Metagenome / Metatranscriptome Family F053477

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F053477
Family Type	Metagenome / Metatranscriptome
Number of Sequences	141
Average Sequence Length	48 residues
Representative Sequence	MNRFSGALSSDAIGDLLREFAPDMKRLFRKHAPKKILKIEEKLPIPAEDKP
Number of Associated Samples	115
Number of Associated Scaffolds	141

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	24.11 %
% of genes near scaffold ends (potentially truncated)	71.63 %
% of genes from short scaffolds (< 2000 bps)	80.14 %
Associated GOLD sequencing projects	106
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.26

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (97.163 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (20.567 % of family members)
Environment Ontology (ENVO)	Unclassified (24.113 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (45.390 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 46.84% β-sheet: 0.00% Coil/Unstructured: 53.16%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.26
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.26
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 141 Family Scaffolds
PF07228	SpoIIE	15.60
PF14833	NAD_binding_11	8.51
PF01040	UbiA	7.80
PF00873	ACR_tran	7.09
PF00561	Abhydrolase_1	4.96
PF12697	Abhydrolase_6	3.55
PF02627	CMD	2.84
PF08281	Sigma70_r4_2	2.84
PF07849	DUF1641	2.84
PF00210	Ferritin	2.84
PF04542	Sigma70_r2	2.13
PF11453	DUF2950	1.42
PF06463	Mob_synth_C	1.42
PF07732	Cu-oxidase_3	1.42
PF01370	Epimerase	1.42
PF00248	Aldo_ket_red	1.42
PF13493	DUF4118	1.42
PF02371	Transposase_20	0.71
PF00115	COX1	0.71
PF00589	Phage_integrase	0.71
PF02321	OEP	0.71
PF09994	DUF2235	0.71
PF00069	Pkinase	0.71
PF08240	ADH_N	0.71
PF13365	Trypsin_2	0.71

COG ID	Name	Functional Category	% Frequency in 141 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	2.84
COG0599	Uncharacterized conserved protein YurZ, alkylhydroperoxidase/carboxymuconolactone decarboxylase family	General function prediction only [R]	2.84
COG2128	Alkylhydroperoxidase family enzyme, contains CxxC motif	Inorganic ion transport and metabolism [P]	2.84
COG2427	Uncharacterized conserved protein YjgD, DUF1641 family	Function unknown [S]	2.84
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	2.13
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	2.13
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	2.13
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	2.13
COG1538	Outer membrane protein TolC	Cell wall/membrane/envelope biogenesis [M]	1.42
COG2132	Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and spore coat protein CotA)	Cell cycle control, cell division, chromosome partitioning [D]	1.42
COG2896	GTP 3',8-cyclase (molybdenum cofactor biosynthesis protein MoaA)	Coenzyme transport and metabolism [H]	1.42
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.71

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	97.16 %
Unclassified	root	N/A	2.84 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	97.16 %
Unclassified	root	N/A	2.84 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	97.16 %
Unclassified	root	N/A	2.84 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	52.48 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.84 %
Unclassified	root	N/A	2.84 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	2.13 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.71 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.71 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.71 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	39.72 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	9.22 %
Unclassified	root	N/A	2.84 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.42 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1.42 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.71 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.71 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.71 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.71 %
Deinococcus-Thermus	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus	0.71 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	39.72 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	8.51 %
Unclassified	root	N/A	2.84 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	1.42 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.42 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.71 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.71 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.71 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.71 %
Deinococci	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci	0.71 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.71 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	39.72 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	8.51 %
Unclassified	root	N/A	2.84 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.42 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	1.42 %
Planctomycetales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales	0.71 %
Chitinophagia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia	0.71 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	0.71 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	0.71 %
Deinococci	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci	0.71 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.71 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	39.72 %
Unclassified	root	N/A	2.84 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.42 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	1.42 %
Chitinophagales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales	0.71 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.71 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	0.71 %
Candidatus Solibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	0.71 %
Planctomycetaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae	0.71 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	0.71 %
Deinococci	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci	0.71 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.71 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	39.72 %
Unclassified	root	N/A	2.84 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.42 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	1.42 %
Acidobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	0.71 %
Schlesneria	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → Schlesneria	0.71 %
Chitinophagaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	0.71 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	0.71 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.71 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	0.71 %
Deinococci	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci	0.71 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.71 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	39.72 %
Unclassified	root	N/A	2.84 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.42 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	1.42 %
Schlesneria paludicola	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → Schlesneria → Schlesneria paludicola	0.71 %
Acidobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	0.71 %
Chitinophagaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	0.71 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	0.71 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.71 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	0.71 %
Deinococci	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci	0.71 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.71 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000789\|JGI1027J11758_11614802	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	632	Open in IMG/M
3300002245\|JGIcombinedJ26739_100012486	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6994	Open in IMG/M
3300002245\|JGIcombinedJ26739_100049928	All Organisms → cellular organisms → Bacteria	3805	Open in IMG/M
3300002908\|JGI25382J43887_10074900	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	1826	Open in IMG/M
3300004091\|Ga0062387_101388870	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	559	Open in IMG/M
3300004803\|Ga0058862_12875615	All Organisms → cellular organisms → Bacteria	1267	Open in IMG/M
3300005167\|Ga0066672_10151669	Not Available	1454	Open in IMG/M
3300005179\|Ga0066684_10087069	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci	1885	Open in IMG/M
3300005180\|Ga0066685_10298332	All Organisms → cellular organisms → Bacteria	1115	Open in IMG/M
3300005435\|Ga0070714_101088843	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	779	Open in IMG/M
3300005439\|Ga0070711_100142564	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1798	Open in IMG/M
3300005445\|Ga0070708_100024036	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5189	Open in IMG/M
3300005445\|Ga0070708_101542054	All Organisms → cellular organisms → Bacteria	619	Open in IMG/M
3300005471\|Ga0070698_101762363	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	572	Open in IMG/M
3300005526\|Ga0073909_10618114	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	536	Open in IMG/M
3300005538\|Ga0070731_10715429	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	665	Open in IMG/M
3300005560\|Ga0066670_10691450	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	618	Open in IMG/M
3300005568\|Ga0066703_10137566	Not Available	1461	Open in IMG/M
3300005586\|Ga0066691_10330578	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	901	Open in IMG/M
3300005921\|Ga0070766_10553121	All Organisms → cellular organisms → Bacteria	769	Open in IMG/M
3300005952\|Ga0080026_10278107	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	509	Open in IMG/M
3300006162\|Ga0075030_100373130	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1137	Open in IMG/M
3300006173\|Ga0070716_101601962	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	535	Open in IMG/M
3300006175\|Ga0070712_100088506	All Organisms → cellular organisms → Bacteria	2263	Open in IMG/M
3300006893\|Ga0073928_10111803	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	2269	Open in IMG/M
3300009088\|Ga0099830_10412544	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	1093	Open in IMG/M
3300009090\|Ga0099827_11554040	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	576	Open in IMG/M
3300009090\|Ga0099827_11798085	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	534	Open in IMG/M
3300009137\|Ga0066709_104033521	All Organisms → cellular organisms → Bacteria	534	Open in IMG/M
3300009174\|Ga0105241_10588207	All Organisms → cellular organisms → Bacteria	1004	Open in IMG/M
3300009623\|Ga0116133_1058628	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	957	Open in IMG/M
3300009665\|Ga0116135_1215695	All Organisms → cellular organisms → Bacteria	737	Open in IMG/M
3300010304\|Ga0134088_10179899	All Organisms → cellular organisms → Bacteria	1011	Open in IMG/M
3300010304\|Ga0134088_10603888	All Organisms → cellular organisms → Bacteria	546	Open in IMG/M
3300010335\|Ga0134063_10189475	All Organisms → cellular organisms → Bacteria	965	Open in IMG/M
3300010361\|Ga0126378_10066021	All Organisms → cellular organisms → Bacteria → Proteobacteria	3443	Open in IMG/M
3300010376\|Ga0126381_100356575	All Organisms → cellular organisms → Bacteria	2023	Open in IMG/M
3300011270\|Ga0137391_10583091	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	939	Open in IMG/M
3300012200\|Ga0137382_10275009	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1171	Open in IMG/M
3300012202\|Ga0137363_10290918	Not Available	1339	Open in IMG/M
3300012202\|Ga0137363_11059439	All Organisms → cellular organisms → Bacteria	689	Open in IMG/M
3300012202\|Ga0137363_11529320	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	559	Open in IMG/M
3300012205\|Ga0137362_11712345	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	515	Open in IMG/M
3300012206\|Ga0137380_10045029	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4057	Open in IMG/M
3300012211\|Ga0137377_11150692	All Organisms → cellular organisms → Bacteria	706	Open in IMG/M
3300012362\|Ga0137361_11290158	All Organisms → cellular organisms → Bacteria → Acidobacteria	654	Open in IMG/M
3300012362\|Ga0137361_11822771	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	526	Open in IMG/M
3300012362\|Ga0137361_11899260	All Organisms → cellular organisms → Bacteria	512	Open in IMG/M
3300012363\|Ga0137390_10041219	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4452	Open in IMG/M
3300012363\|Ga0137390_10388766	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1374	Open in IMG/M
3300012685\|Ga0137397_11212200	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	543	Open in IMG/M
3300012917\|Ga0137395_10057774	All Organisms → cellular organisms → Bacteria → Acidobacteria	2464	Open in IMG/M
3300012918\|Ga0137396_10370951	All Organisms → cellular organisms → Bacteria	1060	Open in IMG/M
3300012918\|Ga0137396_10999653	All Organisms → cellular organisms → Bacteria	606	Open in IMG/M
3300012924\|Ga0137413_10381122	All Organisms → cellular organisms → Bacteria	1009	Open in IMG/M
3300012929\|Ga0137404_11531298	All Organisms → cellular organisms → Bacteria	617	Open in IMG/M
3300012930\|Ga0137407_11892482	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	569	Open in IMG/M
3300012944\|Ga0137410_11762476	All Organisms → cellular organisms → Bacteria	546	Open in IMG/M
3300014154\|Ga0134075_10319783	All Organisms → cellular organisms → Bacteria	677	Open in IMG/M
3300014169\|Ga0181531_10908704	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	551	Open in IMG/M
3300014201\|Ga0181537_10964737	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	577	Open in IMG/M
3300014489\|Ga0182018_10003746	All Organisms → cellular organisms → Bacteria	13338	Open in IMG/M
3300014489\|Ga0182018_10418312	All Organisms → cellular organisms → Bacteria	715	Open in IMG/M
3300014489\|Ga0182018_10455467	All Organisms → cellular organisms → Bacteria	680	Open in IMG/M
3300014491\|Ga0182014_10013172	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	7793	Open in IMG/M
3300014495\|Ga0182015_10072255	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2444	Open in IMG/M
3300014495\|Ga0182015_10079425	All Organisms → cellular organisms → Bacteria	2309	Open in IMG/M
3300014501\|Ga0182024_10242840	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2422	Open in IMG/M
3300015242\|Ga0137412_10136620	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	1982	Open in IMG/M
3300015245\|Ga0137409_10438979	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1124	Open in IMG/M
3300017926\|Ga0187807_1223260	All Organisms → cellular organisms → Bacteria	613	Open in IMG/M
3300017930\|Ga0187825_10377334	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	541	Open in IMG/M
3300017946\|Ga0187879_10074569	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1966	Open in IMG/M
3300017946\|Ga0187879_10560187	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	634	Open in IMG/M
3300018003\|Ga0187876_1237528	All Organisms → cellular organisms → Bacteria	598	Open in IMG/M
3300018007\|Ga0187805_10010476	All Organisms → cellular organisms → Bacteria	3887	Open in IMG/M
3300018019\|Ga0187874_10217990	All Organisms → cellular organisms → Bacteria	789	Open in IMG/M
3300018030\|Ga0187869_10013819	All Organisms → cellular organisms → Bacteria	4807	Open in IMG/M
3300018034\|Ga0187863_10100632	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1620	Open in IMG/M
3300018040\|Ga0187862_10848537	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	526	Open in IMG/M
3300018468\|Ga0066662_12126123	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	588	Open in IMG/M
3300019786\|Ga0182025_1198017	All Organisms → cellular organisms → Bacteria	3032	Open in IMG/M
3300020021\|Ga0193726_1021422	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3280	Open in IMG/M
3300020170\|Ga0179594_10173971	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	802	Open in IMG/M
3300020579\|Ga0210407_10524286	All Organisms → cellular organisms → Bacteria	925	Open in IMG/M
3300020579\|Ga0210407_10596740	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	861	Open in IMG/M
3300020581\|Ga0210399_10042660	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3635	Open in IMG/M
3300021088\|Ga0210404_10173723	All Organisms → cellular organisms → Bacteria	1142	Open in IMG/M
3300021168\|Ga0210406_10130724	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2117	Open in IMG/M
3300021171\|Ga0210405_10101953	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2265	Open in IMG/M
3300021171\|Ga0210405_10242984	All Organisms → cellular organisms → Bacteria	1425	Open in IMG/M
3300021171\|Ga0210405_11095927	All Organisms → cellular organisms → Bacteria	595	Open in IMG/M
3300021178\|Ga0210408_10238448	All Organisms → cellular organisms → Bacteria	1448	Open in IMG/M
3300021403\|Ga0210397_11344485	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	555	Open in IMG/M
3300021432\|Ga0210384_10606816	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	983	Open in IMG/M
3300021432\|Ga0210384_11135650	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → Schlesneria → Schlesneria paludicola	685	Open in IMG/M
3300021479\|Ga0210410_10161588	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1999	Open in IMG/M
3300021559\|Ga0210409_10000917	All Organisms → cellular organisms → Bacteria	41732	Open in IMG/M
3300021559\|Ga0210409_11533419	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	542	Open in IMG/M
3300022531\|Ga0242660_1211951	All Organisms → cellular organisms → Bacteria → Acidobacteria	537	Open in IMG/M
3300025414\|Ga0208935_1048441	All Organisms → cellular organisms → Bacteria	568	Open in IMG/M
3300025612\|Ga0208691_1007744	All Organisms → cellular organisms → Bacteria	2870	Open in IMG/M
3300025612\|Ga0208691_1057825	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	877	Open in IMG/M
3300025910\|Ga0207684_10005155	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	12165	Open in IMG/M
3300025910\|Ga0207684_10021012	All Organisms → cellular organisms → Bacteria	5574	Open in IMG/M
3300025910\|Ga0207684_10258823	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1501	Open in IMG/M
3300025910\|Ga0207684_11328879	All Organisms → cellular organisms → Bacteria	591	Open in IMG/M
3300025911\|Ga0207654_10677143	All Organisms → cellular organisms → Bacteria	740	Open in IMG/M
3300025939\|Ga0207665_11669287	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	505	Open in IMG/M
3300026325\|Ga0209152_10197827	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	755	Open in IMG/M
3300026325\|Ga0209152_10207232	All Organisms → cellular organisms → Bacteria	736	Open in IMG/M
3300026469\|Ga0257169_1028127	All Organisms → cellular organisms → Bacteria	829	Open in IMG/M
3300026496\|Ga0257157_1074006	All Organisms → cellular organisms → Bacteria	585	Open in IMG/M
3300026529\|Ga0209806_1321323	All Organisms → cellular organisms → Bacteria	519	Open in IMG/M
3300027326\|Ga0209731_1004378	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1713	Open in IMG/M
3300027545\|Ga0209008_1139037	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	536	Open in IMG/M
3300027651\|Ga0209217_1032086	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1640	Open in IMG/M
3300027660\|Ga0209736_1097890	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	799	Open in IMG/M
3300027663\|Ga0208990_1124004	All Organisms → cellular organisms → Bacteria	699	Open in IMG/M
3300027745\|Ga0209908_10076036	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	792	Open in IMG/M
3300027846\|Ga0209180_10115924	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1534	Open in IMG/M
3300027869\|Ga0209579_10178787	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1134	Open in IMG/M
3300027882\|Ga0209590_10437707	All Organisms → cellular organisms → Bacteria	845	Open in IMG/M
3300027884\|Ga0209275_10169871	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1165	Open in IMG/M
3300027898\|Ga0209067_10027306	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2916	Open in IMG/M
3300028906\|Ga0308309_10672015	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	900	Open in IMG/M
3300028906\|Ga0308309_10832260	All Organisms → cellular organisms → Bacteria	802	Open in IMG/M
3300028906\|Ga0308309_11569480	All Organisms → cellular organisms → Bacteria → Acidobacteria	561	Open in IMG/M
3300030878\|Ga0265770_1057776	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	716	Open in IMG/M
3300031128\|Ga0170823_11145588	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	722	Open in IMG/M
3300031241\|Ga0265325_10064799	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1847	Open in IMG/M
3300031249\|Ga0265339_10085368	All Organisms → cellular organisms → Bacteria	1662	Open in IMG/M
3300031708\|Ga0310686_108019553	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	687	Open in IMG/M
3300031715\|Ga0307476_10940446	All Organisms → cellular organisms → Bacteria → Acidobacteria	637	Open in IMG/M
3300031718\|Ga0307474_10546955	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	910	Open in IMG/M
3300031753\|Ga0307477_10244822	All Organisms → cellular organisms → Bacteria	1243	Open in IMG/M
3300031823\|Ga0307478_10042372	All Organisms → cellular organisms → Bacteria	3343	Open in IMG/M
3300031962\|Ga0307479_11729611	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	578	Open in IMG/M
3300032180\|Ga0307471_102942168	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	604	Open in IMG/M
3300032205\|Ga0307472_100159432	Not Available	1661	Open in IMG/M
3300034163\|Ga0370515_0296539	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	684	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.45%
Host-Associated	Host-Associated	3.55%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	81.56%
Aquatic	Environmental → Aquatic	14.89%
Plants	Host-Associated → Plants	2.84%
Human	Host-Associated → Human	0.71%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	81.56%
Freshwater	Environmental → Aquatic → Freshwater	12.77%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.84%
Sediment	Environmental → Aquatic → Sediment	1.42%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.71%
Digestive System	Host-Associated → Human → Digestive System	0.71%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	56.74%
Loam	Environmental → Terrestrial → Soil → Loam	17.02%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	12.77%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	7.80%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.42%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.42%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.42%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.71%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	0.71%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	29.08%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	18.44%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	9.22%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.51%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.51%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	7.09%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	7.09%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	3.55%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.13%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.42%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.42%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.42%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.71%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.71%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	0.71%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	20.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	12.77%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	7.09%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	4.96%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.96%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.96%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	3.55%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	3.55%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.55%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.84%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.13%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.13%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.13%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.13%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.42%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.42%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.42%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	1.42%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.42%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	1.42%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.71%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.71%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.71%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.71%
Thawing Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Thawing Permafrost	0.71%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	0.71%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.71%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.71%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	0.71%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004803	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-2 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300005952	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-045	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009623	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_10	Environmental	Open in IMG/M
3300009665	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300014169	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG	Environmental	Open in IMG/M
3300014201	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaG	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300014491	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2D metaG	Environmental	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300017926	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_2	Environmental	Open in IMG/M
3300017930	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_5	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300018003	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_40	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300018019	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_150	Environmental	Open in IMG/M
3300018030	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_100	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300018040	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_150	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300019786	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (PacBio error correction)	Environmental	Open in IMG/M
3300020021	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c1	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022531	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-28-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025414	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_10 (SPAdes)	Environmental	Open in IMG/M
3300025612	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10 (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300026469	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-17-B	Environmental	Open in IMG/M
3300026496	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-69-A	Environmental	Open in IMG/M
3300026529	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152 (SPAdes)	Environmental	Open in IMG/M
3300027326	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_RefH0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027545	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O3 (SPAdes)	Environmental	Open in IMG/M
3300027651	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027660	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027663	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027745	Thawing permafrost microbial communities from the Arctic, studying carbon transformations - Permafrost 812P2M	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300030878	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031241	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG	Host-Associated	Open in IMG/M
3300031249	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG	Host-Associated	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300034163	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_04D_14	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI1027J11758_116148022	3300000789	Soil	MNRFSGALSSDTIGDLLREFTPDMKRLFHKHAPKKILKIEKKL
JGIcombinedJ26739_1000124866	3300002245	Forest Soil	MNRFGGVLSSDAIGDLLREFTPDMKRLFRKHALKKILKIEEKLPIPADDKP*
JGIcombinedJ26739_1000499285	3300002245	Forest Soil	GALSSDAIGDLLLEFAPDIKRLFRKHAPKTILKIEEKLPIPPEDKP*
JGI25382J43887_100749003	3300002908	Grasslands Soil	ITDLLREFTPDMKRLFRRHAPKKIRRIEEKLPIPPEDKP*
Ga0062387_1013888702	3300004091	Bog Forest Soil	MNRFAGALSSDAIGDLQHEFMPDIKRLFRKHAPKEILKIEEKLPIPAEDKP*
Ga0058862_128756151	3300004803	Host-Associated	MSRFIGAIGSDATSNVLREFWPDIKRIFRKHAPEKIKEIEEKLPSHL*
Ga0066672_101516692	3300005167	Soil	SSDAIGDLLREFAPDMKRLFRKHAPKKILKIEEKLPIPAEDKP*
Ga0066684_100870693	3300005179	Soil	MNRFSGALSSDAIGDLLREFAPDMKRLFRKHAPKKILKIEEKLPIPAEDKP*
Ga0066685_102983322	3300005180	Soil	MNRFAAGLSSDAITDLLAEFAPDMKRLFRRHAPKEIRKIEEKLPIPPEDKP*
Ga0070714_1010888431	3300005435	Agricultural Soil	LGDTLNRFAGALSSDAISDLLREFTPDMKRLFRKHAPKKILEIEDQLPTPADEKL*
Ga0070711_1001425642	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MNRFGGALSSDAIGDLLREFTPDMKRLFRKHAPKKIQEIEDKLPIPPEDKP*
Ga0070708_1000240363	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MNRFGGALSSDAIGYLLLEFTPDIKHFFRKHVPPKILKMEEKLPIPAEDKP*
Ga0070708_1015420542	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	ALSSDAITDLLREFTPDMKRFFRRHAPKKIRRIEEKLPIPADDKP*
Ga0070698_1017623631	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MNRFSGALSSDAIGYLLREFTPDMKRLFRKHAPKKILRIEEKLPIPPEDKP*
Ga0073909_106181141	3300005526	Surface Soil	FGGTMNRFGGALGSDAITDLLREFAPDMKHLFRKHVPKKILKIEEKLPIPPEDMP*
Ga0070731_107154292	3300005538	Surface Soil	LGDTLNRFAGALNSDAISDLLREFTPDMKRLFRKHAPKKILKIEEQLPIPADEKP*
Ga0066670_106914501	3300005560	Soil	MSRFSGALSSDAISDLLREFTPDMKSLFRKHAPKKILKIEEKFPIPEEDKP*
Ga0066703_101375662	3300005568	Soil	GDTMNRFSGALSSDAIGDLLREFAPDMKRLFRKHAPKKILKIEEKLPIPAEDKP*
Ga0066691_103305782	3300005586	Soil	MNRFGGALSSDAMGYLLLEFTPDVKHFFRKHSPKKNLEDVLKMEEKLPIPAED
Ga0070766_105531212	3300005921	Soil	TMNRFGGALSSDAMGNLLREFAPDIKRLFRKHAPKTILKIEENLPIPAEDKP*
Ga0080026_102781071	3300005952	Permafrost Soil	MDRFGGALSSDAIADLLREFTPDMKRLFRKHAPKRILEIEEKLPIPADNKP*
Ga0075030_1003731301	3300006162	Watersheds	IGDLQHEFMPDIKRLFRKHAPKEILKIEEKLPIPAEDKP*
Ga0070716_1016019622	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	TMNRFSGALSSDAIDDLLREFTPDMKRLFRKHAPKKILKIEEKLPIPEEDKP*
Ga0070712_1000885061	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	GALSSDAISDLLREFTPDMKRLFRKHAPKKILEIEDQLPTPADEKL*
Ga0073928_101118033	3300006893	Iron-Sulfur Acid Spring	FTGALISDATGNLLREFTPDLKRFFRKHAPKKILRIEEKLPIPADDKP*
Ga0099830_104125441	3300009088	Vadose Zone Soil	LTREFTPDIKRLFRKHAPKKILRIEEKLPIPADDKL*
Ga0099827_115540401	3300009090	Vadose Zone Soil	REFTPDMKRLFRKHAPKKILRIEERLPIPADDKP*
Ga0099827_117980851	3300009090	Vadose Zone Soil	PRHDRTFGDTMNRFGGALSSDAIGDLLREFTPDMKRLFRKHAPTKVLKIEEKVPIPAEDNP*
Ga0066709_1040335211	3300009137	Grasslands Soil	DAITDLLREFTPDMKRLFRRHAPKKIRRIEEKLPIPAEDKP*
Ga0105241_105882072	3300009174	Corn Rhizosphere	MNRFGGALSSDAITDLLLEFAPDMKRLFRKHAPKKILKIEEKLPIPPEDMP*
Ga0116133_10586281	3300009623	Peatland	RQDRNVGETMNRFTGALTSDAIGDLQHEFMPDIKRLFRKHAPTKILKIEEKLPIPAEDKP
Ga0116135_12156952	3300009665	Peatland	LQHEFMPDIKRLFRKHAPTKILKIEEKLPIPAEDKP*
Ga0134088_101798992	3300010304	Grasslands Soil	FGGALSSDAITDLLREFTPDMKRLFRRHAPKKIRRIEEKLPIPPEDKP*
Ga0134088_106038882	3300010304	Grasslands Soil	LREFTPDMKRLFRRHAPKKIRRIEEKLPIPADDKP*
Ga0134063_101894751	3300010335	Grasslands Soil	SSDAITDLLREFTPDMKRLFRRHAPKKIRRIEEKLPIPPEDKP*
Ga0126378_100660213	3300010361	Tropical Forest Soil	VDRFAGALSSDVTSDILHEFTPDMKRLFRKHAPEEIKKIEKELPIPDDDKP*
Ga0126381_1003565751	3300010376	Tropical Forest Soil	LSSDATSYILREFTPDIKRLFEKHTPEKIKKMERKLPIPADDKP*
Ga0137391_105830911	3300011270	Vadose Zone Soil	KEFTPDMKRLFRKHAPKKILSFEEKLPIPEDDEL*
Ga0137382_102750091	3300012200	Vadose Zone Soil	MNRFSGALSSDAVSDLLREFTPDMKSLFRKHAPKKILKIEEKLPIPEEDKP*
Ga0137363_102909181	3300012202	Vadose Zone Soil	HDRTFGDTMNRFAGALSSDAISNLIHEFTPDMKRLFRKHAPKKVLRIEEKLPIPAEDKP*
Ga0137363_110594392	3300012202	Vadose Zone Soil	RNVGETINRFGGALSSDAIGDLLREFTPDMKRLFRKHAPKKIQEIEDKLPIPPEDKP*
Ga0137363_115293201	3300012202	Vadose Zone Soil	DRTLGDTLNRFAGALSSDAISDLLQEFTPDMKRLFRKHAPKEILKIEERLPIPADEKP*
Ga0137362_117123452	3300012205	Vadose Zone Soil	ALSSDAITDLLGEFAPDMKRLFRKHAPKKILKIEEKLPISPEDKP*
Ga0137380_100450293	3300012206	Vadose Zone Soil	MNRFGGALSSDAMGYLLLEFTPDVKHFFRKHAPKKNLKMEEKLPIPAEDKP*
Ga0137377_111506922	3300012211	Vadose Zone Soil	TDLLREFTPDMKRLFRRHAPKKIRRIEEKLPIPAEDKP*
Ga0137361_112901581	3300012362	Vadose Zone Soil	TMNRFGGALSSDALGDLLREFTPDIERLFRKHAPKTILRIEEKLPIPPEDKP*
Ga0137361_118227711	3300012362	Vadose Zone Soil	FGGALSSDAIGDLLREFTPDMKRLFRKHAPTKVLKIEEKVPIPAEDKP*
Ga0137361_118992601	3300012362	Vadose Zone Soil	LLREFTPDMKRLFRRHAPKKIRRIEEKLPIPPEDKP*
Ga0137390_100412191	3300012363	Vadose Zone Soil	TMNRYSGALSSDAIGYLLREFTPDMKRLFRKHAPKKILRIEEKFPIPPEDKP*
Ga0137390_103887662	3300012363	Vadose Zone Soil	MNRFSGALSSDAIGYLLLEFTLDMKRFFRKHTPKKILKMDERLPVPAEDKPTPLLL*
Ga0137397_112122001	3300012685	Vadose Zone Soil	MNRFGGALSSDAIGDLLREFTPDMKRLFRKHVPKKIQEIEDKLPIPPEDKP*
Ga0137395_100577741	3300012917	Vadose Zone Soil	TFGDTMNRFGGALSSDAITDLLREFTPDMKRLFRKHAPKKILKIEEKLPISPEDKP*
Ga0137396_103709512	3300012918	Vadose Zone Soil	MNRFGGALSSDAMGNLLREFAPDIKRLFRKHAPKTILKIEENLPIPAEDKP*
Ga0137396_109996532	3300012918	Vadose Zone Soil	MNRFAGALSSDAISNLIREFTPDMKRLFRKHAPKKVLRIEEKLPIPAEDKP*
Ga0137413_103811222	3300012924	Vadose Zone Soil	SSDAITDLLREFAPDMKRLFRKHAPKKILKIEEKLPISPEDKP*
Ga0137404_115312981	3300012929	Vadose Zone Soil	FSGALSSDAIGDLLREFTPDMKRLFRKHAPRRILKIEEELPIPVADKP*
Ga0137407_118924822	3300012930	Vadose Zone Soil	ISYLLREFTPDMKRLFRKHAPDKIRKIEEKLPIPPEDKP*
Ga0137410_117624762	3300012944	Vadose Zone Soil	GDLLREFTPDMKRLFRKHAPKKILKIEEKLPIPAEDKP*
Ga0134075_103197831	3300014154	Grasslands Soil	FGGALSSDAITDLLREFTPDMKRLFRRHAPKKIRRIEEKLPIPAEDKP*
Ga0181531_109087042	3300014169	Bog	DRNFGETMSRFTGALSSDAIGDLQREFMPDIKRLFRKHAPKEILKLEEKLPIPAEDKP*
Ga0181537_109647371	3300014201	Bog	MNRFTGALTSDAIGDLQHEFMPDIKRLFRKHAPKEILKLEEKLPIPAEDKP*
Ga0182018_100037465	3300014489	Palsa	MNRFGGSVSSDAIGYLLLEFTPDVKGFFRKPAPTKILKMEEKLPLPAEDKP*
Ga0182018_104183121	3300014489	Palsa	SDAIGDLQREFTPDMKRLFRMHAPKEIRKIEEKLPIPADDKP*
Ga0182018_104554671	3300014489	Palsa	MNRFSGALSSDAIGDLQREFTPDMKRLFRKHAPKEIRKIEEKLPIPADDKP*
Ga0182014_100131727	3300014491	Bog	MNRFTGALSSDAIGELQREFTPDMKRLFRKHAPKEIRKIEDKSPIPADDKP*
Ga0182015_100722551	3300014495	Palsa	TMNRFSGALSSDAIGDLQREFTPDMKRLFRKHAPKEIRKIEQKLPIPADDKP*
Ga0182015_100794251	3300014495	Palsa	TMNRFSGALSSDAIGDLQREFTPDMKRLFRKHAPKEIRKIEEKLPIPADDKP*
Ga0182024_102428404	3300014501	Permafrost	GDLQREFTPDMKRLFRKHAPKEIRKIEQKLPIPADDKP*
Ga0137412_101366203	3300015242	Vadose Zone Soil	RNVGETINRFGGALSSDAIGDLLREFTPDMKHLFRKHAPKKIQEIEDKLPIPPEDKP*
Ga0137409_104389791	3300015245	Vadose Zone Soil	MNRLGGALCSDAIGDLLREFAPDIKRLFRKHSPRTILKIEEKLPIPAEDKP*
Ga0187807_12232601	3300017926	Freshwater Sediment	IGDLQHEFMPDIKRLFRKHAPKEILKIEEKLPIPVEDKP
Ga0187825_103773342	3300017930	Freshwater Sediment	YYPRHDRTFGDTMNRFAGALSSDAIGDLQHEFVPDIKRLFRKHAPKEILKIEEKLPIPAEDKP
Ga0187879_100745693	3300017946	Peatland	GETMNRFTGALTSDAIGDLQHEFMPDIKRLFRKHAPTKILKIEEKLPIPAEDKP
Ga0187879_105601872	3300017946	Peatland	QHEFMPDIKRLFRKHAPKEILKIEEKLPIPAEDKP
Ga0187876_12375281	3300018003	Peatland	TLNRFSGALSSDAIGELQREFTPDMKRLFRKHAPKEIRKIEDKSPIPADDKP
Ga0187805_100104764	3300018007	Freshwater Sediment	MNRFSGALSSDAMGDLQREFTPDIKRLFRKHAPREIRKTEEKLPIPAEDKP
Ga0187874_102179902	3300018019	Peatland	ALSSDAIGDLQHEFTPDLNRLFRKHAPKEIRKIEEKLPIPADDKL
Ga0187869_100138194	3300018030	Peatland	DAIGDLQHEFTPDLNRLFRKHAPKEIRKIEEKLPIPADDKL
Ga0187863_101006322	3300018034	Peatland	DLQREFTPDMKRLFRKHAPKEIRKIEEKLPIPAEDKP
Ga0187862_108485372	3300018040	Peatland	RQDRNFGETVNRFTGALSSDAIGNLQREFMPDIKRLFRKHAPKEIRKIEEKLPIPDDDKP
Ga0066662_121261232	3300018468	Grasslands Soil	MNRFSGALSSDAVGDLLREFAPDMKRLFRKHAPKKILKIEDKLPIPAEDKP
Ga0182025_11980175	3300019786	Permafrost	MNRFSGALSSDAIGNLQREFTPDMKRLFRKHAPKEIRKIEEKLPIPAEDKP
Ga0193726_10214221	3300020021	Soil	PDRTFGDTMNRFGGALSSDVIEDLLREFTPDMKRLFRKHAPKKILKIEERLPIPAEDKP
Ga0179594_101739712	3300020170	Vadose Zone Soil	MNRFGGALSSDAITNLLREFTPDMKRLFRRHAPKKIRRIEEKLPIPPEDKP
Ga0210407_105242861	3300020579	Soil	RTFGDTMNRFGGALSSDAIGDLLREFAPDIKRLFRKHSPKTILKIEENLPIPAEDKP
Ga0210407_105967401	3300020579	Soil	LREFTPDMKRLFRKHAPKEVLRIEEKLPIPADDKP
Ga0210399_100426601	3300020581	Soil	SRFTGAMSSDAIGNLLREFTPDMKRLFRKHAPKKLLRIEDKLPIPADDKP
Ga0210404_101737232	3300021088	Soil	GDLLREFTPDMKRLFRKHAPKEIQKIEERLPIPPEDKP
Ga0210406_101307243	3300021168	Soil	VSSDAVGNLLREFTPDMKRLFRKHAPEKIKKIEEKLPIPPEDKP
Ga0210405_101019532	3300021171	Soil	TMDRFSGALSSDVIGDLLREFTPDMKRLFRRHAPKKVLRIEEKLPIPAEDKP
Ga0210405_102429842	3300021171	Soil	MNRFAGALSSDAVGDLQREFMPDIKRLFRKHAPKEIRKIEEKLPIPADDKP
Ga0210405_110959272	3300021171	Soil	LLALSSDAISDLLREFTPDMKRLFRKHAPKEILKIEKRLPIPADEKP
Ga0210408_102384481	3300021178	Soil	YPRPDRTLGDTLSRFAGALSSDAISDLLQEFTPDMKRLFRKHAPKKILKIEERLPIPADEKP
Ga0210397_113444852	3300021403	Soil	SLLREFTPDMKRLFRKHAPKEVLRIEEKLPIPADDKP
Ga0210384_106068161	3300021432	Soil	AISDLLQEFTPDMKRLFRKHAPKKILKIEQRLPIPADEKP
Ga0210384_111356502	3300021432	Soil	LSSDVIGNLLHEFTPDMKRLFRRHAPKKILRIEEKLPIPAEDKL
Ga0210410_101615883	3300021479	Soil	MNRFSGALSSDAIEDLLREFTPDMKRLFHKHAPKRILRIEEKLPIPDEDKP
Ga0210409_1000091717	3300021559	Soil	MNRFGSALSSDVTGDLLREFTPDKMRLFRKHAPKEIQRIEEKLPIPPEDKQ
Ga0210409_115334192	3300021559	Soil	FGGALSSDAMGNLLREFAPDIKRLFRKHAPKTILKIEENLPIPAEDKP
Ga0242660_12119511	3300022531	Soil	GALSSDAIGDLLREFTPDMKSLFRKHAPKKMLKIEEKLPIPEEDKP
Ga0208935_10484411	3300025414	Peatland	PRQDRNFGETMNRFSGALSSDAIGDLQREFTPDMKRLFRKHAPKEIQKIEEKLPIPADDK
Ga0208691_10077444	3300025612	Peatland	RNFGETMNRFSGALSSDAIGDLQREFTPDMKRLFRKHAPKEIQKIEEKLPIPADDKP
Ga0208691_10578252	3300025612	Peatland	LQHEFMPDIKRLFRKHAPTKILKIEEKLPIPAEDKP
Ga0207684_1000515513	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MNRFGGALSSDAIGDLLREFTPDMKRLFRKHAPTKVLKIEEKVPIPAEDKP
Ga0207684_100210123	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MNRFGGALSSDAIGYLLLEFTPDIKHFFRKHVPPKILKMEEKLPIPAEDKP
Ga0207684_102588231	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	NRFGGALSSDAVGNLLREFTPDMKRLFRKHAPEKIKKIEEKLPIPPEDKP
Ga0207684_113288791	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	TDLLREFTPDMKRLFRRHAPKKIRRIEEKLPIPAEDKP
Ga0207654_106771432	3300025911	Corn Rhizosphere	ITDLLREFAPDMKHLFRKHAPKKILKIEEKLPIPPEDMP
Ga0207665_116692872	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	GDTMNRFSGALSSDAIDDLLREFTPDMKRLFRKHAPKKILKIEEKLPIPEEDKP
Ga0209152_101978272	3300026325	Soil	MNRFSGALSSDAIGDLLREFAPDMKRLFRKHAPKKILKIEEKLPIPAEDKP
Ga0209152_102072322	3300026325	Soil	SDAITDLLGEFAPDMKRLFRKHAPKEIRKIEEKLPIPPEDKP
Ga0257169_10281271	3300026469	Soil	AIGDLLREFTPDMKRLFRKHAPTKVLKIEEKVPIPAEDKP
Ga0257157_10740061	3300026496	Soil	RFSGALSSDAIGYLVREFTPDMKRLFRKHAPEKILRIEEKLPIPPEDKP
Ga0209806_13213232	3300026529	Soil	SDAIGDLLREFAPDMKRLFRKHAPKKILKIEEKLPIPAEDKP
Ga0209731_10043783	3300027326	Forest Soil	RTLGDTLSRFAGALSSDAISDLLQEFTPNMKRLFRKHAPKKILKIEERLPIPADEKP
Ga0209008_11390371	3300027545	Forest Soil	YPSDDRSLGETMNRFSGALSSDAVSNLLREFTPDMKRLFRKHAPKEVLRIEQKLPIPADDRP
Ga0209217_10320862	3300027651	Forest Soil	MNRFGGVLSSDAIGDLLREFTPDMKRLFRKHALKKILKIEEKLPIPADDKP
Ga0209736_10978901	3300027660	Forest Soil	MNRFSGALSSDAIGYLLRELTPDMKRLFRKHAPKKVLEIEEKLPIPPEDKP
Ga0208990_11240042	3300027663	Forest Soil	LLREFTPDMKRLFRKHAPKKIQRIEEKLPIPAEDKL
Ga0209908_100760362	3300027745	Thawing Permafrost	MNRFGGSVSSDAIGYLLLEFTPDVKGFFRKPAPTKILKMEEKLPLPAEDKP
Ga0209180_101159242	3300027846	Vadose Zone Soil	MTRFTGALSSDALGNLLKEFTPDMKRLFRKHAPKKILSFEEKLPIPEDDEL
Ga0209579_101787872	3300027869	Surface Soil	LGDTLNRFAGALNSDAISDLLREFTPDMKRLFRKHAPKKILKIEEQLPIPADEKP
Ga0209590_104377071	3300027882	Vadose Zone Soil	SSDAIGDLLREFTPDMKRLFRKHAPKKIQEIEDKLPIPPEDKP
Ga0209275_101698712	3300027884	Soil	YPRHDRNFDETMNRFAGALSSDAVGDLQREFMPDMKRLFRKHAPKEIRKIEEELPIPADDKP
Ga0209067_100273061	3300027898	Watersheds	TLNRFAGALSSDAIGDLQHEFMPDIKRLFRKHAPKEILKIEEKLPIPAEDKP
Ga0308309_106720152	3300028906	Soil	DALGNLLREFTPDMKRLFRRHAPKKILRIEEKLPIPADDKL
Ga0308309_108322601	3300028906	Soil	LQHEFMPDIKRLFRKHAPRKILKIEEKLPIPAEDKP
Ga0308309_115694802	3300028906	Soil	IDDLLREFTPDMKRFFRKHAPKKILKIEEKLPIPDEDKP
Ga0265770_10577761	3300030878	Soil	AVSNLLREFTPDMKRLFRKHAPKEVLRIEEKLPIPADDKP
Ga0170823_111455881	3300031128	Forest Soil	DRFSGALSSDAIDDLLREFTPDMKRLFRKHAPKKILKIEEKLPIPEEDKP
Ga0265325_100647992	3300031241	Rhizosphere	MNRFAGALSSDAIGDLQHEFMPDIKRLFRKHAPKEILKIEEKLPIPAEDKP
Ga0265339_100853681	3300031249	Rhizosphere	TFGDTMNRFAGALSSDAIGDLQHEFMPDIKRLFRKHAPKEILKIEEKLPIPAEDKP
Ga0310686_1080195531	3300031708	Soil	PSDDRSFGETMNRFGGALSSDAVSNLLREFTPDMKRLFRKHAPKEVLRIEEKLPIPADDK
Ga0307476_109404461	3300031715	Hardwood Forest Soil	DAIDDLLREFTPDMKRLFRKHAPKKILKIEEKLPIPDEDKP
Ga0307474_105469552	3300031718	Hardwood Forest Soil	MNRFSGALGSDAIEDLLREFTPDMKRLFHKHAPKKILRIEEKFPIPDEDKP
Ga0307477_102448221	3300031753	Hardwood Forest Soil	LLREFTPDMKRLFRKHAPKKILKIEERLPIPADEKP
Ga0307478_100423723	3300031823	Hardwood Forest Soil	MNRFSGALASDAIGYIQREFTPDMKSLFRKHAPKKILQIEEKLPIPAEDKL
Ga0307479_117296112	3300031962	Hardwood Forest Soil	DAIGDLILEFTPDMKRFFRKHAPKEIQRIEEKLPIPPEDKP
Ga0307471_1029421682	3300032180	Hardwood Forest Soil	TLGDTMNRFSGSLSSDAIGDLLREFTPDMKRLFHKHAPKKILKIEEKLPIPEADKP
Ga0307472_1001594322	3300032205	Hardwood Forest Soil	NRFGGALSSDAITDLLREFTPDMKRLFRRHAPKKIRRIEEKLPIPAEDKP
Ga0370515_0296539_25_180	3300034163	Untreated Peat Soil	MNRFAGALSSDAVGDLQREFTPDMKRLFRKHAPKEIRKIEEKLPIPADDKP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F053477

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences