Metagenome Family F053540

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F053540
Family Type	Metagenome
Number of Sequences	141
Average Sequence Length	40 residues
Representative Sequence	MDIDTLNYLGYWEVFEISLYLAVMYTGKGFIDEFFNRRLK
Number of Associated Samples	97
Number of Associated Scaffolds	141

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	80.85 %
% of genes near scaffold ends (potentially truncated)	16.31 %
% of genes from short scaffolds (< 2000 bps)	76.60 %
Associated GOLD sequencing projects	85
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.42

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (45.390 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (48.936 % of family members)
Environment Ontology (ENVO)	Unclassified (85.106 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (99.291 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 51.47% β-sheet: 0.00% Coil/Unstructured: 48.53%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.42
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.42
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 141 Family Scaffolds
PF00085	Thioredoxin	7.09
PF03851	UvdE	5.67
PF00565	SNase	5.67
PF08406	CbbQ_C	1.42
PF07700	HNOB	1.42
PF14743	DNA_ligase_OB_2	1.42
PF00478	IMPDH	1.42
PF00730	HhH-GPD	1.42
PF07659	DUF1599	1.42
PF02810	SEC-C	0.71
PF02562	PhoH	0.71
PF00011	HSP20	0.71
PF01327	Pep_deformylase	0.71
PF12728	HTH_17	0.71
PF05838	Glyco_hydro_108	0.71
PF12705	PDDEXK_1	0.71
PF00156	Pribosyltran	0.71

COG ID	Name	Functional Category	% Frequency in 141 Family Scaffolds
COG4294	UV DNA damage repair endonuclease	Replication, recombination and repair [L]	5.67
COG0122	3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase	Replication, recombination and repair [L]	1.42
COG0177	Endonuclease III	Replication, recombination and repair [L]	1.42
COG0714	MoxR-like ATPase	General function prediction only [R]	1.42
COG1059	Thermostable 8-oxoguanine DNA glycosylase	Replication, recombination and repair [L]	1.42
COG1194	Adenine-specific DNA glycosylase, acts on AG and A-oxoG pairs	Replication, recombination and repair [L]	1.42
COG2231	3-Methyladenine DNA glycosylase, HhH-GPD/Endo3 superfamily	Replication, recombination and repair [L]	1.42
COG0071	Small heat shock protein IbpA, HSP20 family	Posttranslational modification, protein turnover, chaperones [O]	0.71
COG0242	Peptide deformylase	Translation, ribosomal structure and biogenesis [J]	0.71
COG1702	Phosphate starvation-inducible protein PhoH, predicted ATPase	Signal transduction mechanisms [T]	0.71
COG1875	Predicted ribonuclease YlaK, contains NYN-type RNase and PhoH-family ATPase domains	General function prediction only [R]	0.71
COG3926	Lysozyme family protein	General function prediction only [R]	0.71

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	70.21 %
Unclassified	root	N/A	29.79 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	47.52 %
Unclassified	root	N/A	29.79 %
Viruses	superkingdom	All Organisms → Viruses	22.70 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	45.39 %
Unclassified	root	N/A	29.79 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	21.28 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	2.13 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	1.42 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.79 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	21.28 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	18.44 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	1.42 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	1.42 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.79 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	21.28 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	18.44 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	1.42 %
unclassified Euryarchaeota	no rank	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota	1.42 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.79 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	21.28 %
Pelagibacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales	18.44 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1.42 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	1.42 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.79 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	21.28 %
Pelagibacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae	18.44 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	1.42 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	1.42 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.79 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	21.28 %
Candidatus Pelagibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	18.44 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1.42 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	1.42 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001949\|GOS2238_1034528	All Organisms → Viruses → Predicted Viral	1536	Open in IMG/M
3300002482\|JGI25127J35165_1026152	All Organisms → Viruses → Predicted Viral	1366	Open in IMG/M
3300002483\|JGI25132J35274_1013423	All Organisms → cellular organisms → Bacteria	2000	Open in IMG/M
3300004097\|Ga0055584_100209090	All Organisms → cellular organisms → Bacteria	1983	Open in IMG/M
3300005057\|Ga0068511_1008466	All Organisms → cellular organisms → Bacteria	1312	Open in IMG/M
3300005057\|Ga0068511_1033073	Not Available	802	Open in IMG/M
3300005400\|Ga0066867_10248712	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	644	Open in IMG/M
3300005427\|Ga0066851_10135972	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	788	Open in IMG/M
3300005430\|Ga0066849_10210816	Not Available	754	Open in IMG/M
3300005514\|Ga0066866_10191879	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	719	Open in IMG/M
3300005523\|Ga0066865_10380897	All Organisms → cellular organisms → Bacteria	536	Open in IMG/M
3300005605\|Ga0066850_10125031	Not Available	958	Open in IMG/M
3300005606\|Ga0066835_10043022	All Organisms → Viruses → Predicted Viral	1329	Open in IMG/M
3300006024\|Ga0066371_10013865	All Organisms → Viruses → Predicted Viral	2152	Open in IMG/M
3300006166\|Ga0066836_10156715	All Organisms → Viruses → Predicted Viral	1342	Open in IMG/M
3300006735\|Ga0098038_1005845	All Organisms → Viruses → Predicted Viral	4987	Open in IMG/M
3300006735\|Ga0098038_1006538	Not Available	4714	Open in IMG/M
3300006735\|Ga0098038_1165970	Not Available	728	Open in IMG/M
3300006735\|Ga0098038_1199538	Not Available	648	Open in IMG/M
3300006735\|Ga0098038_1299385	All Organisms → cellular organisms → Bacteria	500	Open in IMG/M
3300006737\|Ga0098037_1060566	All Organisms → cellular organisms → Bacteria	1350	Open in IMG/M
3300006737\|Ga0098037_1236864	Not Available	588	Open in IMG/M
3300006738\|Ga0098035_1245811	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	590	Open in IMG/M
3300006749\|Ga0098042_1016287	All Organisms → Viruses → Predicted Viral	2242	Open in IMG/M
3300006751\|Ga0098040_1045410	All Organisms → cellular organisms → Bacteria	1376	Open in IMG/M
3300006752\|Ga0098048_1030416	All Organisms → Viruses → Predicted Viral	1760	Open in IMG/M
3300006752\|Ga0098048_1069613	All Organisms → Viruses → Predicted Viral	1085	Open in IMG/M
3300006752\|Ga0098048_1230534	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	543	Open in IMG/M
3300006754\|Ga0098044_1307017	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	606	Open in IMG/M
3300006789\|Ga0098054_1027036	All Organisms → Viruses → Predicted Viral	2258	Open in IMG/M
3300006789\|Ga0098054_1105420	All Organisms → Viruses → Predicted Viral	1054	Open in IMG/M
3300006789\|Ga0098054_1364937	Not Available	510	Open in IMG/M
3300006793\|Ga0098055_1169518	Not Available	836	Open in IMG/M
3300006793\|Ga0098055_1222729	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	713	Open in IMG/M
3300006921\|Ga0098060_1222089	Not Available	513	Open in IMG/M
3300006924\|Ga0098051_1166530	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	580	Open in IMG/M
3300006928\|Ga0098041_1182984	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	672	Open in IMG/M
3300006928\|Ga0098041_1238628	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	580	Open in IMG/M
3300008050\|Ga0098052_1050268	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	1802	Open in IMG/M
3300008952\|Ga0115651_1136154	All Organisms → Viruses → Predicted Viral	1754	Open in IMG/M
3300009071\|Ga0115566_10705271	All Organisms → cellular organisms → Bacteria	559	Open in IMG/M
3300009376\|Ga0118722_1403987	All Organisms → cellular organisms → Bacteria	630	Open in IMG/M
3300009423\|Ga0115548_1135890	All Organisms → cellular organisms → Bacteria	781	Open in IMG/M
3300009476\|Ga0115555_1021984	All Organisms → cellular organisms → Bacteria	3182	Open in IMG/M
3300009550\|Ga0115013_10353176	Not Available	924	Open in IMG/M
3300010148\|Ga0098043_1005577	Not Available	4322	Open in IMG/M
3300010148\|Ga0098043_1017293	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2335	Open in IMG/M
3300010148\|Ga0098043_1023101	All Organisms → Viruses → Predicted Viral	1986	Open in IMG/M
3300010148\|Ga0098043_1055373	All Organisms → cellular organisms → Bacteria	1206	Open in IMG/M
3300010153\|Ga0098059_1259455	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	669	Open in IMG/M
3300010153\|Ga0098059_1335737	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	575	Open in IMG/M
3300012920\|Ga0160423_10378673	All Organisms → cellular organisms → Bacteria	969	Open in IMG/M
3300012920\|Ga0160423_10460980	Not Available	866	Open in IMG/M
3300012920\|Ga0160423_10972817	Not Available	568	Open in IMG/M
3300012928\|Ga0163110_10054118	All Organisms → cellular organisms → Bacteria	2540	Open in IMG/M
3300012928\|Ga0163110_10129215	All Organisms → Viruses → Predicted Viral	1725	Open in IMG/M
3300012952\|Ga0163180_10364522	Not Available	1046	Open in IMG/M
3300012953\|Ga0163179_10423846	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	1084	Open in IMG/M
3300012954\|Ga0163111_12493314	Not Available	526	Open in IMG/M
3300012954\|Ga0163111_12612226	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	515	Open in IMG/M
3300017703\|Ga0181367_1002536	All Organisms → Viruses → Predicted Viral	3371	Open in IMG/M
3300017705\|Ga0181372_1028254	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	952	Open in IMG/M
3300017708\|Ga0181369_1122716	Not Available	526	Open in IMG/M
3300017717\|Ga0181404_1181026	Not Available	504	Open in IMG/M
3300017721\|Ga0181373_1077640	All Organisms → cellular organisms → Bacteria	591	Open in IMG/M
3300017731\|Ga0181416_1149244	All Organisms → cellular organisms → Bacteria	563	Open in IMG/M
3300017757\|Ga0181420_1000659	Not Available	13704	Open in IMG/M
3300017757\|Ga0181420_1103454	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	875	Open in IMG/M
3300017764\|Ga0181385_1000068	Not Available	33824	Open in IMG/M
3300017764\|Ga0181385_1007976	All Organisms → cellular organisms → Archaea	3468	Open in IMG/M
3300017771\|Ga0181425_1154082	All Organisms → cellular organisms → Bacteria	728	Open in IMG/M
3300017775\|Ga0181432_1025252	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1562	Open in IMG/M
3300017775\|Ga0181432_1274747	All Organisms → cellular organisms → Bacteria	533	Open in IMG/M
3300017967\|Ga0181590_10759399	All Organisms → cellular organisms → Bacteria	648	Open in IMG/M
3300018049\|Ga0181572_10555941	All Organisms → cellular organisms → Bacteria	701	Open in IMG/M
3300020247\|Ga0211654_1023035	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	995	Open in IMG/M
3300020247\|Ga0211654_1060875	All Organisms → cellular organisms → Bacteria	568	Open in IMG/M
3300020251\|Ga0211700_1028527	All Organisms → cellular organisms → Bacteria	609	Open in IMG/M
3300020280\|Ga0211591_1012244	All Organisms → cellular organisms → Bacteria	1894	Open in IMG/M
3300020334\|Ga0211593_1010039	All Organisms → cellular organisms → Bacteria	2117	Open in IMG/M
3300020359\|Ga0211610_1175823	All Organisms → cellular organisms → Bacteria	504	Open in IMG/M
3300020377\|Ga0211647_10109431	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	942	Open in IMG/M
3300020389\|Ga0211680_10109400	All Organisms → cellular organisms → Bacteria	1138	Open in IMG/M
3300020392\|Ga0211666_10104428	Not Available	1139	Open in IMG/M
3300020400\|Ga0211636_10019336	Not Available	3132	Open in IMG/M
3300020409\|Ga0211472_10451495	All Organisms → cellular organisms → Bacteria	517	Open in IMG/M
3300020413\|Ga0211516_10397026	Not Available	611	Open in IMG/M
3300020416\|Ga0211644_10351786	All Organisms → cellular organisms → Bacteria	608	Open in IMG/M
3300020421\|Ga0211653_10004421	All Organisms → cellular organisms → Bacteria	7337	Open in IMG/M
3300020421\|Ga0211653_10166979	Not Available	970	Open in IMG/M
3300020421\|Ga0211653_10191097	All Organisms → cellular organisms → Bacteria	899	Open in IMG/M
3300020436\|Ga0211708_10407608	Not Available	557	Open in IMG/M
3300020436\|Ga0211708_10467319	Not Available	518	Open in IMG/M
3300020437\|Ga0211539_10030466	All Organisms → Viruses → Predicted Viral	2116	Open in IMG/M
3300020438\|Ga0211576_10008970	Not Available	6417	Open in IMG/M
3300020438\|Ga0211576_10202562	All Organisms → Viruses → Predicted Viral	1057	Open in IMG/M
3300020439\|Ga0211558_10296867	All Organisms → cellular organisms → Bacteria	757	Open in IMG/M
3300020442\|Ga0211559_10010177	All Organisms → Viruses → Predicted Viral	4893	Open in IMG/M
3300020442\|Ga0211559_10012481	All Organisms → Viruses → Predicted Viral	4375	Open in IMG/M
3300020442\|Ga0211559_10073284	All Organisms → Viruses → Predicted Viral	1665	Open in IMG/M
3300020453\|Ga0211550_10298356	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	755	Open in IMG/M
3300020457\|Ga0211643_10034105	All Organisms → cellular organisms → Bacteria	2565	Open in IMG/M
3300020470\|Ga0211543_10482042	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	591	Open in IMG/M
3300020471\|Ga0211614_10253016	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	768	Open in IMG/M
3300020471\|Ga0211614_10458326	Not Available	565	Open in IMG/M
3300021068\|Ga0206684_1291585	All Organisms → cellular organisms → Bacteria	506	Open in IMG/M
3300021084\|Ga0206678_10412329	All Organisms → cellular organisms → Bacteria	634	Open in IMG/M
3300021185\|Ga0206682_10038696	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	2735	Open in IMG/M
3300021365\|Ga0206123_10099819	Not Available	1389	Open in IMG/M
3300021365\|Ga0206123_10420060	All Organisms → cellular organisms → Bacteria	547	Open in IMG/M
3300021368\|Ga0213860_10121703	All Organisms → Viruses → Predicted Viral	1146	Open in IMG/M
3300025072\|Ga0208920_1026869	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	1218	Open in IMG/M
3300025086\|Ga0208157_1129742	Not Available	576	Open in IMG/M
3300025099\|Ga0208669_1011703	All Organisms → Viruses → Predicted Viral	2424	Open in IMG/M
3300025099\|Ga0208669_1055134	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	899	Open in IMG/M
3300025101\|Ga0208159_1006768	All Organisms → Viruses → Predicted Viral	3352	Open in IMG/M
3300025101\|Ga0208159_1081762	Not Available	609	Open in IMG/M
3300025101\|Ga0208159_1092926	Not Available	550	Open in IMG/M
3300025102\|Ga0208666_1016479	All Organisms → Viruses → Predicted Viral	2413	Open in IMG/M
3300025110\|Ga0208158_1104661	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	663	Open in IMG/M
3300025110\|Ga0208158_1149660	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	530	Open in IMG/M
3300025127\|Ga0209348_1000253	Not Available	30007	Open in IMG/M
3300025127\|Ga0209348_1003259	Not Available	7400	Open in IMG/M
3300025127\|Ga0209348_1039168	All Organisms → Viruses → Predicted Viral	1651	Open in IMG/M
3300025132\|Ga0209232_1001252	Not Available	13952	Open in IMG/M
3300025132\|Ga0209232_1037141	All Organisms → Viruses → Predicted Viral	1838	Open in IMG/M
3300025132\|Ga0209232_1048307	All Organisms → Viruses → Predicted Viral	1564	Open in IMG/M
3300025133\|Ga0208299_1232736	Not Available	528	Open in IMG/M
3300025151\|Ga0209645_1000746	Not Available	16654	Open in IMG/M
3300026257\|Ga0208407_1029767	All Organisms → Viruses → Predicted Viral	1900	Open in IMG/M
3300026257\|Ga0208407_1094326	Not Available	952	Open in IMG/M
3300026260\|Ga0208408_1071723	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	1077	Open in IMG/M
3300027702\|Ga0209036_1201115	Not Available	560	Open in IMG/M
3300027830\|Ga0209359_10137074	Not Available	1063	Open in IMG/M
3300028197\|Ga0257110_1203680	All Organisms → cellular organisms → Bacteria	764	Open in IMG/M
3300029318\|Ga0185543_1087669	All Organisms → cellular organisms → Bacteria	614	Open in IMG/M
3300029319\|Ga0183748_1004821	Not Available	6570	Open in IMG/M
3300029319\|Ga0183748_1005066	Not Available	6352	Open in IMG/M
3300029319\|Ga0183748_1008738	All Organisms → Viruses → Predicted Viral	4384	Open in IMG/M
3300029319\|Ga0183748_1042722	All Organisms → Viruses → Predicted Viral	1347	Open in IMG/M
3300032073\|Ga0315315_10742424	All Organisms → cellular organisms → Bacteria	897	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	100.00%

Habitat	Taxonomy	Distribution
Oceanic	Environmental → Aquatic → Marine → Oceanic	57.45%
Unclassified	Environmental → Aquatic → Marine → Unclassified	25.53%
Strait	Environmental → Aquatic → Marine → Strait	6.38%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	4.26%
Pelagic	Environmental → Aquatic → Marine → Pelagic	3.55%
Coastal	Environmental → Aquatic → Marine → Coastal	2.13%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	0.71%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	52.48%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	25.53%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	6.38%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	4.96%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	3.55%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	2.84%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	2.13%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	1.42%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	0.71%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	48.94%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	25.53%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	6.38%
Surface Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater	4.96%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	2.84%
Pelagic Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine	2.13%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	1.42%
Marine Water	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine Water	1.42%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	1.42%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	1.42%
Seawater	Environmental → Aquatic → Marine → Pelagic → Unclassified → Seawater	1.42%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	0.71%
Seawater	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater	0.71%
Pelagic Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine	0.71%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001949	Marine microbial communities from Panama City, Panama - GS022	Environmental	Open in IMG/M
3300002482	Marine viral communities from the Pacific Ocean - ETNP_2_30	Environmental	Open in IMG/M
3300002483	Marine viral communities from the Pacific Ocean - ETNP_6_30	Environmental	Open in IMG/M
3300004097	Pelagic marine sediment microbial communities from the LTER site Helgoland, North Sea, for post-phytoplankton bloom and carbon turnover studies - OSD3 (Helgoland) metaG	Environmental	Open in IMG/M
3300005057	Marine water microbial communities from the East Sea, Korea with extracellular vesicles - East-Sea-0.2um	Environmental	Open in IMG/M
3300005400	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F12-01SV261	Environmental	Open in IMG/M
3300005427	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV65	Environmental	Open in IMG/M
3300005430	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV69	Environmental	Open in IMG/M
3300005514	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F12-01SV263	Environmental	Open in IMG/M
3300005523	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F12-01SV265	Environmental	Open in IMG/M
3300005605	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV67	Environmental	Open in IMG/M
3300005606	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302SV84	Environmental	Open in IMG/M
3300006024	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_DCM_ad_63m_LV_B	Environmental	Open in IMG/M
3300006166	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302SV91	Environmental	Open in IMG/M
3300006735	Marine viral communities from the Subarctic Pacific Ocean - 5B_ETSP_OMZ_AT15132_CsCl metaG	Environmental	Open in IMG/M
3300006737	Marine viral communities from the Subarctic Pacific Ocean - 5_ETSP_OMZ_AT15132 metaG	Environmental	Open in IMG/M
3300006738	Marine viral communities from the Subarctic Pacific Ocean - 3_ETSP_OMZ_AT15126 metaG	Environmental	Open in IMG/M
3300006749	Marine viral communities from the Subarctic Pacific Ocean - 9_ETSP_OMZ_AT15188 metaG	Environmental	Open in IMG/M
3300006751	Marine viral communities from the Subarctic Pacific Ocean - 7_ETSP_OMZ_AT15161 metaG	Environmental	Open in IMG/M
3300006752	Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaG	Environmental	Open in IMG/M
3300006754	Marine viral communities from the Subarctic Pacific Ocean - 10_ETSP_OMZ_AT15264 metaG	Environmental	Open in IMG/M
3300006789	Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaG	Environmental	Open in IMG/M
3300006793	Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaG	Environmental	Open in IMG/M
3300006921	Marine viral communities from the Subarctic Pacific Ocean - 21_ETSP_OMZ_AT15319 metaG	Environmental	Open in IMG/M
3300006924	Marine viral communities from the Subarctic Pacific Ocean - 14B_ETSP_OMZ_AT15311_CsCl metaG	Environmental	Open in IMG/M
3300006928	Marine viral communities from the Subarctic Pacific Ocean - 8_ETSP_OMZ_AT15162 metaG	Environmental	Open in IMG/M
3300008050	Marine viral communities from the Subarctic Pacific Ocean - 15_ETSP_OMZ_AT15312 metaG	Environmental	Open in IMG/M
3300008952	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 237m, 250-2.7um	Environmental	Open in IMG/M
3300009071	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120405	Environmental	Open in IMG/M
3300009376	Combined Assembly of Gp0137079, Gp0137080	Environmental	Open in IMG/M
3300009423	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100423	Environmental	Open in IMG/M
3300009476	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110407	Environmental	Open in IMG/M
3300009550	Marine eukaryotic phytoplankton communities from Atlantic Ocean - South Atlantic ANT15 Metagenome	Environmental	Open in IMG/M
3300010148	Marine viral communities from the Subarctic Pacific Ocean - 9B_ETSP_OMZ_AT15188_CsCl metaG	Environmental	Open in IMG/M
3300010153	Marine viral communities from the Subarctic Pacific Ocean - 20_ETSP_OMZ_AT15318 metaG	Environmental	Open in IMG/M
3300012920	Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St8 metaG	Environmental	Open in IMG/M
3300012928	Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St17 metaG	Environmental	Open in IMG/M
3300012952	Marine eukaryotic phytoplankton communities from the Atlantic Ocean - Atlantic ANT 4 Metagenome	Environmental	Open in IMG/M
3300012953	Marine eukaryotic phytoplankton communities from the Atlantic Ocean - Atlantic ANT 2 Metagenome	Environmental	Open in IMG/M
3300012954	Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St18 metaG	Environmental	Open in IMG/M
3300017703	Marine viral communities from the Subarctic Pacific Ocean - ?Lowphox_02 viral metaG	Environmental	Open in IMG/M
3300017705	Marine viral communities from the Subarctic Pacific Ocean - Lowphox_08 viral metaG	Environmental	Open in IMG/M
3300017708	Marine viral communities from the Subarctic Pacific Ocean - Lowphox_04 viral metaG	Environmental	Open in IMG/M
3300017717	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 27 SPOT_SRF_2011-10-25	Environmental	Open in IMG/M
3300017721	Marine viral communities from the Subarctic Pacific Ocean - Lowphox_09 viral metaG	Environmental	Open in IMG/M
3300017731	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 39 SPOT_SRF_2013-01-16	Environmental	Open in IMG/M
3300017757	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 43 SPOT_SRF_2013-05-22	Environmental	Open in IMG/M
3300017764	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 8 SPOT_SRF_2010-02-11	Environmental	Open in IMG/M
3300017771	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 48 SPOT_SRF_2013-11-13	Environmental	Open in IMG/M
3300017775	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 55 SPOT_SRF_2014-07-17	Environmental	Open in IMG/M
3300017967	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071411BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018049	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101408AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300020247	Marine microbial communities from Tara Oceans - TARA_B100000902 (ERX556048-ERR598962)	Environmental	Open in IMG/M
3300020251	Marine microbial communities from Tara Oceans - TARA_B100000519 (ERX555940-ERR599040)	Environmental	Open in IMG/M
3300020280	Marine microbial communities from Tara Oceans - TARA_B100001121 (ERX556044-ERR599114)	Environmental	Open in IMG/M
3300020334	Marine microbial communities from Tara Oceans - TARA_B100001121 (ERX555938-ERR599091)	Environmental	Open in IMG/M
3300020359	Marine microbial communities from Tara Oceans - TARA_B100000686 (ERX555921-ERR599117)	Environmental	Open in IMG/M
3300020377	Marine microbial communities from Tara Oceans - TARA_B100000927 (ERX556007-ERR599065)	Environmental	Open in IMG/M
3300020389	Marine microbial communities from Tara Oceans - TARA_B100000809 (ERX556139-ERR599008)	Environmental	Open in IMG/M
3300020392	Marine microbial communities from Tara Oceans - TARA_B100000963 (ERX555916-ERR599163)	Environmental	Open in IMG/M
3300020400	Marine microbial communities from Tara Oceans - TARA_B100001115 (ERX555947-ERR598992)	Environmental	Open in IMG/M
3300020409	Marine microbial communities from Tara Oceans - TARA_A100001403 (ERX555912-ERR599106)	Environmental	Open in IMG/M
3300020413	Marine microbial communities from Tara Oceans - TARA_S200000501 (ERX555962-ERR599092)	Environmental	Open in IMG/M
3300020416	Marine microbial communities from Tara Oceans - TARA_B100001109 (ERX556137-ERR599039)	Environmental	Open in IMG/M
3300020421	Marine microbial communities from Tara Oceans - TARA_B100000902 (ERX556005-ERR599007)	Environmental	Open in IMG/M
3300020436	Marine microbial communities from Tara Oceans - TARA_B100000424 (ERX556009-ERR598984)	Environmental	Open in IMG/M
3300020437	Marine microbial communities from Tara Oceans - TARA_B100000282 (ERX555906-ERR599074)	Environmental	Open in IMG/M
3300020438	Marine microbial communities from Tara Oceans - TARA_B100001094 (ERX555907-ERR598942)	Environmental	Open in IMG/M
3300020439	Marine microbial communities from Tara Oceans - TARA_B100001939 (ERX556062-ERR599029)	Environmental	Open in IMG/M
3300020442	Marine microbial communities from Tara Oceans - TARA_B100002019 (ERX556121-ERR599162)	Environmental	Open in IMG/M
3300020453	Marine microbial communities from Tara Oceans - TARA_B100001758 (ERX556003-ERR598963)	Environmental	Open in IMG/M
3300020457	Marine microbial communities from Tara Oceans - TARA_B100001113 (ERX555941-ERR599014)	Environmental	Open in IMG/M
3300020470	Marine microbial communities from Tara Oceans - TARA_B100000287 (ERX555976-ERR599053)	Environmental	Open in IMG/M
3300020471	Marine microbial communities from Tara Oceans - TARA_B100000214 (ERX556063-ERR599002)	Environmental	Open in IMG/M
3300021068	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M2 100m 12015	Environmental	Open in IMG/M
3300021084	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 80m 12015	Environmental	Open in IMG/M
3300021185	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M2 40m 12015	Environmental	Open in IMG/M
3300021365	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160316_1	Environmental	Open in IMG/M
3300021368	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO550	Environmental	Open in IMG/M
3300025072	Marine viral communities from the Subarctic Pacific Ocean - 19_ETSP_OMZ_AT15317 metaG (SPAdes)	Environmental	Open in IMG/M
3300025086	Marine viral communities from the Subarctic Pacific Ocean - 5_ETSP_OMZ_AT15132 metaG (SPAdes)	Environmental	Open in IMG/M
3300025099	Marine viral communities from the Subarctic Pacific Ocean - 21_ETSP_OMZ_AT15319 metaG (SPAdes)	Environmental	Open in IMG/M
3300025101	Marine viral communities from the Subarctic Pacific Ocean - 9_ETSP_OMZ_AT15188 metaG (SPAdes)	Environmental	Open in IMG/M
3300025102	Marine viral communities from the Subarctic Pacific Ocean - 5B_ETSP_OMZ_AT15132_CsCl metaG (SPAdes)	Environmental	Open in IMG/M
3300025110	Marine viral communities from the Subarctic Pacific Ocean - 8_ETSP_OMZ_AT15162 metaG (SPAdes)	Environmental	Open in IMG/M
3300025127	Marine viral communities from the Pacific Ocean - ETNP_2_30 (SPAdes)	Environmental	Open in IMG/M
3300025132	Marine viral communities from the Pacific Ocean - ETNP_2_60 (SPAdes)	Environmental	Open in IMG/M
3300025133	Marine viral communities from the Subarctic Pacific Ocean - 15_ETSP_OMZ_AT15312 metaG (SPAdes)	Environmental	Open in IMG/M
3300025151	Marine viral communities from the Pacific Ocean - ETNP_6_30 (SPAdes)	Environmental	Open in IMG/M
3300026257	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV69 (SPAdes)	Environmental	Open in IMG/M
3300026260	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV67 (SPAdes)	Environmental	Open in IMG/M
3300027702	Marine microbial communities from the Southern Atlantic Ocean, analyzing organic carbon cycling - DCM_A/KNORR_S2/LV (SPAdes)	Environmental	Open in IMG/M
3300027830	Marine microbial communities from the Southern Atlantic Ocean, analyzing organic carbon cycling - Surface_A/KNORR_S2/LV (SPAdes)	Environmental	Open in IMG/M
3300028197	Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2015_P26_10m	Environmental	Open in IMG/M
3300029318	Marine giant viral communities collected during Tara Oceans survey from station TARA_038 - TARA_Y100000289	Environmental	Open in IMG/M
3300029319	Marine viral communities collected during Tara Oceans survey from station TARA_032 - TARA_A100001516	Environmental	Open in IMG/M
3300032073	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 40m 3416	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GOS2238_10345282	3300001949	Marine	MDLNALNTIGYWEIVEISVYLAVMYTGKGFIDEYFNRRLK*
JGI25127J35165_10261524	3300002482	Marine	MDIEALNYLGYGEVFEISLWLAIMYAGKCYIDDFFNRRLK*
JGI25132J35274_10134234	3300002483	Marine	MDIGALNTLGYGEVFEISLWLAVMYAGKCYIDDFFNRRLK*
Ga0055584_1002090903	3300004097	Pelagic Marine	MDINALNAIGYMEIIEISFYLGIMYTAKGFIDEFFNRRLK*
Ga0068511_10084663	3300005057	Marine Water	MDLEALNMIGYWEIIEISVYIAIMYTGKGFIDEFFNRRLK*
Ga0068511_10330733	3300005057	Marine Water	MDIETLNYLGYGEVMEISLWIAVMYVGKGFIDEFFNRRLK*
Ga0066867_102487122	3300005400	Marine	MDLNALNAIGYWEIVEISVYLAIMYTGKSFIDEFFNRRLK*
Ga0066851_101359722	3300005427	Marine	MDLNALNTIGYWEIVEISVYLAIMYTGKGFIDEFFNRRLK*
Ga0066849_102108164	3300005430	Marine	GNMDLNTLNTIGYWEIVEISIYLAVMYTGKGFIDEFFNRRLK*
Ga0066866_101918792	3300005514	Marine	MDLNTLNTIGYWEIVEISVYLAIMYTGKGFIDEFFNRRLK*
Ga0066865_103808971	3300005523	Marine	TLNYLGYGEVIEISLWLAVMYAGKCYIDDFFNRRLK*
Ga0066850_101250314	3300005605	Marine	MDLNALNSIGYWEIVEISIYLAVMYIGKGFIDEFFNRRQ*
Ga0066835_100430224	3300005606	Marine	MDIETLNYLGYGEVMEISLWIAVMYIGKGFIDEFFNRRLK*
Ga0066371_100138651	3300006024	Marine	MDIDTLNYLGYWEVFEISLYLAVMYTGKGFIDEFFNRRLK*
Ga0066836_101567153	3300006166	Marine	MDLNTLNSIGYWEIVEISIYLAVMYTGKGFIDEFFNRRLK*
Ga0098038_100584512	3300006735	Marine	MDIEALNYLGYGEVFEISLWITIMYVGKGFIDEFFNRRLK*
Ga0098038_10065382	3300006735	Marine	MDIDTLNYLGYWEVFEISLYLAVMYIGKNFIDEYFNRRLK*
Ga0098038_11659701	3300006735	Marine	WGGNMDLNTLNTIGYWEIIEISIYLGIMYTGKSFIDEFFNRRLK*
Ga0098038_11995382	3300006735	Marine	MDLDTLNTIGYWEIIEISIYLAVMYTGKGFIDEFFNRRLK*
Ga0098038_12993852	3300006735	Marine	MDIGTLNMLGYEEIFEISLWLAVMYTGKSFIDEFFNRRLK*
Ga0098037_10605662	3300006737	Marine	MDIDTLNYLGYWEVFEISLYLAVMYTGKNFIDEYFNRRLK*
Ga0098037_12368642	3300006737	Marine	IETLNYLGYGEVLEISLWIAIMYVGKGFIDEFFNRRLK*
Ga0098035_12458112	3300006738	Marine	MDLNSLNAIGYWEIVEISVYLAIMYTGKSFIDEFFNRRLK*
Ga0098042_10162874	3300006749	Marine	MDIGTLNMLGYGEVFEISLWLAVMYTGKSFIDEFFNRRLK*
Ga0098040_10454102	3300006751	Marine	MDLNALNAIGYWDIIEISVYIAIMYTGKGFIDEYFNRRLK*
Ga0098048_10304166	3300006752	Marine	DLNALNSIGYWEIVEISIYLAVMYIGKGFIDEFFNRRQ*
Ga0098048_10696132	3300006752	Marine	MDLNTLNAIGYWEIVEISVYLAIMYTGKGFIDEFFNRRLK*
Ga0098048_12305342	3300006752	Marine	MDLNTLNTIGYWEIVEISIYLAVMYTGKGFIDEFFNRRLK*
Ga0098044_13070171	3300006754	Marine	MDLNALNSIGYWEIVEISIYLAVMYIGKGFIDEFFNRR
Ga0098054_10270361	3300006789	Marine	MDLNTLNDIGYYEIVEISIYLAMMYTGKGFIDEYFNRRLK*
Ga0098054_11054202	3300006789	Marine	MDLDTLNTIGYWEIVEISIYLAVMYTGKGFIDEFFNRRLK*
Ga0098054_13649372	3300006789	Marine	TLNYLGYWEVFEISLYLAVMYTGKGFIDEFFNRRLK*
Ga0098055_11695181	3300006793	Marine	NMDLNTLNAIGYWEIVEISVYLAIMYTGKGFIDEFFNRRLK*
Ga0098055_12227291	3300006793	Marine	MDLNALNSIGYWEIVEISIYLAVMYICKGFIDEFFNRRQ*
Ga0098060_12220893	3300006921	Marine	MDLNALNSIGYWEIVEISIYLAVMYTGKGFIDEFFNRRLK*
Ga0098051_11665302	3300006924	Marine	MDLNALNAIGYWEIVEISIYLAVMYIGKGFIDEFFNRRQ*
Ga0098041_11829842	3300006928	Marine	MDIDTLNYLGYWEVFEISLYLAVMYIGKNFIDEFFNRRLK*
Ga0098041_12386283	3300006928	Marine	MDLNALNAIGYWEIVEISIYLAVMYIGKGFIDEFFNRRLK*
Ga0098052_10502685	3300008050	Marine	MDLNALNSIGYWEIVEISVYLAIMYTGKGFIDEFFNRRLK*
Ga0115651_11361541	3300008952	Marine	IGYYEIVEISIYLAMMYTGKAFIDEYFNRRLKCY*
Ga0115566_107052712	3300009071	Pelagic Marine	MDIDTLNYLGYWEVFEISLYLAVMYIGKSFVDEYFNRRLK*
Ga0118722_14039873	3300009376	Marine	MDLNALNNIGYWDIIEISVYLAIMYTGKGLIDEFFNRRLK*
Ga0115548_11358902	3300009423	Pelagic Marine	IVMDIDTLNYLGYWEVFEISLYLAVMYIGKSFVDEYFNRRLK*
Ga0115555_10219842	3300009476	Pelagic Marine	MDINALNAIGYMEIIEISFYLGIMYTAKGFIDEIFNRRLK*
Ga0115013_103531763	3300009550	Marine	MDIDTLNYLGYGEVFEISLYLAVMYIGKNFIDEFFNKRLK*
Ga0098043_10055777	3300010148	Marine	MDIETLNYLGYGEVFEISLWIALMYIGKGFIDEFFNRRLK*
Ga0098043_10172932	3300010148	Marine	MDLNALNTIGYWEIIEISVYIGIMYTGKGFIDEFFNRRLK*
Ga0098043_10231014	3300010148	Marine	MDIGTLNMLGYGEVFEISLWLAVMYAGKGFIDEYFNRRLK*
Ga0098043_10553732	3300010148	Marine	MDIETLNYLGYGEVFEISLWIAIMYAGKGFIDEFFNRRLK*
Ga0098059_12594552	3300010153	Marine	MDLNTLNTIGYWEIVEISIYLAVMYIGKGFIDEFFNRRQ*
Ga0098059_13357372	3300010153	Marine	MDIDTLNYLGYWEVFEISLCLAVMYTGKGFIDEFFNRRLK*
Ga0160423_103786731	3300012920	Surface Seawater	MDIEALNYLGYAEVFEISLWLAVMYTGKGFIDEFFNGRLK*
Ga0160423_104609802	3300012920	Surface Seawater	MDIETLNYLGYGEVVEISLWIAVMYAGKGFIDEFFNRRLK*
Ga0160423_109728171	3300012920	Surface Seawater	MDIGTLNMLGYGEVFEISLWLAVMYAGKGFIDEFFNRRLK*
Ga0163110_100541185	3300012928	Surface Seawater	VDIETLNYLGYGEVFEISLWLAVMYAGKGFIDEYFNRRLK*
Ga0163110_101292152	3300012928	Surface Seawater	MMDIETLNYLGYGEVFEISLWIALMYIGKGFIDEFFNRRLK*
Ga0163180_103645223	3300012952	Seawater	MDLNALNTIGYWEIVEISVYIAIMYTGKGFIDEYFNRRLK*
Ga0163179_104238462	3300012953	Seawater	MDLNALNTIGYFEIMEISLYLAVMYTGKSFIDEFFNRRLK*
Ga0163111_124933141	3300012954	Surface Seawater	WGGSMDLDTLNTIGYWEIIEISIYLAVMYTGKGFIDEFFNRRLK*
Ga0163111_126122262	3300012954	Surface Seawater	MDLDTLNTIGYWEIIEISIYLAVMYTGKGFIDEFFN
Ga0181367_10025367	3300017703	Marine	MDLNTLNAIGYWEIVEISVYLAIMYTGKSFIDEFFNRRLK
Ga0181372_10282542	3300017705	Marine	MDLNTLNTIGYWEIVEISIYLAVMYIGKGFIDEFFNRRQ
Ga0181369_11227163	3300017708	Marine	VMDLNTLNSIGYWEIVEISIYLTIMYIGKGFIDEYFNRRLK
Ga0181404_11810262	3300017717	Seawater	MDLNALNTIGYWEIIEISVYLGIMYTGKSFIDEFFNRRLK
Ga0181373_10776401	3300017721	Marine	MDIEALNYLGYGEVFEISLWITIMYVGKGFIDEFFNRRLKXIL
Ga0181416_11492441	3300017731	Seawater	TLNYLGYGEVIEISLWLAIMYAGKGFIDEFFNRRLK
Ga0181420_10006593	3300017757	Seawater	MDINALNAIGYMEIIEISCYLGMMYTAKGFIDEFFNRRLK
Ga0181420_11034542	3300017757	Seawater	MDLNALNSIGYWEIVEISVYLAIMYTGKGFIDEFFNRRLK
Ga0181385_10000686	3300017764	Seawater	MDLNVLNTIGYFEIMEISLYLAVMYTGKSFIDEFFNRRLK
Ga0181385_10079762	3300017764	Seawater	MDIGALNTLGYGEVFEISLWLAAMYTGKCYIDDFFNRRLK
Ga0181425_11540823	3300017771	Seawater	MDLNALNTIGYFEIMEISFYIAVMYVGKSFIDEFFNRRLK
Ga0181432_10252524	3300017775	Seawater	MDLNALNDIGYYEIIEISIYIAAMYVGKGFIDEFFNRRQK
Ga0181432_12747472	3300017775	Seawater	MDLNTLNAIGYWEIIEISVYIAIMYAGKGFVDEFFNRRLK
Ga0181590_107593993	3300017967	Salt Marsh	MDIETLNYLGYGEVMEISLWIAVMYVGKGFIDEFFNRRLK
Ga0181572_105559412	3300018049	Salt Marsh	VDIETLNYLGYGEVFEISLWIAVMYTGKGFIDEFFNRRLK
Ga0211654_10230352	3300020247	Marine	MDLNTLNTIGYWEIIEISIYLAVMYTGKGFIDEFFNRRLK
Ga0211654_10608752	3300020247	Marine	NRKKRLRKERRMDLNALNTIGYWEIIEISVYIGIMYTGKGFIDEFFNRRLK
Ga0211700_10285273	3300020251	Marine	MDLNALNTVGYWEIVEISVYLAIMYTGKGFIDEYFNRRLK
Ga0211591_10122443	3300020280	Marine	MDIETLNYLGYGEVFEISLWITIMYVGKGFIDEFFNRRLK
Ga0211593_10100394	3300020334	Marine	MDIETLNYLGYGEVLEISLWITIMYVGKGFIDEFFNRRLK
Ga0211610_11758232	3300020359	Marine	MDLETLNYIGYWEIIEISVYLAIMYTGKQFIDEYFNKRLK
Ga0211647_101094312	3300020377	Marine	MDLDTLNTIGYWEIIEISIYLAVMYTGKGFIDEFFNRRLK
Ga0211680_101094002	3300020389	Marine	VDLNALNAIGYYEIIEISIYLAVMYAGKGFVDEFFNRRQK
Ga0211666_101044284	3300020392	Marine	MDLNALNTIGYWEIVEISVYLAIMYTGKGFIDEYFNRRLK
Ga0211636_1001933612	3300020400	Marine	MDIEALNYLGYTEVFEISLWLAIMYTGKCYIDDFFNRRLK
Ga0211472_104514952	3300020409	Marine	MDIETLNYLGYGEVFEISLWLAVMYAGKGFIDEFFNRRLK
Ga0211516_103970262	3300020413	Marine	MDLNALNTIGYFEIMEISLYLAVMYTGKSFIDEFFNRRLK
Ga0211644_103517862	3300020416	Marine	MDIGTLNMLGYGEVFEISLWLAIMYAGKCYIDDFFNRRLK
Ga0211653_100044216	3300020421	Marine	MDLNALNTIGYWEIIEISLYIAVMYTGKSFIDEFFNRRLK
Ga0211653_101669794	3300020421	Marine	MDIDTLNYLGYWEVFEISLYLAVMYIGKNFIDEFFNRRLK
Ga0211653_101910973	3300020421	Marine	GVIVMDIDTLNYLGYWEVFEISLYLAVMYTGKNFIDEYFNRRLK
Ga0211708_104076081	3300020436	Marine	MDIETLNYLGYGEVFEISLWIAVMYIGKGFIDEFFHRRLK
Ga0211708_104673192	3300020436	Marine	MDLNALNTIGYWEMVEISIYLAVMYTGKGFIDEYFNRRLK
Ga0211539_100304667	3300020437	Marine	MDIETLNYLGYGEVFELSLWITIMYVGKGFIDEFFNRRLK
Ga0211576_1000897011	3300020438	Marine	MDINALNAIGYMEIIEISFYLGMMYTAKGFIDEFFNRRLK
Ga0211576_102025622	3300020438	Marine	MDIDTLNYLGYWEVFEISLYLAVMYIGKSFVDEFFNRRLK
Ga0211558_102968671	3300020439	Marine	MDIETLNYLGYGEVFEISLWLAVMYTGKGFIDEFFNRRLK
Ga0211559_1001017714	3300020442	Marine	VDIETLNYLGYGEVFEISLWIAVMYAGKGFIDEFFNRRLK
Ga0211559_100124817	3300020442	Marine	MDIETLNYLGYGEVVEISLWIAVMYAGKGFIDEFFNRRLK
Ga0211559_100732844	3300020442	Marine	MDIEALNYLGYGEVFEISLWIALMYIGKGFIDEFFNRRLK
Ga0211550_102983562	3300020453	Marine	MDLNALNSIGYWEIVEISIYLAVMYTGKGFIDEFFNRRLK
Ga0211643_100341053	3300020457	Marine	MDIGTLNYLGYGEVFEISLWLAIMYAGKCYIDDFFNRRLK
Ga0211543_104820421	3300020470	Marine	MDIEALNYLGYGEVLEISLWLAIMYAGKGFIDEFFNRRLK
Ga0211614_102530162	3300020471	Marine	MDIDTLNYLGYWEVFEISLYIAVMYIGKNFIDEFFNRRLK
Ga0211614_104583261	3300020471	Marine	MDLNALNTIGYWEIVEISVYLAVMYTGKGFIDEYFNKRLK
Ga0206684_12915852	3300021068	Seawater	MDLNALNTIGYYEIIEISIYLAVMYAGKGFVDEFFNRRQK
Ga0206678_104123293	3300021084	Seawater	MDLNALNTIGYYEIIEISIYLAVMYAGKGFVDEFFNRRQKXY
Ga0206682_100386962	3300021185	Seawater	MDLNALNSIGYWEIVEISIYLAVMYIGKGFIDEFFNRRQ
Ga0206123_100998196	3300021365	Seawater	MDIDTLNYLGYWEVFEISLYLAVMYIGKSFVDEYFNRRLK
Ga0206123_104200602	3300021365	Seawater	MDINALNAIGYMEIIEISFYLGIMYTAKGFIDEFFNRRLK
Ga0213860_101217033	3300021368	Seawater	MDIETLNYLGYGEVFEISLWIALMYIGKGFIDEFFNRRL
Ga0208920_10268692	3300025072	Marine	MDLNALNAIGYWEIVEISVYLAIMYTGKSFIDEFFNRRLK
Ga0208157_11297422	3300025086	Marine	MDIDTLNYLGYWEVFEISLYLAVMYTGKNFIDEYFNRRLK
Ga0208669_10117033	3300025099	Marine	MDIDTLNYLGYWEVFEISLYLAVMYTGKGFIDEFFNRRLK
Ga0208669_10551342	3300025099	Marine	MDLNTLNAIGYWEIVEISVYLAIMYTGKGFIDEFFNRRLK
Ga0208159_10067688	3300025101	Marine	MDIGTLNMLGYGEVFEISLWLAVMYTGKSFIDEFFNRRLK
Ga0208159_10817623	3300025101	Marine	MDIETLNYLGYGEVFEISLWIAIMYAGKGFIDEFFNRRLK
Ga0208159_10929261	3300025101	Marine	LNYLGYGEVFEISLWIALMYIGKGFIDEFFNRRLK
Ga0208666_10164795	3300025102	Marine	MDIEALNYLGYGEVFEISLWITIMYVGKGFIDEFFNRRLK
Ga0208158_11046611	3300025110	Marine	MDLNALNAIGYWEIVEISIYLAVMYIGKGFIDEFFNRRLK
Ga0208158_11496601	3300025110	Marine	MDLNTLNTIGYWEIVEISVYLAIMYIGKGFIDEFFNRRLK
Ga0209348_100025326	3300025127	Marine	MDIEALNYLGYGEVFEISLWLAIMYAGKCYIDDFFNRRLK
Ga0209348_100325915	3300025127	Marine	MDIETLNYLGYGEVMEISLWIAVMYIGKGFIDEFFNRRLK
Ga0209348_10391683	3300025127	Marine	MDIETLNYLGYGEVFEISLWIALMYIGKGFIDEFFNRRLK
Ga0209232_10012525	3300025132	Marine	MDIGTLNMLGYGEVFEISLWLAVMYAGKGFIDEYFNRRLK
Ga0209232_10371412	3300025132	Marine	VDIETLNYLGYGEVFEISLWLAVMYAGKGFIDEYFNRRLK
Ga0209232_10483072	3300025132	Marine	MDLNTLNSIGYWEIVEISIYLTIMYIGKGFIDEYFNRRLK
Ga0208299_12327362	3300025133	Marine	MDLNTLNTIGYWEIVEISIYLAVMYIGKGFIDEFFNRRLK
Ga0209645_100074619	3300025151	Marine	MDIGALNTLGYGEVFEISLWLAVMYAGKCYIDDFFNRRLK
Ga0208407_10297674	3300026257	Marine	MDLNTLNAIGYWEIVEISIYLAVMYIGKGFIDEFFNRRLK
Ga0208407_10943261	3300026257	Marine	MDLNTLNSIGYWEIVEISIYLAVMYTGKGFIDEFFNRRLK
Ga0208408_10717232	3300026260	Marine	MDLNALNTIGYWEIVEISVYLAIMYTGKGFIDEFFNRRQ
Ga0209036_12011152	3300027702	Marine	MDIGTLNMLGYGEVIEISLWLAAMYAGKGFIDEFFNRRLK
Ga0209359_101370741	3300027830	Marine	GTLNMLGYGEVIEISLWLAAMYAGKGFIDEFFNRRLK
Ga0257110_12036803	3300028197	Marine	MDLNALNAIGYFEIMEISFYIAVMYVGKSFIDEFFNRRLK
Ga0185543_10876691	3300029318	Marine	EKIMDIETLNYLGYGEVLEISLWITIMYVGKGFIDEFFNRRLK
Ga0183748_100482112	3300029319	Marine	MDIEALNYLGYGEVLEISLWITVMYVGKGFIDEFFNRRLK
Ga0183748_10050662	3300029319	Marine	MDIETLNYLGYGEVFEISLWLAIMYAGKGFIDEFFNRRLK
Ga0183748_10087382	3300029319	Marine	VDIEALNYLGYGEVFEISLWLAIMYAGKCYIDDFFNRRLK
Ga0183748_10427222	3300029319	Marine	MDLNALNTIGYWEIVEISIYLAVMYTGKGFIDEYFNRRLK
Ga0315315_107424243	3300032073	Seawater	KRLRKERRMDINALNAIGYMEIIEISFYLGMMYTAKGFIDEFFNRRLK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F053540

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences