NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F053521

Metagenome / Metatranscriptome Family F053521

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F053521
Family Type Metagenome / Metatranscriptome
Number of Sequences 141
Average Sequence Length 45 residues
Representative Sequence EKRGLLRLGRSKPEPEPEPEVPAAKVVRQQPVRQAKSKRSGKR
Number of Associated Samples 127
Number of Associated Scaffolds 141

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 0.71 %
% of genes near scaffold ends (potentially truncated) 97.87 %
% of genes from short scaffolds (< 2000 bps) 93.62 %
Associated GOLD sequencing projects 121
AlphaFold2 3D model prediction Yes
3D model pTM-score0.16

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (58.865 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(30.496 % of family members)
Environment Ontology (ENVO) Unclassified
(17.730 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(49.645 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 0.00%    β-sheet: 0.00%    Coil/Unstructured: 100.00%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.16
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 141 Family Scaffolds
PF01424R3H 34.04
PF02527GidB 9.93
PF13614AAA_31 1.42
PF03972MmgE_PrpD 0.71
PF00072Response_reg 0.71
PF01212Beta_elim_lyase 0.71
PF00085Thioredoxin 0.71
PF00155Aminotran_1_2 0.71

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 141 Family Scaffolds
COG1847Predicted RNA-binding protein Jag (SpoIIIJ-associated), conains KH and R3H domainsGeneral function prediction only [R] 34.04
COG035716S rRNA G527 N7-methylase RsmG (former glucose-inhibited division protein B)Translation, ribosomal structure and biogenesis [J] 9.93
COG1167DNA-binding transcriptional regulator, MocR family, contains an aminotransferase domainTranscription [K] 1.42
COG1104Cysteine desulfurase/Cysteine sulfinate desulfinase IscS or related enzyme, NifS familyAmino acid transport and metabolism [E] 0.71
COG4992Acetylornithine/succinyldiaminopimelate/putrescine aminotransferaseAmino acid transport and metabolism [E] 0.71
COG3033TryptophanaseAmino acid transport and metabolism [E] 0.71
COG2873O-acetylhomoserine/O-acetylserine sulfhydrylase, pyridoxal phosphate-dependentAmino acid transport and metabolism [E] 0.71
COG20792-methylcitrate dehydratase PrpDCarbohydrate transport and metabolism [G] 0.71
COG2008Threonine aldolaseAmino acid transport and metabolism [E] 0.71
COG1982Arginine/lysine/ornithine decarboxylaseAmino acid transport and metabolism [E] 0.71
COG1921Seryl-tRNA(Sec) selenium transferaseTranslation, ribosomal structure and biogenesis [J] 0.71
COG0075Archaeal aspartate aminotransferase or a related aminotransferase, includes purine catabolism protein PucGAmino acid transport and metabolism [E] 0.71
COG1003Glycine cleavage system protein P (pyridoxal-binding), C-terminal domainAmino acid transport and metabolism [E] 0.71
COG0626Cystathionine beta-lyase/cystathionine gamma-synthaseAmino acid transport and metabolism [E] 0.71
COG0520Selenocysteine lyase/Cysteine desulfuraseAmino acid transport and metabolism [E] 0.71
COG0436Aspartate/methionine/tyrosine aminotransferaseAmino acid transport and metabolism [E] 0.71
COG0399dTDP-4-amino-4,6-dideoxygalactose transaminaseCell wall/membrane/envelope biogenesis [M] 0.71
COG01567-keto-8-aminopelargonate synthetase or related enzymeCoenzyme transport and metabolism [H] 0.71
COG0112Glycine/serine hydroxymethyltransferaseAmino acid transport and metabolism [E] 0.71
COG0076Glutamate or tyrosine decarboxylase or a related PLP-dependent proteinAmino acid transport and metabolism [E] 0.71


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A58.87 %
All OrganismsrootAll Organisms41.13 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300004092|Ga0062389_103211837All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia612Open in IMG/M
3300004121|Ga0058882_1758453All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae679Open in IMG/M
3300005167|Ga0066672_10518814All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. Tu6071773Open in IMG/M
3300005586|Ga0066691_10666570All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales616Open in IMG/M
3300005712|Ga0070764_10698981All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae625Open in IMG/M
3300006028|Ga0070717_10094967All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales2523Open in IMG/M
3300006172|Ga0075018_10626055Not Available575Open in IMG/M
3300006175|Ga0070712_101844836All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales529Open in IMG/M
3300006176|Ga0070765_100555866All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales1081Open in IMG/M
3300006806|Ga0079220_10584131All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales789Open in IMG/M
3300006806|Ga0079220_11249699All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales618Open in IMG/M
3300007076|Ga0075435_100990802All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales734Open in IMG/M
3300009088|Ga0099830_10321486All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae1239Open in IMG/M
3300009520|Ga0116214_1417127Not Available525Open in IMG/M
3300009521|Ga0116222_1266412Not Available739Open in IMG/M
3300009525|Ga0116220_10061182All Organisms → cellular organisms → Bacteria → Proteobacteria1575Open in IMG/M
3300009683|Ga0116224_10333795Not Available721Open in IMG/M
3300009700|Ga0116217_10274788All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1088Open in IMG/M
3300010046|Ga0126384_10552980All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. Tu60711000Open in IMG/M
3300010343|Ga0074044_10226097All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1239Open in IMG/M
3300010371|Ga0134125_12781019Not Available532Open in IMG/M
3300010373|Ga0134128_11886597All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. Tu6071658Open in IMG/M
3300010379|Ga0136449_101074176Not Available1285Open in IMG/M
3300010860|Ga0126351_1269559Not Available859Open in IMG/M
3300011026|Ga0138566_133235Not Available541Open in IMG/M
3300011054|Ga0138523_1037565Not Available620Open in IMG/M
3300011063|Ga0138537_1066918Not Available617Open in IMG/M
3300011120|Ga0150983_10467900Not Available630Open in IMG/M
3300011120|Ga0150983_11790470Not Available552Open in IMG/M
3300011120|Ga0150983_11884595Not Available951Open in IMG/M
3300011120|Ga0150983_11953416Not Available896Open in IMG/M
3300011120|Ga0150983_14672782Not Available549Open in IMG/M
3300012351|Ga0137386_10232182All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales1326Open in IMG/M
3300012385|Ga0134023_1082913All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. Tu6071624Open in IMG/M
3300012407|Ga0134050_1017155Not Available604Open in IMG/M
3300012494|Ga0157341_1045640Not Available521Open in IMG/M
3300014838|Ga0182030_10336161Not Available1629Open in IMG/M
3300015371|Ga0132258_11248641All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. Tu60711878Open in IMG/M
3300016294|Ga0182041_11728051Not Available579Open in IMG/M
3300017946|Ga0187879_10511927Not Available666Open in IMG/M
3300017948|Ga0187847_10543569Not Available646Open in IMG/M
3300017973|Ga0187780_10005805All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae9208Open in IMG/M
3300018042|Ga0187871_10186988All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1161Open in IMG/M
3300019885|Ga0193747_1056612All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria972Open in IMG/M
3300020062|Ga0193724_1051316All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. Tu6071872Open in IMG/M
3300021171|Ga0210405_10541105All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. Tu6071910Open in IMG/M
3300021374|Ga0213881_10033276Not Available2161Open in IMG/M
3300021402|Ga0210385_10994425Not Available644Open in IMG/M
3300021403|Ga0210397_11089806All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. Tu6071620Open in IMG/M
3300021406|Ga0210386_10199317Not Available1694Open in IMG/M
3300021406|Ga0210386_11369335Not Available594Open in IMG/M
3300021474|Ga0210390_11347047Not Available570Open in IMG/M
3300021474|Ga0210390_11412469Not Available554Open in IMG/M
3300021860|Ga0213851_1379114Not Available905Open in IMG/M
3300022499|Ga0242641_1039820Not Available542Open in IMG/M
3300022522|Ga0242659_1088937Not Available597Open in IMG/M
3300022525|Ga0242656_1009906All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1256Open in IMG/M
3300022529|Ga0242668_1029438Not Available885Open in IMG/M
3300022532|Ga0242655_10071686Not Available900Open in IMG/M
3300022557|Ga0212123_10844328Not Available545Open in IMG/M
3300022709|Ga0222756_1077809Not Available538Open in IMG/M
3300022721|Ga0242666_1142869Not Available581Open in IMG/M
3300024225|Ga0224572_1049698Not Available782Open in IMG/M
3300025898|Ga0207692_10537927All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. Tu6071745Open in IMG/M
3300025905|Ga0207685_10542234All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. Tu6071618Open in IMG/M
3300025905|Ga0207685_10754230Not Available533Open in IMG/M
3300025920|Ga0207649_11330449Not Available568Open in IMG/M
3300025944|Ga0207661_10612131All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. Tu60711000Open in IMG/M
3300025961|Ga0207712_11545014All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. Tu6071595Open in IMG/M
3300026217|Ga0209871_1052992Not Available773Open in IMG/M
3300026864|Ga0209621_1001879All Organisms → cellular organisms → Bacteria1166Open in IMG/M
3300027096|Ga0208099_1005658All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. Tu60711556Open in IMG/M
3300027334|Ga0209529_1079111Not Available558Open in IMG/M
3300027869|Ga0209579_10172849All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae1155Open in IMG/M
3300027894|Ga0209068_10666940Not Available608Open in IMG/M
3300027908|Ga0209006_11540785Not Available501Open in IMG/M
3300028731|Ga0302301_1140109Not Available605Open in IMG/M
3300028806|Ga0302221_10160113All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria989Open in IMG/M
3300028877|Ga0302235_10309353Not Available683Open in IMG/M
3300029910|Ga0311369_11377851Not Available535Open in IMG/M
3300030399|Ga0311353_10133186All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2387Open in IMG/M
3300030531|Ga0210274_1550267Not Available881Open in IMG/M
3300030545|Ga0210271_10933675Not Available557Open in IMG/M
3300030548|Ga0210252_10015762All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria876Open in IMG/M
3300030549|Ga0210257_10234505Not Available564Open in IMG/M
3300030581|Ga0210270_1431471All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. Tu6071722Open in IMG/M
3300030582|Ga0210261_1026940All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria933Open in IMG/M
3300030589|Ga0210255_11329076Not Available511Open in IMG/M
3300030617|Ga0311356_10571809All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1096Open in IMG/M
3300030629|Ga0210268_1347712Not Available515Open in IMG/M
3300030677|Ga0302317_10497373Not Available531Open in IMG/M
3300030693|Ga0302313_10367051Not Available573Open in IMG/M
3300030707|Ga0310038_10127046All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1295Open in IMG/M
3300030737|Ga0302310_10386929Not Available768Open in IMG/M
3300030739|Ga0302311_10957125Not Available544Open in IMG/M
3300030743|Ga0265461_12685074Not Available592Open in IMG/M
3300030840|Ga0074020_11073796Not Available706Open in IMG/M
3300031231|Ga0170824_109834023All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. Tu6071669Open in IMG/M
3300031236|Ga0302324_102270584Not Available670Open in IMG/M
3300031544|Ga0318534_10705215Not Available570Open in IMG/M
3300031561|Ga0318528_10464545Not Available680Open in IMG/M
3300031572|Ga0318515_10627858Not Available570Open in IMG/M
3300031681|Ga0318572_10771586Not Available572Open in IMG/M
3300031681|Ga0318572_10940290Not Available513Open in IMG/M
3300031719|Ga0306917_11290719All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. Tu6071565Open in IMG/M
3300031723|Ga0318493_10185331All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1093Open in IMG/M
3300031736|Ga0318501_10248338All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria941Open in IMG/M
3300031754|Ga0307475_11403963Not Available538Open in IMG/M
3300031770|Ga0318521_10258893Not Available1017Open in IMG/M
3300031793|Ga0318548_10214662Not Available945Open in IMG/M
3300031797|Ga0318550_10308490Not Available768Open in IMG/M
3300031799|Ga0318565_10018050All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales3057Open in IMG/M
3300031846|Ga0318512_10130939Not Available1200Open in IMG/M
3300031897|Ga0318520_10009163All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales4218Open in IMG/M
3300031954|Ga0306926_11051271All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria966Open in IMG/M
3300031996|Ga0308176_11743948All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. Tu6071664Open in IMG/M
3300032039|Ga0318559_10560376Not Available533Open in IMG/M
3300032039|Ga0318559_10612281Not Available508Open in IMG/M
3300032043|Ga0318556_10524362Not Available619Open in IMG/M
3300032068|Ga0318553_10050350All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2049Open in IMG/M
3300032072|Ga0326631_114543All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Leucobacter551Open in IMG/M
3300032074|Ga0308173_11020856All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. Tu6071769Open in IMG/M
3300032076|Ga0306924_11735220Not Available653Open in IMG/M
3300032089|Ga0318525_10553931Not Available587Open in IMG/M
3300032094|Ga0318540_10094139All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1404Open in IMG/M
3300032121|Ga0316040_114380Not Available578Open in IMG/M
3300032121|Ga0316040_119039Not Available525Open in IMG/M
3300032160|Ga0311301_11161719Not Available995Open in IMG/M
3300032515|Ga0348332_11706096All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1051Open in IMG/M
3300032515|Ga0348332_12378045Not Available629Open in IMG/M
3300032515|Ga0348332_14782020Not Available738Open in IMG/M
3300032739|Ga0315741_10653017All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. Tu6071894Open in IMG/M
3300032756|Ga0315742_11268672Not Available764Open in IMG/M
3300032756|Ga0315742_11687236Not Available689Open in IMG/M
3300032805|Ga0335078_12275208Not Available568Open in IMG/M
3300032828|Ga0335080_10009262All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales10295Open in IMG/M
3300032898|Ga0335072_10343097All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1641Open in IMG/M
3300033134|Ga0335073_11519501Not Available645Open in IMG/M
3300033158|Ga0335077_11816913Not Available572Open in IMG/M
3300033803|Ga0314862_0122883Not Available615Open in IMG/M
3300034124|Ga0370483_0004837All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales3695Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil30.50%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil7.80%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa7.80%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil7.09%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil3.55%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil3.55%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere3.55%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil2.84%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil2.84%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland2.13%
Plant LitterEnvironmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter2.13%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds1.42%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil1.42%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.42%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil1.42%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil1.42%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil1.42%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil1.42%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil1.42%
WatershedsEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds0.71%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil0.71%
Iron-Sulfur Acid SpringEnvironmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring0.71%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil0.71%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil0.71%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.71%
Untreated Peat SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil0.71%
PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland0.71%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland0.71%
Bog Forest SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil0.71%
Permafrost SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil0.71%
BogEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Bog0.71%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere0.71%
Exposed RockEnvironmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock0.71%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.71%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere0.71%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere0.71%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere0.71%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.71%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere0.71%
Boreal Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil0.71%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300004092Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3EnvironmentalOpen in IMG/M
3300004121Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF109 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300005167Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121EnvironmentalOpen in IMG/M
3300005586Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140EnvironmentalOpen in IMG/M
3300005712Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4EnvironmentalOpen in IMG/M
3300006028Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaGEnvironmentalOpen in IMG/M
3300006172Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014EnvironmentalOpen in IMG/M
3300006175Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaGEnvironmentalOpen in IMG/M
3300006176Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5EnvironmentalOpen in IMG/M
3300006806Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100EnvironmentalOpen in IMG/M
3300007076Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4Host-AssociatedOpen in IMG/M
3300009088Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaGEnvironmentalOpen in IMG/M
3300009520Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaGEnvironmentalOpen in IMG/M
3300009521Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaGEnvironmentalOpen in IMG/M
3300009525Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaGEnvironmentalOpen in IMG/M
3300009683Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaGEnvironmentalOpen in IMG/M
3300009700Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaGEnvironmentalOpen in IMG/M
3300010046Tropical forest soil microbial communities from Panama - MetaG Plot_36EnvironmentalOpen in IMG/M
3300010343Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1EnvironmentalOpen in IMG/M
3300010371Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1EnvironmentalOpen in IMG/M
3300010373Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4EnvironmentalOpen in IMG/M
3300010379Sb_50d combined assemblyEnvironmentalOpen in IMG/M
3300010860Boreal forest soil eukaryotic communities from Alaska, USA - C5-2 Metatranscriptome (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300011026Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 51 (Metagenome Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300011054Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 1 (Metagenome Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300011063Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 15 (Metagenome Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300011120Combined assembly of Microbial Forest Soil metaTEnvironmentalOpen in IMG/M
3300012351Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012385Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_4_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012407Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_16_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012494Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.2.yng.030610Host-AssociatedOpen in IMG/M
3300014838Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300016294Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178EnvironmentalOpen in IMG/M
3300017946Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10EnvironmentalOpen in IMG/M
3300017948Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10EnvironmentalOpen in IMG/M
3300017973Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MGEnvironmentalOpen in IMG/M
3300018042Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10EnvironmentalOpen in IMG/M
3300019885Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1m2EnvironmentalOpen in IMG/M
3300020062Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a1EnvironmentalOpen in IMG/M
3300021171Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-MEnvironmentalOpen in IMG/M
3300021374Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R08EnvironmentalOpen in IMG/M
3300021402Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-OEnvironmentalOpen in IMG/M
3300021403Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-OEnvironmentalOpen in IMG/M
3300021406Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-OEnvironmentalOpen in IMG/M
3300021474Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-OEnvironmentalOpen in IMG/M
3300021860Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2014 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300022499Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-14-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022522Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-11-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022525Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-4-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022529Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022532Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022557Paint Pots_combined assemblyEnvironmentalOpen in IMG/M
3300022709Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300022721Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300024225Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZU5Host-AssociatedOpen in IMG/M
3300025898Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025905Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025920Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025944Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025961Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026217Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-045 (SPAdes)EnvironmentalOpen in IMG/M
3300026864Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM2H0_O3 (SPAdes)EnvironmentalOpen in IMG/M
3300027096Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF043 (SPAdes)EnvironmentalOpen in IMG/M
3300027334Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O2 (SPAdes)EnvironmentalOpen in IMG/M
3300027869Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027894Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)EnvironmentalOpen in IMG/M
3300027908Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)EnvironmentalOpen in IMG/M
3300028731Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E1_2EnvironmentalOpen in IMG/M
3300028806Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_1EnvironmentalOpen in IMG/M
3300028877Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_3EnvironmentalOpen in IMG/M
3300029910III_Palsa_E2 coassemblyEnvironmentalOpen in IMG/M
3300030399II_Palsa_E2 coassemblyEnvironmentalOpen in IMG/M
3300030531Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO143-VCO038SO (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030545Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO142-VCO033SO (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030548Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO133-ANR016SO (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030549Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO137-ANR102SO (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030581Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO142-VCO031SO (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030582Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO145-ARE022SO (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030589Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO133-ANR019SO (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030617II_Palsa_N2 coassemblyEnvironmentalOpen in IMG/M
3300030629Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO153-ARE093SO (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030677Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N3_3EnvironmentalOpen in IMG/M
3300030693Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N2_2EnvironmentalOpen in IMG/M
3300030707Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG (v2)EnvironmentalOpen in IMG/M
3300030737Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N1_2EnvironmentalOpen in IMG/M
3300030739Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N1_3EnvironmentalOpen in IMG/M
3300030743Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada VCO Co-assemblyEnvironmentalOpen in IMG/M
3300030840Metatranscriptome of forest soil microbial communities from Dalarna County, Sweden - Site 2 - LB 8 (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031236Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1EnvironmentalOpen in IMG/M
3300031544Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26EnvironmentalOpen in IMG/M
3300031561Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26EnvironmentalOpen in IMG/M
3300031572Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19EnvironmentalOpen in IMG/M
3300031681Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20EnvironmentalOpen in IMG/M
3300031719Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)EnvironmentalOpen in IMG/M
3300031723Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23EnvironmentalOpen in IMG/M
3300031736Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21EnvironmentalOpen in IMG/M
3300031754Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515EnvironmentalOpen in IMG/M
3300031770Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17EnvironmentalOpen in IMG/M
3300031793Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21EnvironmentalOpen in IMG/M
3300031797Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23EnvironmentalOpen in IMG/M
3300031799Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21EnvironmentalOpen in IMG/M
3300031846Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19EnvironmentalOpen in IMG/M
3300031897Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16EnvironmentalOpen in IMG/M
3300031954Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)EnvironmentalOpen in IMG/M
3300031996Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2EnvironmentalOpen in IMG/M
3300032039Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21EnvironmentalOpen in IMG/M
3300032043Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24EnvironmentalOpen in IMG/M
3300032068Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21EnvironmentalOpen in IMG/M
3300032072Soil microbial communities from Bohemian Forest, Czech Republic ? CSI2 metaT (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300032074Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1EnvironmentalOpen in IMG/M
3300032076Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)EnvironmentalOpen in IMG/M
3300032089Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23EnvironmentalOpen in IMG/M
3300032094Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25EnvironmentalOpen in IMG/M
3300032121Soil microbial communities from Bohemian Forest, Czech Republic ? CSA3 metaT (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300032160Sb_50d combined assembly (MetaSPAdes)EnvironmentalOpen in IMG/M
3300032515FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)EnvironmentalOpen in IMG/M
3300032739Forest Soil Metatranscriptomics Site 2 LB Combined AssemblyEnvironmentalOpen in IMG/M
3300032756Forest Soil Metatranscriptomics Site 2 Humus Litter Mineral Combined AssemblyEnvironmentalOpen in IMG/M
3300032805Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2EnvironmentalOpen in IMG/M
3300032828Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4EnvironmentalOpen in IMG/M
3300032898Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1EnvironmentalOpen in IMG/M
3300033134Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2EnvironmentalOpen in IMG/M
3300033158Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1EnvironmentalOpen in IMG/M
3300033803Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_0_10EnvironmentalOpen in IMG/M
3300034124Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_06D_14EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Ga0062389_10321183713300004092Bog Forest SoilVQASSQNGGEKRGLLRLGRQKPEPAPEPEVPTTRVVRQQPVRQAKSKRSGNKR*
Ga0058882_175845323300004121Forest SoilKRSLLRLGRSKPEPEPEPEPEGPAAKVVRQQPVRQARSKRSGKR*
Ga0066672_1051881423300005167SoilRADTGQNGTEKRGLLRFGRARAEPEPQDDVPAAKVVRQQPVRQAKSKRSGKR*
Ga0066691_1066657013300005586SoilGRSKAEPEPQDDVPTAKVVRQQPVRQARSKRSGKR*
Ga0070764_1069898123300005712SoilPNGQNGGAKRGLLGLGRAKPEPVAEPEVPATKVVRQQTSKQARSKRSGKR*
Ga0070717_1009496743300006028Corn, Switchgrass And Miscanthus RhizosphereLRLGRAKAEPEPQDDVPAAKVVRQQPVRQAKSKRSGKR*
Ga0075018_1062605513300006172WatershedsTASRQATAAPSPSTGQNGTQKRWPLGLGRSKQEPEPQDDVPAITVERKQPVRQARSKRSGKR*
Ga0070712_10184483613300006175Corn, Switchgrass And Miscanthus RhizosphereDTGQNGTEKRGFLGLGRAKAEPEPQDDVPATRVVRQQPVRQARSKRSGKR*
Ga0070765_10055586633300006176SoilGRAKAEPEPQDDVPTTKVVRQQPVRQAKSKRSGKR*
Ga0079220_1058413113300006806Agricultural SoilGLGRSKAEPEPQDDVPATKVVRQQPVRQARSKRSGKR*
Ga0079220_1124969913300006806Agricultural SoilATTASGPATDQNGSEKRGLLRLGRTKQEPEPQDDVPAARVVRQQPVRQARSKRSGKK*
Ga0075435_10099080213300007076Populus RhizosphereRAKAEPEPQDDVPATKVVRQQPVRQARSKRSGKR*
Ga0099830_1032148613300009088Vadose Zone SoilEKRGLLRLGRSKPEPEPEPEVPAAKVVRQQPVRQARSKRSGKR*
Ga0116214_141712713300009520Peatlands SoilNGAAKRGLLRLGRPKPEPVPEPEVPATKVVRQQPVRQAKSKRSGKR*
Ga0116222_126641213300009521Peatlands SoilTASVGATGQNGTEKRGLLRLGRSKPEPEPEPEVPSAKVVRQQPTRQAKSKRSGKR*
Ga0116220_1006118213300009525Peatlands SoilMRSLLRLGRPKPEPVVEPEVPATKVVRQQTSKQARSKRSGK
Ga0116224_1033379523300009683Peatlands SoilRAKPEPEPQDDVPTAKVVRQQPVRQARSKRSGKR*
Ga0116217_1027478813300009700Peatlands SoilAEKRGLLRLGRAKPEPEPQDDVPTAKVVRQQPVRQARSKRSGKR*
Ga0126384_1055298013300010046Tropical Forest SoilVRGLLRLGRPKAEPEPQDDVPAAKVVRQQPVRQAKSKRSGKR*
Ga0074044_1022609733300010343Bog Forest SoilQNGAEKRGLFGLGRPKAEPEPQDDVPTITVERRQPVKQPKSKRSGKR*
Ga0134125_1278101913300010371Terrestrial SoilMRGLLRLGRAKAEPEPQDDVPAAKVVRQQPVRQAKSKRS
Ga0134128_1188659723300010373Terrestrial SoilRAKAEPEPQDDVPAAKVVRQQPVRQAKSKRSGKR*
Ga0136449_10107417613300010379Peatlands SoilAAAPNGQVGAKRGLLRLGRPKPEPVAEPDAPAARVVRQQPTRQARSKRSGKR*
Ga0126351_126955913300010860Boreal Forest SoilSDHGGARGLLRLGKSKPEPEPVAPQTTTVRQQPVRQTRSKRSGKR*
Ga0138566_13323513300011026Peatlands SoilTGQNSAEKRGLLRLGRAKPEPEPQDDVPTAKVVRQQPVRQARSKRSGKR*
Ga0138523_103756523300011054Peatlands SoilAAKRSLLRLGRPKQEAAPEPEVPATKVVRQQPVRQAKSKRSGKR*
Ga0138537_106691833300011063Peatlands SoilEKRGLLRLGRAKPEPEPQDDVPTAKVVRQQPVRQARSKRSGKR*
Ga0150983_1046790013300011120Forest SoilGLGRKPEPVPEPEVPATKVVRQQPVRQAKSKRSGNR*
Ga0150983_1179047013300011120Forest SoilGSAQNGERRGLLRLGRAKPEPEPVDDVPTTKVVRQQPQRQARSKRSGKH*
Ga0150983_1188459533300011120Forest SoilAARRGLLRLGRQKPEPEPEPEVPAAKVVRQQPVRQAKSKRSGKR*
Ga0150983_1195341613300011120Forest SoilRLGRQKQEPEPVQDDVPTAKVVRQQPVRQAKSKRSGKR*
Ga0150983_1467278223300011120Forest SoilTGQNGTEKRGLLRLGRSKPEPEPEPEVTSAKVVRQQPTRQAKSKRSGKR*
Ga0137386_1023218213300012351Vadose Zone SoilRLGRAKPEPEPQDDVPAAKVVRQQPVRQARSKRSGKR*
Ga0134023_108291313300012385Grasslands SoilTEKRGFLGLGRAKAEPEPQDDVPTTRVVRQQPVRQARSKRSGKR*
Ga0134050_101715523300012407Grasslands SoilGLGRAKAEPEPQDDVPATKVVRQQPVRQARSKRSGKR*
Ga0157341_104564023300012494Arabidopsis RhizosphereDTGQDGTEKRGFLGLGRAKAEPEPQDDVPTTRVVRQQPVRQARSKRSGKR*
Ga0182030_1033616143300014838BogAPGQNGGEKRGLLRLGRQKPEPAPEPEVPTVRVVRQQPVRQAKGKRSGNKR*
Ga0132258_1124864113300015371Arabidopsis RhizosphereQNGTEKRGLLRLGRAKQEPEPQDDVPTAKVVRQQPVRQAKSKRSGKR*
Ga0182041_1172805113300016294SoilTTASRPATGQNGTEKRGLLGLGRAKQEPEPQDDVPTAKVVRQQPVRQAKSKRSGKR
Ga0187879_1051192723300017946PeatlandEKRGLLRLGRSKPEPEPEPEVPAAKVVRQQPVRQAKSKRSGKR
Ga0187847_1054356923300017948PeatlandGEKRGRLRLGRQKQEPAPEPEVPTVRVVRQQPVRQAKNKRSGNKR
Ga0187780_1000580513300017973Tropical PeatlandRGLLRLGRQKQEPAPDPEVPATKVVRQQPVRQARSKRSGKR
Ga0187871_1018698833300018042PeatlandAKLVRGKSEPEPEPEVPAARLVRQQPVRQSRSKRSGKR
Ga0193747_105661233300019885SoilRLGRAKAEPEPQDDVPAAKVVRQQPVRQAKSKRSGKR
Ga0193724_105131633300020062SoilLRLGRAKAEPEPQDDVPAAKVVRQQPVRQAKSKRSGKR
Ga0210405_1054110513300021171SoilRPATGQNGTEKRGLFGLGRAKPEPEPQDDVPAAKVVRQQPVRQAKSKRSGKR
Ga0213881_1003327643300021374Exposed RockKRGLLRLGRSKQEPEPQDDVPTTRVVRQQPVRQAKSKRSGKR
Ga0210385_1099442523300021402SoilLLRLGRPKQEPAPEPEMPVAKVVRQQPVRQAKSKRSGKR
Ga0210397_1108980623300021403SoilEKRGLFGLGRAKPEPEPQDDVPAAKVVRQQPVRQAKSKRSGNKR
Ga0210386_1019931733300021406SoilKRSLLRLGRKPEPEPEPEVPAAKVVRQQPVRQAKSKRSGKR
Ga0210386_1136933523300021406SoilVQASSQNGGEKRGLLRLGRQKPEPAPEPEVPTTRVVRQQPVRQAKSKRSGNKR
Ga0210390_1134704723300021474SoilGLGRSKQEPEPQDDVPAITVERKQPVRQAKSKRSGKR
Ga0210390_1141246913300021474SoilPDSGQSDAEKRGLRWLGRPKQEPELQPEVPVVKVVRQQPVRQTRSKRSGKR
Ga0213851_137911413300021860WatershedsATSRPATGQNGTEKRGLFGLGRAKPEPEPQDDVPAAKVVRQQPVRQARSKRSGKR
Ga0242641_103982023300022499SoilSRQATAVPGPSTGQNGTQKRWPLGLGRSKQEPEPQDDVPAITVERKQPVRQARSKRSGKR
Ga0242659_108893723300022522SoilGTQKRWPLGLGRSKQEPEPQDDVPAITVERKQPVRQARSKRSGKR
Ga0242656_100990633300022525SoilQNGTEKRGLLRLGRAKQEPEPQDDVPTAKVVRQQPVRQAKSKRSGKR
Ga0242668_102943833300022529SoilAKRGLLRLGRPKPEPVAEPEVPATKVVRQQTSKQARSKRSGKR
Ga0242655_1007168613300022532SoilTEKRGLLRLGRAKQEPEPQDDVPTAKVVRQQPVRQAKSKRSGKR
Ga0212123_1084432823300022557Iron-Sulfur Acid SpringAAASATPNDGIKRGRLRLGRQKPEPEPEPEVPVAKVVRQQPVRQAKSKRSGKR
Ga0222756_107780923300022709SoilASRQATAVPGPSTGQNGTQKRWPLGLGLSKQEPEPQDDVPAITVERKQPVRQARSKRSGK
Ga0242666_114286923300022721SoilAAPNGQNGGAKRGLLGLGRPKPEPVVEPEVPATKVVRQQTSKQARSKRSGKR
Ga0224572_104969823300024225RhizosphereGTASRQATAVPSPSTGQNGTQKRWPLGLGRSKQAPEPQDDVPAITVERKQPVRQAKSKRSGKR
Ga0207692_1053792723300025898Corn, Switchgrass And Miscanthus RhizosphereTSGSAPKATPDTGQDGTEKRGFLGLGRAKAEPEPQDDVPTTRVVRQQPVRQARSKRSGKR
Ga0207685_1054223423300025905Corn, Switchgrass And Miscanthus RhizosphereDTGQNGTEKRGFLGLGRAKAEPEPQDDVPTTRVVRQQPVRQARSKRSGKR
Ga0207685_1075423023300025905Corn, Switchgrass And Miscanthus RhizosphereNGTEKRGLLRLGRAKPEPEPQDDVPAAKVVRQQPVRQAKSKRSGKR
Ga0207649_1133044913300025920Corn RhizosphereGQNGTEKRGFLGLGRAKAEPEPQDDVPTTRVVRQQPVRQARSKRSGKR
Ga0207661_1061213113300025944Corn RhizosphereTGQNGTEKRGFLGLGRAKAEPEPQDDVPTTRVVRQQPVRQARSKRSGKR
Ga0207712_1154501423300025961Switchgrass RhizosphereGRAKAEPEPQDDVPAAKVVRQQPVRQAKSKRSGKR
Ga0209871_105299213300026217Permafrost SoilASVPANRPNGGEKRGLLRLGRPKSEPEPEPEVPTAKVVRQQPVRQAKSKRSGKR
Ga0209621_100187913300026864Forest SoilSFGFNPAGSAEPQDDVPAAKVVRQQPVRQAKSKRSGKR
Ga0208099_100565813300027096Forest SoilTASRQATAVPGPSTGQNGTQKRWPLGLGRSKQEPEPQDDVPAITVERKQPVRQARSKRSGKR
Ga0209529_107911123300027334Forest SoilPAPAPASEKRRLPRLGRQKPEPEPVVEVPAAKVVRQQPVRQAKSKRSGGKR
Ga0209579_1017284913300027869Surface SoilEKRGLLRFGKPKPEPEPEPEVPSAKVVRQQPVRQAKSRRSGKR
Ga0209068_1066694023300027894WatershedsPAARRGLLRLGRPKQEPVPEPEVPATKVVRQQPVRQAKSKRSGKR
Ga0209006_1154078513300027908Forest SoilAAERRRLPRLGRQKPEPEPVAEVPTAKVVRQQPVRQAKSKRSGGKR
Ga0302301_114010923300028731PalsaKRGLLRLGRQKQEPAPEPEVPTTKVVRQQPVRQAKSKRSGNKR
Ga0302221_1016011313300028806PalsaGAMRGLLRLGRAKPEPVPEPEVPATKVVRQQPVRQNRNKRSGKR
Ga0302235_1030935323300028877PalsaAAGEKRGLLRLGRQKQEPAPEPEVPTVRVVRQQPVRQAKGKRSGNKR
Ga0311369_1137785113300029910PalsaVQASSQNGGEKRGLLRLGRQKPEPAPEPEVSTTRVVRQQPVRQAKSKRS
Ga0311353_1013318613300030399PalsaRLGRQKQEPVPEPEVPTVRVVRQQPVRQAKGKRSGNKR
Ga0210274_155026733300030531SoilDKRGLLTRFGRQKQEPEPVPDVPATKVVRQQPQRQARSKRSGKR
Ga0210271_1093367513300030545SoilAGEKRGLLRLGRQKQEPAPEPEAPTVRVVRQQPVRQAKGKRSGNKR
Ga0210252_1001576213300030548SoilRSQISAASVGETGQNGTEKRGLLRLGRPKPEPEPEPEVPTAKVVRQQPNRQARSKRSGKR
Ga0210257_1023450513300030549SoilGAMRGLLRLGRPKPEPVPEPEVPATKVVRQQPVRQARSKRSGKN
Ga0210270_143147123300030581SoilEKRGLFGLGRAKPEPEPQDDVPAAKVVRQQPVRQAKSKRSGKR
Ga0210261_102694033300030582SoilGETGQNGTEKRGLLRLGRPKPQPEPEPEVPTAKVVRQQPNRQARSKRSGKR
Ga0210255_1132907623300030589SoilEKRGLLRLGRPKPEPEPEPEVPTAKVVRQQPNRQARSKRSGKR
Ga0311356_1057180933300030617PalsaNGGEKRGLLRLGRQKPEPAPEPEAPTVRVVRQQPVRQAKGKRSGNKR
Ga0210268_134771213300030629SoilEKRGLLRLGRPKPEPEPEPQVPTAKVVRQQPNRQARSKRSGKR
Ga0302317_1049737323300030677PalsaPVLAAGEKRGLLRLGRQKQEPVPEPEVPTVRVVRQQPVRQAKGKRSGNKR
Ga0302313_1036705113300030693PalsaGRQKQEPAPEPEVPTVRVVRQQPVRQAKGKRSGNKR
Ga0310038_1012704633300030707Peatlands SoilAEKRGLLRLGRAKPEPEPQDDVPTAKVVRQQPVRQARSKRSGKR
Ga0302310_1038692923300030737PalsaLAAGEKRGLLRLGRQKPEPVPEPEVPTVRVVRQQPVRQAKGKRSGNKR
Ga0302311_1095712523300030739PalsaNGGEKRGRLRLGRQKQEPAPEPEVPTVRVVRQQPVRQAKNKRSGNKR
Ga0265461_1268507423300030743SoilVQASSQNGGEKRGLLRLGRQKPEPEPEPEVPAAKVVRQHPVRQARSKRSGKR
Ga0074020_1107379613300030840SoilGDKRGLLTRFSRQKPEPEPVQDVPAAKVVRQQPVRQARSKRSGKR
Ga0170824_10983402323300031231Forest SoilGRAKAEPEPQDDVPTAKVVRQQPVRQAKSKRSGKR
Ga0302324_10227058413300031236PalsaPVLPATGQNGGEKRGLRRLGRQKPEPAPEPEVPTVRVVRQQPVRQAKGKRSGNKR
Ga0318534_1070521523300031544SoilQDGAAKRGLLRLGRQKQEPVPEPEAPAAKVVRQQPVRQARSKRSGKR
Ga0318528_1046454513300031561SoilGAKRGLLRLGRQKQEPAPQPEVPTTKVVRQQPVRQARSKRSGKR
Ga0318515_1062785823300031572SoilPVSAARGLLRFGKGKPEPEEVQDIPQAKVVRQQPVRQTRSKRSGNKR
Ga0318572_1077158613300031681SoilLGLGRAKQEPEPQDDVPTAKVVRQQPVRQAKSKRSGKR
Ga0318572_1094029013300031681SoilAKRGLLRLGRKQEPAPEPEAPAAKVVRQQPVRQARSKRSGKR
Ga0306917_1129071913300031719SoilLRLGRAKQEPEPQDDVPTAKVVRQQPVRQARSKRSGKR
Ga0318493_1018533133300031723SoilGRPKQEPEPQDDVPTTKVVRQQPVRQAKSKRSGKR
Ga0318501_1024833833300031736SoilLGRQKQEPAPEPEVPATKVVRQQPVRQAKSKRSGKR
Ga0307475_1140396323300031754Hardwood Forest SoilGLGRPKQEPVPEPEVPATKVVRQQPVRQAKSKRSGKR
Ga0318521_1025889313300031770SoilLGRAKQEPEPQDDVPTAKVVRQQPVRQARSKRSGKR
Ga0318548_1021466223300031793SoilLRFGKGKPEPEEVQDIPQAKVVRQQPVRQTRSKRSGKR
Ga0318550_1030849013300031797SoilGQNGAAKRGLLGLGRQKQEPVPEPEVPTTKVVRQQPVRQAKSKRSGKR
Ga0318565_1001805013300031799SoilPRRSLLRLGRQKQEPAPEPEVPATKVVRQQPVRQAKSKRSGKR
Ga0318512_1013093933300031846SoilAEKRGLLRLGRQKQEPAPEPEAPTTKVVRQQPVRQARSKRSGKR
Ga0318520_1000916313300031897SoilRLGRQKQEPAPEPEVPATKVVRQQPVRQAKSKRSGKR
Ga0306926_1105127133300031954SoilRLGRQKEEPAAEPEVPATKVVRQQPVRQAKSKRSGKR
Ga0308176_1174394823300031996SoilDTGQDGTEKRGFLGLGRAKAEPEPQDDVPTTRVVRQQPVRQARSKRSGKR
Ga0318559_1056037623300032039SoilAKRGLLGLGRQKQEPVPEPEVPTTKVVRQQPVRQAKSKRSGKR
Ga0318559_1061228113300032039SoilFGLLGFGRPKPEPVPEPEVPTTKVVRQQPVRQAKSKRSGKR
Ga0318556_1052436213300032043SoilSLLRLGRQKQEPAPEPEVPATKVVRQQPVRQAKSKRSGKR
Ga0318553_1005035043300032068SoilEKRGLLRLGRQKQEPAPEPEAPTTKVVRQQPVRQARSKRSGKR
Ga0326631_11454323300032072SoilASRPATAAPSPSTGQNGTQKRWPLGLGRSKQAPEPQDDVPAITVERKQPVRQAKSKRSGK
Ga0308173_1102085613300032074SoilPDTGQNGTEKRGFLGLGRAKAEPEPQDDVPTTKVVRQQPVRQAKSKRSGKR
Ga0306924_1173522023300032076SoilRPATGQNGTEKRGLLGLGRAKQEPEPQDDVPTAKVVRQQPVRQAKSKRSGKR
Ga0318525_1055393113300032089SoilAAKRSLLRLGRQKQEPVPEPEVPATKVVRQQPVRQARSKRSGKR
Ga0318540_1009413933300032094SoilGLLRLGRQKQEPAPEPEVPATKVVRQQPVRQAKSKRSGKR
Ga0316040_11438013300032121SoilAVKRGLLRLGRQKPEPEPEPEVPTAKVVRQQPVRQAKSKRSGKR
Ga0316040_11903923300032121SoilTGQDLTEKRGLLRLGRPKPEPEPEPEVPSAKVVRQQPVRQAKSKRSRKR
Ga0311301_1116171913300032160Peatlands SoilTEKRGLLRLGRPKPEPEPEPEVPTAKVVRQQPNRQARSKRSGKR
Ga0348332_1170609633300032515Plant LitterPNGQNGAAKRGLLRLGRPKQEPVPEPEVPAAKVVRQQPVRQAKSKRSGKR
Ga0348332_1237804523300032515Plant LitterANGQTSAASSTPAAAAPATGSNGGEKRSLLRLGRQKPEPAPEPEVAATKVVRTQQARQSKSKRSGKR
Ga0348332_1478202013300032515Plant LitterSPSTGQNGTQKRWPLGLGRSKQAPEPQDDVPAITVERKQPVRQAKSKRSGKR
Ga0315741_1065301713300032739Forest SoilKRSLLRLGRSKPEPEPEPEPEGPAAKVVRQQPVRQARSKRSGKR
Ga0315742_1126867223300032756Forest SoilLGRPKPEPVVEPEVPATKVVRQQTSKQARSKRSGKR
Ga0315742_1168723623300032756Forest SoilEKRGGLLRLGRQKQEPVPEPEVPTVRVVRQQPVRQAKGKRSGNKR
Ga0335078_1227520813300032805SoilRGLLRLGRQKEEPAPEPEAPATKVVRQQPVRQARSKRSGKH
Ga0335080_1000926213300032828SoilKRGLLRLGRAKQEPEPQDDVPTAKVVRQQPVRQAKSKRSGKR
Ga0335072_1034309713300032898SoilGGGLGRLFGRSKPAPEPEEEPEKVTVRQQPVRQTRSKRSGKR
Ga0335073_1151950113300033134SoilRSKEEPQDDVPVAPQTKVVRQQPVRQARSKRGNSGKR
Ga0335077_1181691323300033158SoilLGRQKEEPAPEPEAPATKVVRQQPVRQARSKRSGKH
Ga0314862_0122883_425_6133300033803PeatlandTSSRPATTASRPATGQNGTEKRGLLGFGRAKQEPEPQDDVPTAKVVRQQPVRQARAKRSGKR
Ga0370483_0004837_3_1193300034124Untreated Peat SoilRLGRQKPEPAPEPEAPTVRVVRQQPVRQAKGKRSGNKR


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