG/M
3300004479\|Ga0062595_101542952	All Organisms → cellular organisms → Bacteria	615	Open in IMG/M
3300004479\|Ga0062595_102574441	All Organisms → cellular organisms → Bacteria	509	Open in IMG/M
3300005167\|Ga0066672_10438595	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	853	Open in IMG/M
3300005174\|Ga0066680_10023455	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	3406	Open in IMG/M
3300005177\|Ga0066690_10217159	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1276	Open in IMG/M
3300005331\|Ga0070670_101165463	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	704	Open in IMG/M
3300005336\|Ga0070680_100933489	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	749	Open in IMG/M
3300005338\|Ga0068868_101653567	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	602	Open in IMG/M
3300005354\|Ga0070675_100797423	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	863	Open in IMG/M
3300005364\|Ga0070673_101276533	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	689	Open in IMG/M
3300005365\|Ga0070688_101095343	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	636	Open in IMG/M
3300005445\|Ga0070708_100553538	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1085	Open in IMG/M
3300005468\|Ga0070707_101575428	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	624	Open in IMG/M
3300005529\|Ga0070741_10293025	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1530	Open in IMG/M
3300005538\|Ga0070731_10024597	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4126	Open in IMG/M
3300005540\|Ga0066697_10284320	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	975	Open in IMG/M
3300005547\|Ga0070693_101124736	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	600	Open in IMG/M
3300005554\|Ga0066661_10405043	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	835	Open in IMG/M
3300005563\|Ga0068855_101221493	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	781	Open in IMG/M
3300005586\|Ga0066691_10598843	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	655	Open in IMG/M
3300005764\|Ga0066903_103057992	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	906	Open in IMG/M
3300005841\|Ga0068863_102172663	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	565	Open in IMG/M
3300005983\|Ga0081540_1306232	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	546	Open in IMG/M
3300005993\|Ga0080027_10114030	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1020	Open in IMG/M
3300006052\|Ga0075029_101057883	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	562	Open in IMG/M
3300006059\|Ga0075017_100452559	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → Acidobacterium ailaaui	969	Open in IMG/M
3300006163\|Ga0070715_10048214	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → Acidobacterium ailaaui	1820	Open in IMG/M
3300006176\|Ga0070765_100033995	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → Acidobacterium ailaaui	4007	Open in IMG/M
3300006354\|Ga0075021_10414475	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	846	Open in IMG/M
3300006354\|Ga0075021_10740776	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	633	Open in IMG/M
3300006794\|Ga0066658_10720650	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	553	Open in IMG/M
3300006871\|Ga0075434_101641243	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → Acidobacterium ailaaui	651	Open in IMG/M
3300007788\|Ga0099795_10366850	All Organisms → cellular organisms → Bacteria	647	Open in IMG/M
3300009088\|Ga0099830_11488376	All Organisms → cellular organisms → Bacteria	564	Open in IMG/M
3300009545\|Ga0105237_10512470	All Organisms → cellular organisms → Bacteria	1206	Open in IMG/M
3300009700\|Ga0116217_10051049	All Organisms → cellular organisms → Bacteria → Acidobacteria	2997	Open in IMG/M
3300010326\|Ga0134065_10225628	All Organisms → cellular organisms → Bacteria	689	Open in IMG/M
3300010358\|Ga0126370_10681229	All Organisms → cellular organisms → Bacteria	900	Open in IMG/M
3300010360\|Ga0126372_10538395	All Organisms → cellular organisms → Bacteria	1106	Open in IMG/M
3300010366\|Ga0126379_13068915	All Organisms → cellular organisms → Bacteria	559	Open in IMG/M
3300010366\|Ga0126379_13169074	All Organisms → cellular organisms → Bacteria	551	Open in IMG/M
3300010371\|Ga0134125_13095626	All Organisms → cellular organisms → Bacteria	504	Open in IMG/M
3300010375\|Ga0105239_11019404	All Organisms → cellular organisms → Bacteria	952	Open in IMG/M
3300010375\|Ga0105239_12058325	All Organisms → cellular organisms → Bacteria	663	Open in IMG/M
3300010400\|Ga0134122_12880752	All Organisms → cellular organisms → Bacteria	535	Open in IMG/M
3300011270\|Ga0137391_10555370	All Organisms → cellular organisms → Bacteria	967	Open in IMG/M
3300011444\|Ga0137463_1030695	All Organisms → cellular organisms → Bacteria	1964	Open in IMG/M
3300011998\|Ga0120114_1094965	All Organisms → cellular organisms → Bacteria	574	Open in IMG/M
3300012096\|Ga0137389_10218468	All Organisms → cellular organisms → Bacteria	1593	Open in IMG/M
3300012189\|Ga0137388_10764036	All Organisms → cellular organisms → Bacteria	897	Open in IMG/M
3300012199\|Ga0137383_10932223	All Organisms → cellular organisms → Bacteria	634	Open in IMG/M
3300012199\|Ga0137383_11056505	All Organisms → cellular organisms → Bacteria	590	Open in IMG/M
3300012200\|Ga0137382_10533581	All Organisms → cellular organisms → Bacteria	835	Open in IMG/M
3300012201\|Ga0137365_11239296	All Organisms → cellular organisms → Bacteria	532	Open in IMG/M
3300012202\|Ga0137363_11253211	All Organisms → cellular organisms → Bacteria	629	Open in IMG/M
3300012207\|Ga0137381_10752826	All Organisms → cellular organisms → Bacteria	846	Open in IMG/M
3300012208\|Ga0137376_10685403	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	884	Open in IMG/M
3300012208\|Ga0137376_11633703	All Organisms → cellular organisms → Bacteria → Acidobacteria	535	Open in IMG/M
3300012349\|Ga0137387_11103540	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	565	Open in IMG/M
3300012350\|Ga0137372_10054024	All Organisms → cellular organisms → Bacteria	3533	Open in IMG/M
3300012357\|Ga0137384_11582544	All Organisms → cellular organisms → Bacteria	505	Open in IMG/M
3300012917\|Ga0137395_10808694	All Organisms → cellular organisms → Bacteria → Acidobacteria	679	Open in IMG/M
3300012929\|Ga0137404_10294948	All Organisms → cellular organisms → Bacteria	1405	Open in IMG/M
3300013100\|Ga0157373_10136642	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1724	Open in IMG/M
3300013770\|Ga0120123_1022957	All Organisms → cellular organisms → Bacteria	1266	Open in IMG/M
3300014167\|Ga0181528_10818417	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	524	Open in IMG/M
3300014969\|Ga0157376_10448989	All Organisms → cellular organisms → Bacteria	1257	Open in IMG/M
3300015241\|Ga0137418_10603773	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	860	Open in IMG/M
3300015245\|Ga0137409_10720109	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	833	Open in IMG/M
3300015262\|Ga0182007_10220956	All Organisms → cellular organisms → Bacteria	669	Open in IMG/M
3300015374\|Ga0132255_101409564	All Organisms → cellular organisms → Bacteria	1053	Open in IMG/M
3300016404\|Ga0182037_11933335	All Organisms → cellular organisms → Bacteria	529	Open in IMG/M
3300017930\|Ga0187825_10028111	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Stigmatella → Stigmatella aurantiaca → Stigmatella aurantiaca DW4/3-1	1892	Open in IMG/M
3300017933\|Ga0187801_10410303	All Organisms → cellular organisms → Bacteria	564	Open in IMG/M
3300017955\|Ga0187817_10341415	All Organisms → cellular organisms → Bacteria	955	Open in IMG/M
3300017961\|Ga0187778_10565187	All Organisms → cellular organisms → Bacteria	760	Open in IMG/M
3300017970\|Ga0187783_11267539	All Organisms → cellular organisms → Bacteria	531	Open in IMG/M
3300017973\|Ga0187780_11009589	All Organisms → cellular organisms → Bacteria	606	Open in IMG/M
3300017975\|Ga0187782_11583681	All Organisms → cellular organisms → Bacteria	517	Open in IMG/M
3300018007\|Ga0187805_10082209	All Organisms → cellular organisms → Bacteria	1451	Open in IMG/M
3300018032\|Ga0187788_10165841	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	839	Open in IMG/M
3300018062\|Ga0187784_10803328	All Organisms → cellular organisms → Bacteria	751	Open in IMG/M
3300018433\|Ga0066667_12317986	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	503	Open in IMG/M
3300018482\|Ga0066669_11142259	All Organisms → cellular organisms → Bacteria	703	Open in IMG/M
3300019211\|Ga0187799_1074992	All Organisms → cellular organisms → Bacteria	513	Open in IMG/M
3300019882\|Ga0193713_1106257	All Organisms → cellular organisms → Bacteria	780	Open in IMG/M
3300020580\|Ga0210403_11378053	All Organisms → cellular organisms → Bacteria	535	Open in IMG/M
3300021433\|Ga0210391_10208510	All Organisms → cellular organisms → Bacteria	1536	Open in IMG/M
3300021560\|Ga0126371_13733180	All Organisms → cellular organisms → Bacteria	513	Open in IMG/M
3300022557\|Ga0212123_10656211	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	653	Open in IMG/M
3300024330\|Ga0137417_1162027	All Organisms → cellular organisms → Bacteria	923	Open in IMG/M
3300025320\|Ga0209171_10476256	All Organisms → cellular organisms → Bacteria	623	Open in IMG/M
3300025509\|Ga0208848_1113810	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	537	Open in IMG/M
3300025899\|Ga0207642_10023680	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	2457	Open in IMG/M
3300025899\|Ga0207642_10097943	All Organisms → cellular organisms → Bacteria	1465	Open in IMG/M
3300025906\|Ga0207699_10507249	All Organisms → cellular organisms → Bacteria	871	Open in IMG/M
3300025911\|Ga0207654_11324658	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	525	Open in IMG/M
3300025913\|Ga0207695_11119738	All Organisms → cellular organisms → Bacteria	667	Open in IMG/M
3300025914\|Ga0207671_10188056	All Organisms → cellular organisms → Bacteria	1609	Open in IMG/M
3300025914\|Ga0207671_10205704	All Organisms → cellular organisms → Bacteria	1538	Open in IMG/M
3300025916\|Ga0207663_11337672	All Organisms → cellular organisms → Bacteria	577	Open in IMG/M
3300025918\|Ga0207662_10613576	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	758	Open in IMG/M
3300025935\|Ga0207709_10801511	All Organisms → cellular organisms → Bacteria	760	Open in IMG/M
3300025941\|Ga0207711_11798485	All Organisms → cellular organisms → Bacteria	556	Open in IMG/M
3300025945\|Ga0207679_11213212	All Organisms → cellular organisms → Bacteria	692	Open in IMG/M
3300026078\|Ga0207702_11676570	All Organisms → cellular organisms → Bacteria	629	Open in IMG/M
3300026088\|Ga0207641_10648369	All Organisms → cellular organisms → Bacteria	1037	Open in IMG/M
3300026313\|Ga0209761_1047508	All Organisms → cellular organisms → Bacteria	2428	Open in IMG/M
3300026328\|Ga0209802_1048973	All Organisms → cellular organisms → Bacteria	2102	Open in IMG/M
3300026333\|Ga0209158_1004183	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	8175	Open in IMG/M
3300026335\|Ga0209804_1015751	All Organisms → cellular organisms → Bacteria	3998	Open in IMG/M
3300026358\|Ga0257166_1038076	All Organisms → cellular organisms → Bacteria	670	Open in IMG/M
3300026523\|Ga0209808_1054709	All Organisms → cellular organisms → Bacteria	1805	Open in IMG/M
3300027497\|Ga0208199_1098309	All Organisms → cellular organisms → Bacteria	606	Open in IMG/M
3300027662\|Ga0208565_1074993	All Organisms → cellular organisms → Bacteria	1044	Open in IMG/M
3300027862\|Ga0209701_10011683	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	5744	Open in IMG/M
3300027869\|Ga0209579_10377004	All Organisms → cellular organisms → Bacteria	768	Open in IMG/M
3300028379\|Ga0268266_10800852	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	910	Open in IMG/M
3300028906\|Ga0308309_10162983	All Organisms → cellular organisms → Bacteria	1805	Open in IMG/M
3300028906\|Ga0308309_10479905	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1073	Open in IMG/M
3300030114\|Ga0311333_10992177	All Organisms → cellular organisms → Bacteria	711	Open in IMG/M
3300030838\|Ga0311335_11270530	All Organisms → cellular organisms → Bacteria	529	Open in IMG/M
3300031057\|Ga0170834_105078570	All Organisms → cellular organisms → Bacteria	987	Open in IMG/M
3300031057\|Ga0170834_113309026	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	725	Open in IMG/M
3300031128\|Ga0170823_16665631	All Organisms → cellular organisms → Bacteria	511	Open in IMG/M
3300031720\|Ga0307469_10225790	All Organisms → cellular organisms → Bacteria	1485	Open in IMG/M
3300031720\|Ga0307469_12504852	All Organisms → cellular organisms → Bacteria	504	Open in IMG/M
3300031754\|Ga0307475_10940613	All Organisms → cellular organisms → Bacteria	681	Open in IMG/M
3300031910\|Ga0306923_12231929	All Organisms → cellular organisms → Bacteria	548	Open in IMG/M
3300032001\|Ga0306922_11931856	All Organisms → cellular organisms → Bacteria	577	Open in IMG/M
3300032783\|Ga0335079_10263524	All Organisms → cellular organisms → Bacteria	1891	Open in IMG/M
3300032783\|Ga0335079_10809447	All Organisms → cellular organisms → Bacteria	970	Open in IMG/M
3300032892\|Ga0335081_10119831	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3850	Open in IMG/M
3300033158\|Ga0335077_10368049	All Organisms → cellular organisms → Bacteria	1553	Open in IMG/M
3300033433\|Ga0326726_10723116	All Organisms → cellular organisms → Bacteria	961	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	80.85%
Host-Associated	Host-Associated	19.15%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	72.34%
Plants	Host-Associated → Plants	19.15%
Aquatic	Environmental → Aquatic	8.51%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	70.21%
Rhizosphere	Host-Associated → Plants → Rhizosphere	12.77%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.38%
Freshwater	Environmental → Aquatic → Freshwater	3.55%
Sediment	Environmental → Aquatic → Sediment	3.55%
Peat	Environmental → Terrestrial → Peat	2.13%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.42%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	51.77%
Loam	Environmental → Terrestrial → Soil → Loam	9.93%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	9.22%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	8.51%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.67%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.55%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.55%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.55%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.13%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.42%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.71%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	26.24%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	12.77%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	9.22%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	9.22%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	7.80%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.38%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.67%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.55%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.55%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.55%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.84%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	2.13%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.13%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	1.42%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.42%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.71%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.71%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.71%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	15.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	9.22%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	4.96%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	4.26%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.26%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.55%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.55%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.84%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.84%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.84%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.13%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	2.13%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.13%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.13%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.13%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.13%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.13%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.13%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	1.42%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.42%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	1.42%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.42%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	1.42%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.42%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.42%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.71%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.71%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.71%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.71%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.71%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.71%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.71%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.71%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.71%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.71%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.71%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.71%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.71%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.71%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.71%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.71%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.71%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.71%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.71%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.71%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001545	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1	Environmental	Open in IMG/M
3300002561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm	Environmental	Open in IMG/M
3300002562	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005983	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300005993	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300010326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011444	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT800_2	Environmental	Open in IMG/M
3300011998	Permafrost microbial communities from Nunavut, Canada - A30_35cm_6M	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300013770	Permafrost microbial communities from Nunavut, Canada - A15_5cm_18M	Environmental	Open in IMG/M
3300014167	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_10_metaG	Environmental	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015262	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300017930	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_5	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300018032	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP10_20_MG	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019211	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_10_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019882	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3a2	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025320	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG (SPAdes)	Environmental	Open in IMG/M
3300025509	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026313	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026328	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)	Environmental	Open in IMG/M
3300026333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)	Environmental	Open in IMG/M
3300026335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139 (SPAdes)	Environmental	Open in IMG/M
3300026358	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-14-B	Environmental	Open in IMG/M
3300026523	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 (SPAdes)	Environmental	Open in IMG/M
3300027497	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG (SPAdes)	Environmental	Open in IMG/M
3300027662	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300030114	I_Fen_E2 coassembly	Environmental	Open in IMG/M
3300030838	I_Fen_N1 coassembly	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1003832861	3300000364	Soil	MRRKTKIVLAITFMVAVLVLGFSYIYISELLRQRVTTAHESAAQLTSNLAYLAANA
JGI12630J15595_100152901	3300001545	Forest Soil	MRLKTKIVLAITFMVAALVLTFSYIYISELLRQRVTTAAESANQLTSNLAYLAANAAPDLTS
JGI25384J37096_102283231	3300002561	Grasslands Soil	MRRRTKIVLAITFMVAVLVSAFSYIYISQLLRQQVTTADATASNLTSNLAFLATKAAPDLSSTRVDTSNPQAVRRAI
JGI25382J37095_100486332	3300002562	Grasslands Soil	VLAITFMVTALVSAFSYIYISQLLRQRVMTAYDSSSQLTSNLSYLAANAVPDL
Ga0062595_1015429522	3300004479	Soil	MRRKTKIVLAITFMVAVLVLGFSYIYISELLRQRITTAHESAGQLTSNLAYLAAN
Ga0062595_1025744412	3300004479	Soil	MFMRRKTKIVLAITFMVAVLVLGFSYIYISELLRQRVTTAHESAAQLTSNLAYLAANAIPDLSSTKVDTTN
Ga0066672_104385952	3300005167	Soil	MRRRTTIVLAITFMVATLVCAFSYIYISQLLRQRVVTAHETAAYLDTQLAYLASNAAPDLTSTRVDTND
Ga0066680_100234551	3300005174	Soil	MRRRTKIVLAITFMVAVLVSAFSYIYISQLLRQQVTTADATASNLTSNLAFLATKAAPDLSSTR
Ga0066690_102171592	3300005177	Soil	VLAITFMVATLVCAFSYIYISQLLRQRVVTAHETAAYLDTQLAYLASNAAPDLTSTRVDTND
Ga0066684_107290821	3300005179	Soil	MRRKTKIVLGITMMVFLLVVAFSYIYISELLRQRITSAYEGAALLSEQLAYATYNAQPDLSSTR
Ga0070670_1011654632	3300005331	Switchgrass Rhizosphere	MRRKTKIVLGVTVMATALEAVFSYIYISQLLRQRITTAHETAARLTSQLAYLATNAAPDLSSTKVDTSNPVAV
Ga0070680_1009334891	3300005336	Corn Rhizosphere	MRRRTQIVLAITFMVAALVSGASYIYISQILHQRISTAHDTAMYLTSQLAYLATNAAPDLSSTRVDTS
Ga0068868_1016535671	3300005338	Miscanthus Rhizosphere	MRRKTKLVLAITFMVAVLVTAFSYVYISELLRQRVTTARESAAQLTSNLAYLAANAAP
Ga0070675_1007974232	3300005354	Miscanthus Rhizosphere	MRRKTQIVLAITLMVFVLVATFSYIYISELLRQRITSAYETAALLSQQLAY
Ga0070673_1012765332	3300005364	Switchgrass Rhizosphere	MRRRTKLVLAITFMVAALVTGASYVYISQMLRQRVATAHDTAMYLTSQLAYLSSNAAPDLTSTRVDTNNP
Ga0070688_1010953432	3300005365	Switchgrass Rhizosphere	MRRKTKIVLGVTVMATALVAVFSYIYISQLLRQRITTAHETAARLTSQLAYLATNAAPDLSSTKVDTSNPVAVRKSLSYYLSTDR
Ga0070708_1005535382	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MRRRTKIVLAITFMVAVLVSAFSYIYISQLLRQQVTTADATASNLTSNLAFLATKAAPDLSSTRVDTSKPQAVRRAISYYLGT
Ga0070707_1015754281	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MRRKTKIVLAITFMVAVLVLAFSYIYISELLRQRVTTARESAAQLTSNLAYLAANAAPDLSSTKVD
Ga0070741_102930251	3300005529	Surface Soil	MRRRTQIVLAITFMVAVLVCAASYLYISALLRQSVTAANQTAANLVSNLAFLATNEA
Ga0070731_100245971	3300005538	Surface Soil	MLRRTKIVLAITVMVTVLAAAFSYLYIFQILNQQVTTAHDTAAYLTTQLAYLAADAAPDLTSTRTNTSKPESVRRAT
Ga0066697_102843201	3300005540	Soil	VLAITFMVAALVCAFSYIYISQLLRQRVATAHENAAYLDTQLAYLATNAAPDLTSTRVDTND
Ga0070693_1011247361	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	MRRKTKIVLAITFMVAVLVLGFSYIYISELLRQRITTAHESAGQLTSNLAYLAANAIPDLGSTKVDTTNPQAMRRAVGYYLGTDR
Ga0066661_104050431	3300005554	Soil	VLAITFMVATLVCAFSYIYISQLLRQRVVTAHETAAYLDTQLAYLASNAAPDLTST
Ga0068855_1012214932	3300005563	Corn Rhizosphere	MRRRTQIVLAITFMVAALVTGASYLYISQILRQGINTAHETASYLTSQLAFLASNAAPDLSSTRIDTNNP
Ga0066691_105988431	3300005586	Soil	VLAITFMVAALVCAFSYIYISQLLRQRVVTAHETAAYLDTQLAYLASNAAPDLTSTRVDTNDPEAVRRAV
Ga0066903_1030579921	3300005764	Tropical Forest Soil	MRRKTQIVLTITFMVTALVCSFSYIYISEILHQQVATAHETAAYLASQVAYLADNAAPDLTS
Ga0068863_1021726632	3300005841	Switchgrass Rhizosphere	MRRKTKIVLGVTVMATALVAVFSYIYISQLLRQRITTAHETAARLTSQLAYLATNAAPDLSSTKVDTSNPVA
Ga0081540_13062321	3300005983	Tabebuia Heterophylla Rhizosphere	MRRKTQIVLAITLMTAALVTIFSYVYISELLRQRVTTARESAAQISSNLAYLAATAAPDLSSTRVDTRDPQAMHR
Ga0080027_101140301	3300005993	Prmafrost Soil	MRRRTQIVLAVTFMAVALVSGASYIYVSQILRQGITTTHDTATHLTSQLAYLAINAAPDLSSTRVDT
Ga0075029_1010578831	3300006052	Watersheds	MRRKTKIVLAITFMVAALVLAFSYIYISELLRQRVTTAHESAAQLTSNLAYLAANAAPDLSSTKVDT
Ga0075017_1004525592	3300006059	Watersheds	MRRKTKIVLAITFMVAALVLAFSYIYISELLRQRVTTAHESAAQLTSNLAYLAANAAPDLSSTK
Ga0070715_100482142	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MRRKTKIVLAITFMVAVLVLAFSYIYISELLRQRVTTARESAAQLTSNLAYLAANA
Ga0070765_1000339954	3300006176	Soil	MRRRTQIVLTVTLMVALLVTAFSYIYISQLLRQRINTARDTADNLTSQLAYVATNAVPDLTSTKVDTSKPEAVRKGIE
Ga0075021_104144751	3300006354	Watersheds	MRRKTKIVLAITFMVAVLVLGFSYIYISELLRQRVTTAHESAGQLTSNLAYLAANAIPDLGSTKVDTTNPQAMRR
Ga0075021_107407762	3300006354	Watersheds	MRRKTKIVLGITLMVFVLVTAFSYIYISELLRQRIASAYEAAALLSEQLAYA
Ga0066658_107206501	3300006794	Soil	MRRRTQIVLAITLMVAAVVSGASYIYIAQILRQGINTTHDNAAFVAAQIAYLATNAAPDLSSTRVDTTNP
Ga0075434_1016412432	3300006871	Populus Rhizosphere	MRRKTQIVLAITLMTAALVTAFSYLYISELLRQRVTTARESAAQISSNLAYLAATAAPDLGSTRVDTRDPQATHRALAYY
Ga0099795_103668502	3300007788	Vadose Zone Soil	MRRKTKIVLAITFMVAVLVLAFSYIYISELLRQRVTTARESAAQLTSNLAYLAANAAPDL
Ga0099830_114883762	3300009088	Vadose Zone Soil	MRRRTQLVLAITFMVTVLVSTFSYIYISQLLRQRVTTVHESASQLTSNLADLAANAAPDLSSTRVDTSSPEAIRRA
Ga0105237_105124702	3300009545	Corn Rhizosphere	MRRKTKIVLAITFMVAVLVLAFSYIYISELLRQRVTTARESAAQLTSNLAYLAANAAPDLSSTKVDTTNPQATRRAVAYYL
Ga0116217_100510493	3300009700	Peatlands Soil	MRRKTQIVLAITFMVAVLVSSFSYIYISYVLRQQIRAAHDNAANLTSQLAYLADNAAPDLSSTRVNMNDPEAVRRAIAYY
Ga0134065_102256282	3300010326	Grasslands Soil	MRRKTTIVLAITFMVAALVSAFSYLYVSELLRQQVTTAHESASQLASNLAYLAANAAPDLSSTRVN
Ga0126370_106812292	3300010358	Tropical Forest Soil	MRRRTQIVLAITFMVAALVTGASYIYIAQILRQGINTTHDNAAFVAAQIAYLATNAAPDLSSTRVD
Ga0126372_105383951	3300010360	Tropical Forest Soil	MRRKTQIVLAITLMTAALVTAFSYLYISELLRQRVTTARESAAQISSNLAYLAATATP
Ga0126379_130689151	3300010366	Tropical Forest Soil	MRRKTQIVLAITLMTAALVTAFSYLYISELLRQRVTTARESAAQISSNLAYLAATAAPDLSSTRVDTRDP
Ga0126379_131690741	3300010366	Tropical Forest Soil	MRRRTKIVFAITFMVAVLVTSFSYIYISELLRQRVLTAQDTAHYVAQQLSYQAINAVPDLTS
Ga0134125_130956262	3300010371	Terrestrial Soil	MRRRTQIVLAITFMVAVLVCGASYIYISQILRYRINSAHDTAVYLTSQLAYLASNAAPDLSSTR
Ga0105239_110194041	3300010375	Corn Rhizosphere	MRRKTKIVLAITFMVAVLVLAFSYIYISELLRQRVTTARESAAQLTSNLAYLAANAAPDLSSTKVDTTNPQATRRAVAYY
Ga0105239_120583252	3300010375	Corn Rhizosphere	MRRRTKIVLLITFMVAVLVTGASYVFISQMLRQRIATAHDTAMYLASQLAYLASNAAPDLTSTRVDTNN
Ga0134122_128807521	3300010400	Terrestrial Soil	MRRRTKIVLAITFMVAALVTSTSYIFISQMLRQRVATAHDTAMYLTSQLAYLSSNAAPDLTSTRVDTNNPEAV
Ga0137391_105553701	3300011270	Vadose Zone Soil	MRRKTKIVLAITFMVAVLVLGFSYIYISELLRQRVVTAHESAGQLTSNLAYLAANAIPDLSSTKVDTTNPQATRRAV
Ga0137463_10306951	3300011444	Soil	MRRKTKIVLAITFMVAVLVLAFSYIYISELLRQRVTTARESAAQLTSNLAYLAANAAPDLGSTKV
Ga0120114_10949652	3300011998	Permafrost	MVAVLVSAFSYVYISQLLRQQVSTADTTASNLTSNLAFLATKAAPDLSSTRVDTSNPQAVRR
Ga0137389_102184681	3300012096	Vadose Zone Soil	MRRRTQIVLAVTFMVAALVSGASYIYISQILRQGITTTHDNATYLTSQLAYLAANAAPDLSSARVDTSNPEAVRR
Ga0137388_107640361	3300012189	Vadose Zone Soil	MRRKTKIVLAITFMVAVLVLAFSYIYISELLRQRVTTARESAAQLISNLAYLAANAAPDLSSTKVD
Ga0137383_109322232	3300012199	Vadose Zone Soil	MRRRTQIVLAITFMVAALVSGASYIYISQILRQGITTTHDDATYLTSQLAYLAANAAPDLSSTRVDTSNPEAV
Ga0137383_110565052	3300012199	Vadose Zone Soil	MRRRTTIVLAITFMVATLVCAFSYIYISQLLRQRVVTAHETAAYLDTQLAYLASNAAPDLTSTRVDTNDP
Ga0137382_105335812	3300012200	Vadose Zone Soil	MRRRTQIVLAITFMVAALVSGASYIYITQILRQGINTTHDDAAFAAAQIAYLATNAAPDLSSTRVDTTNPEA
Ga0137365_112392961	3300012201	Vadose Zone Soil	MRRRTKIVLAITFMVAVLVSAFSYIYISQLLRQQVTTADATASNLTSNLAFLATKAAPDLSSTRVDTSN
Ga0137363_112532112	3300012202	Vadose Zone Soil	MRRKTKIVLAITFMVAVLVLGFSYIYISELLRQRVTTARESAGQLTSNLAYLAANAIPDLSSTKVDT
Ga0137381_107528261	3300012207	Vadose Zone Soil	MVAVLVSAFSYIYISQLLRQQVTTADATAANLTSNLAFLATKAAPDLSSTRVDTNNPQAVRRAIAYYL
Ga0137376_106854031	3300012208	Vadose Zone Soil	MRRRTTIVLAITFMVATLVCAFSYIYISQLLRQRVVTAHETAAYLDTQLAYLASNAAPDLTSTRVDTNDPEAVRRAVIYY
Ga0137376_116337031	3300012208	Vadose Zone Soil	MVAVLVSAFSYIYISQLLRQQVTTADATAANLTSNLAFLATKAAPDLSSTRVDTSNPQAVRRAIAYYLG
Ga0137387_111035401	3300012349	Vadose Zone Soil	MRRRTQLVLAITFMVTALVSTFSYIYISQLLRQRVTTAHESASQLTSNLADLAANAAPDLSSTRVDTSSPEAIR
Ga0137372_100540243	3300012350	Vadose Zone Soil	LLIFMRRRTQIVLAITFMVAAVVSGGSYIYIAQILRQGINTTHDDAAFAAAQIAYLATNAAPDLSSTRVDTTNP
Ga0137384_115825442	3300012357	Vadose Zone Soil	MRRRTQIVLAITFMVAALVSGASYIYISQILRQGITTTHDDATYLTSQLAYLAANAAPDLSSTRVD
Ga0137395_108086942	3300012917	Vadose Zone Soil	MVAVLVSAFSYIYISQLLRQQVTTADATAANLTSNLAFLATKAAPDLSSTRVDTSNP*
Ga0137404_102949481	3300012929	Vadose Zone Soil	MRRRTKIVLAITFMVAVLVYAFSYIYISQLLRQQVTTADATASNLTSNLAFLATKAAPDLSSTRGDTSNPQAVR
Ga0157373_101366422	3300013100	Corn Rhizosphere	MRRKTQIVLAITLMVFVLVATFSYIYISELLRQRITSAYETAALLSQQLAYATYNAQ
Ga0120123_10229571	3300013770	Permafrost	MRRRTQIVLAITFMVAALVSGASYIYISQILRQGITTTHDTATYLTSQLAFLATNAAPDLSSTRVDTSNPE
Ga0181528_108184171	3300014167	Bog	MRLRTQLVLAITLMVAALVTLFSYIYISQLLRQRITNVNDTAVQLTSQMAYLAANSVPDLSSTKVDTNNPEAVRRAI
Ga0157376_104489892	3300014969	Miscanthus Rhizosphere	MRRKTKLVLAITFMVAVLVTAFSYVYISELLRQRVTTARESAAQLTSNLAYLAA
Ga0137418_106037733	3300015241	Vadose Zone Soil	MRRKTKIVLGITLMVFVLVTVFSYIYISELLRQRVTSAYETAALLSQQLAYAAYTAQPDL
Ga0137409_107201091	3300015245	Vadose Zone Soil	MRRKTKIVLAITFMVAVLVLGFSYLYISELLRQRVTTAHESAAQLTSNLAYLAANAIPDLSSTKVDTTNPQAMRRAVAYYL
Ga0182007_102209561	3300015262	Rhizosphere	MRRRTKIVLAITFMVAVLVFASSYLYISQLLRQRIATAQETAAQLTSTLAYLATNAAPDLTSTRVDTSKPESVRRAIT
Ga0132255_1014095641	3300015374	Arabidopsis Rhizosphere	MRRKTKIVLAITFMVAVLVLGFSYIYISELLRQRVTTAHESAAQLTSNLAYLAANAIPDLTSTKVDTTNPQAMRR
Ga0182037_119333352	3300016404	Soil	MRRRTQIVLAITFMVATLVSGASYVYISQILRQRIATVHEIAQNQLSQLAYLATNAAPDLSSTRIDTHNPAAV
Ga0187825_100281112	3300017930	Freshwater Sediment	MVAALVLGFSYIYISELLRQRVTTARESAAQLTSNLAYLAANAAPDLSSTKVDTTSPEAMRRAVAY
Ga0187801_104103032	3300017933	Freshwater Sediment	MRRKTQIVLAITFMVAALVSSFSYIYISEILRQQITTAQDMAANLTSQLAHLANDAVPDLTSTRVDT
Ga0187817_103414152	3300017955	Freshwater Sediment	MRRKTKLVLAIALMVAMLASGFSYLYISELLRQRVTTARESAAQLGSNLAYLAANAAPDISSTRVDVNNPQAVRRAITYY
Ga0187778_105651872	3300017961	Tropical Peatland	MRRKTQIVLAITFMVAAMVSAFSYIYISQLLRQQITTAQDTASHLTLEIAYLANDAAPDLSSTKINTNDPAAVRK
Ga0187783_112675391	3300017970	Tropical Peatland	MSRKTKIVLAITFMVAALVSFFSYLYVSEILRQAISNAHEIADQLTNHVAYLADNAVPDLASTRVNTHDPE
Ga0187780_110095892	3300017973	Tropical Peatland	MRRKPLIVLAITFMVAALVSFLSYAYILRILRQQISTTRDTASHLTSQLSYLADRAVPDLTSTRVNTN
Ga0187782_115836811	3300017975	Tropical Peatland	MSRKTKIVLAITFMVAALVSFFSYLYISEILRQAISNAHEIADQLTNHVAYLADNAVPDLASTR
Ga0187805_100822091	3300018007	Freshwater Sediment	MRRRTQIVLAITFMVAVIVSVFSYLHISQLLRQDVASAAETTSTLGSQLAFLADDATPDLTSTRTNTSNAAAVSR
Ga0187788_101658411	3300018032	Tropical Peatland	MSRKTKIVLAITFMVAVLVSYFSYLYISEILRQAITNAHEIADQLTNHVAYLADNAVPDLASTKINT
Ga0187784_108033282	3300018062	Tropical Peatland	MRRRTQIVLAITFMVAALVSFFSYIYISEVLRREVTSADETASELTSHLARLANNAAPDLTSTRVNTNDPE
Ga0066667_123179861	3300018433	Grasslands Soil	VLAITFMVATLVCAFSYIYISQLLRQRVVTAHETAAYLDTQLAYLASNAAPDLTSTRVDTNDPEAVRRAVIYY
Ga0066669_111422592	3300018482	Grasslands Soil	MRRKTKIVLAITFMVAALVSAFSYIYISELLRQRVTTASESAAQLTSNLAYLAANATPDLSSTKVDTTNPEAMRRAVGYYL
Ga0187799_10749921	3300019211	Peatland	MRRRTQIVLAITFMVAALVSYFSYIYISEMLGQEVASADETASELTSQLAHLANNAAPDLTSTRV
Ga0193713_11062572	3300019882	Soil	MRRRTQIVLAITFMVAVLVSAFSYIYISQLLRQQVTTADATAANLTSNLAFLATKAAPDLSSTRIDTSNPQAVRR
Ga0210403_113780531	3300020580	Soil	MRRKTKIVLAITFMVAALVLGFSYIYISELLRQRVTTARESAAQLTSNLAYLAANAAPDLSSTKV
Ga0210391_102085101	3300021433	Soil	MRRKTQIVLAITFMVAAMVSAFSYIYVSQILRQRVTFAHDTAGFLNSQLAYLAANAIP
Ga0210390_100935621	3300021474	Soil	MRRKTQIVFAITFMVAAMVSAFSYIYVSQILRQRVTFAHDTAGFLNSQLAYLAANAIPDL
Ga0126371_137331801	3300021560	Tropical Forest Soil	MRRRTQIVLAITFMVAALVSGASYVYISQILRQRVATAHDTATNLTSQLAYLATSAAPDLSSTRVDTSNPEALRRGI
Ga0212123_106562112	3300022557	Iron-Sulfur Acid Spring	MRRKTKIVLAITFMVAVLVLAFSYIYISELLRQRVTTARESAAQLTSNLAYLAANAAPDLSSTKVDTNDPEAVRRAI
Ga0137417_11620272	3300024330	Vadose Zone Soil	MRRKTKIVLAITFMVAVLVLGFSYIYISELLRQRVTTAHESAGQLTSNLAYLAA
Ga0209171_104762562	3300025320	Iron-Sulfur Acid Spring	MRRKTKIVLAITFMVAVLVLAFSYIYISELLRQRVTTARESAAQLTSNLAYLAANAAPDLSSTKVDT
Ga0208848_11138101	3300025509	Arctic Peat Soil	MRRKTKIVLAITFMVAVLVLTFSYIYISELLRQRVTTARESAAQLTSNLAYLAANAAPDLSSTKVDTANPAATRRAV
Ga0207642_100236801	3300025899	Miscanthus Rhizosphere	MRRRTKIVLAITFMVAALVTSTSYIFISQMLRQRVATAHDTAMYLTSQLAYLSSNAAPDLTSTRVDTNNP
Ga0207642_100979431	3300025899	Miscanthus Rhizosphere	MRRKTKIVLAITFMVAVLVTAFSYVYISELLRQRVTTARESAAQLTSNLAYLAANAAPDLSSTKVDTTNPQA
Ga0207699_105072491	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MRRKTKIVLAITFMVAVLVLAFSYIYISELLRQRVTTARESAAQLTSNLAYLAANAAPDLSSTKVDTTNPQATRR
Ga0207654_113246582	3300025911	Corn Rhizosphere	MRRKTQIVLAITLMVFVLVATFSYIYISELLRQRITSAYETAALLSQQLAYATYNAQPDL
Ga0207695_111197381	3300025913	Corn Rhizosphere	MRRKTQIVLAIAFMVAALVTTYSYIYISQLLRQRIEEVDATASNLSSQLAYLATNAVPDLSSTRVDTGNPE
Ga0207671_101880562	3300025914	Corn Rhizosphere	MVAVLVTGASYVYITQMLRQRIATVHETAMNLASQMAYLASNAAPDLTSTRVDTNNPEAVRRGIA
Ga0207671_102057041	3300025914	Corn Rhizosphere	MRRKTKLVLAITFMVAVLVTAFSYVYISELLRQRVTTARESAAQLTSNLAYLAANAAPDLSSTKVDT
Ga0207663_113376721	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MRRRTQIVLAITFMVAALVSGASYIYISQILHQRISTAHDTAMYLTSQLAYLATNAAPDLSSTRVDT
Ga0207662_106135762	3300025918	Switchgrass Rhizosphere	MRRRTKIVLAITFMVAALVTSTSYIFISQMLRQRVATAHDTAMYLTSQLAYLSSNAAPDLTSTRVDTSNPEAVRRGRGDR
Ga0207709_108015112	3300025935	Miscanthus Rhizosphere	MRRRTKIVLAITFMVAALVTSTSYIFISQMLRQRVATAHDTAMYLTSQLAYLSSNAAPDLTS
Ga0207711_117984852	3300025941	Switchgrass Rhizosphere	MRRGTKLVLAITAMVAVLVTAFSYLYIAEILRQRILQANDVAGRLTEQLAHVATNAAPDLGDTKVDTHNPEALSR
Ga0207679_112132122	3300025945	Corn Rhizosphere	MRRRTKIVLAITFMVAALVTGASYVYISQMLRQRVATAHDTALYLTSQLAYLSSNAAPDLTSTRVDTN
Ga0207702_116765702	3300026078	Corn Rhizosphere	MRRKTKIVLAITFMVAALVLGFSYLYISELLRQRVTTAHESAAQLTSNLAYLAANAAP
Ga0207641_106483692	3300026088	Switchgrass Rhizosphere	MRRKTKIVLAITFMVAVLVTAFSYVYISELLRQRVTTARESAAQLTSNLAYLAANAAPDLSSTKVDTTNPQAMRRA
Ga0209761_10475083	3300026313	Grasslands Soil	MRRRTKIVLAITFMVAVLVSAFSYIYISQLLRQQVTTADATASNLTSNLAFLATKAAPDLSSTRVDTSNPQAVRRAILNPSWAVGP
Ga0209802_10489734	3300026328	Soil	MRRRTKIVLAITFMVAVLVSAFSYIYISQLLRQQVTTADATASNLTSNLAFLATKAAPDLSSTRVDTSNPQA
Ga0209158_10041831	3300026333	Soil	VLAITFMVAALVCAFSYIYISQLLRQRVVTAHETAAHLDTQLAYLASNAAPDLTSTRVDTNDP
Ga0209804_10157511	3300026335	Soil	VLAITFMVATLVCAFSYIYISQLLRQRVVTAHETAAYLDTQLAYLASNAAPD
Ga0257166_10380762	3300026358	Soil	MRRKTKIVLAITFMVAVLVLAFSYIYISELLRQRVTTARESAAQLTSNLAYLAANAAPDLSSTKVDTTNPLA
Ga0209808_10547091	3300026523	Soil	MRRKTKIVLAITFMVAALVSAFSYIYISELLRQRVTTASESAAQLTSNLDYLAAN
Ga0208199_10983091	3300027497	Peatlands Soil	MRRKTQIVLAITFMVAVLVSSFSYIYISYVLRQQIRAAHDNAANLTSQLAYLADNAAPD
Ga0208565_10749932	3300027662	Peatlands Soil	MRRKTQIVLAITFMVAALVSSFSYIYISEILRQQITTAQDIATNLTSQLAHLASDSVQDPSSTRVDTSNPE
Ga0209701_100116834	3300027862	Vadose Zone Soil	VLAITFMVTALVCAFSYIYISQLLRQRVTTAYDSAAQLTSNLSYLAANASPDLSSTRVDTSNP
Ga0209579_103770041	3300027869	Surface Soil	MLRRTKIVLAITVMVTVLAAAFSYLYIFQILNQQVTTAHDTAAYLTTQLAYLAADAAPDLTSTRTNTSKPESVRRATA
Ga0268266_108008522	3300028379	Switchgrass Rhizosphere	MRRKTKIVLGVTVMATALVAVFSYIYISQLLRQRITTAHETAARLTSQLAYLATNAAPDLSSTKVDTSNPVAVRKSLSYY
Ga0308309_101629831	3300028906	Soil	MRRRTQIVLTVTLMVALLVTAFSYIYISQLLRQRINTARDTADNLTSQLAYVATNAVPDLTSTKVDTSKPEAVRKGIEY
Ga0308309_104799051	3300028906	Soil	MRLRTKIVLAITFMVAVLVSVFSYIYISELLRQRINSALESAQHLTANLAFLATNEAPDLSSTRVDTNNPQAVRKAIA
Ga0311333_109921772	3300030114	Fen	MRRRTKIVLAITFMVAVLVLSFSYIYISELLRQRVTTTHDTAAYVTAQLAYQATNAAPDLTSTRVDTNK
Ga0311335_112705301	3300030838	Fen	MRRRTKIVLAITFMVAVLVLSFSYIYISELLRQRVTTTHDTAAYVTAQLAYQATNAAPDLTSTRVDTNKPESVRRA
Ga0170834_1050785701	3300031057	Forest Soil	MRRRTQIVLAITFMVAALVTGASYLYISQILRQGINTAHDTASYLTSQLAFLASNAAPDLSSTRIDTNN
Ga0170834_1133090261	3300031057	Forest Soil	MRLRTKIVLAITFMVAVLVSIFSYIYISELLRQRINSALESAQHLTANLAFLATNEAPDLSSTRVDTNNAQAVRKAIAYYI
Ga0170823_166656312	3300031128	Forest Soil	MRLRTKIVLAITFMVAVLVSIFSYIYISELLRQRINSALESAQHLTANLAFLATNEAPDLSSTRV
Ga0307469_102257901	3300031720	Hardwood Forest Soil	MRRRTKIVLAITFMVAVLVSAFSYIYISQLLRQQVTTADATASNLTSNLAFLATKAAPDLSSTRVDTSKPQAVR
Ga0307469_125048522	3300031720	Hardwood Forest Soil	MVTVLVSVFSYIYISELLRQRVATAHETAALLTSQLAYLATVAAPDLSSTRVDTNNPAAVRRAIAYYLSTDRDLNS
Ga0307475_109406132	3300031754	Hardwood Forest Soil	MRRKTQIVLAITFMVAALVCGFSYIYVSQILRQRVTFAHDTAGFLNSQLAYLAANAIPD
Ga0306923_122319291	3300031910	Soil	MSRKTKIVLAITFMVAALVSYFSYLYISEILRQAITNAHEIADQLTNHVAYLADNAVPDLASTKVNTRDPEAVRRA
Ga0306922_119318562	3300032001	Soil	MSRKTKIVLAITFMVAVLVSYFSYLYISEILRQAITNAHEIADQLTNHVAYLADNAVPDLASTKINTHDPEAVRRAVAY
Ga0335079_102635241	3300032783	Soil	VLAITFMVAALVSFFSYIYISEVLQQEVTSADETASELTSQLARLANNAAPDLTSTRENTNDP
Ga0335079_108094471	3300032783	Soil	MRRKTKIVLAITFMVAAVVSFFSYIYISEILSQEITSAHETANELTSHLARLASDAAPDLTSTRVNT
Ga0335081_101198311	3300032892	Soil	MRKTLIVLAITLMVAALVSSFSYVYVSQILRQQVTAARETAAQLNSQLAFLANNAAPDLSSTRVDTNNPDAVRRAI
Ga0335077_103680491	3300033158	Soil	MVAALVVAFSYIYISQLLRQRITTAQETAALLSAQLAYLATNAAPDLSSTKVDISDPKAVHNAIAYYLGT
Ga0326726_107231162	3300033433	Peat Soil	MRRKSKIVLAITFMVAALVSAFSYIYISQLLRQRVTTADETASYLTSNLAYLATNAAPDLSST

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F053607

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences