Metagenome / Metatranscriptome Family F053478

Basic Information
Family ID	F053478
Family Type	Metagenome / Metatranscriptome
Number of Sequences	141
Average Sequence Length	63 residues
Representative Sequence	LNPTLPVYEGYTPAWGQANAEQLWGQAHADVIKNGMKVADAVDKAFKRCSEIFAKVTM
Number of Associated Samples	122
Number of Associated Scaffolds	141

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.71 %
% of genes near scaffold ends (potentially truncated)	95.04 %
% of genes from short scaffolds (< 2000 bps)	97.87 %
Associated GOLD sequencing projects	117
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.49

Most Common Taxonomy
Group	Bacteria (85.816 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (23.404 % of family members)
Environment Ontology (ENVO)	Unclassified (18.440 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (40.426 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 45.35% β-sheet: 0.00% Coil/Unstructured: 54.65%
Feature Viewer

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Pfam ID	Name	% Frequency in 141 Family Scaffolds
PF00528	BPD_transp_1	20.57
PF13416	SBP_bac_8	1.42
PF03466	LysR_substrate	1.42
PF00239	Resolvase	0.71
PF02796	HTH_7	0.71
PF00370	FGGY_N	0.71
PF11329	DUF3131	0.71
PF13490	zf-HC2	0.71

COG ID	Name	Functional Category	% Frequency in 141 Family Scaffolds
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	0.71
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	0.71

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	85.82 %
Unclassified	root	N/A	14.18 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	85.82 %
Unclassified	root	N/A	14.18 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	85.82 %
Unclassified	root	N/A	14.18 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	48.23 %
Unclassified	root	N/A	14.18 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.42 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	1.42 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	46.81 %
Unclassified	root	N/A	14.18 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	1.42 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.71 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.71 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.71 %

Name	Rank	Taxonomy	Distribution
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	29.79 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	14.89 %
Unclassified	root	N/A	14.18 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1.42 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.71 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.71 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.71 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	29.79 %
Unclassified	root	N/A	14.18 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	1.42 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	1.42 %
Geminicoccaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Geminicoccaceae	0.71 %
Oscillatoriophycideae	subclass	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae	0.71 %
unclassified Rhodospirillales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales	0.71 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	0.71 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.71 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	29.79 %
Unclassified	root	N/A	14.18 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1.42 %
Rhodopila	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila	1.42 %
Arboricoccus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Geminicoccaceae → Arboricoccus	0.71 %
Rhodospirillales bacterium URHD0017	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	0.71 %
unclassified Myxococcales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales	0.71 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.71 %
Chroococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Chroococcales	0.71 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	29.79 %
Unclassified	root	N/A	14.18 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1.42 %
Rhodopila	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila	1.42 %
Myxococcales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium	0.71 %
Arboricoccus pini	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Geminicoccaceae → Arboricoccus → Arboricoccus pini	0.71 %
Aphanothecaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Chroococcales → Aphanothecaceae	0.71 %
Rhodospirillales bacterium URHD0017	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	0.71 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.71 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	29.79 %
Unclassified	root	N/A	14.18 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1.42 %
Rhodopila	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila	1.42 %
Halothece cluster	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Chroococcales → Aphanothecaceae → Halothece cluster	0.71 %
Myxococcales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium	0.71 %
Arboricoccus pini	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Geminicoccaceae → Arboricoccus → Arboricoccus pini	0.71 %
Rhodospirillales bacterium URHD0017	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	0.71 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.71 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	29.79 %
Unclassified	root	N/A	14.18 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1.42 %
Rhodopila	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila	1.42 %
Halothece	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Chroococcales → Aphanothecaceae → Halothece cluster → Halothece	0.71 %
Myxococcales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium	0.71 %
Arboricoccus pini	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Geminicoccaceae → Arboricoccus → Arboricoccus pini	0.71 %
Rhodospirillales bacterium URHD0017	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	0.71 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.71 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	29.79 %
Unclassified	root	N/A	14.18 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1.42 %
Rhodopila	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila	1.42 %
unclassified Halothece	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Chroococcales → Aphanothecaceae → Halothece cluster → Halothece → unclassified Halothece	0.71 %
Myxococcales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium	0.71 %
Arboricoccus pini	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Geminicoccaceae → Arboricoccus → Arboricoccus pini	0.71 %
Rhodospirillales bacterium URHD0017	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	0.71 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.71 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	29.79 %
Unclassified	root	N/A	14.18 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1.42 %
Rhodopila	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila	1.42 %
Halothece sp. PCC 7418	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Chroococcales → Aphanothecaceae → Halothece cluster → Halothece → unclassified Halothece → Halothece sp. PCC 7418	0.71 %
Myxococcales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium	0.71 %
Arboricoccus pini	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Geminicoccaceae → Arboricoccus → Arboricoccus pini	0.71 %
Rhodospirillales bacterium URHD0017	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	0.71 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.71 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2209111022\|2221210121	All Organisms → cellular organisms → Bacteria	914	Open in IMG/M
3300000567\|JGI12270J11330_10190654	All Organisms → cellular organisms → Bacteria	712	Open in IMG/M
3300004092\|Ga0062389_104462623	All Organisms → cellular organisms → Bacteria	527	Open in IMG/M
3300005355\|Ga0070671_101633699	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	571	Open in IMG/M
3300005364\|Ga0070673_101665801	Not Available	603	Open in IMG/M
3300005434\|Ga0070709_10192787	All Organisms → cellular organisms → Bacteria	1439	Open in IMG/M
3300005466\|Ga0070685_10807656	All Organisms → cellular organisms → Bacteria	692	Open in IMG/M
3300005535\|Ga0070684_101639635	Not Available	607	Open in IMG/M
3300005539\|Ga0068853_102155446	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Chroococcales → Aphanothecaceae → Halothece cluster → Halothece → unclassified Halothece → Halothece sp. PCC 7418	540	Open in IMG/M
3300005543\|Ga0070672_101280134	All Organisms → cellular organisms → Bacteria	654	Open in IMG/M
3300005591\|Ga0070761_10248888	All Organisms → cellular organisms → Bacteria	1062	Open in IMG/M
3300005614\|Ga0068856_100257842	All Organisms → cellular organisms → Bacteria	1759	Open in IMG/M
3300005842\|Ga0068858_101978868	All Organisms → cellular organisms → Bacteria	576	Open in IMG/M
3300006052\|Ga0075029_100624331	All Organisms → cellular organisms → Bacteria	722	Open in IMG/M
3300006059\|Ga0075017_100577772	All Organisms → cellular organisms → Bacteria	858	Open in IMG/M
3300006059\|Ga0075017_100910279	All Organisms → cellular organisms → Bacteria	683	Open in IMG/M
3300006173\|Ga0070716_101513668	All Organisms → cellular organisms → Bacteria	549	Open in IMG/M
3300006175\|Ga0070712_100470054	All Organisms → cellular organisms → Bacteria	1050	Open in IMG/M
3300006175\|Ga0070712_101387235	All Organisms → cellular organisms → Bacteria	613	Open in IMG/M
3300006358\|Ga0068871_102377037	Not Available	505	Open in IMG/M
3300006804\|Ga0079221_11303570	All Organisms → cellular organisms → Bacteria	571	Open in IMG/M
3300006881\|Ga0068865_101294480	Not Available	648	Open in IMG/M
3300006893\|Ga0073928_10250211	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1355	Open in IMG/M
3300006954\|Ga0079219_11321108	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	637	Open in IMG/M
3300009093\|Ga0105240_12028928	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	597	Open in IMG/M
3300009623\|Ga0116133_1204848	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	531	Open in IMG/M
3300009645\|Ga0116106_1246408	All Organisms → cellular organisms → Bacteria	568	Open in IMG/M
3300009784\|Ga0123357_10680863	All Organisms → cellular organisms → Bacteria	746	Open in IMG/M
3300009826\|Ga0123355_11134769	All Organisms → cellular organisms → Bacteria	808	Open in IMG/M
3300009826\|Ga0123355_11450566	All Organisms → cellular organisms → Bacteria	674	Open in IMG/M
3300009826\|Ga0123355_11454800	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	672	Open in IMG/M
3300010049\|Ga0123356_12995594	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	590	Open in IMG/M
3300010049\|Ga0123356_13175671	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	572	Open in IMG/M
3300010361\|Ga0126378_12212611	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	627	Open in IMG/M
3300010373\|Ga0134128_12112693	Not Available	620	Open in IMG/M
3300010375\|Ga0105239_12934584	Not Available	556	Open in IMG/M
3300010866\|Ga0126344_1376702	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	542	Open in IMG/M
3300011120\|Ga0150983_15914403	All Organisms → cellular organisms → Bacteria	510	Open in IMG/M
3300012212\|Ga0150985_101287780	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	622	Open in IMG/M
3300012212\|Ga0150985_107352510	All Organisms → cellular organisms → Bacteria	960	Open in IMG/M
3300012469\|Ga0150984_100138867	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	3289	Open in IMG/M
3300012469\|Ga0150984_109559214	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	829	Open in IMG/M
3300012931\|Ga0153915_11157838	All Organisms → cellular organisms → Bacteria	903	Open in IMG/M
3300012957\|Ga0164303_11011397	All Organisms → cellular organisms → Bacteria	592	Open in IMG/M
3300013297\|Ga0157378_11815310	Not Available	658	Open in IMG/M
3300014200\|Ga0181526_10574921	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	712	Open in IMG/M
3300014325\|Ga0163163_12178233	Not Available	614	Open in IMG/M
3300014497\|Ga0182008_10165154	All Organisms → cellular organisms → Bacteria	1116	Open in IMG/M
3300014501\|Ga0182024_11154670	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	910	Open in IMG/M
3300014657\|Ga0181522_10394040	All Organisms → cellular organisms → Bacteria	828	Open in IMG/M
3300014745\|Ga0157377_11650825	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	515	Open in IMG/M
3300015371\|Ga0132258_13563607	Not Available	1065	Open in IMG/M
3300015374\|Ga0132255_104153860	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	614	Open in IMG/M
3300016357\|Ga0182032_11751684	All Organisms → cellular organisms → Bacteria → Proteobacteria	542	Open in IMG/M
3300017946\|Ga0187879_10650075	Not Available	586	Open in IMG/M
3300018040\|Ga0187862_10863940	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	520	Open in IMG/M
3300018047\|Ga0187859_10300753	All Organisms → cellular organisms → Bacteria	868	Open in IMG/M
3300019181\|Ga0184594_106022	All Organisms → cellular organisms → Bacteria	935	Open in IMG/M
3300019240\|Ga0181510_1451133	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	638	Open in IMG/M
3300019258\|Ga0181504_1388201	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	581	Open in IMG/M
3300019787\|Ga0182031_1366535	All Organisms → cellular organisms → Bacteria	1592	Open in IMG/M
3300021181\|Ga0210388_11696587	Not Available	523	Open in IMG/M
3300021401\|Ga0210393_11278809	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	589	Open in IMG/M
3300021403\|Ga0210397_10939116	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	670	Open in IMG/M
3300021404\|Ga0210389_11217215	Not Available	579	Open in IMG/M
3300021407\|Ga0210383_11306183	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	606	Open in IMG/M
3300021479\|Ga0210410_10835680	All Organisms → cellular organisms → Bacteria	807	Open in IMG/M
3300021855\|Ga0213854_1273312	All Organisms → cellular organisms → Bacteria	803	Open in IMG/M
3300022506\|Ga0242648_1035567	All Organisms → cellular organisms → Bacteria	709	Open in IMG/M
3300022511\|Ga0242651_1046068	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	529	Open in IMG/M
3300022527\|Ga0242664_1136718	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	532	Open in IMG/M
3300022527\|Ga0242664_1146957	Not Available	518	Open in IMG/M
3300022527\|Ga0242664_1151001	Not Available	513	Open in IMG/M
3300022528\|Ga0242669_1065911	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	647	Open in IMG/M
3300022529\|Ga0242668_1037811	All Organisms → cellular organisms → Bacteria	815	Open in IMG/M
3300022530\|Ga0242658_1021377	All Organisms → cellular organisms → Bacteria	1171	Open in IMG/M
3300022530\|Ga0242658_1135676	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	622	Open in IMG/M
3300022713\|Ga0242677_1054818	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	593	Open in IMG/M
3300022715\|Ga0242678_1066700	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	550	Open in IMG/M
3300022716\|Ga0242673_1035445	All Organisms → cellular organisms → Bacteria	786	Open in IMG/M
3300022716\|Ga0242673_1065329	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	643	Open in IMG/M
3300022717\|Ga0242661_1067408	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	699	Open in IMG/M
3300022722\|Ga0242657_1055372	All Organisms → cellular organisms → Bacteria	882	Open in IMG/M
3300022722\|Ga0242657_1104770	All Organisms → cellular organisms → Bacteria	701	Open in IMG/M
3300022722\|Ga0242657_1223885	Not Available	529	Open in IMG/M
3300025627\|Ga0208220_1155706	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	579	Open in IMG/M
3300025703\|Ga0208357_1030902	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila	1902	Open in IMG/M
3300025913\|Ga0207695_10636925	All Organisms → cellular organisms → Bacteria	947	Open in IMG/M
3300025915\|Ga0207693_11165232	All Organisms → cellular organisms → Bacteria	583	Open in IMG/M
3300025916\|Ga0207663_10895013	Not Available	709	Open in IMG/M
3300025921\|Ga0207652_10540957	All Organisms → cellular organisms → Bacteria	1047	Open in IMG/M
3300025940\|Ga0207691_10333083	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	1300	Open in IMG/M
3300025949\|Ga0207667_10614725	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium	1095	Open in IMG/M
3300027303\|Ga0208999_1031173	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	795	Open in IMG/M
3300027869\|Ga0209579_10446803	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	701	Open in IMG/M
3300027889\|Ga0209380_10608924	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	632	Open in IMG/M
3300027915\|Ga0209069_10749775	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	578	Open in IMG/M
3300027986\|Ga0209168_10024460	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila	3380	Open in IMG/M
3300027986\|Ga0209168_10073989	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1784	Open in IMG/M
3300028562\|Ga0302151_10181523	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	717	Open in IMG/M
3300028740\|Ga0302294_10024707	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1397	Open in IMG/M
3300028745\|Ga0302267_10051125	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2326	Open in IMG/M
3300028788\|Ga0302189_10393169	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	545	Open in IMG/M
3300029701\|Ga0222748_1056138	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	687	Open in IMG/M
3300029951\|Ga0311371_12187545	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	578	Open in IMG/M
3300029952\|Ga0311346_11449991	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	516	Open in IMG/M
3300029955\|Ga0311342_11119750	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	573	Open in IMG/M
3300029956\|Ga0302150_10110682	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1054	Open in IMG/M
3300029986\|Ga0302188_10485658	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	503	Open in IMG/M
3300030519\|Ga0302193_10534587	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	574	Open in IMG/M
3300030528\|Ga0210277_10625434	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	511	Open in IMG/M
3300030528\|Ga0210277_11039481	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1163	Open in IMG/M
3300030575\|Ga0210288_1270377	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	502	Open in IMG/M
3300030582\|Ga0210261_1155548	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	575	Open in IMG/M
3300030588\|Ga0210283_1173872	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	501	Open in IMG/M
3300030626\|Ga0210291_11599256	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Geminicoccaceae → Arboricoccus → Arboricoccus pini	649	Open in IMG/M
3300030739\|Ga0302311_11048346	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	513	Open in IMG/M
3300030743\|Ga0265461_10186482	All Organisms → cellular organisms → Bacteria	1243	Open in IMG/M
3300030764\|Ga0265720_1013154	All Organisms → cellular organisms → Bacteria	599	Open in IMG/M
3300030836\|Ga0265767_100875	All Organisms → cellular organisms → Bacteria	1378	Open in IMG/M
3300030917\|Ga0075382_11791813	All Organisms → cellular organisms → Bacteria	871	Open in IMG/M
3300030978\|Ga0265757_102165	All Organisms → cellular organisms → Bacteria	883	Open in IMG/M
3300030978\|Ga0265757_109776	All Organisms → cellular organisms → Bacteria	540	Open in IMG/M
3300031234\|Ga0302325_11132319	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1050	Open in IMG/M
3300031446\|Ga0170820_12456636	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	563	Open in IMG/M
3300031799\|Ga0318565_10643375	Not Available	509	Open in IMG/M
3300031890\|Ga0306925_11057107	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	824	Open in IMG/M
3300031954\|Ga0306926_10898002	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1061	Open in IMG/M
3300031996\|Ga0308176_12613643	Not Available	538	Open in IMG/M
3300032072\|Ga0326631_110417	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	612	Open in IMG/M
3300032515\|Ga0348332_12333441	Not Available	512	Open in IMG/M
3300032515\|Ga0348332_13141571	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	533	Open in IMG/M
3300032739\|Ga0315741_11144517	All Organisms → cellular organisms → Bacteria	696	Open in IMG/M
3300032756\|Ga0315742_10462411	All Organisms → cellular organisms → Bacteria	1040	Open in IMG/M
3300032756\|Ga0315742_13535510	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	504	Open in IMG/M
3300032898\|Ga0335072_11434825	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	594	Open in IMG/M
3300032898\|Ga0335072_11552344	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	562	Open in IMG/M
3300032954\|Ga0335083_11149230	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	604	Open in IMG/M
3300032955\|Ga0335076_11765571	Not Available	508	Open in IMG/M
3300033134\|Ga0335073_11529850	All Organisms → cellular organisms → Bacteria	642	Open in IMG/M
3300033983\|Ga0371488_0496722	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	552	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	79.43%
Host-Associated	Host-Associated	20.57%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	67.38%
Plants	Host-Associated → Plants	16.31%
Aquatic	Environmental → Aquatic	12.06%
Arthropoda	Host-Associated → Arthropoda	4.26%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	56.74%
Peat	Environmental → Terrestrial → Peat	9.22%
Freshwater	Environmental → Aquatic → Freshwater	8.51%
Rhizosphere	Host-Associated → Plants → Rhizosphere	8.51%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.38%
Digestive System	Host-Associated → Arthropoda → Digestive System	4.26%
Sediment	Environmental → Aquatic → Sediment	2.84%
Plant Litter	Environmental → Terrestrial → Plant Litter	1.42%
Roots	Host-Associated → Plants → Roots	1.42%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.71%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	42.55%
Loam	Environmental → Terrestrial → Soil → Loam	9.22%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	9.22%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	7.80%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.96%
Gut	Host-Associated → Arthropoda → Digestive System → Gut	4.26%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.26%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.26%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.55%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.84%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.84%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	1.42%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.42%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.71%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.71%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	28.37%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	10.64%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	9.22%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.38%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	5.67%
Unclassified	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified	4.26%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.26%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.26%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.55%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.55%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.84%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.84%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.84%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	2.13%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.42%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.42%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.42%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	1.42%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.42%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.71%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.71%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.71%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	23.40%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	5.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.96%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.26%
Termite Gut	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut	4.26%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	3.55%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	3.55%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.84%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.84%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.13%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.13%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	2.13%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.13%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.13%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.42%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	1.42%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.42%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	1.42%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.42%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.42%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.42%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	1.42%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.42%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	1.42%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.42%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.42%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.42%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	1.42%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	0.71%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.71%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.71%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.71%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.71%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.71%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.71%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.71%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.71%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.71%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.71%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.71%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.71%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.71%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.71%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.71%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.71%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.71%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.71%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2209111022	Grass soil microbial communities from Rothamsted Park, UK - Chitin enrichment	Environmental	Open in IMG/M
3300000567	Peat soil microbial communities from Weissenstadt, Germany - SII-2010	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009623	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_10	Environmental	Open in IMG/M
3300009645	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_40	Environmental	Open in IMG/M
3300009784	Embiratermes neotenicus P4 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P4	Host-Associated	Open in IMG/M
3300009826	Embiratermes neotenicus P1 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P1	Host-Associated	Open in IMG/M
3300010049	Embiratermes neotenicus P3 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P3	Host-Associated	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010866	Boreal forest soil eukaryotic communities from Alaska, USA - C1-3 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014200	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014497	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG	Host-Associated	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014657	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG	Environmental	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300018040	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_150	Environmental	Open in IMG/M
3300018047	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10	Environmental	Open in IMG/M
3300019181	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZI3 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019240	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019258	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019787	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (PacBio error correction)	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021855	Metatranscriptome of freshwater sediment microbial communities from pre-fracked creek in Pennsylvania, United States - G-2016_18 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022506	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-26-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022511	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-28-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022527	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-4-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022528	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022529	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022530	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022713	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022715	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022716	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022717	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-11-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022722	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-12-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025627	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-1 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300025703	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F52-2 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027303	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM2_O1 (SPAdes)	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027915	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)	Environmental	Open in IMG/M
3300027986	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028562	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N1_3	Environmental	Open in IMG/M
3300028740	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_N2_3	Environmental	Open in IMG/M
3300028745	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E1_3	Environmental	Open in IMG/M
3300028788	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E2_2	Environmental	Open in IMG/M
3300029701	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300029951	III_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300029952	II_Bog_N3 coassembly	Environmental	Open in IMG/M
3300029955	II_Bog_E2 coassembly	Environmental	Open in IMG/M
3300029956	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N1_2	Environmental	Open in IMG/M
3300029986	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E2_1	Environmental	Open in IMG/M
3300030519	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E3_3	Environmental	Open in IMG/M
3300030528	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO135-VCO084SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030575	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO747-VDE050SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030582	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO145-ARE022SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030588	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO740-VDE011SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030626	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO410-VDE110SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030739	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N1_3	Environmental	Open in IMG/M
3300030743	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada VCO Co-assembly	Environmental	Open in IMG/M
3300030764	Metatranscriptome of plant litter microbial communities from Maridalen valley, Oslo, Norway - NLI1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030836	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZU4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030917	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FB5 Emin (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030978	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSA4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032072	Soil microbial communities from Bohemian Forest, Czech Republic ? CSI2 metaT (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300032739	Forest Soil Metatranscriptomics Site 2 LB Combined Assembly	Environmental	Open in IMG/M
3300032756	Forest Soil Metatranscriptomics Site 2 Humus Litter Mineral Combined Assembly	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300033983	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB23AN SIP fraction	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.49
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.49
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F053478

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
2222047909	2209111022	Grass Soil	VSEALCTEAALNPTVPLYNAFSPAGGQCDSEQLWGQAHADVIKNGMTPAAAIDRAFKRCNEIFAKITI
JGI12270J11330_101906542	3300000567	Peatlands Soil	PTLPVFNAYSPAWGQANAEQLWGQAHADVIKNGMKPAEAVDKAIKRLNEIFARIAT*
Ga0062389_1044626232	3300004092	Bog Forest Soil	CLKPYIEEGVLNPTLPVYEGYSPAWGQANAEQLWGQAHADVIKNGMKVADAVDKAFKRCNEIFAKVVL*
Ga0070671_1016336991	3300005355	Switchgrass Rhizosphere	CLVPYVTEAVLNPTVPVYEGFSPAWGRVNGEQIWGQCHADVIKNGMKVADAVDKAFKRADQIFGKMI*
Ga0070673_1016658012	3300005364	Switchgrass Rhizosphere	TDMPCLKPYVTEAVLNPTLPVFEGFTPAWGQANAEQLWGQAHADVIKNGMKPADAVDKAFKRCNEIFAKVAM*
Ga0070709_101927871	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	NNEMPCLKPYITEIALNPTVPLYNAFSPAWGQCDAEQLWGQAHADVIKSNMKPADAIDKAFKRCNEIFAKITI*
Ga0070685_108076561	3300005466	Switchgrass Rhizosphere	WLSTDMPCLKPYVTEAVLNPTLPVFEGFTPAWGQANAEQLWGQAHADVIKNAMKPADAVDKAFKRCNEIFAKVAM*
Ga0070684_1016396351	3300005535	Corn Rhizosphere	FWLSTEMPCLVPYVTEAVLNPTLPVFEGYTPAWGQANAEQLWGQAHADVIKNGMKVADAIDKAFKRAEQIFAKVTL*
Ga0068853_1021554461	3300005539	Corn Rhizosphere	AFSPAWGQCDAEQLWGQAHADVIKNGMTPATAIDKAFKRCNEIFARITI*
Ga0070672_1012801342	3300005543	Miscanthus Rhizosphere	TLPVFEGFTPAWGQANAEQLWGQAHADVIKNGMKPADAVDKAFKRCNEIFAKVAM*
Ga0070761_102488882	3300005591	Soil	SGEPCLKPYVEEAVYNPTLPVYEGYSPAWGQANAEQLWGQAHADVIKNGMKVADAVDKAFKRCNEIFAKVVM*
Ga0068856_1002578421	3300005614	Corn Rhizosphere	TEAVLNPTLPVFEGFTPAWGQANAEQLWGQAHADVIKNGMKPADAVDKAFKRCNEIFAKVAM*
Ga0068858_1019788682	3300005842	Switchgrass Rhizosphere	PFWTSTEMPCLLPYITEGVLNPTLPLYNAYSPAWGQLEAEQLWGQAHADVIKGNMKVADAVDKAFKRGNDIFARIVI*
Ga0075029_1006243312	3300006052	Watersheds	YEGYTPAWGQANAEQLWGQAHADVIKNGMKVADAVDKAFKRCNEIFAKVVL*
Ga0075017_1005777721	3300006059	Watersheds	VPLYNGYSPAWGQFEAEQVWGVAHADVIKNNMKVADAIDKALKRCNEVFAKITI*
Ga0075017_1009102791	3300006059	Watersheds	FTPAWGQANAEQLWGQAHADVIKNGMKPADAVDKAFKRCNEIFSKVVM*
Ga0070716_1015136681	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	LKPYITEAVINPTIPVYEGFTPAWGQANAEQLWGQCHADVIKNGMKVADAVDKAFKRCNDIFAKVVM*
Ga0070712_1004700541	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	PFWLQNTDPHVIPYVKEIMGPTIPFYEGYSPAWGQVGSEELWGQAHADVIKNDMKVADAIDKAFKRAEKIFSNYTVG*
Ga0070712_1013872351	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	KPYITEGVLNPTVPLYNGYSPAWGQFEAEQVWGIAHADVIKNNMKASDAIDKALKRCNAIFAKITI*
Ga0068871_1023770371	3300006358	Miscanthus Rhizosphere	EDKWWMGTEMPCLVPYVTEAVLNPTVPVYEGFSPAWGRVNGEQIWGQCHADVIKNGMKVADAVDKAFKRADQIFGKMI*
Ga0079221_113035701	3300006804	Agricultural Soil	MPCLKPYVTEAVLNPTLPVYEGFTPAWGQANAEQLWGQAHADVIKNGMKPADAVDKAFKRANEIFAKMAT*
Ga0068865_1012944802	3300006881	Miscanthus Rhizosphere	KPTMAAWYGYNPAWGAANAEQLWGSANAEVIKGGVRPADAVDKAFKRFEEIFARVSFT*
Ga0073928_102502113	3300006893	Iron-Sulfur Acid Spring	EGFTPAWGQANAEQLWGQAHADVIKNGMKVADAVDKAFKRTEQIFAKMTFG*
Ga0079219_113211082	3300006954	Agricultural Soil	WFSEEMPCLKPYITQIAVNPTVPHYNAFSPAWGQCDAEQLWGQAHADVIKGSMKPADAVDKAFKRCNAIFAKIQI*
Ga0105240_120289282	3300009093	Corn Rhizosphere	PCLKPYVTEAVLNPTLPVFEGFTPAWGQANAEQLWGQAHADVIKNGMKPADAVDKAFKRCNEIFAKVAM*
Ga0116133_12048482	3300009623	Peatland	YEGFTPAWGQANAEQLWGQAHADVIKSGMKVADAVDKAFKRTEQIFAQMTL*
Ga0116106_12464081	3300009645	Peatland	LKPYVEEGVINPTLPVFEGYTPAWGQANAEQLWGQAHADVIKNGMKVADAVDKAFKRTEQIFAQMTL*
Ga0123357_106808632	3300009784	Termite Gut	VKSDSWWLNSGLPPLKPYIEEGVLNPTLPVFEGYSPAWGQANAEQLWGQAHADVIKNGMTPTQAIDKAFKRCNEIFAKVAAI*
Ga0123355_111347692	3300009826	Termite Gut	EGVLNPTLPVFEGYSPAWGQANAEQLWGQAHADVIKNGMTPAQAIDKAFKRCNEIFAKVAAI*
Ga0123355_114505661	3300009826	Termite Gut	EGVLNPTLPVFEGYSPAWGQANAEQLWGQAHADVIKNGMTPTQAIDKAFKRCNEIFAKVAAI*
Ga0123355_114548001	3300009826	Termite Gut	LKPYIEEGVLNPTLPVFEGYSPAWGQANAEQLWGQAHADVIKNGMTPTQAIDKAFKRCNEIFAKVAAI*
Ga0123356_129955941	3300010049	Termite Gut	PYIEEGVLNPTLPVFEGYSPAWGQANAEQLWGQAHADVIKNGMTPTQAIDKAFKRCNEIFAKVAAI*
Ga0123356_131756711	3300010049	Termite Gut	PTLPVFEGYSPAWGQANAEQLWGQAHAYVIKNGMTPAQAIDKAFKRCNEIFSKVAAT*
Ga0126378_122126112	3300010361	Tropical Forest Soil	EGVLNPTLPVWEGYTPAWGQCGAEQLWGQAHADVIKNGMKVADAVDKALKRHKEIFAKMSA*
Ga0134128_121126931	3300010373	Terrestrial Soil	EMPCLKPYVTEAALNPTVPLYNAFSPAWGQCDAEQLWGQAHADVIKNGLTPATAIDKAFKRCNEIFARITI*
Ga0105239_129345841	3300010375	Corn Rhizosphere	WFSDDMPCLKPYITQIAVNPTVPLYNAFSPAWGQCDAEQLWGQCHADVIKGGMKPSDAIDKAFKRCNEIFAKIQI*
Ga0126344_13767022	3300010866	Boreal Forest Soil	PYVTEAVLNPTLPVYEGFTPAWGQANAEQLWGQAHADVIKNNMKVADAVDKAFKRCNEIFAKMVM*
Ga0150983_159144032	3300011120	Forest Soil	SYEGFDPAWSQLSGEKLWGQAHADVIKHGMTPDQAIDKAFKRAEAIFSAVTF*
Ga0150985_1012877802	3300012212	Avena Fatua Rhizosphere	FEGFTPAWGQANAEQLWGQAHADVIKNGMKAADAIDKAFKRINEVFAKFEHA*
Ga0150985_1073525101	3300012212	Avena Fatua Rhizosphere	TPAWGLANAEQLWGQCHADVIKNGMKASEAVDKAFKRAEQIFAKVTL*
Ga0150984_1001388671	3300012469	Avena Fatua Rhizosphere	EGFSPAWGRVNGEQIWGQCHADVIKNGMKVADAVDKAFKRADQIFGKMI*
Ga0150984_1095592142	3300012469	Avena Fatua Rhizosphere	NPTLPVYEGFTPAWGQANAEQLWGQCHADVIKNGLKPADAVDKAFKRCNEIFAKIVM*
Ga0153915_111578382	3300012931	Freshwater Wetlands	FNAYSPAWGQANGEQIWGQAHADVVKNGMKPAEAVDKAIKRLNEIFARMAT*
Ga0164303_110113971	3300012957	Soil	AFSPAWGQCDAEQLWGQAHADVIKSNMKPADAIDKAFKRCNEIFAKITI*
Ga0157378_118153102	3300013297	Miscanthus Rhizosphere	WLNNEMPCLKPYITEIALNPTVPLYNAFSPAWGQCDAEQLWGQAHADVIKNGLTPATAIDKAFKRCNEIFARITI*
Ga0181526_105749212	3300014200	Bog	PYVQEAVLNPTLPVYEGFTPAWGQTSAEQLWGQAHADVIKNGMKVADAVDKAFKRCNEIFAKVVM*
Ga0163163_121782332	3300014325	Switchgrass Rhizosphere	TLPLYNAYSPAWGQLEAEQLWGQAHADVIKGNMKVADAVDKAFKRAEQIFAKVTL*
Ga0182008_101651542	3300014497	Rhizosphere	LKPYVTEAVLNPTLPVYEGFTPAWGQANAEQLWGQAHADVIKNGMKPADAVDKAFKRANEIFAKMAT*
Ga0182024_111546701	3300014501	Permafrost	FWLKSDMPCLTPYVTEGVLNPTVPVYEGFTPAWGQANAEQLWGQAHADVIKGGVKVADAVDKAFKRAEQIFAKMSLG*
Ga0181522_103940401	3300014657	Bog	VYEGYSPAWGQANAEQLWGQAHADVIKNGMKVADAVDKAFKRCNEIFARVVM*
Ga0157377_116508251	3300014745	Miscanthus Rhizosphere	TSTEMPCLLPYITEGVLNPTLPLYNAYSPAWGQLEAEQLWGQAHADVIKGNMKVADAVDKAFKRGNDIFAKITI*
Ga0132258_135636073	3300015371	Arabidopsis Rhizosphere	FNPAWGLCNAEQLWGRAHADVIKGGIKPADAVDKTFKRFEEIFAKVSFT*
Ga0132255_1041538602	3300015374	Arabidopsis Rhizosphere	EGVLDPTLPLYNAYSPAWGQLEAEQLWGQANADVIKGNMKVADAVDKAFKRGNEIFARITI*
Ga0182032_117516842	3300016357	Soil	VHEAVLGPTIPVYEGYSPAWGQLSAEQLWGQAHADVIKNGMTPAAAIDKAFKRAEQIFAKYSVG
Ga0187879_106500752	3300017946	Peatland	DMPCLLPYVTEAVLNPTLPVFEGYTPAWGQANAEQLWGQAHADVIKSGMKVADAVDKAFKRAEQIFAQMTL
Ga0187862_108639402	3300018040	Peatland	PTLPVFEGYSPAWGQANAEQLWGQAHADVIKSGMKVADAVDKAFKRCNEIFAKVVM
Ga0187859_103007532	3300018047	Peatland	DATEPCLKPYVEEGAINPTLPVFEGYTPAWGQANAEQLWGQAHADVIKNGMKVADAVDKAFKRAEQIFAQMTL
Ga0184594_1060222	3300019181	Soil	RIPFYEGYTPAWGQVNSEQLWGTAHADVIKNGMKVSDAVDKAFKRCEQIFARISYD
Ga0181510_14511332	3300019240	Peatland	VLNPTLPVYEGFTPAWGQTSAEQLWGQAHADVIKNGMKPADAIDKAFKRTEQIFAKMTFG
Ga0181504_13882011	3300019258	Peatland	FTPAWGQANAEQLWGQCHADVIKNGMKVADAVDKAFKRCAEIFGKVTM
Ga0182031_13665352	3300019787	Bog	MRVHPSLGQANAEQLWGQAHADVIKNGMKPADAVDKAFKRCNEIFSKVIM
Ga0210388_116965872	3300021181	Soil	EGVLNPTLPVYEGYSPAWGQANAEQLWGQAHADVIKNGMKVADAVDKAFKRCNEIFAKVV
Ga0210393_112788092	3300021401	Soil	LKPYIEEGVLNPTLPVYEGYSPAWGQANAEQLWGQAHADVVKNGMKVAEAVDKAFKRCSEIFAKVTM
Ga0210397_109391161	3300021403	Soil	LNPTLPVYEGYSPACGQANAEQLWGQAHAGVVKNGMKVADAVDKAFKRCSEIFAKVTM
Ga0210389_112172151	3300021404	Soil	VLNPTLPVWEGYSPAWGQANAEQLWGQAHADVIKNGMKVADAVDKAFKRCNEIFAKVVM
Ga0210383_113061832	3300021407	Soil	LPVYEGFTPAWGQVSAEQLWGQAHADVIKNGMKVADAIDKAFKRADQIFARIAG
Ga0210410_108356801	3300021479	Soil	TLPVFEGFTPAWGQANAEQLWGQAHADVIKSGMKPADAVDKAFKRCAEIFAKVVM
Ga0213854_12733122	3300021855	Watersheds	TDMPCLKPYVTEAVLNPTVPVYEGFTPAWGQANAEQLWGQAHADVIKNGMKPADAVDKAFKRAEQVFAKFTFG
Ga0242648_10355672	3300022506	Soil	YEGFTPAWGQANAEQLWGQAHADVIKSGMKVADAVDKAFKRAEQIFAQMTL
Ga0242651_10460681	3300022511	Soil	PTLPVFEGYSPAWGQANAEQLWGQAHADVIKSGMKVSDAVDKAFKRANQIFATMVM
Ga0242664_11367182	3300022527	Soil	YIEEGVLNPTLPVYEGYSPAWGQANAEQLWGQAHADVVKNGMKVAEAVDKAFTRCSEIFAKVTM
Ga0242664_11469572	3300022527	Soil	KPYVTEAVLNPTLPVYEGFTPAWGQANAEQLWGQAHADVIKNGMKVSDAVDKAFKRCEQIFARISYD
Ga0242664_11510012	3300022527	Soil	CLKPYIEEGVLNPTLPVWEGYSPAWGQANAEQLWGQAHADVIKNGMKVADAVDKAFKRCNEIFAKVVM
Ga0242669_10659112	3300022528	Soil	WLNSGEPCLKPYVEELVYNPTLPVYEGFTPAWGQVSAEQLWGQAHADVIKNGMKVADAIDKAFKRADQIFARIAG
Ga0242668_10378111	3300022529	Soil	PCLLPYVQEAVVNPTLPVFEGYSPAWGQANAEQLWGQAHADVIKSGMKVSDAVDKAFKRANQIFATMVM
Ga0242658_10213772	3300022530	Soil	LNPTLPVYEGFSPAWGQANAEQLWGQAHADVIKNGMKAPEAIDKAFKRLNQVFTKFTT
Ga0242658_11356762	3300022530	Soil	PCLKPYVTEAVLNPTLPVYEGFTPAWGQANAEQLWGQAHADVIKNGMKVSDAVDKAFKRCEQIFARISYD
Ga0242677_10548181	3300022713	Soil	YVEEVVYNPTLPVYEGFTPAWGQVSAEQLWGQAHADVIKNGMKVADAIDKAFKRADQIFARIAG
Ga0242678_10667002	3300022715	Soil	EGFTPAWGQANAEQLWGQAHADVIKNGMKPADAVDKAFKRAEQVFAKFTFG
Ga0242673_10354451	3300022716	Soil	PYVTEAVLNPTLPVFEGYSPAWGQASAEQLWGQAHADVIKNGMKVADAVDKAFKRCNEVFSKVVM
Ga0242673_10653291	3300022716	Soil	EAVYNPTLPVYEGYSPAWGQANAEQLWGQVHADVIKNGMKVADAVDKAFKRCNEIFAKVV
Ga0242661_10674081	3300022717	Soil	KDDPWWANSGEPCLQPYVQEVVYNATIPVYEGFTPAWGQVSAEQLWGQAHADVIKNGMKVADAIDKAFKRADQIFARIAG
Ga0242657_10553722	3300022722	Soil	PTLPVFEGYSPAWGQANAEQLWGQAHADVIKNGMKVADAVDKAFKRCNEIFAKVIM
Ga0242657_11047702	3300022722	Soil	YVQEAVLNPTLPVFEGYSPAWGQANAEQLWGQAHADVIKNGMKPADAVDKAFKRADQVFAKFTFG
Ga0242657_12238851	3300022722	Soil	YVEEGAINPTVPVYEGFTPAWGQANAEQLWGQAHADVIKSGMKVADAVDKAFKRAEQIFAQMTL
Ga0208220_11557062	3300025627	Arctic Peat Soil	VTEGVLNPTLPVYEGFTPAWGQANAEQLWGIAHADVIKNGMKVSDAVDKAFKRCNEIFSKVVM
Ga0208357_10309023	3300025703	Arctic Peat Soil	PTIPVYEGFTPAWGQANAEQLWGQAHADVIKNGMKPSDAIDKAFKRANQIFATMVM
Ga0207695_106369251	3300025913	Corn Rhizosphere	TRRCRSMKASPAWGQANAEQLWGQAHADVIKNNMKAADAVDKALKRFKQIFAKMEV
Ga0207693_111652321	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	PFWLQNTDPHVIPYVKEIMGPTIPFYEGYSPAWGQVGSEELWGQAHADVIKNDMKVADAIDKAFKRAEKIFSNYTVG
Ga0207663_108950132	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	AAWYGFNPAWGLSNAEQLWGRAHADVIKSGAKPADAVDAAFRRFEEIFAKVSFS
Ga0207652_105409572	3300025921	Corn Rhizosphere	LPVYEGFTPAWGQCNAEQLWGQCHADVIKNNVKVADAVDKAFKRCNEIFAKVVM
Ga0207691_103330832	3300025940	Miscanthus Rhizosphere	NPTLPVFEGFTPAWGQANAEQLWGQAHADVIKNGMKPADAVDKAFKRCNEIFAKVAM
Ga0207667_106147252	3300025949	Corn Rhizosphere	MPCLKPYVTEAVLNPTLPVFEGFTPAWGQANAEQLWGQAHADVIKNGMKPADAVDKAFKRCNEIFAKVAM
Ga0208999_10311731	3300027303	Forest Soil	PTIPVYEGFTPAWGQTNAEQLWGQCHADVIKNGMKPADAVAKAFKRAEQVFAKITY
Ga0209579_104468031	3300027869	Surface Soil	EGAINPTVPVYEGFTPAWGQANAEQLWGQAHADVIKGNMKVADAVDKAFKRADQVFAKFTFG
Ga0209380_106089242	3300027889	Soil	IPAYNAYNPAWGEVSAEQLWGVAHADVIKQGMTPTAAVDKAFKRAEDIFTKFTFG
Ga0209069_107497752	3300027915	Watersheds	VYEGFTPAWGQANAEQLWGQAHADVIKNGMKPADAVDKAFKRAEQVFAKFTFG
Ga0209168_100244605	3300027986	Surface Soil	LKPYVTEAVLNPTLPVFEGYTPAWGQANAEQLWGQCHADVIKNGMKVADAVDKAFKRCSEIFAKMVM
Ga0209168_100739893	3300027986	Surface Soil	YIEEGVLNPTLPTYEGYSPAWGQANAEQLWGQAHADVIKNGMKVADAVDKAFKRCGEIFAKVTM
Ga0302151_101815231	3300028562	Bog	TLPVYEGFTPAWGQANAEQLWGQAHADVIKNGMKVADAVDKAFKRTEQIFAKMTFG
Ga0302294_100247071	3300028740	Fen	YEGFTPAWGQANAEQLWGQCHADVIKNGMKASDAVDKAFKRCDQVFAKIQF
Ga0302267_100511254	3300028745	Bog	AFWLKSDMPCLLPYVTEAVLNPTLPVYEGFTPAWGQANAEQLWGQAHADVIKNGMKVADAVDKAFKRTEQIFAKMTFG
Ga0302189_103931691	3300028788	Bog	CLKPYVEEAVLNPTLPVYEGFTPAWGQANAEQLWGQAHADVIKNGMKPADAIDKAFKRCNEIFARVET
Ga0222748_10561382	3300029701	Soil	KPYIEEGVLNPTLPVYEGYTPAWGQANAEQLWGQAHADVIKNGMKVADAVDKAFKRCNEIFAKVIM
Ga0311371_121875451	3300029951	Palsa	NPTLPVYEGFTPAWGQANAEQLWGQAHADVIKNGMKVADAIDKAFKRADQIFARIAG
Ga0311346_114499911	3300029952	Bog	RPPYVREAVLEPTTAVFEGFTPAWGQVSAEQLWGQAHADVIKNGMTPSAAIDKAFKRAEQIFAKMTYG
Ga0311342_111197502	3300029955	Bog	EGFTPAWGQVQAEQIWGQAHADVVKDGMKVADAVDKAFKRAEQIFARVTYD
Ga0302150_101106821	3300029956	Bog	LEPTTAVFEGFTPAWGQVSAEQLWGQAHADVIKNGMTPSAAIDKAFKRAEQIFAKMTYG
Ga0302188_104856582	3300029986	Bog	LPVYEGFTPAWGQANAEQLWGQAHADVIKNGMKVADAVDKAFKRTEQIFAKMTFG
Ga0302193_105345872	3300030519	Bog	REAVLEPTTAVFEGFTPAWGQVSAEQLWGQAHADVIKNGMTPSAAIDKAFKRAEQIFAKMTYG
Ga0210277_106254342	3300030528	Soil	YVEEGSINPTVPVYEGFTPAWGQANAEQLWGQAHADVIKSGMKVADAVDKAFKRAEQIFAQMTL
Ga0210277_110394812	3300030528	Soil	VKDDPWWANSGEPCLQPYVQEVVYNATLPVYEGFTPAWGQVSAEQLWGQAHADVIKNGMKVSDAIDKAFKRANEIFARISG
Ga0210288_12703772	3300030575	Soil	FTPAWGQVSAEQLWGQAHADVIKNGMKVADAIDKAFKRADQIFARIAG
Ga0210261_11555481	3300030582	Soil	RGYSPAWGQANAEQLWGQAHADVIKNGMKVADAVDKAFKRADQIFARIAG
Ga0210283_11738722	3300030588	Soil	FTPAWGQVSAEQLWGQAHADVIKNGMKVSDAIDKAFKRANEIFARISG
Ga0210291_115992562	3300030626	Soil	VQEVVYNATLPVYEGFTPAWGQVSAEQLWGQAHADVIKNGMKVADAVDKAFKRCNEIFAKVVM
Ga0302311_110483461	3300030739	Palsa	PVYEGFTPAWGQANAEQLWGQAHADVIKNGMKVADAIDKAFKRADQIFARIAG
Ga0265461_101864821	3300030743	Soil	PCLKPYIEEGVLNPTLPVYEGYTPAWGQANAEQLWGQAHADVIKNGMKVADAVDKAFKRCNEIFARVVM
Ga0265720_10131541	3300030764	Soil	IEEGVLNPTLPVYEGYTPAWGQANAEQLWGQAHADVIKNGMKVADAVDKAFKRCNEIFARVVM
Ga0265767_1008751	3300030836	Soil	SDAEEPCLKPYVEEGSINPTLPVFEGYTPAWGQANAEQLWGQAHADVIKNGMKVADAVDKAFKRCEQIFARISYD
Ga0075382_117918131	3300030917	Soil	PFWLSKEMPCLVPYVTEAVLNPTLPVYEGYSPAWGQANAEQLWGQAHADVIKNNMKVADAVDKAFKRCNEIFAKMVM
Ga0265757_1021652	3300030978	Soil	KSDPFWLQSDATEPCLRPYVEEGSINPTVPVYEGFTPAWGQANAEQLWGQAHADVIKSGMKVADAVDKAFKRAEQIFAQMTL
Ga0265757_1097762	3300030978	Soil	LKPYVTEAVLNPTLPVYEGFTPAWGQANAEQLWGQAHADVIKNGMKVSDAVDKAFKRCEQIFARISYD
Ga0302325_111323192	3300031234	Palsa	LKPYVEEVVYNPTLPVYEGFTPAWGQVSAEQLWGQAHADVIKGGVKVADAIDKAFKRADQIFARIGRQP
Ga0170820_124566361	3300031446	Forest Soil	LNPTLPVYEGYTPAWGQANAEQLWGQAHADVIKNGMKVADAVDKAFKRCSEIFAKVTM
Ga0318565_106433752	3300031799	Soil	VKDDPWWFSDDMPCLKPYITEIALNPTVPLYNAFSPAWGQCDAEQLWGQAHADVIKNGMKPADAVDKAFKRCTEIFAKITI
Ga0306925_110571072	3300031890	Soil	PHLAPYVHEAVLGPTIPVYEGYSPAWGQLSAEQLWGQAHADVIKNGMTPAAAIDKAFKRAEQIFAKYSVG
Ga0306926_108980022	3300031954	Soil	KSPDPHLAPYVHEAVLGPTIPVYEGYSPAWGQLSAEQLWGQAHADVIKNGMTPAAAIDKAFKRAEQIFAKYSVG
Ga0308176_126136432	3300031996	Soil	AWYGFNPAWGLSNAEQLWGRAHADVIKSGAKPADAVDAAFRRFEEIFARVSFS
Ga0326631_1104171	3300032072	Soil	TEAVLNPTLPVYEGFTPAWGQANAEQLWGQAHADVIKNGMKVSDAVDKAFKRCEQIFARISYD
Ga0348332_123334412	3300032515	Plant Litter	LKPYIEEGVLNPTLPVYEGYTPAWGQANAEQLWGQAHADVIKNGMKVADAVDKAFKRCNEIFARVVM
Ga0348332_131415711	3300032515	Plant Litter	NPTLPVYEGFSPAWGQANAEQLWGQAHADVIKNNVKVADAVDKAFKRCNEIFAKVVM
Ga0315741_111445171	3300032739	Forest Soil	PVFEGYSPAWGQANAEQLWGQAHADVIKNGMKVADAVDKAFKRCNEIFAKVIM
Ga0315742_104624112	3300032756	Forest Soil	LKPYVTEAVLNPTLPVYEGFTPAWGQANAEQLWGQAHADVIKNGMKVSEAVDKAFKRCNEIFAKMVL
Ga0315742_135355102	3300032756	Forest Soil	VLNPTLPVFEGYSPAWGQANAEQLWGQAHADVIKNDMKVADAVDKAFKRANQIFATMVM
Ga0335072_114348252	3300032898	Soil	PCLKPYVTEAVLNPTVPLYNAFSPAWGQCDSEQLWGQAHADVIKNGITPAAAVDKAFKRCSEIFAKITI
Ga0335072_115523441	3300032898	Soil	INPTLPVFEGYSPAWGQAAAEQLWGQAHADVIKNGMKSTDAVDKAFKRLNEIFAKVVM
Ga0335083_111492301	3300032954	Soil	LNPTLPVWEGYTPAWGQANAEQLWGQAHADVIKNGMKVSDAVDKAFKRCSEIFTKVTI
Ga0335076_117655712	3300032955	Soil	YLEEGVFNPTLPIFEGYSPAWGQANSEQLWGQAHADVIKNNMKVADAVDKAFKRCSEIFARVTM
Ga0335073_115298502	3300033134	Soil	LNPTLPVWEGYTPAWGQANSEQLWGQAIAAVVKSGAKPADAIDKAFHRCNEIFAKMAA
Ga0371488_0496722_365_544	3300033983	Peat Soil	VLNPTLPVYEGFTPAWGQANAEQLWGQAHADVIKNGMKPADAIDKAFKRCNEIFARVET

Hidden Markov Model


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