Metagenome / Metatranscriptome Family F053397

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F053397
Family Type	Metagenome / Metatranscriptome
Number of Sequences	141
Average Sequence Length	60 residues
Representative Sequence	MSDVDNDLSADTARFQAFAQRQDDLPAPWHMRVPGSKIGLLAGIVVGVAVLAAIIAALLIG
Number of Associated Samples	97
Number of Associated Scaffolds	141

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	55.32 %
% of genes near scaffold ends (potentially truncated)	30.50 %
% of genes from short scaffolds (< 2000 bps)	85.11 %
Associated GOLD sequencing projects	94
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.42

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (91.489 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (24.113 % of family members)
Environment Ontology (ENVO)	Unclassified (36.170 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (51.064 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 57.30% β-sheet: 0.00% Coil/Unstructured: 42.70%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.42
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.42
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 141 Family Scaffolds
PF01037	AsnC_trans_reg	22.70
PF13404	HTH_AsnC-type	19.86
PF00106	adh_short	19.15
PF13377	Peripla_BP_3	12.06
PF13520	AA_permease_2	8.51
PF00126	HTH_1	3.55
PF07730	HisKA_3	2.13
PF00486	Trans_reg_C	1.42
PF00491	Arginase	1.42
PF00072	Response_reg	0.71
PF03176	MMPL	0.71
PF03466	LysR_substrate	0.71

COG ID	Name	Functional Category	% Frequency in 141 Family Scaffolds
COG3850	Signal transduction histidine kinase NarQ, nitrate/nitrite-specific	Signal transduction mechanisms [T]	2.13
COG3851	Signal transduction histidine kinase UhpB, glucose-6-phosphate specific	Signal transduction mechanisms [T]	2.13
COG4564	Signal transduction histidine kinase	Signal transduction mechanisms [T]	2.13
COG4585	Signal transduction histidine kinase ComP	Signal transduction mechanisms [T]	2.13
COG0010	Arginase/agmatinase family enzyme	Amino acid transport and metabolism [E]	1.42
COG1033	Predicted exporter protein, RND superfamily	General function prediction only [R]	0.71
COG2409	Predicted lipid transporter YdfJ, MMPL/SSD domain, RND superfamily	General function prediction only [R]	0.71

NCBI Taxonomy

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Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	91.49 %
Unclassified	root	N/A	8.51 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	91.49 %
Unclassified	root	N/A	8.51 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	91.49 %
Unclassified	root	N/A	8.51 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	83.69 %
Unclassified	root	N/A	8.51 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	1.42 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	82.98 %
Unclassified	root	N/A	8.51 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1.42 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.71 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	56.03 %
Unclassified	root	N/A	8.51 %
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	1.42 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.71 %

Name	Rank	Taxonomy	Distribution
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	12.77 %
Unclassified	root	N/A	8.51 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	4.26 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	2.84 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1.42 %
Geodermatophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales	0.71 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.71 %

Name	Rank	Taxonomy	Distribution
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	8.51 %
Unclassified	root	N/A	8.51 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	4.26 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	2.84 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	1.42 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1.42 %
Geodermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	0.71 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.71 %

Name	Rank	Taxonomy	Distribution
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	8.51 %
Unclassified	root	N/A	8.51 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	4.26 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	2.13 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	1.42 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1.42 %
Geodermatophilus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus	0.71 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.71 %

Name	Rank	Taxonomy	Distribution
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	8.51 %
Unclassified	root	N/A	8.51 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	4.26 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	2.13 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	1.42 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1.42 %
Geodermatophilus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus	0.71 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.71 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459010\|GIO7OMY01AHRSB	Not Available	518	Open in IMG/M
3300003505\|JGIcombinedJ51221_10071890	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1349	Open in IMG/M
3300004633\|Ga0066395_10888958	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	539	Open in IMG/M
3300005332\|Ga0066388_100985175	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1409	Open in IMG/M
3300005332\|Ga0066388_101427881	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1204	Open in IMG/M
3300005363\|Ga0008090_15661257	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1713	Open in IMG/M
3300005435\|Ga0070714_101699513	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	616	Open in IMG/M
3300005437\|Ga0070710_11366400	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	529	Open in IMG/M
3300005467\|Ga0070706_100099482	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2702	Open in IMG/M
3300005467\|Ga0070706_100638522	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	988	Open in IMG/M
3300005518\|Ga0070699_100583293	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1019	Open in IMG/M
3300005524\|Ga0070737_10004829	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	13207	Open in IMG/M
3300005537\|Ga0070730_10488782	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	791	Open in IMG/M
3300005541\|Ga0070733_10189920	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1341	Open in IMG/M
3300005713\|Ga0066905_100619180	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus	919	Open in IMG/M
3300005764\|Ga0066903_100039285	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	5550	Open in IMG/M
3300005764\|Ga0066903_100996081	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1531	Open in IMG/M
3300005764\|Ga0066903_107389966	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	567	Open in IMG/M
3300005764\|Ga0066903_107463915	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	564	Open in IMG/M
3300005764\|Ga0066903_108703466	Not Available	516	Open in IMG/M
3300005921\|Ga0070766_10583332	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	749	Open in IMG/M
3300006028\|Ga0070717_10488168	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1112	Open in IMG/M
3300006059\|Ga0075017_100636146	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	818	Open in IMG/M
3300006162\|Ga0075030_100328058	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1222	Open in IMG/M
3300006176\|Ga0070765_102045600	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	535	Open in IMG/M
3300006804\|Ga0079221_11101242	Not Available	608	Open in IMG/M
3300010048\|Ga0126373_10122684	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2433	Open in IMG/M
3300010048\|Ga0126373_10122730	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2433	Open in IMG/M
3300010048\|Ga0126373_10465533	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1301	Open in IMG/M
3300010048\|Ga0126373_11510275	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	737	Open in IMG/M
3300010048\|Ga0126373_11532351	Not Available	732	Open in IMG/M
3300010048\|Ga0126373_11614923	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	713	Open in IMG/M
3300010048\|Ga0126373_12168192	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	617	Open in IMG/M
3300010048\|Ga0126373_12898975	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	535	Open in IMG/M
3300010359\|Ga0126376_10936282	All Organisms → cellular organisms → Bacteria	860	Open in IMG/M
3300010359\|Ga0126376_12245159	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	591	Open in IMG/M
3300010360\|Ga0126372_10412405	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1237	Open in IMG/M
3300010361\|Ga0126378_11070055	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	908	Open in IMG/M
3300010361\|Ga0126378_11182775	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	863	Open in IMG/M
3300010366\|Ga0126379_12270478	All Organisms → cellular organisms → Bacteria	643	Open in IMG/M
3300010376\|Ga0126381_101828513	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	877	Open in IMG/M
3300010376\|Ga0126381_102171106	All Organisms → cellular organisms → Bacteria	799	Open in IMG/M
3300010376\|Ga0126381_104261403	Not Available	554	Open in IMG/M
3300010396\|Ga0134126_10358866	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1699	Open in IMG/M
3300010937\|Ga0137776_1727755	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1345	Open in IMG/M
3300012201\|Ga0137365_10524315	All Organisms → cellular organisms → Bacteria	870	Open in IMG/M
3300012971\|Ga0126369_10438144	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1353	Open in IMG/M
3300016319\|Ga0182033_10220323	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1523	Open in IMG/M
3300016357\|Ga0182032_10150032	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1723	Open in IMG/M
3300017821\|Ga0187812_1000232	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	20089	Open in IMG/M
3300017821\|Ga0187812_1048994	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1427	Open in IMG/M
3300017926\|Ga0187807_1000351	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	14335	Open in IMG/M
3300017926\|Ga0187807_1083957	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	996	Open in IMG/M
3300017928\|Ga0187806_1038127	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1438	Open in IMG/M
3300017942\|Ga0187808_10298488	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	726	Open in IMG/M
3300017970\|Ga0187783_10228399	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	1363	Open in IMG/M
3300017970\|Ga0187783_10972444	All Organisms → cellular organisms → Bacteria	612	Open in IMG/M
3300018007\|Ga0187805_10341303	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	691	Open in IMG/M
3300020579\|Ga0210407_10724459	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	770	Open in IMG/M
3300020581\|Ga0210399_10106309	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2299	Open in IMG/M
3300020581\|Ga0210399_10512566	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	996	Open in IMG/M
3300020581\|Ga0210399_10719779	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	819	Open in IMG/M
3300020582\|Ga0210395_10018345	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5144	Open in IMG/M
3300021374\|Ga0213881_10236319	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	810	Open in IMG/M
3300021432\|Ga0210384_10524235	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1066	Open in IMG/M
3300021477\|Ga0210398_10200062	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1628	Open in IMG/M
3300021559\|Ga0210409_10777888	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	829	Open in IMG/M
3300021560\|Ga0126371_10234605	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1944	Open in IMG/M
3300021560\|Ga0126371_10430588	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1464	Open in IMG/M
3300021560\|Ga0126371_10605047	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1245	Open in IMG/M
3300021560\|Ga0126371_11722630	Not Available	750	Open in IMG/M
3300021560\|Ga0126371_12668148	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	605	Open in IMG/M
3300022512\|Ga0242676_1038651	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	563	Open in IMG/M
3300022528\|Ga0242669_1035502	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	799	Open in IMG/M
3300022713\|Ga0242677_1086791	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	512	Open in IMG/M
3300025910\|Ga0207684_10084226	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2708	Open in IMG/M
3300026489\|Ga0257160_1033549	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	855	Open in IMG/M
3300026498\|Ga0257156_1089622	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	639	Open in IMG/M
3300027812\|Ga0209656_10026667	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3472	Open in IMG/M
3300027824\|Ga0209040_10538256	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	510	Open in IMG/M
3300027968\|Ga0209061_1037484	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2162	Open in IMG/M
3300031057\|Ga0170834_113555155	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	542	Open in IMG/M
3300031231\|Ga0170824_116690125	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	928	Open in IMG/M
3300031543\|Ga0318516_10580781	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	640	Open in IMG/M
3300031564\|Ga0318573_10451640	All Organisms → cellular organisms → Bacteria	691	Open in IMG/M
3300031640\|Ga0318555_10747930	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	528	Open in IMG/M
3300031668\|Ga0318542_10039196	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2096	Open in IMG/M
3300031681\|Ga0318572_10255290	All Organisms → cellular organisms → Bacteria	1031	Open in IMG/M
3300031681\|Ga0318572_10410068	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	805	Open in IMG/M
3300031708\|Ga0310686_116910584	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2397	Open in IMG/M
3300031715\|Ga0307476_10035047	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3359	Open in IMG/M
3300031718\|Ga0307474_10012966	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	6032	Open in IMG/M
3300031723\|Ga0318493_10249222	Not Available	948	Open in IMG/M
3300031744\|Ga0306918_10485353	Not Available	967	Open in IMG/M
3300031753\|Ga0307477_10137793	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1703	Open in IMG/M
3300031753\|Ga0307477_10612226	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	734	Open in IMG/M
3300031754\|Ga0307475_10986278	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	663	Open in IMG/M
3300031764\|Ga0318535_10435704	Not Available	584	Open in IMG/M
3300031777\|Ga0318543_10507841	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	540	Open in IMG/M
3300031794\|Ga0318503_10086230	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	989	Open in IMG/M
3300031845\|Ga0318511_10024620	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2242	Open in IMG/M
3300031879\|Ga0306919_10393045	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1063	Open in IMG/M
3300031890\|Ga0306925_10024070	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	6130	Open in IMG/M
3300031890\|Ga0306925_10621959	Not Available	1138	Open in IMG/M
3300031890\|Ga0306925_12074745	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	534	Open in IMG/M
3300031896\|Ga0318551_10241135	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1008	Open in IMG/M
3300031941\|Ga0310912_10475271	All Organisms → cellular organisms → Bacteria	975	Open in IMG/M
3300031945\|Ga0310913_11016401	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	581	Open in IMG/M
3300031947\|Ga0310909_10945767	Not Available	706	Open in IMG/M
3300031954\|Ga0306926_11357523	All Organisms → cellular organisms → Bacteria	827	Open in IMG/M
3300031954\|Ga0306926_11746876	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	708	Open in IMG/M
3300032009\|Ga0318563_10354464	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	794	Open in IMG/M
3300032010\|Ga0318569_10045462	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1884	Open in IMG/M
3300032044\|Ga0318558_10070028	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1594	Open in IMG/M
3300032051\|Ga0318532_10066574	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1251	Open in IMG/M
3300032055\|Ga0318575_10339851	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	760	Open in IMG/M
3300032076\|Ga0306924_10341485	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1718	Open in IMG/M
3300032261\|Ga0306920_103101010	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	625	Open in IMG/M
3300032770\|Ga0335085_11520509	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	696	Open in IMG/M
3300032770\|Ga0335085_12326941	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	535	Open in IMG/M
3300032829\|Ga0335070_11437418	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	629	Open in IMG/M
3300032895\|Ga0335074_10110748	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3587	Open in IMG/M
3300032895\|Ga0335074_10174438	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2672	Open in IMG/M
3300032895\|Ga0335074_10655480	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1027	Open in IMG/M
3300032895\|Ga0335074_10710316	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	965	Open in IMG/M
3300032895\|Ga0335074_10745821	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	929	Open in IMG/M
3300032895\|Ga0335074_10776600	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	901	Open in IMG/M
3300032895\|Ga0335074_11138159	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	667	Open in IMG/M
3300032895\|Ga0335074_11304300	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	599	Open in IMG/M
3300032896\|Ga0335075_10185555	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	2518	Open in IMG/M
3300032896\|Ga0335075_10559506	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1146	Open in IMG/M
3300032896\|Ga0335075_11198204	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	659	Open in IMG/M
3300032897\|Ga0335071_10286466	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1601	Open in IMG/M
3300032898\|Ga0335072_10635807	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1062	Open in IMG/M
3300032898\|Ga0335072_10955709	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	793	Open in IMG/M
3300032898\|Ga0335072_11129743	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	704	Open in IMG/M
3300032955\|Ga0335076_10320721	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1437	Open in IMG/M
3300033134\|Ga0335073_10522287	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1349	Open in IMG/M
3300033134\|Ga0335073_11125415	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	797	Open in IMG/M
3300033158\|Ga0335077_10257033	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1932	Open in IMG/M
3300033289\|Ga0310914_11200192	Not Available	660	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	91.49%
Aquatic	Environmental → Aquatic	8.51%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	90.78%
Freshwater	Environmental → Aquatic → Freshwater	6.38%
Sediment	Environmental → Aquatic → Sediment	1.42%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.71%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	0.71%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	60.28%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	17.02%
Loam	Environmental → Terrestrial → Soil → Loam	13.48%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	6.38%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.42%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.71%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	0.71%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	36.88%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	21.28%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	17.02%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.51%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	4.96%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.96%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.42%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.42%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment	0.71%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.71%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.71%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.71%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	0.71%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	24.11%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	16.31%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	15.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	7.80%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	6.38%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	4.96%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.26%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.55%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.84%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.42%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.42%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.42%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.42%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.42%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment → Sediment	0.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.71%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.71%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.71%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.71%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.71%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.71%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.71%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	0.71%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.71%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459010	Grass soil microbial communities from Rothamsted Park, UK - December 2009 direct MP BIO1O1 lysis 0-9cm (no DNA from 10 to 21cm!!!)	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005524	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen10_05102014_R1	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010937	Fumarole sediment microbial communities, Furnas, Sao Miguel, Azores. Combined Assembly of Gp0156138, Gp0156139	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300017821	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_2	Environmental	Open in IMG/M
3300017926	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_2	Environmental	Open in IMG/M
3300017928	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021374	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R08	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022512	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022528	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022713	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026489	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-11-A	Environmental	Open in IMG/M
3300026498	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-49-A	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027824	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027968	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen10_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031794	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M
3300032897	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F62_03621870	2170459010	Grass Soil	MSDVDNDLSADTAKFRAFAQRQDDLPAPWHMRVPGSKIGLLAGIVVGVAVLAAIVAAVLI
JGIcombinedJ51221_100718902	3300003505	Forest Soil	MSDVDNDLSADTARFQAFAQRQDDDPPAPWHMRVPGSKIGLLAGIVVGVAVLAAIVAAVLIG*
Ga0066395_108889582	3300004633	Tropical Forest Soil	MSEVDNDLSADTADFQAFADRQDEDLPAPWQMRVPGSKIGLLAAIVIVVAVLAGIIFSVIAG*
Ga0066388_1009851752	3300005332	Tropical Forest Soil	MSEVDNDLSADTAHFQAFADRQDEELPAPWQMRVPGSKIGLLAAIVIVVAVVAGIIFSVIAG*
Ga0066388_1014278812	3300005332	Tropical Forest Soil	MSDVDKDLSADTARFRAFAQRQDDLPAPWHMRADRRKIGLLAAIVLVVAVLAAVFAALLAG*
Ga0008090_156612572	3300005363	Tropical Rainforest Soil	MSEVDNDLSADTAHFQAFADRKDEDLPAPWQMRVPGSKVWLLAAVVIVVAVLAGIIFSLIAG*
Ga0070714_1016995131	3300005435	Agricultural Soil	MSDVDNDLSADTAKFQAFAQRQDDLPAPWHMRVPGSKIGLLAAIVVGVAVLAALVAVLLIG*
Ga0070710_113664002	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MSDVDNDLSADTAKFRAFAQRQDDLPAPWHMRVPGSKIGLLAGIVVGVAVLAAIVAAVLIG*
Ga0070706_1000994823	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MSEVDNDLSADTADFQAFADRQEEDLPAPWQMRVPGSKIGLLAATVIAVAVLAGIIFSLIAG*
Ga0070706_1006385223	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MSDVDNDLSADTAKFRAFAQRQDDLPAPWHMRVPGSKIGLLAGIVVGVAVLAAIVAVLLIG*
Ga0070699_1005832933	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MSDVDNDLSADTAKFRAFAQRQDDLPAPWHMRVPGSKIGLLAGIVVGVAVLAAIVA
Ga0070737_100048299	3300005524	Surface Soil	MPEVDDDLSADTGRFRAFAQRQDDDLPEPWRMRAPGSTVGLLAAVVVAVAVLVAIAASLLT*
Ga0070730_104887822	3300005537	Surface Soil	MPDMDSDFGADTARFKAFAQRDEELPAPWRMRASGSKIGILVIAVVIAAILAAIFGTLLAG*
Ga0070733_101899202	3300005541	Surface Soil	MSDVDNDLSADTAKFQAFAQRQDDLPAPWHMRVPGSKIGLLAGIVVGVAVLAALVAVLLIG*
Ga0066905_1006191801	3300005713	Tropical Forest Soil	MSEVDNDLSADTAHFQAFADRQDEELPAPWHMRVPGSKIGLLAAIVIVVAVVAGIIFSVIAG*
Ga0066903_1000392853	3300005764	Tropical Forest Soil	MSDVDKDLSADTARFRAFAQRQDDLPAPWHMRADRRKIGLLAGIVLVVAVLAAIFAALLAG*
Ga0066903_1009960812	3300005764	Tropical Forest Soil	MSEVDNDLSADTAHFQAFADRQDEDLPAPWHMRVPGSKVWLLAAVVIVVAVLAGIIFSLIAG*
Ga0066903_1073899662	3300005764	Tropical Forest Soil	MSETDNDLSADTANFQAFADRQDEDLPAPWQMRVPGSKIGLLAAVVIVVAVVAGIIFSVIAG*
Ga0066903_1074639151	3300005764	Tropical Forest Soil	MSEVDNDLSADTAHFQAFADRQDEDLPAPWQMRVPGSKIGLLAAIVIVVAVVAGIIFSVIAG*
Ga0066903_1087034661	3300005764	Tropical Forest Soil	MSDVDNDLSADTARFQAFAQRQDDLPAPWHMRVPGSKIGLLAGIVVGVAVLAAIIAALLIG*
Ga0070766_105833322	3300005921	Soil	MSDVDNDLSADTARFQAFAQRQDDDPPAPWHMRVPGSKIGLLAGIVVGVAVLAAIVAGVLIG*
Ga0070717_104881681	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MSDVDDDLSADTAKFQAFAQRQDDLPAPWHMRVPGSKIGLLAGIVVGVAVLAAIVAAVLIG*
Ga0075017_1006361462	3300006059	Watersheds	VDNDLSADTAKFQAFAQREDDLPAPWHMRVPGSKIGLLAGIVVGVAVLAAIVAVLLIG*
Ga0075030_1003280581	3300006162	Watersheds	MSDVDNDLSADTAKFQAFAQREDDLPAPWHMRVPGSKIGLLAGIVVGVAVLAAIVA
Ga0070765_1020456002	3300006176	Soil	MSDVDNDLSADTGRFQAFAQRQDDDLPAPWHMRVPGSKIGLLAGIVVGVAVLAAIVAGVLIG*
Ga0079221_111012421	3300006804	Agricultural Soil	MSEVDNDLSADTAHFQAFADRQDEDLPAPWHMRVPGSKVWLLAAVVIVVAVLAGIIFSLI
Ga0126373_101226843	3300010048	Tropical Forest Soil	MSDVDKDLSADTARFRAFAQRQDDLPAPWHMRADRRKIGLLAGIVLVVAVLAAVFAALLAG*
Ga0126373_101227304	3300010048	Tropical Forest Soil	MADVDDDLSASTARFRAFQERTEDDLPAPWQMRAPKSKIMLLTAIVVVVAVFVGIIASLIAS*
Ga0126373_104655332	3300010048	Tropical Forest Soil	GRIMSDVDNDLSADTARFQAFAQRQDDLPAPWHMRVPGSKIGLLAGIVIGVAVLAAIVAGLLIG*
Ga0126373_115102752	3300010048	Tropical Forest Soil	MSDVDNDLSADTARFQAFAQRQDDLPAPWHMRVPGSKIGLLAGIVVGVAVLAAVFAVLLIG*
Ga0126373_115323511	3300010048	Tropical Forest Soil	LSADTAHFQAFADRQDEDLPAPWHMRVPGSKVWLLAAVVIVVAVLAGIIFSLIAG*
Ga0126373_116149232	3300010048	Tropical Forest Soil	MSDVDKDLSADTARFRAFAQRQDDLPAPWHMRAPRGRIGLLAAIVVVVAVLAAVFAALLAG*
Ga0126373_121681922	3300010048	Tropical Forest Soil	MSEVDNDLSADTAHFQAFADRQDEDLPAPWQMRVPGSKIGLLAAIVIVVAVLAGIIFSVIAG*
Ga0126373_128989752	3300010048	Tropical Forest Soil	MSDVDNDLSADTARFRAFAQRQDDLPAPWHMRVPGSKIGLLAGIVIAVAVLAAIVASLLIG*
Ga0126376_109362822	3300010359	Tropical Forest Soil	VDNDLSADTAHFQAFADRQDEDLPAPWQMRVPGSKIGLLAAIVIVVAVLAGIIFSVIAG*
Ga0126376_122451591	3300010359	Tropical Forest Soil	MSEVDDDLSASTARFRAFAQGADDDLPAPWKMRVPGTKVGLLAAIVVVVAVLVAI
Ga0126372_104124051	3300010360	Tropical Forest Soil	MSEVDNDLSADTADFQAFADRQDEDLPAPWQMRVPGSKIGLLAAIVIVVAVVAGIIFSVIAG*
Ga0126378_110700551	3300010361	Tropical Forest Soil	MSEVDNDLSADTAHFQAFADRQDEDLPAPWQMRVPGSKIGLLAAIVIVVAVLAGIIFSVI
Ga0126378_111827752	3300010361	Tropical Forest Soil	MSDVDNDLSADTARFQAFAQRQDDLPAPWHMRAPGSKIGLLAGIVVGVAVLAAIIAVLLVG*
Ga0126379_122704782	3300010366	Tropical Forest Soil	SEVDNDLSADTAHFQAFADRQDEDLPAPWHMRVPGSKVWLLAAVVIVVAVLAGIIFSLIAG*
Ga0126381_1018285132	3300010376	Tropical Forest Soil	MSDVDKDLSADTARFRAFAQRQDDLPAPWHMRAPRGRIGLLAAIVVVVAVLAAIFAALLAG*
Ga0126381_1021711062	3300010376	Tropical Forest Soil	MSDVDNDLSADTARFQAFAQRQDDLPAPWHMRVPGSKIGLLAGIVIGVAVLAAIVAGLLIG*
Ga0126381_1042614031	3300010376	Tropical Forest Soil	MADVNDDFSADTARFQAFVQRQDDEQPAAWQMRASGPRIGLLAGIVVA
Ga0134126_103588663	3300010396	Terrestrial Soil	MSDVDNDLSADTAKFQAFAQRQDDLPAPWHMRVPGSKIGLLAAIVVGVPVLA
Ga0137776_17277553	3300010937	Sediment	MSEVEDDLSANTARFQAFAQGQDEELPAPWRMRAPGSKIALLVGIVVVVAALAAIVFAFVAG*
Ga0137365_105243152	3300012201	Vadose Zone Soil	MSETDNDLSADTAHFQAFADRQDEDLPAPWQMRVPGSKIGLLAAVVIVVAVVAGIIFSVIAG*
Ga0126369_104381443	3300012971	Tropical Forest Soil	MSEVDNDLSADTAHFQAFADRKDEDLPAPWQMRVPGSKVGLLAAVVIVVAVLAGIIFSLIAG*
Ga0182033_102203232	3300016319	Soil	MSEIDNDLSADTAHFQAFADRQDEDLPAPWHMRVPGSKVWLLTAVVIVVAVLAAIIFSLIAG
Ga0182032_101500322	3300016357	Soil	MSEIDNDLSADTAHFQAFADRQDEELPAPWQMRVPGSKIGLLAAIVIVVAVLAGIIFSVIAG
Ga0187812_100023211	3300017821	Freshwater Sediment	MSEVDKDLSADTAHFQAFAQRQDDDLPAPWHMRAPGTKIGLLAAIVIVVAVLAAVLASLLAG
Ga0187812_10489941	3300017821	Freshwater Sediment	MSEVDDDLSASTARFRAFAERPEEDLPAPWKMRVPGAKIGLLAAIVVVVAVFVALLASLLAG
Ga0187807_100035113	3300017926	Freshwater Sediment	MSEVDDDLSASTARFRAFAERPEEDLPAPWKMRAPGAKIGLLAAIVVVVAVFVALLASLLAG
Ga0187807_10839572	3300017926	Freshwater Sediment	MADVDDDMSASTARFRAFAERPEEDLPAPWKMRASGSKIGLLVAIVIVVAVLAAIVASVLAH
Ga0187806_10381272	3300017928	Freshwater Sediment	MPETDDDLSASTARFRAFADRQDDLPAPWHMRVPLSKIGLLVAIVVVVAVLAAIVGIALA
Ga0187808_102984882	3300017942	Freshwater Sediment	MADVDDDLSASTARFRAFAERPEEDLPAPWKMRASGSKIGLLVAIVIVVAVLAAIVASVLAH
Ga0187783_102283992	3300017970	Tropical Peatland	MSDVDDDLSANTARFRAFAERQDDLPAPWHMRVPISKIGLLVAIVIGVAVLAAIAGILLA
Ga0187783_109724442	3300017970	Tropical Peatland	MPESDDDLSASTARFRAFAERQDDLPAPWHMRVPLSKIGLLVAIVVVVAIVAAIIGRLIA
Ga0187805_103413032	3300018007	Freshwater Sediment	MADVDDDMSASTARFRAFAERAEEDLPAPWKMRASKSKIGLLVTIVIVVAVLAAIVASLMAH
Ga0210407_107244591	3300020579	Soil	MSDVDNDLSADTAKFQAFAQRQDDLPAPWHMRVPGSKIGLLAGIVVGVAVLAALVAVLLI
Ga0210399_101063092	3300020581	Soil	VSEVDDDLSANTARFQAFAQRQEEELPAPWRMRAPGSKIAILVGIVIVVAVLAAIAASLLAG
Ga0210399_105125662	3300020581	Soil	MSDVDNDLSADTARFQAFARRQDDDLPAPWHMRVPGSKIGLLAGIVVGVAVLAAIVAGVLIG
Ga0210399_107197792	3300020581	Soil	MSDVDNDLSADTARFQAFAQRQDDDPPAPWHMRVPGSKIGLLAGIVVGVAVLAAIVAAVLIG
Ga0210395_100183455	3300020582	Soil	MVTIMSEVDKDVSADTARFQAFAQRQDDDVPAPWHMRAPGAKIGLLAVIVVVVAVLAAVLASLLAG
Ga0213881_102363192	3300021374	Exposed Rock	MSDVDNDLSADTARFRAFAQRQDDLPAPWHMRAPGGKIGLLAVIVFVVALVVGLVASLLT
Ga0210384_105242352	3300021432	Soil	MSDVDNDLSADTAKFQAFAQRQDDLPAPWHMRVPGSKIGLLAGIVIGVAVLAALVAVLLI
Ga0210398_102000622	3300021477	Soil	TMSDVDDDLSADTARFQAFAQRQDDDPPAPWHMRVPGSKIGLLAGIVVGVAVLAAIVAAVLIG
Ga0210409_107778882	3300021559	Soil	MSDVDNDLSADTARFQAFAQRQDDDPPAPWHMRVPGSKIGLLAGIVVGVAVLAAIVAAV
Ga0126371_102346053	3300021560	Tropical Forest Soil	MSDVDNDLSADTARFQAFAQRQDDLPAPWHMRVPGSKIGLLAGIVVGVAVLAAIIAVLLV
Ga0126371_104305881	3300021560	Tropical Forest Soil	MSDVDKDLSADTARFRAFAQRQDELPAPWHMRADRRKIGLLAAIVLVVAVLAAVFAA
Ga0126371_106050472	3300021560	Tropical Forest Soil	MSDVDKDLSADTARFRAFAQRQDDLPAPWHMRAPRGRIGLLAAIVVVVAVLAAIFAALLA
Ga0126371_117226301	3300021560	Tropical Forest Soil	MSEVDNDLSADTADFQAFADRQDEDLPAPWQMRVPGSKIGLLAAIVIVVAVLAGIIFSVIAG
Ga0126371_126681482	3300021560	Tropical Forest Soil	MSEVDNDLSADTAHFQAFADRQDEDLPAPWHMRVPGSKVWLLAAVVIVVAVLAGIIFSLIAG
Ga0242676_10386511	3300022512	Soil	ADTARFQAFAQRQDDDPPAPWHMRVPGSKIGLLAGIVVGVAVLAAIVAAVLIG
Ga0242669_10355022	3300022528	Soil	MSDVDNDVSADTARFQAFAQRQDDDPPAPWHMRVPGSKIGLLAGIVVGVAVLAAIVAAVLIG
Ga0242677_10867912	3300022713	Soil	SADTARFQAFAQRQDDDPPAPWHMRVPGSKIGLLAGIVVGVAVLAAIVAAVLIG
Ga0207684_100842263	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MSEVDNDLSADTADFQAFADRQEEDLPAPWQMRVPGSKIGLLAATVIAVAVLAGIIFSLIAG
Ga0257160_10335492	3300026489	Soil	MSDVDDDLSADTSRFRAFAQRQDDLPAPWHMRVPGSKIGLLAGIVVGVAVLAAIVAAVLI
Ga0257156_10896222	3300026498	Soil	MSDVDDDLSADTSRFRAFAQRQDDLPAPWHNMRVPGSKIGLLAGIVVGVAVLAAIVAAVLIG
Ga0209656_100266672	3300027812	Bog Forest Soil	MSEVDDDLSANTARFQAFAQRQEEDLPAPWRMRASGSKIGLLAAIVIVVAVLAAIVASFL
Ga0209040_105382562	3300027824	Bog Forest Soil	MSEVDDDLSANTARFQAFAQRQEEDLPAPWRMRASGSKIGLLAAIVIVVAVLAAIVA
Ga0209061_10374843	3300027968	Surface Soil	MPEVDDDLSADTGRFRAFAQRQDDDLPEPWRMRAPGSTVGLLAAVVVAVAVLVAIAASLL
Ga0170834_1135551552	3300031057	Forest Soil	GHTMSDVDDDLSADTAKFRAFAQRQDDLPAPWHMRVPGSKIGLLAGIVVGVAVLAAIVAAVLIG
Ga0170824_1166901252	3300031231	Forest Soil	MSDVDNDLSADTAKFQAFAQRQDDLPAPWHMRVPGSKIGLLAGIVVGVAVLAAIVAAVLI
Ga0318516_105807811	3300031543	Soil	MSEIDNDLSADTAHFQAFADRQDEDLPAPWQMRVPGSKIGLLAAIVIVVAVLAGIIFSVIAG
Ga0318573_104516402	3300031564	Soil	MSEIDNDLSADTAHFQAFADRQDEDLPAPWQMRVPGSKIGLLAAIVIAVAVVAGIIFSVIAG
Ga0318555_107479301	3300031640	Soil	MSDVDNDLSADTARFQAFAQRQDDLPAPWHMRVPGSKIGLLAGIVVGVAVLAAIFAVLL
Ga0318542_100391962	3300031668	Soil	MSEVDDDLSANTARFQAFAQRQDEEMPAPWQMRASGSKIGVLAGIVFVVALVVAILAYFLAG
Ga0318572_102552902	3300031681	Soil	MSEVDNDLSADTAHFQAFADRQDEDLPAPWQMRVPGSKIGLLAAIVIAVAVVAGIIFSVIAG
Ga0318572_104100682	3300031681	Soil	MSEIDNDLSADTAHFQAFADRQDEDLPAPWQMRVPGSKIGLLAAIVIVVAVLAGIIFS
Ga0310686_1169105841	3300031708	Soil	MSDVDNDLSADTARFQAFAQRQDDDPPAPWHMRVHGSKIGLLAGIVVGVAVLAAIVAAVLIG
Ga0307476_100350472	3300031715	Hardwood Forest Soil	MSDVDDDLSADTARFQAFAQRQDDDPPAPWHMRVPGSKIGLLAGIVVGVAVLAAIVAAVLIG
Ga0307474_100129666	3300031718	Hardwood Forest Soil	MSDVDDDLSADTAKFRAFAQRQDDLPAPWHMRVPGSKVGLLAGIVVGVAVLAAIVAVLLI
Ga0318493_102492222	3300031723	Soil	AKVATMSEIDNDLSADTAHFQAFADRQDEDLPAPWQMRVPGSKIGLLAAIVIVVAVVAGIIFSVIAG
Ga0306918_104853531	3300031744	Soil	MSEIDNDLSADTAHFQAFADRQDEDLPAPWQMRVPGSKIGLLAAIVIVVAVVAGIIFSVIAG
Ga0307477_101377931	3300031753	Hardwood Forest Soil	MSDVDNDLSADTAKFQAFAQRQDDLPAPWHMRVPGSKIGLLAGIVVGVAVLAAIVAGVLI
Ga0307477_106122262	3300031753	Hardwood Forest Soil	MSEVDDDLSANTGRFQAFAQRQDEELPAPWRMRASGSKIGLLAGIVIAVAVLAAIVASFLIG
Ga0307475_109862782	3300031754	Hardwood Forest Soil	MSDVDNDLSADTAKFQAFAQRQDDLPAPWHMRVPGSKVGLLAGIVVGVAVLAAIVAVLLI
Ga0318535_104357041	3300031764	Soil	MSEVDNDLSADTAHFQAFADRQDEDLPAPWHMRVPGSNVWLLAAVVIVVAVLAAIIFSLIAG
Ga0318543_105078411	3300031777	Soil	MSEVDNDLSADTAHFQAFADRQDEDLPAPWHMRVPGSKVWLLTAVVIVVAVLA
Ga0318503_100862302	3300031794	Soil	MSEVDDDLSANTARFQAFAQRQDEELPAPWQMRAPGSKIGVLAGIVFVVAIVVAIAAYFLAG
Ga0318511_100246203	3300031845	Soil	MSEVDDDLSANTARFQAFAQRQDEELPAPWQMRAPGSKIGVLAGIVFVVALVVAILAYFL
Ga0306919_103930452	3300031879	Soil	MSEVDNDLSADTAHFQAFADRQDEDLPAPWQMRVPGSKIGLLAAIVIVVAVLAGIIFSVIAG
Ga0306925_100240705	3300031890	Soil	MSEVDDDLSANTARFQAFAQRQDEELPAPWQMRAPGSKIGVLAGIVFVVALVVAILAYFLAG
Ga0306925_106219592	3300031890	Soil	VATMSEIDNDLSADTAHFQAFADRQDEDLPAPWQMRVPGSKIGLLAAIVIVVAVLAGIIFSVIAG
Ga0306925_120747452	3300031890	Soil	MSDVDNDLSADTARFQAFAQRQDDLPAPWHMRAPGSKIGLLAGIVVGVAVLAA
Ga0318551_102411351	3300031896	Soil	MSEVDNDLSADTAHFQAFADRQDEDLPAPWHMRVPGSKVWLLTAVVIVV
Ga0310912_104752712	3300031941	Soil	KVATMSEVDNDLSADTAHFQAFADRQDEDLPAPWQMRVPGSKIGLLAAIVIVVAVLAGIIFSVIAG
Ga0310913_110164012	3300031945	Soil	MSEVDNDLSADTAHFQAFADRQDEDLPAPWHMRVPGSKVWLLAAVVIVVAVLAGIIFSVIAG
Ga0310909_109457671	3300031947	Soil	IDNDLSADTAHFQAFADRQDEDLPAPWQMRVPGSKIGLLAAIVIVVAVLAGIIFSVIAG
Ga0306926_113575231	3300031954	Soil	DNDLSADTAHFQAFADRQDEDLPAPWQMRVPGSKIGLLAAIVIAVAVVAGIIFSVIAG
Ga0306926_117468762	3300031954	Soil	MSEVDNDLSADTAHFQAFADRQDEDLPAPWHMRVPGSKVWLLTAVVIVVAVLAAIIFSLIAG
Ga0318563_103544642	3300032009	Soil	ADTARFQAFAQRQDDLPAPWHMRVPGSKIGLLAGIVVGVAVLAAIFAVLLIG
Ga0318569_100454623	3300032010	Soil	SEVDNDLSADTAHFQAFADRQDEDLPAPWHMRVPGSKVWLLTAVVIVVAVLAAIIFSLIA
Ga0318558_100700282	3300032044	Soil	MSEIDNDLSADTAHFQAFADRQDEDLPAPWHMRVPGSNVWLLAAVVIVVAVLAGIIFSVIAG
Ga0318532_100665741	3300032051	Soil	MSEVDDDLSANTARFQAFAQRQDEELPAPWQMRAPGSKIGVLAGIVVVVA
Ga0318575_103398511	3300032055	Soil	MSEVDDDLSANTARFQAFAQRQDEELPAPWQMRAPGSKIGVLAGIVFVVALVVAILA
Ga0306924_103414853	3300032076	Soil	TAHFQAFADRQDEDLPAPWHMRVPGSKVWLLTAVVIVVAVLAAIIFSLIAG
Ga0306920_1031010102	3300032261	Soil	MSDVDNDLSADTARFQAFAQRQDDLPAPWHMRVPGSKIGLLAGIVVGVAVLAAIFAVLLI
Ga0335085_115205092	3300032770	Soil	MSDVDDDLSADTAKFQAFAQRQDDLPAPWHMRVPGSKIGLLAGIVVGVAVLAALVAVLLI
Ga0335085_123269412	3300032770	Soil	MSDVDNDLSADTAKFRAFAQRQDDLPAPWHMRVPGSKIGLLAGIVVGVAALAAIVAILLI
Ga0335070_114374182	3300032829	Soil	MSDVDNDLSADTAKFQAFAQRQDDLPAPWHMRVPGSKIGLLAGIVVGVAALAAIVAILLI
Ga0335074_101107485	3300032895	Soil	MSDVDNDLSADTARFQAFAQRQDDLPAPWHMRAPGGKIGLLAAIVVVVAVLVAVLASLLT
Ga0335074_101744383	3300032895	Soil	MSDVDNDFGADTARFQAFAQRQDEDLPAPWHMRVSGSKIGLLVGIVIAVAIVAAILAAVLAG
Ga0335074_106554801	3300032895	Soil	MSDVDNDFGADTARFQAFAQRQDEDLPAPWHMRVSGSKIGLLAGIVIAVAIVAAILAAVLAG
Ga0335074_107103162	3300032895	Soil	MPEVDKDVSADTARFRAFAERQDDMPAPWHMRAPGARIGLLAGIVILVAVLVGLLASLLT
Ga0335074_107458212	3300032895	Soil	MSDVDNDLSADTARFQAFAQRQDDQPAPWHMRAPGAKIGLLAGIVVVVAVLVAVLASLLT
Ga0335074_107766002	3300032895	Soil	MSDVDNDLSADTARFRAFAQRHDDDLPAPWHMRVPGSKIGLLAGIVVGVAVLAAIVAGLLIG
Ga0335074_111381591	3300032895	Soil	MSDVDNDLSADTARFQAFAQRQDDLPAPWHMRAPGAKIGLLAGIVIVVAVLVGILASLLT
Ga0335074_113043002	3300032895	Soil	MSDVDNDFSADTARFQAFAQRQDEELPAPWHMRVPGSKIGLLALIVIAVAVVAAILAGVLAG
Ga0335075_101855552	3300032896	Soil	MSDVDNDFSADTARFQAFAQRQDELPAPWHMRVPGSKIGLLAVIVIAVAVVAAIFAAVLA
Ga0335075_105595061	3300032896	Soil	SDVDNDFGADTARFQAFAQRQDEDLPAPWHMRVSGSKIGLLVGIVIGVAIVAAILAAVLA
Ga0335075_111982042	3300032896	Soil	MPEVDKDVSADTARFRAFAERQDDTPAPWHMRAPGARIGLLAGIVILVAVVVGLLASLLT
Ga0335071_102864663	3300032897	Soil	MSDVDNDLSADTAKFQAFAQRQDDLPAPWHMRVPGSKIGLLAGIVVGVAVLAAIVAILLI
Ga0335072_106358071	3300032898	Soil	SDVDNDFGADTARFQAFAQRQDEDLPAPWHMRVSGSKIGLLAGIVIAVAIVAAILAAVLA
Ga0335072_109557091	3300032898	Soil	RIMSDVDNDLSADTARFQAFAQRQDDQPAPWHMRAPGAKIGLLAGIVVVVAVLVAVLASLLT
Ga0335072_111297432	3300032898	Soil	MSEVDDDLSANTARFRAFAERQDDDLPAPWHMRVPLSKFGTLAAIVIVVAVLAAIVAYLM
Ga0335076_103207211	3300032955	Soil	MSDVDNDLSADTARFQAFARRQDDLPAPWHMRAGGNKIWLLVGIVIAVAVLLAVVASLLV
Ga0335073_105222872	3300033134	Soil	MADVDDDMSASTARFRAFAERAEEDLPAPWKMRASKSKVGLLVTIVIVVAVLAAIVASLLTH
Ga0335073_111254152	3300033134	Soil	MSDVDNDFSADTARFQAFAQRQDEELPAPWHMRVPGSKIGLLAVIVIAVAVVAAIFAAVLAG
Ga0335077_102570333	3300033158	Soil	MSDVDDDLSADTAKFQAFAQRQDDLPAPWHMRVPGSKIGLLAGIVVGVAVLAALV
Ga0310914_112001921	3300033289	Soil	TMSEIDNDLSADTAHFQAFADRQDEDLPAPWQMRVPGSKIGLLAAIVIVVAVLAGIIFSVIAG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F053397

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences