Metagenome / Metatranscriptome Family F053447

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F053447
Family Type	Metagenome / Metatranscriptome
Number of Sequences	141
Average Sequence Length	60 residues
Representative Sequence	MAQRSSFAEMKAEQVRMTESWKAEGRLSEAWVVADPEIVEIFSAGVSFGLEMGRRGD
Number of Associated Samples	120
Number of Associated Scaffolds	141

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	100.00 %
% of genes near scaffold ends (potentially truncated)	95.74 %
% of genes from short scaffolds (< 2000 bps)	90.78 %
Associated GOLD sequencing projects	110
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.38

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (51.064 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (29.078 % of family members)
Environment Ontology (ENVO)	Unclassified (35.461 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (63.830 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 49.41% β-sheet: 0.00% Coil/Unstructured: 50.59%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.38
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.38
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 141 Family Scaffolds
PF01019	G_glu_transpept	3.55
PF07238	PilZ	2.13
PF05096	Glu_cyclase_2	2.13
PF00106	adh_short	1.42
PF14110	DUF4282	1.42
PF14534	DUF4440	1.42
PF02894	GFO_IDH_MocA_C	1.42
PF04264	YceI	0.71
PF00561	Abhydrolase_1	0.71
PF13840	ACT_7	0.71
PF03486	HI0933_like	0.71
PF00436	SSB	0.71
PF16499	Melibiase_2	0.71
PF01381	HTH_3	0.71
PF13358	DDE_3	0.71
PF07606	DUF1569	0.71
PF13683	rve_3	0.71
PF07883	Cupin_2	0.71
PF00487	FA_desaturase	0.71
PF07690	MFS_1	0.71
PF04366	Ysc84	0.71
PF13858	DUF4199	0.71
PF07366	SnoaL	0.71
PF13265	DUF4056	0.71
PF00072	Response_reg	0.71
PF14321	DUF4382	0.71
PF14257	DUF4349	0.71
PF13376	OmdA	0.71
PF04055	Radical_SAM	0.71
PF05299	Peptidase_M61	0.71
PF05598	DUF772	0.71
PF00903	Glyoxalase	0.71
PF01740	STAS	0.71
PF04454	Linocin_M18	0.71
PF12837	Fer4_6	0.71
PF07885	Ion_trans_2	0.71
PF14870	PSII_BNR	0.71
PF00135	COesterase	0.71
PF13302	Acetyltransf_3	0.71
PF00557	Peptidase_M24	0.71

COG ID	Name	Functional Category	% Frequency in 141 Family Scaffolds
COG0405	Gamma-glutamyltranspeptidase	Amino acid transport and metabolism [E]	3.55
COG3823	Glutamine cyclotransferase	Posttranslational modification, protein turnover, chaperones [O]	2.13
COG0493	NADPH-dependent glutamate synthase beta chain or related oxidoreductase	Amino acid transport and metabolism [E]	1.42
COG0654	2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases	Energy production and conversion [C]	1.42
COG0673	Predicted dehydrogenase	General function prediction only [R]	1.42
COG1398	Fatty-acid desaturase	Lipid transport and metabolism [I]	0.71
COG3975	Predicted metalloprotease, contains C-terminal PDZ domain	General function prediction only [R]	0.71
COG3634	Alkyl hydroperoxide reductase subunit AhpF	Defense mechanisms [V]	0.71
COG3239	Fatty acid desaturase	Lipid transport and metabolism [I]	0.71
COG2965	Primosomal replication protein N	Replication, recombination and repair [L]	0.71
COG2930	Lipid-binding SYLF domain, Ysc84/FYVE family	Lipid transport and metabolism [I]	0.71
COG2509	FAD-dependent dehydrogenase	General function prediction only [R]	0.71
COG2353	Polyisoprenoid-binding periplasmic protein YceI	General function prediction only [R]	0.71
COG2272	Carboxylesterase type B	Lipid transport and metabolism [I]	0.71
COG2081	Predicted flavoprotein YhiN	General function prediction only [R]	0.71
COG2072	Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD	Inorganic ion transport and metabolism [P]	0.71
COG0029	Aspartate oxidase	Coenzyme transport and metabolism [H]	0.71
COG1249	Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex or glutathione oxidoreductase	Energy production and conversion [C]	0.71
COG1053	Succinate dehydrogenase/fumarate reductase, flavoprotein subunit	Energy production and conversion [C]	0.71
COG0644	Dehydrogenase (flavoprotein)	Energy production and conversion [C]	0.71
COG0629	Single-stranded DNA-binding protein	Replication, recombination and repair [L]	0.71
COG0492	Thioredoxin reductase	Posttranslational modification, protein turnover, chaperones [O]	0.71
COG0446	NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase, or a related oxidoreductase	Lipid transport and metabolism [I]	0.71
COG0308	Aminopeptidase N, contains DUF3458 domain	Amino acid transport and metabolism [E]	0.71

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	51.06 %
Unclassified	root	N/A	48.94 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	51.06 %
Unclassified	root	N/A	48.94 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	51.06 %
Unclassified	root	N/A	48.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.94 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	30.50 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	1.42 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.42 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.71 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.94 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	12.77 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	2.84 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	1.42 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.71 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.71 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.71 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.94 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	12.77 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	2.13 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1.42 %
unclassified Planctomycetota	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota	0.71 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	0.71 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.71 %
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	0.71 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.94 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	12.77 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2.13 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.71 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.71 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.71 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.71 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.71 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.94 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	12.77 %
Candidatus Sulfopaludibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter	0.71 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.71 %
Edaphobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	0.71 %
Acidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	0.71 %
Sorangiineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae	0.71 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.71 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.71 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.94 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	12.77 %
Edaphobacter bradus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter bradus	0.71 %
unclassified Candidatus Sulfopaludibacter	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter	0.71 %
Polyangiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae	0.71 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.71 %
Acidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	0.71 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.71 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.71 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.94 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	12.77 %
Candidatus Sulfopaludibacter sp. SbA4	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	0.71 %
unclassified Polyangiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → unclassified Polyangiaceae	0.71 %
Edaphobacter bradus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter bradus	0.71 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.71 %
Acidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	0.71 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.71 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.71 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.94 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	12.77 %
Polyangiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → unclassified Polyangiaceae → Polyangiaceae bacterium	0.71 %
Candidatus Sulfopaludibacter sp. SbA4	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	0.71 %
Edaphobacter bradus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter bradus	0.71 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.71 %
Acidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	0.71 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.71 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.71 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.71 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000729\|JGI12371J11900_1013605	Not Available	543	Open in IMG/M
3300001471\|JGI12712J15308_10220739	Not Available	501	Open in IMG/M
3300003368\|JGI26340J50214_10168120	Not Available	546	Open in IMG/M
3300004080\|Ga0062385_10744279	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	636	Open in IMG/M
3300004082\|Ga0062384_100275100	All Organisms → cellular organisms → Bacteria	1033	Open in IMG/M
3300004091\|Ga0062387_100402988	All Organisms → cellular organisms → Bacteria → Acidobacteria	922	Open in IMG/M
3300004092\|Ga0062389_100454139	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1417	Open in IMG/M
3300004479\|Ga0062595_102557293	Not Available	510	Open in IMG/M
3300004633\|Ga0066395_10372591	All Organisms → cellular organisms → Bacteria	798	Open in IMG/M
3300005332\|Ga0066388_102120793	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1012	Open in IMG/M
3300005332\|Ga0066388_102756818	Not Available	897	Open in IMG/M
3300005332\|Ga0066388_105601057	Not Available	636	Open in IMG/M
3300005332\|Ga0066388_108217683	Not Available	521	Open in IMG/M
3300005347\|Ga0070668_101201671	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	687	Open in IMG/M
3300005591\|Ga0070761_10350921	Not Available	894	Open in IMG/M
3300005764\|Ga0066903_107408241	Not Available	567	Open in IMG/M
3300005842\|Ga0068858_100183540	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1976	Open in IMG/M
3300005921\|Ga0070766_10373085	All Organisms → cellular organisms → Bacteria	930	Open in IMG/M
3300005950\|Ga0066787_10163856	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → unclassified Polyangiaceae → Polyangiaceae bacterium	510	Open in IMG/M
3300005995\|Ga0066790_10157727	All Organisms → cellular organisms → Bacteria	971	Open in IMG/M
3300006059\|Ga0075017_101040686	All Organisms → cellular organisms → Bacteria → Acidobacteria	638	Open in IMG/M
3300006175\|Ga0070712_100618350	All Organisms → cellular organisms → Bacteria → Acidobacteria	918	Open in IMG/M
3300006176\|Ga0070765_100928311	All Organisms → cellular organisms → Bacteria → Acidobacteria	823	Open in IMG/M
3300006354\|Ga0075021_10174431	Not Available	1306	Open in IMG/M
3300009101\|Ga0105247_10661030	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	782	Open in IMG/M
3300010360\|Ga0126372_10025959	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3572	Open in IMG/M
3300010361\|Ga0126378_11426624	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter bradus	784	Open in IMG/M
3300010366\|Ga0126379_10060549	All Organisms → cellular organisms → Bacteria	3172	Open in IMG/M
3300010379\|Ga0136449_101828553	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	907	Open in IMG/M
3300010396\|Ga0134126_11569370	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	724	Open in IMG/M
3300012202\|Ga0137363_10461406	Not Available	1064	Open in IMG/M
3300012929\|Ga0137404_11766769	Not Available	575	Open in IMG/M
3300012930\|Ga0137407_10016041	All Organisms → cellular organisms → Bacteria → Acidobacteria	5475	Open in IMG/M
3300012930\|Ga0137407_12309637	All Organisms → cellular organisms → Bacteria → Acidobacteria	514	Open in IMG/M
3300012944\|Ga0137410_10609915	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	902	Open in IMG/M
3300012971\|Ga0126369_10562037	All Organisms → cellular organisms → Bacteria → Acidobacteria	1207	Open in IMG/M
3300015054\|Ga0137420_1383645	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1653	Open in IMG/M
3300015264\|Ga0137403_11162768	Not Available	617	Open in IMG/M
3300016270\|Ga0182036_11141071	All Organisms → cellular organisms → Bacteria → Acidobacteria	646	Open in IMG/M
3300016341\|Ga0182035_10716144	All Organisms → cellular organisms → Bacteria → Acidobacteria	873	Open in IMG/M
3300016357\|Ga0182032_11432037	Not Available	599	Open in IMG/M
3300016750\|Ga0181505_11009929	All Organisms → cellular organisms → Bacteria	879	Open in IMG/M
3300017928\|Ga0187806_1317922	Not Available	552	Open in IMG/M
3300017947\|Ga0187785_10629195	Not Available	555	Open in IMG/M
3300017959\|Ga0187779_10021872	All Organisms → cellular organisms → Bacteria	3647	Open in IMG/M
3300017974\|Ga0187777_10214667	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1299	Open in IMG/M
3300017995\|Ga0187816_10565364	Not Available	512	Open in IMG/M
3300018058\|Ga0187766_10645981	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	726	Open in IMG/M
3300018062\|Ga0187784_10938786	Not Available	688	Open in IMG/M
3300020579\|Ga0210407_10831218	Not Available	711	Open in IMG/M
3300020579\|Ga0210407_11160692	Not Available	583	Open in IMG/M
3300020579\|Ga0210407_11377501	Not Available	524	Open in IMG/M
3300020580\|Ga0210403_10942133	All Organisms → cellular organisms → Bacteria → Acidobacteria	679	Open in IMG/M
3300020581\|Ga0210399_10048354	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3416	Open in IMG/M
3300020581\|Ga0210399_11281779	Not Available	578	Open in IMG/M
3300020583\|Ga0210401_10404324	All Organisms → cellular organisms → Bacteria	1228	Open in IMG/M
3300020583\|Ga0210401_10554838	Not Available	1011	Open in IMG/M
3300020583\|Ga0210401_11118199	Not Available	646	Open in IMG/M
3300021088\|Ga0210404_10639997	Not Available	605	Open in IMG/M
3300021171\|Ga0210405_10047431	All Organisms → cellular organisms → Bacteria → Acidobacteria	3405	Open in IMG/M
3300021180\|Ga0210396_10738827	All Organisms → cellular organisms → Bacteria → Acidobacteria	848	Open in IMG/M
3300021180\|Ga0210396_11229012	Not Available	626	Open in IMG/M
3300021406\|Ga0210386_10585385	Not Available	964	Open in IMG/M
3300021406\|Ga0210386_11120440	All Organisms → cellular organisms → Bacteria → Acidobacteria	668	Open in IMG/M
3300021407\|Ga0210383_10877771	Not Available	765	Open in IMG/M
3300021420\|Ga0210394_10121106	All Organisms → cellular organisms → Bacteria	2266	Open in IMG/M
3300021420\|Ga0210394_11112537	Not Available	681	Open in IMG/M
3300021420\|Ga0210394_11325303	Not Available	614	Open in IMG/M
3300021474\|Ga0210390_10166195	All Organisms → cellular organisms → Bacteria → Acidobacteria	1862	Open in IMG/M
3300021474\|Ga0210390_10671463	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	865	Open in IMG/M
3300021474\|Ga0210390_11216136	Not Available	608	Open in IMG/M
3300021478\|Ga0210402_11732253	Not Available	551	Open in IMG/M
3300021479\|Ga0210410_10964492	Not Available	741	Open in IMG/M
3300021559\|Ga0210409_10104724	All Organisms → cellular organisms → Bacteria	2607	Open in IMG/M
3300021560\|Ga0126371_12111548	Not Available	679	Open in IMG/M
3300021560\|Ga0126371_12566534	Not Available	617	Open in IMG/M
3300025923\|Ga0207681_11602452	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	545	Open in IMG/M
3300025972\|Ga0207668_11784166	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	555	Open in IMG/M
3300026023\|Ga0207677_11713956	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	583	Open in IMG/M
3300026217\|Ga0209871_1070132	Not Available	674	Open in IMG/M
3300026294\|Ga0209839_10117900	All Organisms → cellular organisms → Bacteria	896	Open in IMG/M
3300026446\|Ga0257178_1049099	Not Available	549	Open in IMG/M
3300026557\|Ga0179587_11081243	Not Available	528	Open in IMG/M
3300026862\|Ga0207724_1011370	Not Available	811	Open in IMG/M
3300026871\|Ga0207825_116109	Not Available	502	Open in IMG/M
3300026910\|Ga0207840_1008543	All Organisms → cellular organisms → Bacteria	1110	Open in IMG/M
3300026942\|Ga0207783_1031732	All Organisms → cellular organisms → Bacteria	522	Open in IMG/M
3300026959\|Ga0207852_1032357	Not Available	534	Open in IMG/M
3300026979\|Ga0207817_1009206	All Organisms → cellular organisms → Bacteria	1143	Open in IMG/M
3300027049\|Ga0207806_1036056	Not Available	565	Open in IMG/M
3300027090\|Ga0208604_1002360	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	1768	Open in IMG/M
3300027117\|Ga0209732_1054474	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	695	Open in IMG/M
3300027729\|Ga0209248_10182643	All Organisms → cellular organisms → Bacteria	621	Open in IMG/M
3300027767\|Ga0209655_10278468	Not Available	542	Open in IMG/M
3300027783\|Ga0209448_10109845	All Organisms → cellular organisms → Bacteria → Acidobacteria	924	Open in IMG/M
3300027855\|Ga0209693_10320506	All Organisms → cellular organisms → Bacteria	754	Open in IMG/M
3300027889\|Ga0209380_10699960	Not Available	581	Open in IMG/M
3300027895\|Ga0209624_10224341	All Organisms → cellular organisms → Bacteria	1249	Open in IMG/M
3300027911\|Ga0209698_10338319	All Organisms → cellular organisms → Bacteria	1185	Open in IMG/M
3300027915\|Ga0209069_10522163	All Organisms → cellular organisms → Bacteria → Acidobacteria	672	Open in IMG/M
3300028016\|Ga0265354_1023961	Not Available	583	Open in IMG/M
3300029636\|Ga0222749_10267153	Not Available	875	Open in IMG/M
3300031057\|Ga0170834_111435916	Not Available	1497	Open in IMG/M
3300031090\|Ga0265760_10151034	Not Available	762	Open in IMG/M
3300031128\|Ga0170823_13165206	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	886	Open in IMG/M
3300031543\|Ga0318516_10880653	Not Available	504	Open in IMG/M
3300031561\|Ga0318528_10548045	Not Available	621	Open in IMG/M
3300031573\|Ga0310915_10382607	All Organisms → cellular organisms → Bacteria → Acidobacteria	999	Open in IMG/M
3300031708\|Ga0310686_117783146	All Organisms → cellular organisms → Bacteria → Acidobacteria	749	Open in IMG/M
3300031715\|Ga0307476_10033792	All Organisms → cellular organisms → Bacteria	3415	Open in IMG/M
3300031719\|Ga0306917_11359976	Not Available	548	Open in IMG/M
3300031724\|Ga0318500_10210264	Not Available	934	Open in IMG/M
3300031768\|Ga0318509_10796605	Not Available	523	Open in IMG/M
3300031797\|Ga0318550_10582926	All Organisms → cellular organisms → Bacteria	538	Open in IMG/M
3300031879\|Ga0306919_10820016	Not Available	715	Open in IMG/M
3300031890\|Ga0306925_10392876	All Organisms → cellular organisms → Bacteria → Acidobacteria	1487	Open in IMG/M
3300031890\|Ga0306925_10783188	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	991	Open in IMG/M
3300031897\|Ga0318520_10484625	Not Available	762	Open in IMG/M
3300031910\|Ga0306923_10591002	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1247	Open in IMG/M
3300031910\|Ga0306923_10725010	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1105	Open in IMG/M
3300031910\|Ga0306923_11085426	Not Available	863	Open in IMG/M
3300031941\|Ga0310912_10660628	Not Available	811	Open in IMG/M
3300031945\|Ga0310913_10748471	All Organisms → cellular organisms → Bacteria → Acidobacteria	690	Open in IMG/M
3300031946\|Ga0310910_10572082	All Organisms → cellular organisms → Bacteria → Acidobacteria	896	Open in IMG/M
3300031946\|Ga0310910_11181147	All Organisms → cellular organisms → Bacteria	594	Open in IMG/M
3300031962\|Ga0307479_10464679	Not Available	1249	Open in IMG/M
3300031962\|Ga0307479_11602886	Not Available	606	Open in IMG/M
3300032001\|Ga0306922_12000302	Not Available	564	Open in IMG/M
3300032035\|Ga0310911_10423046	Not Available	771	Open in IMG/M
3300032059\|Ga0318533_10439646	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	954	Open in IMG/M
3300032064\|Ga0318510_10185491	Not Available	835	Open in IMG/M
3300032205\|Ga0307472_102320543	All Organisms → cellular organisms → Bacteria	543	Open in IMG/M
3300032261\|Ga0306920_103858685	Not Available	547	Open in IMG/M
3300032805\|Ga0335078_11389024	Not Available	794	Open in IMG/M
3300032829\|Ga0335070_10337542	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	1452	Open in IMG/M
3300032892\|Ga0335081_11385784	All Organisms → cellular organisms → Bacteria	787	Open in IMG/M
3300032955\|Ga0335076_11200384	Not Available	642	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	94.33%
Host-Associated	Host-Associated	5.67%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	82.98%
Aquatic	Environmental → Aquatic	11.35%
Plants	Host-Associated → Plants	5.67%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	82.98%
Freshwater	Environmental → Aquatic → Freshwater	7.80%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.26%
Sediment	Environmental → Aquatic → Sediment	3.55%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.42%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	56.74%
Loam	Environmental → Terrestrial → Soil → Loam	17.02%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	9.22%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	7.80%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.55%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.84%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.42%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.42%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	41.84%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	16.31%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	13.48%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	6.38%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	6.38%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.55%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	2.84%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.84%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.42%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.42%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.42%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.71%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.71%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.71%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	29.08%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	9.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	8.51%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.38%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	5.67%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.26%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	3.55%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.55%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.55%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.84%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.84%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.84%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	2.13%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.13%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.42%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.42%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.71%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.71%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.71%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.71%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	0.71%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.71%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.71%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.71%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.71%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.71%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.71%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000729	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 35	Environmental	Open in IMG/M
3300001471	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2	Environmental	Open in IMG/M
3300003368	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300005950	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-047	Environmental	Open in IMG/M
3300005995	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016750	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017928	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1	Environmental	Open in IMG/M
3300017947	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026217	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-045 (SPAdes)	Environmental	Open in IMG/M
3300026294	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050 (SPAdes)	Environmental	Open in IMG/M
3300026446	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-11-B	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300026862	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 31 (SPAdes)	Environmental	Open in IMG/M
3300026871	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 78 (SPAdes)	Environmental	Open in IMG/M
3300026910	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 65 (SPAdes)	Environmental	Open in IMG/M
3300026942	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 63 (SPAdes)	Environmental	Open in IMG/M
3300026959	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 3 (SPAdes)	Environmental	Open in IMG/M
3300026979	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 13 (SPAdes)	Environmental	Open in IMG/M
3300027049	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 72 (SPAdes)	Environmental	Open in IMG/M
3300027090	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF016 (SPAdes)	Environmental	Open in IMG/M
3300027117	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027729	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027767	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027783	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300027915	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)	Environmental	Open in IMG/M
3300028016	Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1	Host-Associated	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031090	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12371J11900_10136052	3300000729	Tropical Forest Soil	MAKRSSFVEMKAEQDRLTQSWRAEGRLSEAWVVADPEIVEIFSAGVSFGQETARRGDGSFSQDEWRKAL
JGI12712J15308_102207391	3300001471	Forest Soil	MAQRTSFSAIKTEQAKLAKSWKSQGRQSEAWVIADPEIVEIFSAGVAFGLEAGRRGRNDPAYSPDE
JGI26340J50214_101681202	3300003368	Bog Forest Soil	MKAEQARMTQSWKAEGRLSEAWAVADPEIVEIFSAGVAFGMEVGRRGRSD
Ga0062385_107442791	3300004080	Bog Forest Soil	MAERNSFSDTKTEQQKMTESWKAEGRLSEAWVIADPEIVEIFTAGVAFGVQAGRSSSSDPAYSP
Ga0062384_1002751001	3300004082	Bog Forest Soil	MAQRTSFAEMRAAQAKMTESWKAEGRLSEAWVVADAEIVEIFSAGVAFGIEVGRRGRG
Ga0062387_1004029882	3300004091	Bog Forest Soil	MAQRNSFADMKAEQDRLTESWKAEGRLSEAWAVADPEIVEIFSAGVAFGVEMGRRSRQDP
Ga0062389_1004541393	3300004092	Bog Forest Soil	MAQRSSFAEMKAEQARMTESWKAEGRTSEAWAVADPEIVEIFTAGVVFGVKAGRRNRRDPAYTPDEWRRALREAME
Ga0062595_1025572931	3300004479	Soil	MVRRRSFVEMQAEQAKMTENWKAEGRLSEAWVVADPEIVELFSAGVAFGVEVGRRGRNDPAYSPDEWRRALREAVE
Ga0066395_103725911	3300004633	Tropical Forest Soil	MARRTSFSEMKAEQARLTQSWKTEGRLSEAWVVADPEIVEIFSAGVSFGLEVGRRGDAGY
Ga0066388_1021207933	3300005332	Tropical Forest Soil	MPQRNSFAEIKAEQARLTESWKAEGRMSEAWTVADPEIVEIFSAGVAFGLSVGRRNPPDPAYTQDEWRKALR
Ga0066388_1027568183	3300005332	Tropical Forest Soil	MGQRSSFAAMKAEQARMTESWKAEGRQSEAWVIADPEIVEIFAAGVSF
Ga0066388_1056010571	3300005332	Tropical Forest Soil	MARRNSFGEMKAEQVRMTESWKAEGRLSEAWVVADPEIVEIFSAGVSFGMNVARRGDATYSQDE
Ga0066388_1082176831	3300005332	Tropical Forest Soil	MAQRSSFADMKAEQGRMTENWKADGRQSEAWVVADPEIVEVFSAGVAFGLEM
Ga0070668_1012016711	3300005347	Switchgrass Rhizosphere	MVQRSSFAEIKAEQARMTESWKAEGRTSEAWAVADPEIVAIFTAGVVFGVKVGRRNRRDPAYTPD
Ga0070761_103509211	3300005591	Soil	MAVRNRFSEIRTEQAKMAESWKAEGRLSEAWVIADPEIVEIFSAGVAFGVEAGRRGRSDPAYSPDEWRRALR
Ga0066903_1074082411	3300005764	Tropical Forest Soil	MARRTSFSEMKAEQARLTQSWKTEGRLSEAWVVADPEIVEIFSAGVSFGLEVG
Ga0068858_1001835404	3300005842	Switchgrass Rhizosphere	MAQRSSFAETKAEQARMTESWKAEGRTSEAWAVADPEIVEIFTAGVVFGVKAGRRNRRDPAYTPD
Ga0070766_103730853	3300005921	Soil	MTVRNRFSEIKTEQAKMAESWKAEGRLSEAWVIADPEIVEIFSAGVAFGVEAGRRGRSDPAYSPDE
Ga0066787_101638562	3300005950	Soil	MARKSTFAEMKAEQARMTESWKAEGRLSEAWVVADPEIVELFTAGVAFGVEA
Ga0066790_101577272	3300005995	Soil	MADRTSFSDAKTEQAKMSESWKAEGRLSEAWVIADPEIVEIFSAGVAFGVEAGRRDHSDPAYSPD
Ga0075017_1010406861	3300006059	Watersheds	MPHRSSFSEMKAEQARMTESWKAEGRLSEAWVVADPEIVEIFSAGVAFGMEVGRRGRSDPAYSPDEWRRALRE
Ga0070712_1006183501	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MAQRSSFAEIRAEQARMTKSWKAEGRTSEAWAVADPEIVEIFTAGVMFGVR
Ga0070765_1009283112	3300006176	Soil	MAQRHSFAEMKSEQAKMTASWKAEGRLSEAWVIADPEIVEIFSAGVAFGVEAGRRG
Ga0075021_101744311	3300006354	Watersheds	MAHRSSFADIKAEQARMTASWKAEGRTSEAWAVADPEIVEIFTAGVAFGVKAGRRSQREPAYT
Ga0105247_106610301	3300009101	Switchgrass Rhizosphere	MAQRSSFAETKAEQARMTESWKAEGRTSEAWAVADPEIVEIFTAGVVFGVKAG
Ga0126372_100259591	3300010360	Tropical Forest Soil	MPQRNSFAEIKAEQARLTESWKAEGRMSEAWTVADPEIVEIFTAGVAFGVKAGRR
Ga0126378_114266242	3300010361	Tropical Forest Soil	MARRLSFAEMMAEQARMTESWKAEGRLSEAWVIADPEIVEIFSAGVSFGLEMGRRGQATYSQDEWRRALREAVE
Ga0126379_100605491	3300010366	Tropical Forest Soil	MGQRSSFAAMKAEQARMTERWKAEGRQSEAWVIADPEIVEIFAAGVSFGMEMGRRRDGAY
Ga0136449_1018285531	3300010379	Peatlands Soil	MADRRSFSEFKTEQAKMTESWKAEGRLSEAWVIADPEIVEIFSAGVAFGIEAGRRGGSDPAYSPDEWRR
Ga0134126_115693701	3300010396	Terrestrial Soil	MAQRSSFAETKAEQARMTESWKAEGRTSEAWAVADPEIVEIFTAGVVFGVKAGRRN
Ga0137363_104614062	3300012202	Vadose Zone Soil	MAQRISFAEMTAEQAKMTESWRAEGRLSEAWVVADPEIVEIFSAGVAFGVEVGRRGRSHPGYSPDEWRRALREA
Ga0137419_101924744	3300012925	Vadose Zone Soil	MAQRSSFAEMKAEQARMTASWKAEGRTSEAWAVVDPEIVEIFSAGVT
Ga0137404_117667691	3300012929	Vadose Zone Soil	MAQRSTFAVTKAEQARMTESWKAEGRTSEAWTVADPEIVEIFAAGVVFGVK
Ga0137407_100160414	3300012930	Vadose Zone Soil	MAQRSSFAEMKAEQARMTASWKAEGRTSEAWAIADPEIVEIFSAGVVFGIDAGRHNLRDPAYTPDE*
Ga0137407_123096371	3300012930	Vadose Zone Soil	MKAEQAKMTASWKAEGRLSEAWVVADPEISEIFSAGVAFGIEMGRH
Ga0137410_106099152	3300012944	Vadose Zone Soil	MAQRSSFAEMKAEQARMTASWKAEGRTSEAWAIADAEIVEIFSAGVVFGIDAGRRNRRDPAYTPDEWRKALREAVE
Ga0126369_105620371	3300012971	Tropical Forest Soil	MGQRSSFAAMKAEQARMTESWKAEGRQSEAWVIADPEIVEIFAAGVSFGMEMGRRRDGAYTQ
Ga0157372_107245621	3300013307	Corn Rhizosphere	MMQRSSFAEIKAEQARMTESWKAEGRTSEAWAVADPEIVAIFTAGVV
Ga0137420_13836452	3300015054	Vadose Zone Soil	MAQRSSFAEMRAEQARMTASWKAEGRTSEAWAVVDPEIVEIFSAGVAFGVEAGRRNRRDPAYTPE*
Ga0137403_111627682	3300015264	Vadose Zone Soil	MAQRSTFAVTKAEQARMTESWKAEGRTSEAWTVADPEIVEIFAAGVVFGVKAGRHNHRDPAYTPD
Ga0182036_111410712	3300016270	Soil	MAQRSSFAEMKAEQVRMTESWKAEGRLSEAWVVADPEIVEIFSAGVSFGLEMGRRGD
Ga0182035_107161441	3300016341	Soil	MAQRSSFAEMKAEQVRMTESWKAEGRLSEAWVVADPEIVEIFSAGVSFG
Ga0182032_114320371	3300016357	Soil	MARRTSFAEMKAEQARMTESWKAEGRLSEAWVIADPEIVEIFSAGVSFGLEMGRRGDATYSQDEWRRALREA
Ga0181505_110099291	3300016750	Peatland	MAPRSSFAEMKAEQDRFTQSWKAEGRLSEAWAVADPEIVEIFSAGVAFGV
Ga0187806_13179221	3300017928	Freshwater Sediment	MKHRSSFAEMKAEQQRMTESWKAEGRQSEAWTVADPEIVEIFSAGIAFGLKVARRKDRDPLYSPNEWRKA
Ga0187785_106291951	3300017947	Tropical Peatland	MSRRNSFAEMKAEQARMTESWKGEGRLSEAWVVADPEIVEIFSAGVSFGLEIGRSGHATYSQDEWRKALREAVER
Ga0187779_100218721	3300017959	Tropical Peatland	MSPRSSFADMKAEQARMTESWKSEGRQSEAWAVADPEIVEVFDAGIAFG
Ga0187777_102146672	3300017974	Tropical Peatland	MAQRSSFADMKAEQQRMTASWKAEGRQSEAWTVADPEVVEIFTAGIVFGMKVARRKDRDPLYSPNEWRKA
Ga0187816_105653641	3300017995	Freshwater Sediment	MKHRSSFAEMKAEQQRMTESWKAEGRQSEAWTVANPEIVEIFSAGIAFGLKVARRKDRDPLYSPNEWRKALRE
Ga0187766_106459811	3300018058	Tropical Peatland	MAQRSSFADMKAEQQRMTASWKAEGRQSEAWTVADPEVVEIFTAGIVFGMKVARRKD
Ga0187784_109387861	3300018062	Tropical Peatland	MIQKNSFSEMKAEQARMTESWKAEGRLSEAWVVADPEIVEIFSAGVSFGLEAARRGEASYSQDEWRKALREAV
Ga0210407_108312181	3300020579	Soil	MAQRSSFAETKAEQARMTESWKAEGRTSEAWAVADPEIVEIFTAGVAFGVKAGRRSRRDPAYTPDEW
Ga0210407_111606922	3300020579	Soil	MAHRSSFAEMKAEQAKMTASWKAEGRLSEAWVVADPEIVEIFSAGVEFGR
Ga0210407_113775011	3300020579	Soil	MVRRRSFVEMQAEQAKMTENWKAEGRLSEAWVVADPEIVELFSAGVAFGVEVGRRGRDDPAYSPDEWR
Ga0210403_109421332	3300020580	Soil	MAQRHSFAEMKSEQAKMTASWKAEGRLSEAWVIADPEIVEIFSAGVAFGVEAGRRGR
Ga0210399_100483541	3300020581	Soil	MAQRSSFAEMKAEQAKMTASWKAEGRLSEAWVVADPEIVEIFSAGATFGMEVGRRGSGEPAYSPDEWRR
Ga0210399_112817792	3300020581	Soil	MVRRRSFVEIQAEQVKMTESWKAEGRLSEAWVVADPEIVELFSAGVAFGVEVGRSGRTDP
Ga0210401_104043241	3300020583	Soil	MTESWKAEGRTTEAWAVADPEIVEIFSAGVAFGIKAGRRSRRDPGYTPD
Ga0210401_105548382	3300020583	Soil	MAHRSSFAEMKAEQAKMTASWKAEGRLSEAWVVADPEIVEIFSAGVEFGREVGRRGRSEPAYSPDEWRKALR
Ga0210401_111181992	3300020583	Soil	MNRRSSFAEMKAEQQRMTESWKAEGRQSEAWAVADPEVVEIFSAGIAFGLKVARRKGERDPLYSPDEWRKAL
Ga0210404_106399971	3300021088	Soil	MAQRSSFAEIRAEQARMTKSWKAEGRTSEAWAVADPEIVEIFTAGVMFGVRAGRRG
Ga0210405_100474314	3300021171	Soil	MVRRRSFVEMQAEQAKMTESWKAEGRLSEAWVIADPEIVELFSAGVAFGMEVGRR
Ga0210396_107388271	3300021180	Soil	MAKRSSFAEMKAEQAKMTASWKAEGRLSEAWVVADPEIVEIFSAGAAFGMEVGRRGRTDPAYSPDEWRKALRE
Ga0210396_112290121	3300021180	Soil	MAQRSSFAEMKAEQARMTASWKAEGRLSEAWVVADPEIVEIFSAGVTFGMEV
Ga0210386_105853851	3300021406	Soil	MVRRRSFVEMQAEQAKMTESWKAEGRLSEAWVVADPEIVELFSAGVAFG
Ga0210386_111204401	3300021406	Soil	MGQRNSFAEMKAEQAKMTASWKAEGRLSEAWVVADPEIVEIFSAGVAFGMEVG
Ga0210383_108777711	3300021407	Soil	MAVRNKFSDVKTEQAKLAESWKSEGRQSEAWVIADPEIVEIFSAGVAF
Ga0210394_101211061	3300021420	Soil	MAQRSSFAEMKAEQAKMTASWKAEGRLSEAWVVADPEIVETFSAGVAFGMEVGRRGRTDPAY
Ga0210394_111125371	3300021420	Soil	MAVRNRFSEIKTEQAKMAESWKAEGRLSEAWVIADPEIVEIFSAGVAFG
Ga0210394_113253031	3300021420	Soil	MTDRRSFSEMKTEQARMTESWKAEGRLSEAWVIADPEIVEIFSAGVSFGIE
Ga0210390_101661951	3300021474	Soil	MAHRSSFAEMKAEQAKMTASWKAEGRLSEAWVVADPEIVEIFSAGVAFGMEVGRRG
Ga0210390_106714631	3300021474	Soil	MAQRRSFAETKAEQARMTQSWKAEGRTSEAWAVADLEIVEIFTAGVVFGLKAGRRNRPDPAYTP
Ga0210390_112161361	3300021474	Soil	MNRRSSFAEMKAEQQRMTESWKAEGRQSEAWAVADPEIVEIFSAGIAFGLKVARRK
Ga0210402_117322532	3300021478	Soil	MAQRNSFAEMRAEQAKVTESWKAEGRQSEAWVIADPEIVEIFSAGVAFGIEVGQRGRGDLAYSPDE
Ga0210410_109644922	3300021479	Soil	MAVRNRFSEIKTEQAKMAESWKAEGRLSEAWVIADPEIVEIFSAGVAFGVEAGRRGRSDPAYSP
Ga0210409_101047245	3300021559	Soil	MAQRSSFAGMKAEQARMTAAWKAEGRLSEAWVVADPEIVEIFSAGVAFGMEVGRRGRSDPAYSPDEWRKAF
Ga0126371_121115481	3300021560	Tropical Forest Soil	MAQRSSFAEMKAEQARMTESWKAEGRLSEAWVVADPEIVEIFSAGVSFGVEMGRRGDGYYSQDEWRRALREAVER
Ga0126371_125665341	3300021560	Tropical Forest Soil	MAQRSSFADMKAEQARMTEDWKADGRQSEAWVVADPEIVEVFSAGVAFGLEMGRRGHNDPAYSPDEWRRAFR
Ga0207681_116024521	3300025923	Switchgrass Rhizosphere	MAQRSSFAETKAEQARMTESWKAEGRTSEAWAVADPEIVEIFTAGVVFGVKAGRRNRRDPAYTPDEWRRALREAMER
Ga0207701_105515412	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MAQRSSFAETKAEQARMTESWKAEGRTSEAWAVADPEIVEIFTAGV
Ga0207668_117841662	3300025972	Switchgrass Rhizosphere	MVQRSSFAEIKAEQARMTESWKAEGRTSEAWAVADPEIVEIFTAGVVFGVKAGRRNRRDPAYTPDEWRRALREAM
Ga0207677_117139562	3300026023	Miscanthus Rhizosphere	MMQRSSFAEIKAEQARMTESWKAEGRTSEAWAVADPEIVAIFTAGVVFGVKVGRRNR
Ga0209871_10701321	3300026217	Permafrost Soil	MAQRRSFAEIKAEQARMTESWKAEGRTSEAWAVADPEVVEIFAAGVVFGLKSGRSNR
Ga0209839_101179001	3300026294	Soil	MADRTSFSDAKTEQAKMSESWKAEGRLSEAWVIADPEIVEIFSAGVAFGVEAGRRDHSDPAYSPDEWR
Ga0257178_10490992	3300026446	Soil	MAKRSTFAEMKAEQAKMTASWKAEGRLSEAWVVADPEIVEIFSAGIAFGMEVGRRVRTDPAYSPDE
Ga0179587_110812431	3300026557	Vadose Zone Soil	MGQRSSFAEMKAEQAKMTASWKAEGRLSAAWVVADPEIVEIFSAGVAFGMEVGRRGRS
Ga0207724_10113701	3300026862	Tropical Forest Soil	MAQRSSFAEMKAEQARMTQSWKAEGRLSEAWVVADPEIVEIFSAGVSFGLEM
Ga0207825_1161092	3300026871	Tropical Forest Soil	MAQRSSFAEMKAEQARMTQSWKAEGRLSEAWVVADPEIVEIFSAGVSFGLEMGRRGDASY
Ga0207840_10085431	3300026910	Tropical Forest Soil	MAQRSSFAEMKAEQARMTQSWKAEGRLSEAWVVADPEIVEIFSAGVSFGLEMGRRGDASYSQD
Ga0207783_10317321	3300026942	Tropical Forest Soil	MAQRSSFAEMKAEQARMTQSWKAEGRLSEAWVVADPEIVEIFSAGVSFGLEMGRRGDASYSQDEWRRALREAV
Ga0207852_10323572	3300026959	Tropical Forest Soil	MAKRSSFVEMKAEQDRLTQSWRAEGRLSEAWVVADPEIVEIFSAGVSFGQETARRGDGS
Ga0207817_10092061	3300026979	Tropical Forest Soil	MAQRSSFAEMKAEQARMTQSWKAEGRLSEAWVVADPEIVEIFSAGVSF
Ga0207806_10360562	3300027049	Tropical Forest Soil	MAQRSSFAEMKAEQARMTQSWKAEGRLSEAWVVADPEIVEIFSAGVSFGLEMGR
Ga0208604_10023603	3300027090	Forest Soil	MVRRRSFVEMQAEQAKMTESWKAEGRLSEAWVVADPEIVELFSAGVAFGMEVGRRGRSDPAYSPDEWRRALREA
Ga0209732_10544742	3300027117	Forest Soil	MFHRISFSETKTEQRKLTESWKAEGRTSEAWVIADPEIVEIFSAGVAFGIEVGRRGQ
Ga0209248_101826431	3300027729	Bog Forest Soil	MSRRSSFAEIKAEQAKMTASWKADGRLSEAWVVADPEIVEIFSAGVAFGIE
Ga0209655_102784681	3300027767	Bog Forest Soil	MANRNSFSDMKNEQAKLTESWKAEGRLSEAWVIADPEIVEIFSAGVAFGM
Ga0209448_101098451	3300027783	Bog Forest Soil	MAQRNSFADMKAEQDRLTESWKAEGRLSEAWAVADPEIVEIFSAGVAFGVEMGRRSRQDPAY
Ga0209693_103205062	3300027855	Soil	MAQRSSFAEMKAEQAKMTASWKAEGRLSEAWVVADPEIVEIFSAGATFGMEVGRRGSGEP
Ga0209380_106999601	3300027889	Soil	MVDRRSFSEIKAEQARMTASWKAEGRLSEAWVIADPEIVEIFSAGVAFGIEMGRRSGSDPAYSPDEWRRT
Ga0209624_102243411	3300027895	Forest Soil	MVHRNSFSETKTEQRKLSQSWKSEGRVSEAWVIADPEIVEIFSAGVAFGIQVGRRGQG
Ga0209067_106440461	3300027898	Watersheds	MTHRSKFADLQAEQAKITADWKAQGRLSEPWALADAEIVEIFSAGVAFGLTAG
Ga0209698_103383191	3300027911	Watersheds	MGQRHSFAEMLVEQRKLTASWKAEGRQSEAWVVADPEIVEIFSAGVAFGLEAGRRGHD
Ga0209069_105221631	3300027915	Watersheds	MAQRSSFAEMRAEQARMTASWRAEGRASEAWAVVDPEIVEIFSAGVAFGIEAGRRARRDPSY
Ga0265354_10239611	3300028016	Rhizosphere	MAHRTSFSAIKTEQAKLAKSWKAEGRQSEAWVIADPEIVEIFSAGVAFGLEAGRRG
Ga0222749_102671531	3300029636	Soil	MAQRSSFAEMKAEQARMTASWKAEGRLSEAWVVADPEIVEIFSAGVTFGMEVGRRGRSE
Ga0170834_1114359163	3300031057	Forest Soil	MTDRRSFSEMKAEQARMTESWKAEGRLSEAWVIADPEIVEIFSAGVSFGIE
Ga0265760_101510342	3300031090	Soil	MIRRRSFVEMKSEQAKMTASWKAEGRLCEAWVVADPEIVGIFSAGVAFGMEVGRRGRSDPAYSPDEWRKALREAV
Ga0170823_131652061	3300031128	Forest Soil	MARRSSFAEMKAEQAKMTESWKAEGRLSEAWVVADPEIIEIFSAGVSFGLER
Ga0318516_108806531	3300031543	Soil	MAQRSSFAEMKAEQARMTESWKAEGRLSEAWVVADPEIVEIFSAGVSFGLEMGRRRDASY
Ga0318528_105480451	3300031561	Soil	MGQRSSFAAMKAEQARMTESWKAEGRLSEAWVVADPEIVEIFSAGVSFGLEMGR
Ga0310915_103826072	3300031573	Soil	MAQRSSFAEMKAEQVRMTESWKAEGRLSEAWVVADPEIVEIFSAGVSFGLEMGRRGDASYSQDEWRR
Ga0310686_1177831461	3300031708	Soil	MVRRRNFVEMQAEQTKMTESWKAEGRLSEAWVVADPEIVELFSAGVAFGMEVGRRGRSDP
Ga0307476_100337924	3300031715	Hardwood Forest Soil	MVDRRSFSEIKAEQARMTESWKAEGRLSEAWVIADPEIVEIFSAGVAFGIEMGRRSGSDPAYSPDEWRRTL
Ga0306917_113599761	3300031719	Soil	MGQRSSFAAMKAEQARMTESWKAEGRQSEAWVIADPEIVEIFAAGVSFGMEM
Ga0318500_102102641	3300031724	Soil	MGQRSSFAAMKAEQARMTESWKAEGRQSEAWVIADPEIVEIFAAGVSFGMEMGRRRDGAYSQD
Ga0318509_107966051	3300031768	Soil	MAQRSSFAEMKAEQARRTESWKAEGRLSEAWVVADPEIVEIFSAGVSFGLEMGRRRDA
Ga0318550_105829261	3300031797	Soil	MARRTSFSEMKAEQARLTQSWKTEGRLSEAWVVADPEIVEIFSAGVSFGLE
Ga0306919_108200161	3300031879	Soil	MGHRSSFAEMKAEQARMTESWKAEGRQSEAWVIADPEIVEIFAAGVSFG
Ga0306925_103928762	3300031890	Soil	MAQRSSFAEMKAEQVRMTESWKAEGRLSEAWVVADPEIVEIFSAGVSFGLEMGRRGDASYSQDEWRRALREAVE
Ga0306925_107831882	3300031890	Soil	MARRTSFAEMKAEQARMTESWKAEGRLSEAWVIADPEIVEIFSAGVSFGLEMG
Ga0318520_104846251	3300031897	Soil	MGQRSSFAAMKAEQARMTESWKAEGRQSEAWVIADPEIVEIFAAGVSFGMEMGRRRDGAYSQDEWRRALRQAVE
Ga0306923_105910022	3300031910	Soil	MARRSSFAEMKAEQARMTESWKAEGRLSEAWVVADPEIVEIFSAGVSFGLEIGRRGDGSYSQD
Ga0306923_107250102	3300031910	Soil	MNQRSSFADMKAEQQRLTASWKAEGRQSEAWAVADPEIVEIFTSGIAFGLKMA
Ga0306923_110854261	3300031910	Soil	MGQRSSFAAMKAEQARMTESWKAEGRQSEAWVIADPEIVEIFAAGVSFGMEMGRRRDGAY
Ga0310912_106606281	3300031941	Soil	MGQRSSFAAMKAEQARMTESWKAEGRQSEAWVIADPEIVEIFAAGVSFGMEMGRRRDG
Ga0310913_107484711	3300031945	Soil	MAQRSSFAEMKAEQARMTESWKAEGRQSEAWVIADPEIVEIFAAGVSFGKEMGRRRDGSYSQDEWRRALRE
Ga0310910_105720821	3300031946	Soil	MAQRSSFAEMKAEQVRMTESWKAEGRLSEAWVVADPEIVEIFSAGVSFGLEMGR
Ga0310910_111811472	3300031946	Soil	MAQRSSFAEMKAEQARMTESWKAEGRQSEAWVVADPEIVEIFSAGVSF
Ga0307479_104646791	3300031962	Hardwood Forest Soil	MAQRSTFADMKAEQAKITESWKAEGRVSEAWVVADPEIVEIFAAGVAFGMTMERRGRSDPAYSPDEWRRALREA
Ga0307479_116028861	3300031962	Hardwood Forest Soil	MVRRRSFVEMQAEQAKMTESWKAEGRLSEAWVIADPEIVELFSAGVAFGMEVGRRGR
Ga0306922_120003021	3300032001	Soil	MGQRSSFAAMKAEQARMTESWKAEGRQSEAWVIADPEIVEIFAAGVSFGMEMGRR
Ga0310911_104230462	3300032035	Soil	MARRTSFAEMKAEQARMTESWKAEGRLSEAWVIADPEIVEIFSAGVSFGLEMGRRGDATY
Ga0318533_104396462	3300032059	Soil	MAHRSSFAEMKAEQARLTQSWKAEGRLSEAWVVADPEIVEIFSAGVSFGLEMARRGDASYSQDEWRK
Ga0318510_101854911	3300032064	Soil	MGQRSSFAAMKAEQARMTESWKAEGRQSEAWVIADPEIVEIFAAGVSFGMEMGRRRDGAYSQDE
Ga0307472_1023205431	3300032205	Hardwood Forest Soil	MAQRTSFAEMKTEQAKMTESRKAEGRQSEAWAVADPEIVEIFSAGVSFGLEMGRRSDAVYSQDEWRRALRQAV
Ga0306920_1038586851	3300032261	Soil	MAKRNSFAEMKAEQARMTESWKAEGRLSEAWVIADPEIVEIFSAGVSFGLEM
Ga0335078_113890241	3300032805	Soil	MTPRSTFAEMLAEQRRMTASWKAEGRQSEAWAVADPEIVEIFSAGIAFGLQVANRRGRDPLYSPDEWRNALREA
Ga0335070_103375424	3300032829	Soil	MAQRNSFRQMKAEQAKLTESWKAEGRLSEAWAIADPEIVEIFSAGVAFG
Ga0335081_113857842	3300032892	Soil	MPHRSSFAEMKAEQAKMTESWRSEGRLSEAWVVADPEIVEVFSSGVAFGIEVASRAQREPLYS
Ga0335076_112003842	3300032955	Soil	MTPRSTFAEMLAEQRRMTASWKAEGRQSEAWAVADPEIVEIFSAGIAFGLQVAN

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F053447

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences