Metagenome / Metatranscriptome Family F053463

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F053463
Family Type	Metagenome / Metatranscriptome
Number of Sequences	141
Average Sequence Length	56 residues
Representative Sequence	LVDVLVGPEAPLRDRVRATTAVLSVGATCMFFLQEVDDRDKLRAIVLEMATDLIS
Number of Associated Samples	121
Number of Associated Scaffolds	141

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	5.67 %
% of genes near scaffold ends (potentially truncated)	92.91 %
% of genes from short scaffolds (< 2000 bps)	88.65 %
Associated GOLD sequencing projects	116
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.72

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (62.411 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (20.567 % of family members)
Environment Ontology (ENVO)	Unclassified (17.021 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (46.809 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 50.60% β-sheet: 0.00% Coil/Unstructured: 49.40%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.72
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.72
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SCOP family	SCOP domain	Representative PDB	TM-score
c.108.1.0: automated matches	d3k1za1	3k1z	0.71088
a.73.1.1: Retrovirus capsid protein, N-terminal core domain	d1em9a_	1em9	0.70511
a.119.1.0: automated matches	d3v98a2	3v98	0.69912
a.4.5.58: Hypothetical protein PH1932	d1ulya_	1uly	0.68783
a.104.1.0: automated matches	d3awma_	3awm	0.68165

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 141 Family Scaffolds
PF13424	TPR_12	27.66
PF13412	HTH_24	5.67
PF01670	Glyco_hydro_12	4.26
PF01037	AsnC_trans_reg	2.84
PF13581	HATPase_c_2	2.84
PF00756	Esterase	2.13
PF04542	Sigma70_r2	2.13
PF03023	MurJ	2.13
PF00248	Aldo_ket_red	2.13
PF00440	TetR_N	1.42
PF13374	TPR_10	1.42
PF00498	FHA	1.42
PF00196	GerE	1.42
PF00941	FAD_binding_5	0.71
PF00723	Glyco_hydro_15	0.71
PF02773	S-AdoMet_synt_C	0.71
PF06250	YhcG_C	0.71
PF07690	MFS_1	0.71
PF13404	HTH_AsnC-type	0.71
PF02517	Rce1-like	0.71
PF13229	Beta_helix	0.71
PF05592	Bac_rhamnosid	0.71
PF13204	DUF4038	0.71
PF00115	COX1	0.71
PF00903	Glyoxalase	0.71
PF13578	Methyltransf_24	0.71
PF04307	YdjM	0.71
PF16697	Yop-YscD_cpl	0.71
PF04149	DUF397	0.71

COG ID	Name	Functional Category	% Frequency in 141 Family Scaffolds
COG0534	Na+-driven multidrug efflux pump, DinF/NorM/MATE family	Defense mechanisms [V]	2.13
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	2.13
COG0728	Lipid II flippase MurJ/MviN (peptidoglycan biosynthesis)	Cell wall/membrane/envelope biogenesis [M]	2.13
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	2.13
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	2.13
COG2244	Membrane protein involved in the export of O-antigen and teichoic acid	Cell wall/membrane/envelope biogenesis [M]	2.13
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	2.13
COG0192	S-adenosylmethionine synthetase	Coenzyme transport and metabolism [H]	0.71
COG1266	Membrane protease YdiL, CAAX protease family	Posttranslational modification, protein turnover, chaperones [O]	0.71
COG1988	Membrane-bound metal-dependent hydrolase YbcI, DUF457 family	General function prediction only [R]	0.71
COG3387	Glucoamylase (glucan-1,4-alpha-glucosidase), GH15 family	Carbohydrate transport and metabolism [G]	0.71
COG3408	Glycogen debranching enzyme (alpha-1,6-glucosidase)	Carbohydrate transport and metabolism [G]	0.71
COG4449	Predicted protease, Abi (CAAX) family	General function prediction only [R]	0.71
COG4804	Predicted nuclease of restriction endonuclease-like (RecB) superfamily, DUF1016 family	General function prediction only [R]	0.71

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	62.41 %
Unclassified	root	N/A	37.59 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	62.41 %
Unclassified	root	N/A	37.59 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	62.41 %
Unclassified	root	N/A	37.59 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	53.90 %
Unclassified	root	N/A	37.59 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.42 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	1.42 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.71 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	53.90 %
Unclassified	root	N/A	37.59 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	1.42 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.42 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.71 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	43.97 %
Unclassified	root	N/A	37.59 %
Patescibacteria group	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group	1.42 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.42 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.59 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	9.22 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	4.26 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	4.26 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	3.55 %
Parcubacteria group	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group	1.42 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.42 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.71 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.71 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.59 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	6.38 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	4.26 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	4.26 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	3.55 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.42 %
Candidatus Ryanbacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Ryanbacteria	1.42 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	1.42 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.71 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → environmental samples	0.71 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.71 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.59 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	6.38 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	3.55 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	2.13 %
Candidatus Ryanbacteria bacterium RIFCSPLOWO2_01_FULL_48_26	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Ryanbacteria → Candidatus Ryanbacteria bacterium RIFCSPLOWO2_01_FULL_48_26	1.42 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	1.42 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.42 %
uncultured Corynebacteriales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → environmental samples → uncultured Corynebacteriales bacterium	0.71 %
Sphaerisporangium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Sphaerisporangium	0.71 %
Micromonospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora	0.71 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.71 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.59 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	6.38 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	3.55 %
Candidatus Ryanbacteria bacterium RIFCSPLOWO2_01_FULL_48_26	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Ryanbacteria → Candidatus Ryanbacteria bacterium RIFCSPLOWO2_01_FULL_48_26	1.42 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	1.42 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.42 %
unclassified Micromonospora	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → unclassified Micromonospora	0.71 %
Sphaerisporangium siamense	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Sphaerisporangium → Sphaerisporangium siamense	0.71 %
Streptomyces coelicoflavus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces coelicoflavus	0.71 %
uncultured Corynebacteriales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → environmental samples → uncultured Corynebacteriales bacterium	0.71 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.71 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.59 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	6.38 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	3.55 %
Candidatus Ryanbacteria bacterium RIFCSPLOWO2_01_FULL_48_26	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Ryanbacteria → Candidatus Ryanbacteria bacterium RIFCSPLOWO2_01_FULL_48_26	1.42 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	1.42 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.42 %
Micromonospora sp. U56	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → unclassified Micromonospora → Micromonospora sp. U56	0.71 %
Sphaerisporangium siamense	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Sphaerisporangium → Sphaerisporangium siamense	0.71 %
Streptomyces coelicoflavus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces coelicoflavus	0.71 %
uncultured Corynebacteriales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → environmental samples → uncultured Corynebacteriales bacterium	0.71 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.71 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.71 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459018\|G1P06HT02F6U9D	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	500	Open in IMG/M
3300002245\|JGIcombinedJ26739_100900982	Not Available	767	Open in IMG/M
3300005345\|Ga0070692_10526991	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	770	Open in IMG/M
3300005435\|Ga0070714_100715895	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	966	Open in IMG/M
3300005435\|Ga0070714_100745667	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	946	Open in IMG/M
3300005437\|Ga0070710_10061650	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2136	Open in IMG/M
3300005466\|Ga0070685_11481326	All Organisms → cellular organisms → Bacteria	523	Open in IMG/M
3300005537\|Ga0070730_10585287	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	713	Open in IMG/M
3300005541\|Ga0070733_10276231	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1108	Open in IMG/M
3300005549\|Ga0070704_101482640	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces coelicoflavus	624	Open in IMG/M
3300005610\|Ga0070763_10038325	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2228	Open in IMG/M
3300005610\|Ga0070763_10042389	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2134	Open in IMG/M
3300005842\|Ga0068858_100999375	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	820	Open in IMG/M
3300006028\|Ga0070717_10519666	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1077	Open in IMG/M
3300006031\|Ga0066651_10564880	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	604	Open in IMG/M
3300006059\|Ga0075017_100153299	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1642	Open in IMG/M
3300006174\|Ga0075014_100403525	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	746	Open in IMG/M
3300006175\|Ga0070712_100094057	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2202	Open in IMG/M
3300006354\|Ga0075021_10437914	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	823	Open in IMG/M
3300006578\|Ga0074059_12163521	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	751	Open in IMG/M
3300006606\|Ga0074062_12567573	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	716	Open in IMG/M
3300006804\|Ga0079221_10489323	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	794	Open in IMG/M
3300009522\|Ga0116218_1242515	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	810	Open in IMG/M
3300009545\|Ga0105237_10893248	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	895	Open in IMG/M
3300009545\|Ga0105237_12499597	Not Available	527	Open in IMG/M
3300009683\|Ga0116224_10564044	Not Available	544	Open in IMG/M
3300009698\|Ga0116216_10781572	Not Available	573	Open in IMG/M
3300010047\|Ga0126382_11684785	All Organisms → cellular organisms → Bacteria	591	Open in IMG/M
3300010341\|Ga0074045_10538095	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	748	Open in IMG/M
3300010371\|Ga0134125_10104282	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Ryanbacteria → Candidatus Ryanbacteria bacterium RIFCSPLOWO2_01_FULL_48_26	3157	Open in IMG/M
3300010373\|Ga0134128_12195501	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	608	Open in IMG/M
3300010375\|Ga0105239_12130480	Not Available	652	Open in IMG/M
3300010379\|Ga0136449_100076552	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	7103	Open in IMG/M
3300010379\|Ga0136449_100427247	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2336	Open in IMG/M
3300010399\|Ga0134127_13275600	Not Available	529	Open in IMG/M
3300010876\|Ga0126361_10412845	Not Available	564	Open in IMG/M
3300011120\|Ga0150983_13211472	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	903	Open in IMG/M
3300012210\|Ga0137378_10631440	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	981	Open in IMG/M
3300012357\|Ga0137384_10797362	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	764	Open in IMG/M
3300012362\|Ga0137361_10895385	All Organisms → cellular organisms → Bacteria	805	Open in IMG/M
3300012363\|Ga0137390_10031228	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	5076	Open in IMG/M
3300012385\|Ga0134023_1147042	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	518	Open in IMG/M
3300012513\|Ga0157326_1080314	Not Available	532	Open in IMG/M
3300012958\|Ga0164299_10303047	Not Available	983	Open in IMG/M
3300013308\|Ga0157375_10466812	Not Available	1428	Open in IMG/M
3300014200\|Ga0181526_10654584	Not Available	663	Open in IMG/M
3300014745\|Ga0157377_10536112	Not Available	824	Open in IMG/M
3300014969\|Ga0157376_11635420	All Organisms → cellular organisms → Bacteria	679	Open in IMG/M
3300015265\|Ga0182005_1197426	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	604	Open in IMG/M
3300015374\|Ga0132255_100187297	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2919	Open in IMG/M
3300016270\|Ga0182036_10204129	All Organisms → cellular organisms → Bacteria	1451	Open in IMG/M
3300016270\|Ga0182036_11306613	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → environmental samples → uncultured Corynebacteriales bacterium	605	Open in IMG/M
3300016422\|Ga0182039_10557153	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	997	Open in IMG/M
3300016445\|Ga0182038_10433722	Not Available	1109	Open in IMG/M
3300017822\|Ga0187802_10341181	Not Available	588	Open in IMG/M
3300017924\|Ga0187820_1202886	Not Available	619	Open in IMG/M
3300017937\|Ga0187809_10279308	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	611	Open in IMG/M
3300017942\|Ga0187808_10091849	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1315	Open in IMG/M
3300017955\|Ga0187817_10634484	Not Available	681	Open in IMG/M
3300017974\|Ga0187777_10763878	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	689	Open in IMG/M
3300017975\|Ga0187782_10388079	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → unclassified Micromonospora → Micromonospora sp. U56	1060	Open in IMG/M
3300018007\|Ga0187805_10108453	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	1257	Open in IMG/M
3300018043\|Ga0187887_10328772	Not Available	902	Open in IMG/M
3300018046\|Ga0187851_10227481	Not Available	1099	Open in IMG/M
3300018085\|Ga0187772_10892746	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	645	Open in IMG/M
3300018468\|Ga0066662_10704647	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	964	Open in IMG/M
3300020581\|Ga0210399_10042324	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Sphaerisporangium → Sphaerisporangium siamense	3650	Open in IMG/M
3300020582\|Ga0210395_10392153	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1044	Open in IMG/M
3300020583\|Ga0210401_10303941	Not Available	1456	Open in IMG/M
3300021178\|Ga0210408_11087568	Not Available	615	Open in IMG/M
3300021388\|Ga0213875_10358744	Not Available	693	Open in IMG/M
3300021388\|Ga0213875_10588696	Not Available	537	Open in IMG/M
3300021401\|Ga0210393_10956232	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	694	Open in IMG/M
3300021407\|Ga0210383_10576974	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	970	Open in IMG/M
3300021407\|Ga0210383_10678064	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	887	Open in IMG/M
3300021474\|Ga0210390_10158777	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1906	Open in IMG/M
3300021474\|Ga0210390_11075697	Not Available	654	Open in IMG/M
3300021474\|Ga0210390_11144430	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	630	Open in IMG/M
3300021559\|Ga0210409_10315876	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1407	Open in IMG/M
3300021559\|Ga0210409_11563952	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	535	Open in IMG/M
3300022716\|Ga0242673_1106876	Not Available	547	Open in IMG/M
3300023551\|Ga0247546_106547	Not Available	503	Open in IMG/M
3300025898\|Ga0207692_10396300	Not Available	860	Open in IMG/M
3300025898\|Ga0207692_10768599	Not Available	629	Open in IMG/M
3300025906\|Ga0207699_10337709	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1061	Open in IMG/M
3300025916\|Ga0207663_10026888	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Ryanbacteria → Candidatus Ryanbacteria bacterium RIFCSPLOWO2_01_FULL_48_26	3345	Open in IMG/M
3300025916\|Ga0207663_10361626	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1101	Open in IMG/M
3300025916\|Ga0207663_10986177	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	676	Open in IMG/M
3300025922\|Ga0207646_11023185	Not Available	729	Open in IMG/M
3300025928\|Ga0207700_10268094	Not Available	1465	Open in IMG/M
3300025928\|Ga0207700_10449448	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1136	Open in IMG/M
3300025935\|Ga0207709_10032934	All Organisms → cellular organisms → Bacteria	3039	Open in IMG/M
3300025939\|Ga0207665_10045477	All Organisms → cellular organisms → Bacteria	2940	Open in IMG/M
3300025960\|Ga0207651_12015917	Not Available	519	Open in IMG/M
3300026551\|Ga0209648_10246210	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1327	Open in IMG/M
3300027692\|Ga0209530_1209256	Not Available	536	Open in IMG/M
3300027768\|Ga0209772_10143222	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	748	Open in IMG/M
3300027854\|Ga0209517_10061213	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2745	Open in IMG/M
3300027855\|Ga0209693_10196788	Not Available	992	Open in IMG/M
3300027857\|Ga0209166_10085415	Not Available	1778	Open in IMG/M
3300027894\|Ga0209068_10887479	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	527	Open in IMG/M
3300027908\|Ga0209006_10939150	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	692	Open in IMG/M
3300027908\|Ga0209006_11446170	Not Available	523	Open in IMG/M
3300028801\|Ga0302226_10289344	Not Available	691	Open in IMG/M
3300030057\|Ga0302176_10200203	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	797	Open in IMG/M
3300030399\|Ga0311353_10885635	Not Available	755	Open in IMG/M
3300030509\|Ga0302183_10246590	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	694	Open in IMG/M
3300030618\|Ga0311354_11892418	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	516	Open in IMG/M
3300030659\|Ga0316363_10254426	Not Available	714	Open in IMG/M
3300030730\|Ga0307482_1263253	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	545	Open in IMG/M
3300031234\|Ga0302325_11661204	Not Available	810	Open in IMG/M
3300031234\|Ga0302325_11865764	Not Available	749	Open in IMG/M
3300031544\|Ga0318534_10114009	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1552	Open in IMG/M
3300031668\|Ga0318542_10692704	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	533	Open in IMG/M
3300031680\|Ga0318574_10726774	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	582	Open in IMG/M
3300031681\|Ga0318572_10061167	Not Available	2054	Open in IMG/M
3300031708\|Ga0310686_110324896	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1057	Open in IMG/M
3300031715\|Ga0307476_11184360	Not Available	560	Open in IMG/M
3300031744\|Ga0306918_11374813	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	542	Open in IMG/M
3300031751\|Ga0318494_10373119	Not Available	826	Open in IMG/M
3300031754\|Ga0307475_10340113	Not Available	1206	Open in IMG/M
3300031777\|Ga0318543_10572956	Not Available	506	Open in IMG/M
3300031781\|Ga0318547_10708810	Not Available	626	Open in IMG/M
3300031781\|Ga0318547_10989340	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	526	Open in IMG/M
3300031793\|Ga0318548_10528548	Not Available	576	Open in IMG/M
3300031796\|Ga0318576_10301044	Not Available	757	Open in IMG/M
3300031833\|Ga0310917_10668051	Not Available	704	Open in IMG/M
3300031835\|Ga0318517_10200528	Not Available	899	Open in IMG/M
3300031941\|Ga0310912_11059166	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	621	Open in IMG/M
3300032001\|Ga0306922_10989048	Not Available	869	Open in IMG/M
3300032067\|Ga0318524_10210670	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	995	Open in IMG/M
3300032090\|Ga0318518_10506995	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	618	Open in IMG/M
3300032160\|Ga0311301_10074296	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	7101	Open in IMG/M
3300032160\|Ga0311301_10802874	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1292	Open in IMG/M
3300032160\|Ga0311301_12516667	Not Available	575	Open in IMG/M
3300032261\|Ga0306920_100978427	Not Available	1233	Open in IMG/M
3300032261\|Ga0306920_101543631	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	947	Open in IMG/M
3300032770\|Ga0335085_10426785	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1532	Open in IMG/M
3300032805\|Ga0335078_10369271	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1898	Open in IMG/M
3300032828\|Ga0335080_11403660	Not Available	694	Open in IMG/M
3300033289\|Ga0310914_11003450	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	735	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	89.36%
Host-Associated	Host-Associated	9.93%
Engineered	Engineered	0.71%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	79.43%
Aquatic	Environmental → Aquatic	9.93%
Plants	Host-Associated → Plants	9.93%
Solid Waste	Engineered → Solid Waste	0.71%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	74.47%
Freshwater	Environmental → Aquatic → Freshwater	7.09%
Rhizosphere	Host-Associated → Plants → Rhizosphere	6.38%
Peat	Environmental → Terrestrial → Peat	4.96%
Sediment	Environmental → Aquatic → Sediment	2.84%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.13%
Roots	Host-Associated → Plants → Roots	1.42%
Grass	Engineered → Solid Waste → Grass	0.71%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	51.06%
Loam	Environmental → Terrestrial → Soil → Loam	18.44%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	7.09%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.67%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.96%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	4.96%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.84%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.42%
Unclassified	Host-Associated → Plants → Roots → Unclassified	1.42%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.71%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.71%
Composting	Engineered → Solid Waste → Grass → Composting	0.71%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	28.37%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.86%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	12.77%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.67%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.67%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.96%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	4.96%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	4.26%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.84%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.84%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.13%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.42%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	1.42%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.71%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.71%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.71%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.71%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	20.57%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	10.64%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	7.09%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.67%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	4.96%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	4.26%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.55%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.84%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.13%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.13%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.13%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.13%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.13%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.13%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.13%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.13%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.13%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	1.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.42%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.42%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.42%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	1.42%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.71%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.71%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.71%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.71%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.71%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.71%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.71%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.71%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.71%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.71%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.71%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.71%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.71%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.71%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.71%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459018	Litter degradation MG2	Engineered	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300006578	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006606	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009683	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010876	Boreal forest soil eukaryotic communities from Alaska, USA - W5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012385	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_4_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012513	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.2.old.250510	Host-Associated	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014200	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG	Environmental	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015265	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017937	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_4	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental	Open in IMG/M
3300018046	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_10	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021388	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8	Host-Associated	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022716	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300023551	Metatranscriptome of soil microbial communities from Bohemian Forest, Czech Republic ? CSA4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027692	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O1 (SPAdes)	Environmental	Open in IMG/M
3300027768	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028801	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_3	Environmental	Open in IMG/M
3300030057	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_1	Environmental	Open in IMG/M
3300030399	II_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300030509	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_2	Environmental	Open in IMG/M
3300030618	II_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030659	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG (v2)	Environmental	Open in IMG/M
3300030730	Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
2MG_00220270	2170459018	Switchgrass, Maize And Mischanthus Litter	WAPDAPLRDRVRATTAVLSVGATCMFFLDQVDDRDKLRAIVLEMAADLTG
JGIcombinedJ26739_1009009822	3300002245	Forest Soil	VDLLAGPDAPLRERVRATAALLSVGATCHVYLQQAEDPDKLRAIITEIATDLIR*
Ga0070692_105269912	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	ARVRVRLNALVDVLVGPEAPLRDRVRATTAVLSVGATCMFFLQEVDDRDKLRAIVLEMATDLIS*
Ga0070714_1007158952	3300005435	Agricultural Soil	LVDVLVGPEAPLRDRVRATTAVLSVGATCMFFLQEVDDRDKLRAIVLEMATDLIS*
Ga0070714_1007456671	3300005435	Agricultural Soil	VLVGPEAPLRDRVRATTAVLSVGATCMFFLQEVDDRDKLRAIVLEMATDLIS*
Ga0070710_100616501	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	ARVRIRLDALVDLLVGSDAPLRDRVRATTAVLSVGATCMFFLQEVNDRDKLRAIVLEMATDLIS*
Ga0070685_114813261	3300005466	Switchgrass Rhizosphere	PEAPLRDRVRATTAVLSVGATCMFFLQEVDDRDKLRAIVLEMATDLIS*
Ga0070730_105852872	3300005537	Surface Soil	DRLDTLVDLLAGPDAPLRARVRATAATLTVGAISHVYRQQVDDPDKLRAIILEIATDLIH
Ga0070733_102762312	3300005541	Surface Soil	MLAGPDAPLRDRVRATAAVLLSRDHMFYLQQVDDPDKLAIILELAID*
Ga0070704_1014826401	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	VDVLAGPDAPLRDRVRATSAVLATGATCMFYLQQVDDPDKLRAIVLEIATDLIG*
Ga0070763_100383251	3300005610	Soil	GPDAPLRERVRATAATLTVGATCHVYLQQVDDPDKLRAIILEIATDLIH*
Ga0070763_100423891	3300005610	Soil	LVDLLAGPDAPLRERVRATAATLTVGATCHVYLQQVDDPDKLRAIILEIATDLIH*
Ga0068858_1009993751	3300005842	Switchgrass Rhizosphere	DVLVGPEAPLRDRVRATTAVLSVGATCMFFLQEVDDRDKLRAIVLEMATDLIS*
Ga0070717_105196661	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	RLDALVDVLVGAEAPLRDRVRATTAMLAVGATCMFFLQQVDDQDKLRAIVLEMATDLT*
Ga0066651_105648801	3300006031	Soil	SDAPLRDRVRATTAVLSVGATCMFFLQEVDDRDKLRAIVLEMATDLIS*
Ga0075017_1001532991	3300006059	Watersheds	GPEAALRDRVRATTAVLAVGATCMFFLQQVDDPDKLRAIVLEIATDLIPVTR*
Ga0075014_1004035252	3300006174	Watersheds	VDVLAGPEAPLRDRVRATTAVLAVGATCMFFLQQVDDQDKLRAIVLEMATDLIPVDR*
Ga0070712_1000940572	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	RLDALVDLLVGSDAPLRDRVRATTAVLSVGATCMFFVQEVDDRDKLRAIVLEMATDLIS*
Ga0075021_104379142	3300006354	Watersheds	FRGRLDALVDLLAGPDAPLRERVRATAATLTVGATCHVYLQQVDDPDKLRAIILEIATDLIH*
Ga0074059_121635212	3300006578	Soil	VRVRLNALVDVLVGPEAPLRDRVRATTAVLSVGATCMFFLQEVDDRDKLRAIVLEMATDLIS*
Ga0074062_125675732	3300006606	Soil	LNALVDVLVGPEAPLRDRVRATTAVLSVGATCMFFLQEVDDRDKLRAIVLEMATDLIS*
Ga0079221_104893231	3300006804	Agricultural Soil	DALVEVLVGPDAPLRDRVRATTAVLSVGATCMFFLDQVDDREKLRAIVLEMAADLTG*
Ga0116218_12425152	3300009522	Peatlands Soil	ALVDVLAGPDAPPRDRVRTTAAVLSVGATYMFYLQQAEDQDKLGAIILELATDLTH*
Ga0105237_108932481	3300009545	Corn Rhizosphere	VLVDPEAPLRDRVRATTAVLSVRATCMFFLQEVDDRDKLRAIVLEMATDLIS*
Ga0105237_124995972	3300009545	Corn Rhizosphere	GPEAPLRDRVRATTAVLSVGATCMFFLQEVDDRDKLRAIVLEMATDLIS*
Ga0116224_105640442	3300009683	Peatlands Soil	EAPLRDRVRATTATLAVGATCMFFLQQIDDQDKLRAIVLEIATDLIG*
Ga0116216_107815721	3300009698	Peatlands Soil	APLRDRVRATTAVLAVGATCMFYLQQVDDRDKLRAIVLEIATDLTG*
Ga0126382_116847851	3300010047	Tropical Forest Soil	ALVDVLVGSDAPLRDRVRATTAVLSVGATCMFFLQQVDDREKLRAIVLEMATDLIPVTR*
Ga0074045_105380952	3300010341	Bog Forest Soil	LAGPEAPLRDRVRATTAVLAVGATCVFYLQQVDEVDKLRAIVLEMATDLTS*
Ga0134125_101042822	3300010371	Terrestrial Soil	VDVLAGPDAPLRDRVRATSAVLATGATCMFYLQQVDDPDKLRAIVLEIATDLIN*
Ga0134128_121955012	3300010373	Terrestrial Soil	VLVGQDAPLRDRVRATTAVLSVGATCMFFLDQVDDRDKLRAIVLEMAADLTS*
Ga0105239_121304802	3300010375	Corn Rhizosphere	VDVLVGPEAPLRDRVRATTAVLSVGATCMFFLQEVDDRDKLRAIVLEMATDLIS*
Ga0136449_1000765521	3300010379	Peatlands Soil	APLRDRVRATTAVLAVGATCVFYLQQVDDQDKLRAIVLEMATDLIPVDR*
Ga0136449_1004272471	3300010379	Peatlands Soil	RDRLDVLVDILAGPEAPLRDRVRATTATLAVGATCMFFLQQVDDQDKLRAIVLEIATDLTS*
Ga0134127_132756001	3300010399	Terrestrial Soil	GALRRFHDRLDGLVDVLAGPDAPLRDRVRATSAVLATGATCMFYLQQVDDPDKLRAIVLEIATDLIG*
Ga0126361_104128452	3300010876	Boreal Forest Soil	LDDLVDVLVGSGAPLRDRVRASTAVLAVGATCHFYLQQVDDPDKLRAIILETATDLIH*
Ga0150983_132114722	3300011120	Forest Soil	PEASLRDRVRATTAVLAVGATCVFYLSQVDDLDKLRAIVLEMATDLTG*
Ga0137378_106314402	3300012210	Vadose Zone Soil	VLVGPEAPLRDRARATTAVPSVGATCMFFLQEVDDRDKLRAIVLEMATDLIS*
Ga0137384_107973622	3300012357	Vadose Zone Soil	VLVGQDAPLRDRVRATTAVLSAGATCMFFLDQVDDRDKLRAIVLELAADLTG*
Ga0137361_108953853	3300012362	Vadose Zone Soil	VLAGPEAPLRDRVRAATAVLAVGATCMFYRQQVEDQDKLRAIVLEIATDLILVSR*
Ga0137390_100312281	3300012363	Vadose Zone Soil	HGAPLRDRVRATTAVLAVGATCMFFRQQVDDQDKLRAIVLEMATDLTS*
Ga0134023_11470421	3300012385	Grasslands Soil	EAPLRDRVRATTAVLSVGATCMFFLQEVDDRDKLRAIVLEMATDLIS*
Ga0157326_10803141	3300012513	Arabidopsis Rhizosphere	ALVDVLVGPEAPLRDRVRATTAVLSVGATCMFFLQEVDDRDKLRAIVLEMATDLIS*
Ga0164299_103030472	3300012958	Soil	VRVRRNARVDVLVGPEAPLRDRVRATTAVLSVGATCMFFLQEVDDRDKLRALVLEMATDLIG*
Ga0157375_104668122	3300013308	Miscanthus Rhizosphere	LVGPEAPLRDRVRATTAVLSVGATCMFFLQEVDDRDKLRAIVLEMATDLIS*
Ga0181526_106545841	3300014200	Bog	VDVLAGPEAPLRDRVRATTAVLAAGATCMFYLQQVDDHDKLRAIVLEIATDLTG*
Ga0157377_105361121	3300014745	Miscanthus Rhizosphere	TRSRSGASGLNALVDVLVGPEAPLRDRVRATTAVLSVGATCMFFLQEVDDRDKLRAIVLEMATDLIS*
Ga0157376_116354201	3300014969	Miscanthus Rhizosphere	RLDGLVDVLAGPDAPLRDRVRATSAVLATGATCMFYLQQVDDPDKLRAIVLEIATDLIG*
Ga0182005_11974262	3300015265	Rhizosphere	RLDALVEVLVGPDAPLRDRVRATTAVLSVGATCMFFLDQVDDRDKLRAIVLEMAADLTG*
Ga0132255_1001872971	3300015374	Arabidopsis Rhizosphere	LVEVLVGQDAPLRDRVRGTTAVLSAGATCMFFLDQVDDRDKLRAIVLEMATDLIS*
Ga0182036_102041291	3300016270	Soil	LLAGAEAPLRDRMRATAAVLSVGATCHFYLQQVDDPDKLRAIVLEIATDLIS
Ga0182036_113066131	3300016270	Soil	VDLLAGPDAPLRDRVRASTAVLAVGATCHVYLQQVDDPDKLRAIVLEIALDLIH
Ga0182039_105571531	3300016422	Soil	LVGAEAPLRDRVRATTAVLSVGMTCMFFLQQVDDRDKLRAIVLEMATDLIS
Ga0182038_104337222	3300016445	Soil	LAGPGAPLRDRVRATAAMLSGGATCHVYLQQVDDPDKLRAIALELATDLIH
Ga0187802_103411812	3300017822	Freshwater Sediment	FRGRLDTLVDLLAGPDAPLRDRVRATTAVLAVGATCLFYLQQVDDPDKLRAIVLETANDLIH
Ga0187820_12028861	3300017924	Freshwater Sediment	VRFRGRLDALVDLLAGPDASLRDRVRATTAVLSVGATCLFYVHQVDDPDKLRAIVLETANDLIH
Ga0187809_102793082	3300017937	Freshwater Sediment	FRGRLDVLVDLLAGPGAPLRDRVRATAAMLSVGVTCHVYQQQADDPDKLRAIVLEIATDLIR
Ga0187808_100918491	3300017942	Freshwater Sediment	VLAGPDAPLRDRVRATAAVVSVGSTYMFYLQQVDDQDKLGEIILELATDLTH
Ga0187817_106344842	3300017955	Freshwater Sediment	VLVRSEAALRDRVRATTAVFAVCASCMFFLQQVDDPDKLRAITLEMATDLIH
Ga0187777_107638781	3300017974	Tropical Peatland	RLATLADLLAGPAAPLREPVRATYAVLSAGATCMFYLQQVDDRDKLRAIVLEIATDLIQ
Ga0187782_103880792	3300017975	Tropical Peatland	GLLAGPDAPLRDRVRATAAVLSVSATCLFYLQQVDDPDKLRAIVLEMATDLIH
Ga0187805_101084532	3300018007	Freshwater Sediment	AGPDAPLRDRVRATTAVLAVGATCLFYLQQVDDPDKLRAIVLETANDLIH
Ga0187887_103287722	3300018043	Peatland	RLDDLVDVLVGPAAPLRDRVRASTAVIAVGATCRFFLQQSDDRDKLRAIVLEIATDLIPVDR
Ga0187851_102274811	3300018046	Peatland	HFRDRLDDLVDVLVGPAAPLRDRVRASTAVIAVGATCRFFLQQSDDRDKLRAIVLEIATDLIPVDR
Ga0187772_108927461	3300018085	Tropical Peatland	RLTRFRGRLDALVDLLAGPGAALRERVRATTAILAVGATCMFYLQQVDDPDKLRAIILETALDLIH
Ga0066662_107046471	3300018468	Grasslands Soil	RVRLNALVDVLVGAEAPLRDRVRATTAVLSVGATCMFFLQEVDDRDKLRAIVLEMATDLI
Ga0210399_100423244	3300020581	Soil	RLDALVDLLAGPDAPLRERVRATAATLTVGATCHVYLQQVDDPDKLRAIILEIATDLIH
Ga0210395_103921532	3300020582	Soil	GPDAPLRDRVLATTAVLSVGATCMFYLQQVDDPDKLRAIVLEIATDLIH
Ga0210401_103039414	3300020583	Soil	DALVDLLAGPDAPLRERVRATAATLTVGATCHVYLQQVDDPDKLRAIILEIATDLIH
Ga0210408_110875682	3300021178	Soil	SDAPLRDRVRATTAVLSVGAICMFFLQEVNDREKLRAIVLEMATDLIG
Ga0213875_103587442	3300021388	Plant Roots	RGRLEALVDLLADADAPLRDRVRATTAVLSVGATCHVYLQQVDDPDKLRAIVLEIATDLI
Ga0213875_105886961	3300021388	Plant Roots	GPGASLRSRVRATTAVLSMGATCLFYLHQVDDPDKLRAIVLEIATDLIH
Ga0210393_109562322	3300021401	Soil	VDLLAGPDAPLRERVRATAATLTVGATCHVYLQQVDDPDKLRAIILEIATDLLR
Ga0210383_105769743	3300021407	Soil	RLDALVDLLAGPDAPLRERVRATAATLTVGATCHVYLQQVDDPDKLRAIILEIATDLIN
Ga0210383_106780642	3300021407	Soil	GRLDALVDLLAGPDAPLRERVRATAATLTVGATCHVYLQQVDDPDKLRAIILEIATDLIH
Ga0210390_101587773	3300021474	Soil	ARFRGRLDALVDLLAGPDAPLRERVRATAATLTVGATCHVYLQQVDDPDKLRAVILEIATDLIH
Ga0210390_110756971	3300021474	Soil	AGPDAPLRERVRATAATLTVGATCHVYLQKVDDPDKLRAIILEIATDLIH
Ga0210390_111444301	3300021474	Soil	FTRFRDRLDALVELLAGPDAPLRDRVRATTAVLSVGATCMFYLQQVDDPDKLRAIVLEIATDLIH
Ga0210409_103158761	3300021559	Soil	IRLDALVDLLVGSDAPLRDRVRATTAVLSVGAICMFFLQEVNDREKLRAIVLEMATDLIG
Ga0210409_115639521	3300021559	Soil	RIRLDALVDLLVGSDAPLRDRVRATTAVLSVGATCMFFLQEVNDRDKLRAIVLEMATDLI
Ga0242673_11068762	3300022716	Soil	LLAGPDAPLRERVRATAATLTVGATCHVYLQRVDDPDKLRAIILEIATDLIR
Ga0247546_1065472	3300023551	Soil	TPARCRNVKGRDAPLRDRVRATAAVVSVGSTYMFYLQQVDDPDKLGAIILELATDLTH
Ga0207692_103963002	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	RARIRLDALVDLLVGSDAPLRDRVRATTAVLSAGATCMFFVQEVDDRDKLRAIVLEMATDLIS
Ga0207692_107685992	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	VRLNALVDVLVGPEAPLRDRVRATTAVLSVGATCMFFLQEVDDRDKLRAIVLEMATDLIS
Ga0207699_103377091	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	LVEVLVGQDAPLRDRVRATTAVLSVGATCMFFLDQVDDRDKLRAIVLEMAADLTG
Ga0207663_100268881	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	FARFRDRLDGLVDVLAGPDAPLRDRVRATSAVLATGATCMFYLQQVDDPDKLRAIVLEIATDLIG
Ga0207663_103616261	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	LVGAGAPLRDRVRATTAVLSVGATCMFFLEQVNDRDKLRAIVLEMATDLIS
Ga0207663_109861771	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	RLNALVDVLVGPEALLRDRVRATTAVLSVGATCMFFLQEVDDRDKLRAIVLEMATDLIS
Ga0207646_110231852	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	VLAGPDAPLRDRVRATSAVLATGATCMFYLQQVDDPGKLRAIVLEIATDLIG
Ga0207700_102680941	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	LNALVDVLVGPEAPLRDRVRATTAVLSVGATCMFFLQEVDDRDKLRAIVLEMATDLIS
Ga0207700_104494482	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	QDAPLRDRVRATTAVLSVGATCMFFLDQVDDRDKLRAIVLEMAADLTG
Ga0207709_100329341	3300025935	Miscanthus Rhizosphere	GPEAPLRDRVRATTAVLSVGATCMFFLQEVDDRDKLRAIVLEMATDLIS
Ga0207665_100454773	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	AGQGALRRFHDRLDGLVDVLAGPDAPLRDRVRATSAVLATGATCMFYLQQVDDPDKLRAIVLEIATDLIN
Ga0207651_120159171	3300025960	Switchgrass Rhizosphere	AGQGALRRFHDRLDGLVDVLAGPDAPLRDRVRATSAVLATGATCMFYLQQVDDPDKLRAIVLEIATDLIG
Ga0209648_102462101	3300026551	Grasslands Soil	VILVRKRARAAGCGRLDALVDVLAGPEAPLRDRVRAATAVLAVGATCMFFLQQVDDKDKLRAIVLEIATDLIPVSR
Ga0209530_12092561	3300027692	Forest Soil	ALLAGPDAPLRERVRATAATLTVGAICHVYLTQVDDPDKLRAVILEIATDLIH
Ga0209772_101432223	3300027768	Bog Forest Soil	IAGQDAPLRDRVRATTAVLAAGASCMFYLQQVDDPDKLRAIIVEIATDLTR
Ga0209517_100612133	3300027854	Peatlands Soil	FRDRLDVLVDILAGPEAPLRDRVRATTATLAVGATCMFFLQQVDDQDKLRAIVLEIATDLTS
Ga0209693_101967882	3300027855	Soil	LVDLLAGPDAPLRERVRATAATLTVGATCHVYLQQVDDPDKLRAIILEIATDLIH
Ga0209166_100854151	3300027857	Surface Soil	DTLVDLLAGPDAPLRERVRATAATLTVGAICHVYRQQVDDPDKLRAIILEIATDLIH
Ga0209068_108874792	3300027894	Watersheds	FRGRLDALVDLLAGPDAPLRERVRATAATLTVGATCHVYLQQVDDPDKLRAIILEIATDLIH
Ga0209006_109391502	3300027908	Forest Soil	EAELRDRVRATTAILAVGATCMFYLQRVDDQDKLRAIVLEMATDLTS
Ga0209006_114461702	3300027908	Forest Soil	LVNLIVGQDAPLRDRVRATTAVLAAGASCMFYLQQVDDPDKLRAIIVEIATDLTR
Ga0302226_102893441	3300028801	Palsa	DRLDDFIDVLVGPDAPLRSRVRASTAVLAAGASCRFFLEQADDRDKLRAIVLEIATDLIPVDR
Ga0302176_102002032	3300030057	Palsa	VLVGPGAPLRDRVRASTAVIAVGATCRFFLQQTDDRDKLRAIVLEIATDLTS
Ga0311353_108856351	3300030399	Palsa	LAHVRGRLDDLVDVLVGPAAPLRDRVRASTALIAVGATCRFFLQQADDRDKLRAIVLEIATDLTS
Ga0302183_102465901	3300030509	Palsa	RDRLDDLVDVLVGPAAPLRDRVRASTAVIAVGATCRFFLQQADDRDKLRAIVLEIATDLIPVDR
Ga0311354_118924182	3300030618	Palsa	AAPLRDRVRASTAVIAVGATCRFFLQQADDRDKLRAIVLEIATDLIPVDR
Ga0316363_102544261	3300030659	Peatlands Soil	SRLDTLVDLLAGLDAPLRDRVRATTAVLAVGATCHVYLQQVDDPDKLRALVLEIANDLVR
Ga0307482_12632531	3300030730	Hardwood Forest Soil	RFRGRLDALVDLLAGPDAPLRERVRATAATLTVGATCHVYLQKVDDPDKLRAIIGEIASDLIH
Ga0302325_116612041	3300031234	Palsa	DRLDDLVDVLVGPAAPLRDRVRASTAVIAVGATCRFFLQQSDDRDKLRAIVLEIATDLIPVDR
Ga0302325_118657641	3300031234	Palsa	SLVALLAGPDAPLRDRVRATAATLTVSAICHVYLTQVDDPDKLRAVILEIATDLIH
Ga0318534_101140091	3300031544	Soil	DTLVDLLAGPDAPLRDRVRATAAMLSVGATCHVYQQQVDDPDKLRAIVLEIANDLIR
Ga0318542_106927041	3300031668	Soil	MLVDLLAGPEAPLRERVRATTAVLAVGATCMIYLQQVDDRDKLRAIVLEIATDLIS
Ga0318574_107267741	3300031680	Soil	DTLVDLLAGPDAPLRDRVRASAALLSVGATCHVYLQQVEDPDKLRAIVLEMATDLIH
Ga0318572_100611672	3300031681	Soil	GRLDTLVDLLAGPDAPLRDRVRASAALLSVGATCHVYLQQVDDPDKLRAIVLEMATDLIH
Ga0310686_1103248961	3300031708	Soil	LDALVDLLAGPGAPLRERVRATAATLAVGATCHVYLQQVDDPDKLRAIILEIATDLIH
Ga0307476_111843601	3300031715	Hardwood Forest Soil	DLLAGPDAPLRERVRATAATLTVGATCHVYLQQVDDPDKLRAIILEIATDLIH
Ga0306918_113748131	3300031744	Soil	TLVDLLAGPDAPLRDRVRATAAMLSVGATCHVYQQQVDDPDKLRAIVLEIANDLIR
Ga0318494_103731192	3300031751	Soil	VRARLDALVDVLVGAEASLRDRVRAATAVLSVGATCMFFLQQVDDPDKLRAIVLELATDLVR
Ga0307475_103401132	3300031754	Hardwood Forest Soil	DALVDLLAGPDAPLRERVRASAAMLSVGATCHVYLQQVDDPDKLRAIIGEIASDLIH
Ga0318543_105729561	3300031777	Soil	VDLLAGAEAPLRQRMRATAAMLSVGATCHIYLQQVDDPDKLRAIVLELATDLVR
Ga0318547_107088102	3300031781	Soil	VLVGAEAPLRDRVRAATAVLSVGATCMFFLQQVDDPDKLRAIVLELATDLVR
Ga0318547_109893402	3300031781	Soil	VDLLAGPDAPLRDRVRASAAMLSVGATCHVYLQQIDDPDKLRAIVLEIATDLIH
Ga0318548_105285481	3300031793	Soil	VRARLDALVDVLVGAEAPLRDRVRAATAVLSVGATCMFFLQQVDDPDKLRAIVLELATDLVR
Ga0318576_103010442	3300031796	Soil	EALVDVLVGSEATLRDRVRATTAVLAVGTSCMFFLRQVDDPDKLRAIVLEMATDLIS
Ga0310917_106680511	3300031833	Soil	RLDTLVDLLAGAEAPLRDRMRATAAVLSVGATCHFYLQQVDDPDKLRAIVLEIATDLIS
Ga0318517_102005281	3300031835	Soil	LDTLVDLLAGAEAPLRDRMRATAAVLSVGATCHFYLQQVDDPDKLRAIVLEIATDLIS
Ga0310912_110591662	3300031941	Soil	ETLVDLLAGPDAPLRDRVRASAAMLSVGATCHVYLQQVDDPDKLRAIVLEIANDLVR
Ga0306922_109890482	3300032001	Soil	RGRLDTLVDLLAGPDAPLRDRVRASAAMLSVGATCHVYLQQIDDPDKLRAIVLEIATDLI
Ga0318524_102106703	3300032067	Soil	LVGAEAPLRDRVRATTAVLSVGVTCMFFLQQVDDRDKLRAIVLEMATDLIS
Ga0318518_105069951	3300032090	Soil	AGPGAPLRDRVRATAAMLSVGATCHVYLQQVDDPDKLRAITLEIATDLIH
Ga0311301_100742961	3300032160	Peatlands Soil	APLRDRVRATTAVLAVGATCVFYLQQVDDQDKLRAIVLEMATDLIPVDR
Ga0311301_108028743	3300032160	Peatlands Soil	RDRLDVLVDILAGPEAPLRDRVRATTATLAVGATCMFFLQQGDDQDKLRAIVLEIATDLT
Ga0311301_125166671	3300032160	Peatlands Soil	DAPLRDRVRATAAVLSVGATYMFYLQEVDDPEKLGAIILELATDLTH
Ga0306920_1009784271	3300032261	Soil	GAEAPLRDRVRATTALLSVGVTCMFFLQQVDDPDKLRAIVLELATDLVR
Ga0306920_1015436312	3300032261	Soil	ARFRGRLDTLVDLLAGPDAPLRDRVRASAALLSAGATCHVYLQQVDDPDKLRAVVLEIATDLIH
Ga0335085_104267852	3300032770	Soil	VGPDAPLRDRVRATTAVLSAGATCMFFLDQVDDRDKLRAIVLEMAADLTS
Ga0335078_103692711	3300032805	Soil	RVRVRLEGLVDVLVGADAPLRDRVRATTAVLSVGATCMFFLQEVDDRDKLRAIVLEMATDLIS
Ga0335080_114036601	3300032828	Soil	RFRDRLDALVDLLIGPQAQLRDRVRATAAVLTVGATCHFYLRQVDDPDKLRAIILEMATDLIS
Ga0310914_110034501	3300033289	Soil	RLDTLVDLLAGPDAPLRDRVRATAAMLSVGATCHVYQQQVDDPDKLRAIVLEIANDLIR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F053463

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences