NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F053447

Metagenome / Metatranscriptome Family F053447

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F053447
Family Type Metagenome / Metatranscriptome
Number of Sequences 141
Average Sequence Length 60 residues
Representative Sequence MAQRSSFAEMKAEQVRMTESWKAEGRLSEAWVVADPEIVEIFSAGVSFGLEMGRRGD
Number of Associated Samples 120
Number of Associated Scaffolds 141

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 100.00 %
% of genes near scaffold ends (potentially truncated) 95.74 %
% of genes from short scaffolds (< 2000 bps) 90.78 %
Associated GOLD sequencing projects 110
AlphaFold2 3D model prediction Yes
3D model pTM-score0.38

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (51.064 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(29.078 % of family members)
Environment Ontology (ENVO) Unclassified
(35.461 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(63.830 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78
1JGI12371J11900_10136052
2JGI12712J15308_102207391
3JGI26340J50214_101681202
4Ga0062385_107442791
5Ga0062384_1002751001
6Ga0062387_1004029882
7Ga0062389_1004541393
8Ga0062595_1025572931
9Ga0066395_103725911
10Ga0066388_1021207933
11Ga0066388_1027568183
12Ga0066388_1056010571
13Ga0066388_1082176831
14Ga0070668_1012016711
15Ga0070761_103509211
16Ga0066903_1074082411
17Ga0068858_1001835404
18Ga0070766_103730853
19Ga0066787_101638562
20Ga0066790_101577272
21Ga0075017_1010406861
22Ga0070712_1006183501
23Ga0070765_1009283112
24Ga0075021_101744311
25Ga0105247_106610301
26Ga0126372_100259591
27Ga0126378_114266242
28Ga0126379_100605491
29Ga0136449_1018285531
30Ga0134126_115693701
31Ga0137363_104614062
32Ga0137419_101924744
33Ga0137404_117667691
34Ga0137407_100160414
35Ga0137407_123096371
36Ga0137410_106099152
37Ga0126369_105620371
38Ga0157372_107245621
39Ga0137420_13836452
40Ga0137403_111627682
41Ga0182036_111410712
42Ga0182035_107161441
43Ga0182032_114320371
44Ga0181505_110099291
45Ga0187806_13179221
46Ga0187785_106291951
47Ga0187779_100218721
48Ga0187777_102146672
49Ga0187816_105653641
50Ga0187766_106459811
51Ga0187784_109387861
52Ga0210407_108312181
53Ga0210407_111606922
54Ga0210407_113775011
55Ga0210403_109421332
56Ga0210399_100483541
57Ga0210399_112817792
58Ga0210401_104043241
59Ga0210401_105548382
60Ga0210401_111181992
61Ga0210404_106399971
62Ga0210405_100474314
63Ga0210396_107388271
64Ga0210396_112290121
65Ga0210386_105853851
66Ga0210386_111204401
67Ga0210383_108777711
68Ga0210394_101211061
69Ga0210394_111125371
70Ga0210394_113253031
71Ga0210390_101661951
72Ga0210390_106714631
73Ga0210390_112161361
74Ga0210402_117322532
75Ga0210410_109644922
76Ga0210409_101047245
77Ga0126371_121115481
78Ga0126371_125665341
79Ga0207681_116024521
80Ga0207701_105515412
81Ga0207668_117841662
82Ga0207677_117139562
83Ga0209871_10701321
84Ga0209839_101179001
85Ga0257178_10490992
86Ga0179587_110812431
87Ga0207724_10113701
88Ga0207825_1161092
89Ga0207840_10085431
90Ga0207783_10317321
91Ga0207852_10323572
92Ga0207817_10092061
93Ga0207806_10360562
94Ga0208604_10023603
95Ga0209732_10544742
96Ga0209248_101826431
97Ga0209655_102784681
98Ga0209448_101098451
99Ga0209693_103205062
100Ga0209380_106999601
101Ga0209624_102243411
102Ga0209067_106440461
103Ga0209698_103383191
104Ga0209069_105221631
105Ga0265354_10239611
106Ga0222749_102671531
107Ga0170834_1114359163
108Ga0265760_101510342
109Ga0170823_131652061
110Ga0318516_108806531
111Ga0318528_105480451
112Ga0310915_103826072
113Ga0310686_1177831461
114Ga0307476_100337924
115Ga0306917_113599761
116Ga0318500_102102641
117Ga0318509_107966051
118Ga0318550_105829261
119Ga0306919_108200161
120Ga0306925_103928762
121Ga0306925_107831882
122Ga0318520_104846251
123Ga0306923_105910022
124Ga0306923_107250102
125Ga0306923_110854261
126Ga0310912_106606281
127Ga0310913_107484711
128Ga0310910_105720821
129Ga0310910_111811472
130Ga0307479_104646791
131Ga0307479_116028861
132Ga0306922_120003021
133Ga0310911_104230462
134Ga0318533_104396462
135Ga0318510_101854911
136Ga0307472_1023205431
137Ga0306920_1038586851
138Ga0335078_113890241
139Ga0335070_103375424
140Ga0335081_113857842
141Ga0335076_112003842
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 49.41%    β-sheet: 0.00%    Coil/Unstructured: 50.59%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

510152025303540455055MAQRSSFAEMKAEQVRMTESWKAEGRLSEAWVVADPEIVEIFSAGVSFGLEMGRRGDSequenceα-helicesβ-strandsCoilSS Conf. score
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer

WebGL does not seem to be available.

This can be caused by an outdated browser, graphics card driver issue, or bad weather. Sometimes, just restarting the browser helps. Also, make sure hardware acceleration is enabled in your browser.

For a list of supported browsers, refer to http://caniuse.com/#feat=webgl.

Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.38
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
51.1%48.9%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds





 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Peatland
Bog Forest Soil
Freshwater Sediment
Watersheds
Soil
Vadose Zone Soil
Terrestrial Soil
Tropical Forest Soil
Peatlands Soil
Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Soil
Forest Soil
Soil
Hardwood Forest Soil
Soil
Tropical Peatland
Permafrost Soil
Soil
Tropical Forest Soil
Forest Soil
Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Switchgrass Rhizosphere
Corn Rhizosphere
Rhizosphere
Switchgrass Rhizosphere
5.7%3.5%6.4%4.3%29.1%8.5%2.8%2.8%3.5%9.9%2.8%3.5%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI12371J11900_101360523300000729Tropical Forest SoilMAKRSSFVEMKAEQDRLTQSWRAEGRLSEAWVVADPEIVEIFSAGVSFGQETARRGDGSFSQDEWRKAL
JGI12712J15308_1022073913300001471Forest SoilMAQRTSFSAIKTEQAKLAKSWKSQGRQSEAWVIADPEIVEIFSAGVAFGLEAGRRGRNDPAYSPDE
JGI26340J50214_1016812023300003368Bog Forest SoilMKAEQARMTQSWKAEGRLSEAWAVADPEIVEIFSAGVAFGMEVGRRGRSD
Ga0062385_1074427913300004080Bog Forest SoilMAERNSFSDTKTEQQKMTESWKAEGRLSEAWVIADPEIVEIFTAGVAFGVQAGRSSSSDPAYSP
Ga0062384_10027510013300004082Bog Forest SoilMAQRTSFAEMRAAQAKMTESWKAEGRLSEAWVVADAEIVEIFSAGVAFGIEVGRRGRG
Ga0062387_10040298823300004091Bog Forest SoilMAQRNSFADMKAEQDRLTESWKAEGRLSEAWAVADPEIVEIFSAGVAFGVEMGRRSRQDP
Ga0062389_10045413933300004092Bog Forest SoilMAQRSSFAEMKAEQARMTESWKAEGRTSEAWAVADPEIVEIFTAGVVFGVKAGRRNRRDPAYTPDEWRRALREAME
Ga0062595_10255729313300004479SoilMVRRRSFVEMQAEQAKMTENWKAEGRLSEAWVVADPEIVELFSAGVAFGVEVGRRGRNDPAYSPDEWRRALREAVE
Ga0066395_1037259113300004633Tropical Forest SoilMARRTSFSEMKAEQARLTQSWKTEGRLSEAWVVADPEIVEIFSAGVSFGLEVGRRGDAGY
Ga0066388_10212079333300005332Tropical Forest SoilMPQRNSFAEIKAEQARLTESWKAEGRMSEAWTVADPEIVEIFSAGVAFGLSVGRRNPPDPAYTQDEWRKALR
Ga0066388_10275681833300005332Tropical Forest SoilMGQRSSFAAMKAEQARMTESWKAEGRQSEAWVIADPEIVEIFAAGVSF
Ga0066388_10560105713300005332Tropical Forest SoilMARRNSFGEMKAEQVRMTESWKAEGRLSEAWVVADPEIVEIFSAGVSFGMNVARRGDATYSQDE
Ga0066388_10821768313300005332Tropical Forest SoilMAQRSSFADMKAEQGRMTENWKADGRQSEAWVVADPEIVEVFSAGVAFGLEM
Ga0070668_10120167113300005347Switchgrass RhizosphereMVQRSSFAEIKAEQARMTESWKAEGRTSEAWAVADPEIVAIFTAGVVFGVKVGRRNRRDPAYTPD
Ga0070761_1035092113300005591SoilMAVRNRFSEIRTEQAKMAESWKAEGRLSEAWVIADPEIVEIFSAGVAFGVEAGRRGRSDPAYSPDEWRRALR
Ga0066903_10740824113300005764Tropical Forest SoilMARRTSFSEMKAEQARLTQSWKTEGRLSEAWVVADPEIVEIFSAGVSFGLEVG
Ga0068858_10018354043300005842Switchgrass RhizosphereMAQRSSFAETKAEQARMTESWKAEGRTSEAWAVADPEIVEIFTAGVVFGVKAGRRNRRDPAYTPD
Ga0070766_1037308533300005921SoilMTVRNRFSEIKTEQAKMAESWKAEGRLSEAWVIADPEIVEIFSAGVAFGVEAGRRGRSDPAYSPDE
Ga0066787_1016385623300005950SoilMARKSTFAEMKAEQARMTESWKAEGRLSEAWVVADPEIVELFTAGVAFGVEA
Ga0066790_1015772723300005995SoilMADRTSFSDAKTEQAKMSESWKAEGRLSEAWVIADPEIVEIFSAGVAFGVEAGRRDHSDPAYSPD
Ga0075017_10104068613300006059WatershedsMPHRSSFSEMKAEQARMTESWKAEGRLSEAWVVADPEIVEIFSAGVAFGMEVGRRGRSDPAYSPDEWRRALRE
Ga0070712_10061835013300006175Corn, Switchgrass And Miscanthus RhizosphereMAQRSSFAEIRAEQARMTKSWKAEGRTSEAWAVADPEIVEIFTAGVMFGVR
Ga0070765_10092831123300006176SoilMAQRHSFAEMKSEQAKMTASWKAEGRLSEAWVIADPEIVEIFSAGVAFGVEAGRRG
Ga0075021_1017443113300006354WatershedsMAHRSSFADIKAEQARMTASWKAEGRTSEAWAVADPEIVEIFTAGVAFGVKAGRRSQREPAYT
Ga0105247_1066103013300009101Switchgrass RhizosphereMAQRSSFAETKAEQARMTESWKAEGRTSEAWAVADPEIVEIFTAGVVFGVKAG
Ga0126372_1002595913300010360Tropical Forest SoilMPQRNSFAEIKAEQARLTESWKAEGRMSEAWTVADPEIVEIFTAGVAFGVKAGRR
Ga0126378_1142662423300010361Tropical Forest SoilMARRLSFAEMMAEQARMTESWKAEGRLSEAWVIADPEIVEIFSAGVSFGLEMGRRGQATYSQDEWRRALREAVE
Ga0126379_1006054913300010366Tropical Forest SoilMGQRSSFAAMKAEQARMTERWKAEGRQSEAWVIADPEIVEIFAAGVSFGMEMGRRRDGAY
Ga0136449_10182855313300010379Peatlands SoilMADRRSFSEFKTEQAKMTESWKAEGRLSEAWVIADPEIVEIFSAGVAFGIEAGRRGGSDPAYSPDEWRR
Ga0134126_1156937013300010396Terrestrial SoilMAQRSSFAETKAEQARMTESWKAEGRTSEAWAVADPEIVEIFTAGVVFGVKAGRRN
Ga0137363_1046140623300012202Vadose Zone SoilMAQRISFAEMTAEQAKMTESWRAEGRLSEAWVVADPEIVEIFSAGVAFGVEVGRRGRSHPGYSPDEWRRALREA
Ga0137419_1019247443300012925Vadose Zone SoilMAQRSSFAEMKAEQARMTASWKAEGRTSEAWAVVDPEIVEIFSAGVT
Ga0137404_1176676913300012929Vadose Zone SoilMAQRSTFAVTKAEQARMTESWKAEGRTSEAWTVADPEIVEIFAAGVVFGVK
Ga0137407_1001604143300012930Vadose Zone SoilMAQRSSFAEMKAEQARMTASWKAEGRTSEAWAIADPEIVEIFSAGVVFGIDAGRHNLRDPAYTPDE*
Ga0137407_1230963713300012930Vadose Zone SoilMKAEQAKMTASWKAEGRLSEAWVVADPEISEIFSAGVAFGIEMGRH
Ga0137410_1060991523300012944Vadose Zone SoilMAQRSSFAEMKAEQARMTASWKAEGRTSEAWAIADAEIVEIFSAGVVFGIDAGRRNRRDPAYTPDEWRKALREAVE
Ga0126369_1056203713300012971Tropical Forest SoilMGQRSSFAAMKAEQARMTESWKAEGRQSEAWVIADPEIVEIFAAGVSFGMEMGRRRDGAYTQ
Ga0157372_1072456213300013307Corn RhizosphereMMQRSSFAEIKAEQARMTESWKAEGRTSEAWAVADPEIVAIFTAGVV
Ga0137420_138364523300015054Vadose Zone SoilMAQRSSFAEMRAEQARMTASWKAEGRTSEAWAVVDPEIVEIFSAGVAFGVEAGRRNRRDPAYTPE*
Ga0137403_1116276823300015264Vadose Zone SoilMAQRSTFAVTKAEQARMTESWKAEGRTSEAWTVADPEIVEIFAAGVVFGVKAGRHNHRDPAYTPD
Ga0182036_1114107123300016270SoilMAQRSSFAEMKAEQVRMTESWKAEGRLSEAWVVADPEIVEIFSAGVSFGLEMGRRGD
Ga0182035_1071614413300016341SoilMAQRSSFAEMKAEQVRMTESWKAEGRLSEAWVVADPEIVEIFSAGVSFG
Ga0182032_1143203713300016357SoilMARRTSFAEMKAEQARMTESWKAEGRLSEAWVIADPEIVEIFSAGVSFGLEMGRRGDATYSQDEWRRALREA
Ga0181505_1100992913300016750PeatlandMAPRSSFAEMKAEQDRFTQSWKAEGRLSEAWAVADPEIVEIFSAGVAFGV
Ga0187806_131792213300017928Freshwater SedimentMKHRSSFAEMKAEQQRMTESWKAEGRQSEAWTVADPEIVEIFSAGIAFGLKVARRKDRDPLYSPNEWRKA
Ga0187785_1062919513300017947Tropical PeatlandMSRRNSFAEMKAEQARMTESWKGEGRLSEAWVVADPEIVEIFSAGVSFGLEIGRSGHATYSQDEWRKALREAVER
Ga0187779_1002187213300017959Tropical PeatlandMSPRSSFADMKAEQARMTESWKSEGRQSEAWAVADPEIVEVFDAGIAFG
Ga0187777_1021466723300017974Tropical PeatlandMAQRSSFADMKAEQQRMTASWKAEGRQSEAWTVADPEVVEIFTAGIVFGMKVARRKDRDPLYSPNEWRKA
Ga0187816_1056536413300017995Freshwater SedimentMKHRSSFAEMKAEQQRMTESWKAEGRQSEAWTVANPEIVEIFSAGIAFGLKVARRKDRDPLYSPNEWRKALRE
Ga0187766_1064598113300018058Tropical PeatlandMAQRSSFADMKAEQQRMTASWKAEGRQSEAWTVADPEVVEIFTAGIVFGMKVARRKD
Ga0187784_1093878613300018062Tropical PeatlandMIQKNSFSEMKAEQARMTESWKAEGRLSEAWVVADPEIVEIFSAGVSFGLEAARRGEASYSQDEWRKALREAV
Ga0210407_1083121813300020579SoilMAQRSSFAETKAEQARMTESWKAEGRTSEAWAVADPEIVEIFTAGVAFGVKAGRRSRRDPAYTPDEW
Ga0210407_1116069223300020579SoilMAHRSSFAEMKAEQAKMTASWKAEGRLSEAWVVADPEIVEIFSAGVEFGR
Ga0210407_1137750113300020579SoilMVRRRSFVEMQAEQAKMTENWKAEGRLSEAWVVADPEIVELFSAGVAFGVEVGRRGRDDPAYSPDEWR
Ga0210403_1094213323300020580SoilMAQRHSFAEMKSEQAKMTASWKAEGRLSEAWVIADPEIVEIFSAGVAFGVEAGRRGR
Ga0210399_1004835413300020581SoilMAQRSSFAEMKAEQAKMTASWKAEGRLSEAWVVADPEIVEIFSAGATFGMEVGRRGSGEPAYSPDEWRR
Ga0210399_1128177923300020581SoilMVRRRSFVEIQAEQVKMTESWKAEGRLSEAWVVADPEIVELFSAGVAFGVEVGRSGRTDP
Ga0210401_1040432413300020583SoilMTESWKAEGRTTEAWAVADPEIVEIFSAGVAFGIKAGRRSRRDPGYTPD
Ga0210401_1055483823300020583SoilMAHRSSFAEMKAEQAKMTASWKAEGRLSEAWVVADPEIVEIFSAGVEFGREVGRRGRSEPAYSPDEWRKALR
Ga0210401_1111819923300020583SoilMNRRSSFAEMKAEQQRMTESWKAEGRQSEAWAVADPEVVEIFSAGIAFGLKVARRKGERDPLYSPDEWRKAL
Ga0210404_1063999713300021088SoilMAQRSSFAEIRAEQARMTKSWKAEGRTSEAWAVADPEIVEIFTAGVMFGVRAGRRG
Ga0210405_1004743143300021171SoilMVRRRSFVEMQAEQAKMTESWKAEGRLSEAWVIADPEIVELFSAGVAFGMEVGRR
Ga0210396_1073882713300021180SoilMAKRSSFAEMKAEQAKMTASWKAEGRLSEAWVVADPEIVEIFSAGAAFGMEVGRRGRTDPAYSPDEWRKALRE
Ga0210396_1122901213300021180SoilMAQRSSFAEMKAEQARMTASWKAEGRLSEAWVVADPEIVEIFSAGVTFGMEV
Ga0210386_1058538513300021406SoilMVRRRSFVEMQAEQAKMTESWKAEGRLSEAWVVADPEIVELFSAGVAFG
Ga0210386_1112044013300021406SoilMGQRNSFAEMKAEQAKMTASWKAEGRLSEAWVVADPEIVEIFSAGVAFGMEVG
Ga0210383_1087777113300021407SoilMAVRNKFSDVKTEQAKLAESWKSEGRQSEAWVIADPEIVEIFSAGVAF
Ga0210394_1012110613300021420SoilMAQRSSFAEMKAEQAKMTASWKAEGRLSEAWVVADPEIVETFSAGVAFGMEVGRRGRTDPAY
Ga0210394_1111253713300021420SoilMAVRNRFSEIKTEQAKMAESWKAEGRLSEAWVIADPEIVEIFSAGVAFG
Ga0210394_1132530313300021420SoilMTDRRSFSEMKTEQARMTESWKAEGRLSEAWVIADPEIVEIFSAGVSFGIE
Ga0210390_1016619513300021474SoilMAHRSSFAEMKAEQAKMTASWKAEGRLSEAWVVADPEIVEIFSAGVAFGMEVGRRG
Ga0210390_1067146313300021474SoilMAQRRSFAETKAEQARMTQSWKAEGRTSEAWAVADLEIVEIFTAGVVFGLKAGRRNRPDPAYTP
Ga0210390_1121613613300021474SoilMNRRSSFAEMKAEQQRMTESWKAEGRQSEAWAVADPEIVEIFSAGIAFGLKVARRK
Ga0210402_1173225323300021478SoilMAQRNSFAEMRAEQAKVTESWKAEGRQSEAWVIADPEIVEIFSAGVAFGIEVGQRGRGDLAYSPDE
Ga0210410_1096449223300021479SoilMAVRNRFSEIKTEQAKMAESWKAEGRLSEAWVIADPEIVEIFSAGVAFGVEAGRRGRSDPAYSP
Ga0210409_1010472453300021559SoilMAQRSSFAGMKAEQARMTAAWKAEGRLSEAWVVADPEIVEIFSAGVAFGMEVGRRGRSDPAYSPDEWRKAF
Ga0126371_1211154813300021560Tropical Forest SoilMAQRSSFAEMKAEQARMTESWKAEGRLSEAWVVADPEIVEIFSAGVSFGVEMGRRGDGYYSQDEWRRALREAVER
Ga0126371_1256653413300021560Tropical Forest SoilMAQRSSFADMKAEQARMTEDWKADGRQSEAWVVADPEIVEVFSAGVAFGLEMGRRGHNDPAYSPDEWRRAFR
Ga0207681_1160245213300025923Switchgrass RhizosphereMAQRSSFAETKAEQARMTESWKAEGRTSEAWAVADPEIVEIFTAGVVFGVKAGRRNRRDPAYTPDEWRRALREAMER
Ga0207701_1055154123300025930Corn, Switchgrass And Miscanthus RhizosphereMAQRSSFAETKAEQARMTESWKAEGRTSEAWAVADPEIVEIFTAGV
Ga0207668_1178416623300025972Switchgrass RhizosphereMVQRSSFAEIKAEQARMTESWKAEGRTSEAWAVADPEIVEIFTAGVVFGVKAGRRNRRDPAYTPDEWRRALREAM
Ga0207677_1171395623300026023Miscanthus RhizosphereMMQRSSFAEIKAEQARMTESWKAEGRTSEAWAVADPEIVAIFTAGVVFGVKVGRRNR
Ga0209871_107013213300026217Permafrost SoilMAQRRSFAEIKAEQARMTESWKAEGRTSEAWAVADPEVVEIFAAGVVFGLKSGRSNR
Ga0209839_1011790013300026294SoilMADRTSFSDAKTEQAKMSESWKAEGRLSEAWVIADPEIVEIFSAGVAFGVEAGRRDHSDPAYSPDEWR
Ga0257178_104909923300026446SoilMAKRSTFAEMKAEQAKMTASWKAEGRLSEAWVVADPEIVEIFSAGIAFGMEVGRRVRTDPAYSPDE
Ga0179587_1108124313300026557Vadose Zone SoilMGQRSSFAEMKAEQAKMTASWKAEGRLSAAWVVADPEIVEIFSAGVAFGMEVGRRGRS
Ga0207724_101137013300026862Tropical Forest SoilMAQRSSFAEMKAEQARMTQSWKAEGRLSEAWVVADPEIVEIFSAGVSFGLEM
Ga0207825_11610923300026871Tropical Forest SoilMAQRSSFAEMKAEQARMTQSWKAEGRLSEAWVVADPEIVEIFSAGVSFGLEMGRRGDASY
Ga0207840_100854313300026910Tropical Forest SoilMAQRSSFAEMKAEQARMTQSWKAEGRLSEAWVVADPEIVEIFSAGVSFGLEMGRRGDASYSQD
Ga0207783_103173213300026942Tropical Forest SoilMAQRSSFAEMKAEQARMTQSWKAEGRLSEAWVVADPEIVEIFSAGVSFGLEMGRRGDASYSQDEWRRALREAV
Ga0207852_103235723300026959Tropical Forest SoilMAKRSSFVEMKAEQDRLTQSWRAEGRLSEAWVVADPEIVEIFSAGVSFGQETARRGDGS
Ga0207817_100920613300026979Tropical Forest SoilMAQRSSFAEMKAEQARMTQSWKAEGRLSEAWVVADPEIVEIFSAGVSF
Ga0207806_103605623300027049Tropical Forest SoilMAQRSSFAEMKAEQARMTQSWKAEGRLSEAWVVADPEIVEIFSAGVSFGLEMGR
Ga0208604_100236033300027090Forest SoilMVRRRSFVEMQAEQAKMTESWKAEGRLSEAWVVADPEIVELFSAGVAFGMEVGRRGRSDPAYSPDEWRRALREA
Ga0209732_105447423300027117Forest SoilMFHRISFSETKTEQRKLTESWKAEGRTSEAWVIADPEIVEIFSAGVAFGIEVGRRGQ
Ga0209248_1018264313300027729Bog Forest SoilMSRRSSFAEIKAEQAKMTASWKADGRLSEAWVVADPEIVEIFSAGVAFGIE
Ga0209655_1027846813300027767Bog Forest SoilMANRNSFSDMKNEQAKLTESWKAEGRLSEAWVIADPEIVEIFSAGVAFGM
Ga0209448_1010984513300027783Bog Forest SoilMAQRNSFADMKAEQDRLTESWKAEGRLSEAWAVADPEIVEIFSAGVAFGVEMGRRSRQDPAY
Ga0209693_1032050623300027855SoilMAQRSSFAEMKAEQAKMTASWKAEGRLSEAWVVADPEIVEIFSAGATFGMEVGRRGSGEP
Ga0209380_1069996013300027889SoilMVDRRSFSEIKAEQARMTASWKAEGRLSEAWVIADPEIVEIFSAGVAFGIEMGRRSGSDPAYSPDEWRRT
Ga0209624_1022434113300027895Forest SoilMVHRNSFSETKTEQRKLSQSWKSEGRVSEAWVIADPEIVEIFSAGVAFGIQVGRRGQG
Ga0209067_1064404613300027898WatershedsMTHRSKFADLQAEQAKITADWKAQGRLSEPWALADAEIVEIFSAGVAFGLTAG
Ga0209698_1033831913300027911WatershedsMGQRHSFAEMLVEQRKLTASWKAEGRQSEAWVVADPEIVEIFSAGVAFGLEAGRRGHD
Ga0209069_1052216313300027915WatershedsMAQRSSFAEMRAEQARMTASWRAEGRASEAWAVVDPEIVEIFSAGVAFGIEAGRRARRDPSY
Ga0265354_102396113300028016RhizosphereMAHRTSFSAIKTEQAKLAKSWKAEGRQSEAWVIADPEIVEIFSAGVAFGLEAGRRG
Ga0222749_1026715313300029636SoilMAQRSSFAEMKAEQARMTASWKAEGRLSEAWVVADPEIVEIFSAGVTFGMEVGRRGRSE
Ga0170834_11143591633300031057Forest SoilMTDRRSFSEMKAEQARMTESWKAEGRLSEAWVIADPEIVEIFSAGVSFGIE
Ga0265760_1015103423300031090SoilMIRRRSFVEMKSEQAKMTASWKAEGRLCEAWVVADPEIVGIFSAGVAFGMEVGRRGRSDPAYSPDEWRKALREAV
Ga0170823_1316520613300031128Forest SoilMARRSSFAEMKAEQAKMTESWKAEGRLSEAWVVADPEIIEIFSAGVSFGLER
Ga0318516_1088065313300031543SoilMAQRSSFAEMKAEQARMTESWKAEGRLSEAWVVADPEIVEIFSAGVSFGLEMGRRRDASY
Ga0318528_1054804513300031561SoilMGQRSSFAAMKAEQARMTESWKAEGRLSEAWVVADPEIVEIFSAGVSFGLEMGR
Ga0310915_1038260723300031573SoilMAQRSSFAEMKAEQVRMTESWKAEGRLSEAWVVADPEIVEIFSAGVSFGLEMGRRGDASYSQDEWRR
Ga0310686_11778314613300031708SoilMVRRRNFVEMQAEQTKMTESWKAEGRLSEAWVVADPEIVELFSAGVAFGMEVGRRGRSDP
Ga0307476_1003379243300031715Hardwood Forest SoilMVDRRSFSEIKAEQARMTESWKAEGRLSEAWVIADPEIVEIFSAGVAFGIEMGRRSGSDPAYSPDEWRRTL
Ga0306917_1135997613300031719SoilMGQRSSFAAMKAEQARMTESWKAEGRQSEAWVIADPEIVEIFAAGVSFGMEM
Ga0318500_1021026413300031724SoilMGQRSSFAAMKAEQARMTESWKAEGRQSEAWVIADPEIVEIFAAGVSFGMEMGRRRDGAYSQD
Ga0318509_1079660513300031768SoilMAQRSSFAEMKAEQARRTESWKAEGRLSEAWVVADPEIVEIFSAGVSFGLEMGRRRDA
Ga0318550_1058292613300031797SoilMARRTSFSEMKAEQARLTQSWKTEGRLSEAWVVADPEIVEIFSAGVSFGLE
Ga0306919_1082001613300031879SoilMGHRSSFAEMKAEQARMTESWKAEGRQSEAWVIADPEIVEIFAAGVSFG
Ga0306925_1039287623300031890SoilMAQRSSFAEMKAEQVRMTESWKAEGRLSEAWVVADPEIVEIFSAGVSFGLEMGRRGDASYSQDEWRRALREAVE
Ga0306925_1078318823300031890SoilMARRTSFAEMKAEQARMTESWKAEGRLSEAWVIADPEIVEIFSAGVSFGLEMG
Ga0318520_1048462513300031897SoilMGQRSSFAAMKAEQARMTESWKAEGRQSEAWVIADPEIVEIFAAGVSFGMEMGRRRDGAYSQDEWRRALRQAVE
Ga0306923_1059100223300031910SoilMARRSSFAEMKAEQARMTESWKAEGRLSEAWVVADPEIVEIFSAGVSFGLEIGRRGDGSYSQD
Ga0306923_1072501023300031910SoilMNQRSSFADMKAEQQRLTASWKAEGRQSEAWAVADPEIVEIFTSGIAFGLKMA
Ga0306923_1108542613300031910SoilMGQRSSFAAMKAEQARMTESWKAEGRQSEAWVIADPEIVEIFAAGVSFGMEMGRRRDGAY
Ga0310912_1066062813300031941SoilMGQRSSFAAMKAEQARMTESWKAEGRQSEAWVIADPEIVEIFAAGVSFGMEMGRRRDG
Ga0310913_1074847113300031945SoilMAQRSSFAEMKAEQARMTESWKAEGRQSEAWVIADPEIVEIFAAGVSFGKEMGRRRDGSYSQDEWRRALRE
Ga0310910_1057208213300031946SoilMAQRSSFAEMKAEQVRMTESWKAEGRLSEAWVVADPEIVEIFSAGVSFGLEMGR
Ga0310910_1118114723300031946SoilMAQRSSFAEMKAEQARMTESWKAEGRQSEAWVVADPEIVEIFSAGVSF
Ga0307479_1046467913300031962Hardwood Forest SoilMAQRSTFADMKAEQAKITESWKAEGRVSEAWVVADPEIVEIFAAGVAFGMTMERRGRSDPAYSPDEWRRALREA
Ga0307479_1160288613300031962Hardwood Forest SoilMVRRRSFVEMQAEQAKMTESWKAEGRLSEAWVIADPEIVELFSAGVAFGMEVGRRGR
Ga0306922_1200030213300032001SoilMGQRSSFAAMKAEQARMTESWKAEGRQSEAWVIADPEIVEIFAAGVSFGMEMGRR
Ga0310911_1042304623300032035SoilMARRTSFAEMKAEQARMTESWKAEGRLSEAWVIADPEIVEIFSAGVSFGLEMGRRGDATY
Ga0318533_1043964623300032059SoilMAHRSSFAEMKAEQARLTQSWKAEGRLSEAWVVADPEIVEIFSAGVSFGLEMARRGDASYSQDEWRK
Ga0318510_1018549113300032064SoilMGQRSSFAAMKAEQARMTESWKAEGRQSEAWVIADPEIVEIFAAGVSFGMEMGRRRDGAYSQDE
Ga0307472_10232054313300032205Hardwood Forest SoilMAQRTSFAEMKTEQAKMTESRKAEGRQSEAWAVADPEIVEIFSAGVSFGLEMGRRSDAVYSQDEWRRALRQAV
Ga0306920_10385868513300032261SoilMAKRNSFAEMKAEQARMTESWKAEGRLSEAWVIADPEIVEIFSAGVSFGLEM
Ga0335078_1138902413300032805SoilMTPRSTFAEMLAEQRRMTASWKAEGRQSEAWAVADPEIVEIFSAGIAFGLQVANRRGRDPLYSPDEWRNALREA
Ga0335070_1033754243300032829SoilMAQRNSFRQMKAEQAKLTESWKAEGRLSEAWAIADPEIVEIFSAGVAFG
Ga0335081_1138578423300032892SoilMPHRSSFAEMKAEQAKMTESWRSEGRLSEAWVVADPEIVEVFSSGVAFGIEVASRAQREPLYS
Ga0335076_1120038423300032955SoilMTPRSTFAEMLAEQRRMTASWKAEGRQSEAWAVADPEIVEIFSAGIAFGLQVAN


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.