NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F053393

Metagenome / Metatranscriptome Family F053393

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F053393
Family Type Metagenome / Metatranscriptome
Number of Sequences 141
Average Sequence Length 59 residues
Representative Sequence MTMRALVSADRPVVRIWHPDNPKVYVEIQFESQAAANTAVEQLNGMLKYATGLEFGEDAP
Number of Associated Samples 106
Number of Associated Scaffolds 141

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 73.76 %
% of genes near scaffold ends (potentially truncated) 33.33 %
% of genes from short scaffolds (< 2000 bps) 91.49 %
Associated GOLD sequencing projects 98
AlphaFold2 3D model prediction Yes
3D model pTM-score0.70

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (71.631 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(15.603 % of family members)
Environment Ontology (ENVO) Unclassified
(33.333 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(68.085 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 17.05%    β-sheet: 15.91%    Coil/Unstructured: 67.05%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.70
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 141 Family Scaffolds
PF05974DUF892 12.77
PF13893RRM_5 2.13
PF02586SRAP 2.13
PF01068DNA_ligase_A_M 1.42
PF08281Sigma70_r4_2 1.42
PF05598DUF772 1.42
PF13683rve_3 1.42
PF00719Pyrophosphatase 0.71
PF00313CSD 0.71
PF07995GSDH 0.71
PF13505OMP_b-brl 0.71
PF02735Ku 0.71
PF00872Transposase_mut 0.71
PF01039Carboxyl_trans 0.71
PF01351RNase_HII 0.71

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 141 Family Scaffolds
COG3685Ferritin-like metal-binding protein YciEInorganic ion transport and metabolism [P] 12.77
COG2135ssDNA abasic site-binding protein YedK/HMCES, SRAP familyReplication, recombination and repair [L] 2.13
COG1423ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) familyReplication, recombination and repair [L] 1.42
COG1793ATP-dependent DNA ligaseReplication, recombination and repair [L] 1.42
COG0164Ribonuclease HIIReplication, recombination and repair [L] 0.71
COG0221Inorganic pyrophosphataseEnergy production and conversion [C] 0.71
COG0777Acetyl-CoA carboxylase beta subunitLipid transport and metabolism [I] 0.71
COG0825Acetyl-CoA carboxylase alpha subunitLipid transport and metabolism [I] 0.71
COG1039Ribonuclease HIIIReplication, recombination and repair [L] 0.71
COG1273Non-homologous end joining protein Ku, dsDNA break repairReplication, recombination and repair [L] 0.71
COG2133Glucose/arabinose dehydrogenase, beta-propeller foldCarbohydrate transport and metabolism [G] 0.71
COG3328Transposase (or an inactivated derivative)Mobilome: prophages, transposons [X] 0.71
COG4799Acetyl-CoA carboxylase, carboxyltransferase componentLipid transport and metabolism [I] 0.71


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A71.63 %
All OrganismsrootAll Organisms28.37 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000891|JGI10214J12806_12070657Not Available603Open in IMG/M
3300000956|JGI10216J12902_101537611Not Available923Open in IMG/M
3300000956|JGI10216J12902_111549267Not Available1086Open in IMG/M
3300002155|JGI24033J26618_1055961Not Available573Open in IMG/M
3300002568|C688J35102_118312350Not Available548Open in IMG/M
3300002568|C688J35102_118336481Not Available550Open in IMG/M
3300002568|C688J35102_119617559All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales732Open in IMG/M
3300002568|C688J35102_120958184All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales3121Open in IMG/M
3300004081|Ga0063454_100986165Not Available676Open in IMG/M
3300005093|Ga0062594_101103446Not Available776Open in IMG/M
3300005330|Ga0070690_100230053Not Available1303Open in IMG/M
3300005331|Ga0070670_100863364Not Available819Open in IMG/M
3300005334|Ga0068869_100198009Not Available1583Open in IMG/M
3300005335|Ga0070666_10135489Not Available1713Open in IMG/M
3300005337|Ga0070682_100349906All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1101Open in IMG/M
3300005338|Ga0068868_101094375Not Available733Open in IMG/M
3300005340|Ga0070689_100649338Not Available918Open in IMG/M
3300005347|Ga0070668_100536488Not Available1017Open in IMG/M
3300005353|Ga0070669_101447579Not Available597Open in IMG/M
3300005354|Ga0070675_101238819Not Available687Open in IMG/M
3300005356|Ga0070674_100846578Not Available793Open in IMG/M
3300005365|Ga0070688_100231936Not Available1306Open in IMG/M
3300005366|Ga0070659_100372535All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1201Open in IMG/M
3300005366|Ga0070659_101430242All Organisms → cellular organisms → Bacteria615Open in IMG/M
3300005438|Ga0070701_10035108All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2517Open in IMG/M
3300005455|Ga0070663_100122121All Organisms → cellular organisms → Bacteria1969Open in IMG/M
3300005455|Ga0070663_101299436Not Available642Open in IMG/M
3300005459|Ga0068867_101533253Not Available621Open in IMG/M
3300005549|Ga0070704_100703516All Organisms → cellular organisms → Bacteria896Open in IMG/M
3300005617|Ga0068859_100089720Not Available3125Open in IMG/M
3300005617|Ga0068859_102521129Not Available566Open in IMG/M
3300005834|Ga0068851_10798293Not Available586Open in IMG/M
3300005840|Ga0068870_10939436Not Available613Open in IMG/M
3300005842|Ga0068858_100117272All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2488Open in IMG/M
3300005843|Ga0068860_100193863All Organisms → cellular organisms → Bacteria1967Open in IMG/M
3300006028|Ga0070717_10037181All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria3953Open in IMG/M
3300006038|Ga0075365_10023796All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium3856Open in IMG/M
3300006051|Ga0075364_10084603All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium2100Open in IMG/M
3300006178|Ga0075367_10970645Not Available542Open in IMG/M
3300006844|Ga0075428_100603116All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1173Open in IMG/M
3300006847|Ga0075431_100672244All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1015Open in IMG/M
3300006854|Ga0075425_100326088All Organisms → cellular organisms → Bacteria1767Open in IMG/M
3300006871|Ga0075434_101106112All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria806Open in IMG/M
3300006880|Ga0075429_100630472Not Available939Open in IMG/M
3300009094|Ga0111539_10693207All Organisms → cellular organisms → Bacteria1186Open in IMG/M
3300009098|Ga0105245_10573245Not Available1153Open in IMG/M
3300009098|Ga0105245_10964855All Organisms → cellular organisms → Bacteria896Open in IMG/M
3300009148|Ga0105243_11517804Not Available694Open in IMG/M
3300009156|Ga0111538_12648933Not Available629Open in IMG/M
3300009174|Ga0105241_10233543Not Available1551Open in IMG/M
3300009176|Ga0105242_10231477Not Available1656Open in IMG/M
3300009840|Ga0126313_11848350Not Available506Open in IMG/M
3300010373|Ga0134128_11577339All Organisms → cellular organisms → Bacteria722Open in IMG/M
3300010373|Ga0134128_12169038Not Available612Open in IMG/M
3300010397|Ga0134124_11772823Not Available651Open in IMG/M
3300010397|Ga0134124_12383927Not Available570Open in IMG/M
3300010400|Ga0134122_10655783Not Available979Open in IMG/M
3300010400|Ga0134122_10967664Not Available831Open in IMG/M
3300010403|Ga0134123_12838928Not Available553Open in IMG/M
3300012212|Ga0150985_102123428Not Available1356Open in IMG/M
3300012212|Ga0150985_103937777All Organisms → cellular organisms → Bacteria1977Open in IMG/M
3300012212|Ga0150985_107415784Not Available622Open in IMG/M
3300012212|Ga0150985_110060069Not Available558Open in IMG/M
3300012212|Ga0150985_113927615Not Available1364Open in IMG/M
3300012212|Ga0150985_117273580Not Available1117Open in IMG/M
3300012212|Ga0150985_121883889Not Available983Open in IMG/M
3300012212|Ga0150985_122194206Not Available585Open in IMG/M
3300012469|Ga0150984_100663455Not Available692Open in IMG/M
3300012469|Ga0150984_107001311Not Available741Open in IMG/M
3300012469|Ga0150984_109666740Not Available914Open in IMG/M
3300012469|Ga0150984_111931521Not Available839Open in IMG/M
3300012469|Ga0150984_113924782All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1770Open in IMG/M
3300012469|Ga0150984_115137453Not Available581Open in IMG/M
3300012469|Ga0150984_120023981Not Available553Open in IMG/M
3300012915|Ga0157302_10060881All Organisms → cellular organisms → Bacteria1095Open in IMG/M
3300012939|Ga0162650_100010079Not Available1214Open in IMG/M
3300012951|Ga0164300_10151558All Organisms → cellular organisms → Bacteria1086Open in IMG/M
3300012957|Ga0164303_10278991Not Available973Open in IMG/M
3300012958|Ga0164299_11276557All Organisms → cellular organisms → Bacteria560Open in IMG/M
3300012960|Ga0164301_10354533Not Available1010Open in IMG/M
3300012961|Ga0164302_10380254Not Available955Open in IMG/M
3300012986|Ga0164304_10236242All Organisms → cellular organisms → Bacteria1217Open in IMG/M
3300012986|Ga0164304_11396930Not Available575Open in IMG/M
3300012989|Ga0164305_11391736Not Available617Open in IMG/M
3300012989|Ga0164305_11769370Not Available557Open in IMG/M
3300013296|Ga0157374_10200201Not Available1955Open in IMG/M
3300013306|Ga0163162_11815596Not Available697Open in IMG/M
3300014325|Ga0163163_10208520All Organisms → cellular organisms → Bacteria2003Open in IMG/M
3300014969|Ga0157376_10708630Not Available1012Open in IMG/M
3300015372|Ga0132256_100097915All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter → Nitrobacter winogradskyi2851Open in IMG/M
3300015373|Ga0132257_102874570Not Available628Open in IMG/M
3300015373|Ga0132257_103658236Not Available559Open in IMG/M
3300015373|Ga0132257_103866542Not Available545Open in IMG/M
3300015374|Ga0132255_104457274Not Available594Open in IMG/M
3300015374|Ga0132255_105255394Not Available548Open in IMG/M
3300018028|Ga0184608_10388458Not Available608Open in IMG/M
3300018066|Ga0184617_1263645Not Available517Open in IMG/M
3300018067|Ga0184611_1333532Not Available522Open in IMG/M
3300018073|Ga0184624_10112098All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1175Open in IMG/M
3300018073|Ga0184624_10349322Not Available662Open in IMG/M
3300018083|Ga0184628_10587891Not Available565Open in IMG/M
3300018466|Ga0190268_10957593Not Available675Open in IMG/M
3300018469|Ga0190270_10870731Not Available915Open in IMG/M
3300018469|Ga0190270_11237606Not Available786Open in IMG/M
3300018469|Ga0190270_12067896Not Available628Open in IMG/M
3300018476|Ga0190274_11624770Not Available739Open in IMG/M
3300018476|Ga0190274_11753468Not Available715Open in IMG/M
3300018476|Ga0190274_12474022Not Available616Open in IMG/M
3300018481|Ga0190271_12294034Not Available645Open in IMG/M
3300022756|Ga0222622_11306323Not Available534Open in IMG/M
3300025899|Ga0207642_10160874Not Available1205Open in IMG/M
3300025899|Ga0207642_10251104All Organisms → cellular organisms → Bacteria1004Open in IMG/M
3300025900|Ga0207710_10035990All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2181Open in IMG/M
3300025901|Ga0207688_10114113All Organisms → cellular organisms → Bacteria1571Open in IMG/M
3300025904|Ga0207647_10038459All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria3025Open in IMG/M
3300025914|Ga0207671_10660540Not Available832Open in IMG/M
3300025915|Ga0207693_10558265All Organisms → cellular organisms → Bacteria893Open in IMG/M
3300025925|Ga0207650_10768124Not Available816Open in IMG/M
3300025927|Ga0207687_10638323All Organisms → cellular organisms → Bacteria900Open in IMG/M
3300025933|Ga0207706_10538977Not Available1005Open in IMG/M
3300025934|Ga0207686_11320606Not Available592Open in IMG/M
3300025935|Ga0207709_10185137Not Available1474Open in IMG/M
3300025936|Ga0207670_10123999All Organisms → cellular organisms → Bacteria1882Open in IMG/M
3300025940|Ga0207691_11672721Not Available516Open in IMG/M
3300025941|Ga0207711_10432195All Organisms → cellular organisms → Bacteria1225Open in IMG/M
3300025945|Ga0207679_10850834All Organisms → cellular organisms → Bacteria833Open in IMG/M
3300025972|Ga0207668_10461118Not Available1086Open in IMG/M
3300026095|Ga0207676_10352604Not Available1361Open in IMG/M
3300026121|Ga0207683_11342826Not Available661Open in IMG/M
3300027907|Ga0207428_10871269Not Available637Open in IMG/M
3300028380|Ga0268265_11605296Not Available655Open in IMG/M
3300028608|Ga0247819_11005074Not Available528Open in IMG/M
3300028782|Ga0307306_10191967Not Available582Open in IMG/M
3300028819|Ga0307296_10177189Not Available1155Open in IMG/M
3300028878|Ga0307278_10022211All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2929Open in IMG/M
3300031091|Ga0308201_10308913Not Available566Open in IMG/M
3300031547|Ga0310887_10112285Not Available1371Open in IMG/M
3300032000|Ga0310903_10611485Not Available581Open in IMG/M
3300032013|Ga0310906_10143677Not Available1381Open in IMG/M
3300034150|Ga0364933_013592All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1907Open in IMG/M
3300034151|Ga0364935_0330670Not Available506Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil15.60%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere5.67%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere5.67%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil4.96%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere4.96%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere4.96%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment4.26%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere4.26%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere4.26%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere4.26%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere4.26%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil3.55%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere3.55%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil2.84%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere2.84%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere2.84%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil2.13%
Populus EndosphereHost-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere2.13%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere2.13%
SedimentEnvironmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment1.42%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere1.42%
Corn, Switchgrass And Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere1.42%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.42%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere1.42%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.42%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.71%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil0.71%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.71%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere0.71%
SoilEnvironmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil0.71%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.71%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere0.71%
Switchgrass RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere0.71%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere0.71%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000891Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soilEnvironmentalOpen in IMG/M
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300002155Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX- M7Host-AssociatedOpen in IMG/M
3300002568Grasslands soil microbial communities from Hopland, California, USA - 2EnvironmentalOpen in IMG/M
3300004081Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)EnvironmentalOpen in IMG/M
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005330Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaGEnvironmentalOpen in IMG/M
3300005331Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaGHost-AssociatedOpen in IMG/M
3300005334Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2Host-AssociatedOpen in IMG/M
3300005335Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaGHost-AssociatedOpen in IMG/M
3300005337Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaGEnvironmentalOpen in IMG/M
3300005338Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2Host-AssociatedOpen in IMG/M
3300005340Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaGEnvironmentalOpen in IMG/M
3300005347Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaGHost-AssociatedOpen in IMG/M
3300005353Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaGHost-AssociatedOpen in IMG/M
3300005354Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaGHost-AssociatedOpen in IMG/M
3300005356Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaGHost-AssociatedOpen in IMG/M
3300005365Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaGEnvironmentalOpen in IMG/M
3300005366Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaGHost-AssociatedOpen in IMG/M
3300005438Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaGEnvironmentalOpen in IMG/M
3300005455Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaGHost-AssociatedOpen in IMG/M
3300005459Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2Host-AssociatedOpen in IMG/M
3300005549Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaGEnvironmentalOpen in IMG/M
3300005617Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2Host-AssociatedOpen in IMG/M
3300005834Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2Host-AssociatedOpen in IMG/M
3300005840Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2Host-AssociatedOpen in IMG/M
3300005842Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2Host-AssociatedOpen in IMG/M
3300005843Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2Host-AssociatedOpen in IMG/M
3300006028Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaGEnvironmentalOpen in IMG/M
3300006038Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5Host-AssociatedOpen in IMG/M
3300006051Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4Host-AssociatedOpen in IMG/M
3300006178Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2Host-AssociatedOpen in IMG/M
3300006844Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2Host-AssociatedOpen in IMG/M
3300006847Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5Host-AssociatedOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006871Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3Host-AssociatedOpen in IMG/M
3300006880Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3Host-AssociatedOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009148Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaGHost-AssociatedOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009174Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaGHost-AssociatedOpen in IMG/M
3300009176Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaGHost-AssociatedOpen in IMG/M
3300009840Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105AEnvironmentalOpen in IMG/M
3300010373Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4EnvironmentalOpen in IMG/M
3300010397Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300010403Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3EnvironmentalOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012469Combined assembly of Soil carbon rhizosphereHost-AssociatedOpen in IMG/M
3300012915Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2EnvironmentalOpen in IMG/M
3300012939Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t1i015EnvironmentalOpen in IMG/M
3300012951Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MGEnvironmentalOpen in IMG/M
3300012957Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MGEnvironmentalOpen in IMG/M
3300012958Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MGEnvironmentalOpen in IMG/M
3300012960Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MGEnvironmentalOpen in IMG/M
3300012961Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MGEnvironmentalOpen in IMG/M
3300012986Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MGEnvironmentalOpen in IMG/M
3300012989Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MGEnvironmentalOpen in IMG/M
3300013296Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaGHost-AssociatedOpen in IMG/M
3300013306Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaGHost-AssociatedOpen in IMG/M
3300014325Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaGHost-AssociatedOpen in IMG/M
3300014969Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaGHost-AssociatedOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300018028Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coexEnvironmentalOpen in IMG/M
3300018066Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1EnvironmentalOpen in IMG/M
3300018067Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coexEnvironmentalOpen in IMG/M
3300018073Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1EnvironmentalOpen in IMG/M
3300018083Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1EnvironmentalOpen in IMG/M
3300018466Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 TEnvironmentalOpen in IMG/M
3300018469Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 TEnvironmentalOpen in IMG/M
3300018476Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 TEnvironmentalOpen in IMG/M
3300018481Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 TEnvironmentalOpen in IMG/M
3300022756Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1EnvironmentalOpen in IMG/M
3300025899Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025900Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025901Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)Host-AssociatedOpen in IMG/M
3300025904Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025914Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025915Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025925Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025927Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025933Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025934Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025935Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025936Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025940Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025941Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025945Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025972Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026095Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026121Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300027907Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)Host-AssociatedOpen in IMG/M
3300028380Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028608Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Xylose_Day6EnvironmentalOpen in IMG/M
3300028782Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_193EnvironmentalOpen in IMG/M
3300028819Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153EnvironmentalOpen in IMG/M
3300028878Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117EnvironmentalOpen in IMG/M
3300031091Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_355 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031547Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4EnvironmentalOpen in IMG/M
3300032000Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D3EnvironmentalOpen in IMG/M
3300032013Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3EnvironmentalOpen in IMG/M
3300034150Sediment microbial communities from East River floodplain, Colorado, United States - 25_j17EnvironmentalOpen in IMG/M
3300034151Sediment microbial communities from East River floodplain, Colorado, United States - 2_s17EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI10214J12806_1207065723300000891SoilMPIRALVSADRPVVRIWHPDDPKLYVEIQFETQAAANAAVEQLNATLQYANGLEFGEDAPS*
JGI10216J12902_10153761113300000956SoilMTMRALVSADRPVVRIWHPDNPKVYVEIQFETQDAANAAVEQLNGMLKYATGLEFGEDAPS*
JGI10216J12902_11154926723300000956SoilMMRALLSVNRPVVRLWHPDNPKLYVEIQFETQEAANAAVEQLNAMLKYAIGLEFGEDAPF
JGI24033J26618_105596123300002155Corn, Switchgrass And Miscanthus RhizosphereMAMKALVSVDRPVVRIWHPDDPKQYVELQFESQEAANXAVGHLNSALKLASGMEFGE
C688J35102_11831235013300002568SoilMAMKALVSADRPVVRIWHPDDPKQYVELQFESQEAANNAVGHLNSALKWASGMEFGEDE*
C688J35102_11833648113300002568SoilMAMKALVSADRPVVRIWHPDDPKQYVELQFESQEAANNAVGHLNNALKWASGMEFGEDE*
C688J35102_11961755913300002568SoilMLRSSKSSFMGAIMAMKALVSVDRPVVRIWHPDDPKQYVELQFESQEAANNAVGHLNSALEWASGMEFGEDE*
C688J35102_12095818453300002568SoilMRALVSSDFPVVRIWHPDKPKLYVEIRFETQAAANAAVEQLNGMLKYATGLEFGEDA*
Ga0063454_10098616523300004081SoilMTMRALVSSDLPVVRIWHPDKPKLYVEIQFETQAAANAAVEQLNGMLKYATGLEFGEDA*
Ga0062594_10110344613300005093SoilMTMRALVSADRPVVRIWHLDNPKVYVEIQFESRDAANTALEQLNGMLKYATGLEFGEDAPS*
Ga0070690_10023005313300005330Switchgrass RhizosphereMTMRALVSSDLPVVRIWHPDKPKLYVEIQFETQAAANAAVEQLNGMLKYAT
Ga0070670_10086336423300005331Switchgrass RhizosphereMAMKALVSVDRPMVRIWHPDDPKQYVELQFESQEAANNAVGHLNSALKLASGMEFGEDG*
Ga0068869_10019800913300005334Miscanthus RhizosphereMAMKALVSVDRPVVRIWHPDDPKQYVELQFESQEAANHAVGHLNSALKLASGMEFREDA*
Ga0070666_1013548923300005335Switchgrass RhizosphereMTMRALVSADRPVVRIWHPDNPKVYVEIQFESRDAANTALEQLNGMLKYATGLEFGEDAPS*
Ga0070682_10034990623300005337Corn RhizosphereMTMRALVSSDLPVVRIWHPDKSKLYVEIQFETQAAANAAVEQLNGMLKYATGLEFGEDA*
Ga0068868_10109437513300005338Miscanthus RhizosphereMTMRAMVSADRPVVRIWHLDNPKVYVEIQFESRDAANTALEQLNGMLKYATGLEFGEDAPS*
Ga0070689_10064933823300005340Switchgrass RhizosphereMAMKALVSVDRPVVRIWHPDDPKQYVELQFESQEAANNAVGHLNSALKLASGMEFREDA*
Ga0070668_10053648833300005347Switchgrass RhizosphereMAMKALVSVDRPVVRIWHPDDPKQYVELQFESQEAANNAVGHLNSALEWASGMEFGEDE*
Ga0070669_10144757913300005353Switchgrass RhizosphereMAMKALVSVDRPVVRIWHPDDPKQYVELQFESQEAANNAVGHLNSALKLASGMEFGEDG*
Ga0070675_10123881923300005354Miscanthus RhizosphereMAMKALVSVDRPVVRIWHPDDPKQYVELQFESQEAANHAVGHLNSALK
Ga0070674_10084657833300005356Miscanthus RhizosphereMAMKALVSVDRPVVRIWHPDDPKQYVELQFESQEAANHAVGHLNSALKLASG
Ga0070688_10023193613300005365Switchgrass RhizosphereMTMRALVSSDLPVVRIWHPDKPKLYVEIQFETQAAANAAVEQLNGMLKYATG
Ga0070659_10037253533300005366Corn RhizosphereMTMRALVSSDLPVVRIWHPDKPKLYVEIQFETQAAANAAVEQLNGMLKYATGLEFGED
Ga0070659_10143024213300005366Corn RhizosphereALVSADRPVVRIWHPDDPKQYVELQFESQEAANNAVGHLNSALKLASGMEFGEDG*
Ga0070701_1003510833300005438Corn, Switchgrass And Miscanthus RhizosphereMTMRALVSSDLPVVRIWHPDKPKLYVEIQFETQAAAHAAVEQLNGMLKYATGLEFGEDA*
Ga0070663_10012212123300005455Corn RhizosphereMAMKALVSVDRPVVRIWHPDDPKQYVELQFESQEAAHNAVGHLNSALKLASGMEFREDA*
Ga0070663_10129943613300005455Corn RhizospherePQRGFGMTMRALVSADRPVVRIWHLDNPKVYVEIQFESRDAANTALEQLNGMLKYATGLEFGEDAPS*
Ga0068867_10153325313300005459Miscanthus RhizosphereMAMKALVSVDRPVVRIWHPDDPKQYVELQFESQEAANNAVEQLNSVLISASGMEFGEDE*
Ga0070704_10070351623300005549Corn, Switchgrass And Miscanthus RhizosphereGAIMAMKALVSVDRPVVRIWHPDDPKQYVELQFESQEAANNAVGHLNSALKLASGMEFGEDG*
Ga0068859_10008972033300005617Switchgrass RhizosphereMTMRALVSSDLPVVRIWHPDKAKLYVEIQFETQAAANAAVEQLNGMLKYATGLEFGEDA*
Ga0068859_10252112923300005617Switchgrass RhizosphereMMMRALVSADRPVVRRWHPDHPKVYVEIQFESRDAANTALEQLNGMLKYATGLEFGEDAPS*
Ga0068851_1079829313300005834Corn RhizosphereLAAIMAMKALVSVDRPVVRIWHPDDPKQYVELQFESQEAANHAVGHLNSALKLASGMEFREDA*
Ga0068870_1093943623300005840Miscanthus RhizosphereMTMRALVSADRPVVRIWHLDNPKVYVEIQFESRDAANTALEQLNGMLK
Ga0068858_10011727233300005842Switchgrass RhizosphereMAMRALVSADRPVVRIWHLDNPKVYVEIQFESRDAANTALEQLNGMLKYATGLEFGEDAPS*
Ga0068860_10019386323300005843Switchgrass RhizosphereVSVDRPVVRIWHPDDPKQYVELQFESQEAANHAVGHLNSALKLASGMEFREDA*
Ga0070717_1003718163300006028Corn, Switchgrass And Miscanthus RhizosphereMTMLALVSSDLPVVRIWHPDKPKLYVEIQFETQAAANAAVEQLNGMLKYATGLEFGEDA*
Ga0075365_1002379643300006038Populus EndosphereMAIKALVSADRPVVRIWHPDDPKQYVELQFESQEAANNAVGHLNSALKWASGMEFGEDE*
Ga0075364_1008460333300006051Populus EndosphereMMAIKALVSADRPVVRIWHPDDPKQYVELQFESQEAANNAVGHLNSALKWASGMEFGEDE
Ga0075367_1097064513300006178Populus EndosphereVSSDLPVVRIWHPDKAKLYVEIQFETQAAANAAVEQLNGMLKYATGLEFGEDA*
Ga0075428_10060311633300006844Populus RhizosphereAWRVLVVWTAPQSEAMAIRALVSADSPVVRIWHPDDPKIYVEIQFETQAAANAAVEQLNIMLKYATGLEFGEDA*
Ga0075431_10067224423300006847Populus RhizosphereVLVVWTAPQSEAMAIRALVSADSPVVRIWHPDDPKIYVEIQFETQAAANAAVEQLNIMLKYATGLEFGEDA*
Ga0075425_10032608833300006854Populus RhizosphereMPIRALVSSDRPVVRIWHPDDPKLYVEIQFETQTAANAAVEQLNATLKHANGLEFGEDAPS*
Ga0075434_10110611213300006871Populus RhizosphereWRVLVVWTAPQSEAMAIRALVSADSPVVRIWHPDDPKIYVEIQFETQAAANAAVEQLNIMLKYATGLEFGEDA*
Ga0075429_10063047233300006880Populus RhizosphereMAIRALVSADSPVVRIWHPDDPKIYVEIQFETQAAANAAVEQLNIMLKYATGLEFGEDA*
Ga0111539_1069320713300009094Populus RhizosphereIMAMKALVSVDRPVVRIWHPDDPKQYVELQFESQEAANHAVGHLNSALKLASGMEFREDA
Ga0105245_1057324523300009098Miscanthus RhizosphereMAMKALVSVDRPVVRIWHPDDPKQYVELQFESQEAANNPVGHLNSALKWASGMEFGEDG*
Ga0105245_1096485513300009098Miscanthus RhizosphereRPVVRIWHPDDPKQYVELQFESQEAANNAVGHLNSALKLASGMEFGEDG*
Ga0105243_1151780413300009148Miscanthus RhizosphereMTMRALVSADRPIVRIWHPDNPKVYVEIQFETQAAANSAVEQLNGMLKYATGLEFGEDA*
Ga0111538_1264893313300009156Populus RhizosphereMAMKALVSADRPVVRIWHPDDPKQYVELQFENQEAANNAVGHLNSALKWAS
Ga0105241_1023354313300009174Corn RhizosphereLVSSDRTVVRLWHPDTPKLYVEIQFEKQAAATAAVEQLNGMLKYATGLEFGEDA*
Ga0105242_1023147733300009176Miscanthus RhizosphereYRGQPQRGFGMTMRALVSADRPVVRIWHPDNPKVYVEIQFESQDAANTALEQLNGMLKYATGLEFGKDAPS*
Ga0126313_1184835013300009840Serpentine SoilMAMKALVSADRPVVRIWHPDDPKQYVELQFEIQEAANNAVGHLNSALKGASGMEFGEDE*
Ga0134128_1157733923300010373Terrestrial SoilMAMKALVSVDRPMVRIWHPDDPKQYVELQFESQEAANHAVGHLNSALKLASGMEFREDA*
Ga0134128_1216903813300010373Terrestrial SoilLVSADRPVVRIWSPDDTKRYVELQFESQQAANTAVAQLNSMLKYVTEIEFGEE*
Ga0134124_1177282313300010397Terrestrial SoilDRPVVRIWSPDDTKRYVELQFESQPAANTAVAQLNSMLKYVTEIEFGEE*
Ga0134124_1238392713300010397Terrestrial SoilMTMRALVSADRPVVRIWHPDNPKVYVEIQFESQDAANTAVEQLNGMLKYATGLEFGEDAPS*
Ga0134122_1065578323300010400Terrestrial SoilMTMRALVSSDLPVVRIWHFDKPKLYVEIRFETQAAANAAVEQLNGMLKYATGLEFGEDA*
Ga0134122_1096766413300010400Terrestrial SoilMAMKALVSVDRPVVRIWHPDDPKQYVELQFESQEADNNAVGHLNSALKWASGMEFGED
Ga0134123_1283892813300010403Terrestrial SoilMAMKALVSVDRPVVRIWHPDDPKQYVELQFESQEAANNAVGHLNSALKWASGMEFREDA*
Ga0150985_10212342813300012212Avena Fatua RhizosphereMTMRALVSSDFPVVRIWHPDKPKLYVEIRFETQAAANAAVEQLNGMLKYATGLEFGEDA*
Ga0150985_10393777723300012212Avena Fatua RhizosphereMRIFRAIEDSRLQQRGIGMTMRALVSADRPVVRIWHPDNPKMYVEIEFESQDAANAAVEQLNGMLMYATGLEFGEDAQS*
Ga0150985_10741578413300012212Avena Fatua RhizosphereMTMRALVSADRPVVRIWHPDNPKVYGEIQFEGQAAANTAVEQLNGMLKYATGLEL
Ga0150985_11006006913300012212Avena Fatua RhizosphereMAMKALVSADRPVVRIWHPDDPKQYVELQFESQEAANNAVGQLNNALKLASGMVFGEDE*
Ga0150985_11392761533300012212Avena Fatua RhizosphereMTIHALVSADRPVVRIWHPLDPKVYVEVRFETQAAANAAVERLNGLLKDATGMEFGEDA*
Ga0150985_11727358023300012212Avena Fatua RhizosphereMTMRALVSADQPVVRIWHPDNPNVYVEIQFESQDAANTAVEQLNGMLRYATGLEFGEDARS*
Ga0150985_12188388923300012212Avena Fatua RhizosphereMTMRALVSADRPVVRIWHPDNPKVYVEIQFESQDAANTAVEQLNGMLKYATGLEFREDTPS*
Ga0150985_12219420623300012212Avena Fatua RhizosphereMTMRALVNADRPVVRIWHPDNPKVYVEIQFESQGAANTAVEQLNGMLKYATGLEFGEDAPS*
Ga0150984_10066345523300012469Avena Fatua RhizosphereMTMRALVSADRPVVRIWHPDDPEVYVEIQFESQEAANTAVEQLNGMLKYATGLEFGEDARS*
Ga0150984_10700131143300012469Avena Fatua RhizosphereVTIHALVSADRPVVRIWHPLDPKVYVEVRFETQAAANAAVERLNGLLKDATGMEFGEDA*
Ga0150984_10966674033300012469Avena Fatua RhizosphereMAMKALVSADRPVVRIWHPDDPKQYVELQFENHEAANNAVGHLNSALKWASGMEFGEDE*
Ga0150984_11193152123300012469Avena Fatua RhizosphereMRALVSADCPAVRIWHPDDPKLYVEIRFESQEAANTAVEQLNGMLKYATGFEFGEDAPRLYKSLP*
Ga0150984_11392478223300012469Avena Fatua RhizosphereMTMRALVSADRPVVRIWHPDNPNVYVEIQFESQDAANTAVEQLNGMLRYATGLEFGEDARS*
Ga0150984_11513745313300012469Avena Fatua RhizosphereMTMRALVSADRPVGRIWHPENPKVYGEIQFEAQAAANTAVEQLNGMLKYATGLEFGEDASS*
Ga0150984_12002398123300012469Avena Fatua RhizosphereSSTAKRDWHDDARLVSADRSVVRIWHPDNPKVYVEIQFESQGAANTAVEQLNGMLKYATGLEFGEDAPS*
Ga0157302_1006088123300012915SoilLVSADRPVVRIWSPDDAKRYVELQFESQQAANTAVEQLNSMLKYVTEIEFGEE*
Ga0162650_10001007923300012939SoilMTMRALVSADRPVVRIWHPDNPKVYVEIQFESQDAANAAVEQLNGMLKYATGLEFGEDAPS*
Ga0164300_1015155813300012951SoilMKALVSVDRPVVRIWHPDDPKQYVELQFESQEAANNAVGHLNSALKLASGMEFGEDG*
Ga0164303_1027899123300012957SoilMAMKALVSVDRPGVRIWHPDDPKQYVELQFESQEAANNAVGHLNSALKLASGMEFGEDG*
Ga0164299_1127655713300012958SoilRPVVRIWHPDDPKQYVELQFESQEAANNAVGHLNSALKWASGM*
Ga0164301_1035453323300012960SoilMTMRALVSADRPVVRIWHPDNPKVYVEIQFESQDAANTAVEQLNGTLKYATGLEFGEDAPS*
Ga0164302_1038025423300012961SoilMRALVSADRPVVRIWHPDNPKLYIEIQFESQEAANTAVEQLNGMLKYATGLEFGEDA*
Ga0164304_1023624223300012986SoilMAMKALVSVDRPVVRIWHPDDPKQYVELQFESQEAANNAVGHLNSALKWASGM*
Ga0164304_1139693023300012986SoilMMMRALVSSDLPVVRIWHPDKPKLYVEIQFETQAAANAAVEQLNGMLKYATGLEFGEDA*
Ga0164305_1139173623300012989SoilMTIRALVSADRPVVRIWSPDDPKRYVELQFETQGAANAAVEQLNVMLKYVTEIEFGEE*
Ga0164305_1176937013300012989SoilMTMRALVSADRPVVRIWHLDNPKVYVEIQFESRDAANTAVEQLNGMLKYATGLEFGEDAPS*
Ga0157374_1020020123300013296Miscanthus RhizosphereMRALVSADRPVVRIWHLDNPKVYVEIQFESQDAANTAVEQLNGMLKYATGLEFGEDAPS*
Ga0163162_1181559623300013306Switchgrass RhizosphereMAMKALVSANRPVVRIWHPDDPRQYVELQFENQQAANKAVEQLNSTLKHAVGMEFGEDE*
Ga0163163_1020852013300014325Switchgrass RhizosphereDRPVVRIWHPDDPKQYVELQFESQEAANNAVGHLNSALKLASGMEFGEDG*
Ga0157376_1070863033300014969Miscanthus RhizosphereMAMKALVSVDRPGVRIWHPDDPKQYVELHFESQEAANNAVGHLNSALKWASGM*
Ga0132256_10009791523300015372Arabidopsis RhizosphereMTMRALVSADRPVVRIWHLDNPKVYVEIQIESQDAANTAVEQLNGMLKYATGLEFREDNPS*
Ga0132257_10287457013300015373Arabidopsis RhizosphereSDLPVVRIWHPDKAKLYVEIQFETQAAANAAVEQLNGMLKYATGLEFGEDA*
Ga0132257_10365823613300015373Arabidopsis RhizosphereMTMRALVSADRPVVRIWHADDPKLYVEIQFETREAANTAVEQLNSMLKYATGLEFGEDV*
Ga0132257_10386654223300015373Arabidopsis RhizosphereMAIRALVSADSPVVRIWHPDDPKIYVEIQFETQAAANAAVEQLNIMLKYATGLEFGED
Ga0132255_10445727413300015374Arabidopsis RhizosphereMTMRALVSSDLPVVRIWHPDKPKLYVEIQFETQAAANAAVEQLNGMLKYATGLEIGEDA*
Ga0132255_10525539413300015374Arabidopsis RhizosphereMAMKALVSVDRPGVRIWHPDDPKQYVELQFESQEAANNAVGHLNSALKLASG
Ga0184608_1038845813300018028Groundwater SedimentMRALVSADRPVVRIWHPDNPRVYVEIQFESQAAANTAVEQLNGMLKYATGLEFGEDAPS
Ga0184617_126364513300018066Groundwater SedimentMVMKALVSADRPVVRIWHPDDPKQYVELQFESQEAANNAVGHLNSALKWASGMEFGEDE
Ga0184611_133353213300018067Groundwater SedimentQSGFGMTMRGLVNADRPVVRIWHPHNPRVYVEIQFESQAAANTAVEQLNGMLKYATGLEFGEDAPS
Ga0184624_1011209813300018073Groundwater SedimentMLRSSKSSFMGAIMAMKALVSVDRPVVRIWHPDDPKQYVELQFESQEAANNAVGHLNSALKWASGMEFGE
Ga0184624_1034932213300018073Groundwater SedimentMTIRALVSADRPVVRIWSPDDQKRYVELQFESQQAANTAVEQLNSMLKYVTEIEFGEE
Ga0184628_1058789113300018083Groundwater SedimentMLRSSKSSFMGAIMAMKALVSVDRPVVRIWHPDDPKQYVELQFESQEAANNAVGHLNSALEWASGMEFGEDE
Ga0190268_1095759313300018466SoilMTIRALVSADRPIVRIWHPDNPKVYVEIQFESQEAANTAVEQLYATGLEFGEDAPT
Ga0190270_1087073113300018469SoilMTMRALVSSDLPVVRIWHPDKSKLYVEIQFETQAAANAAVEQLNGMLKYATGLEFGEDA
Ga0190270_1123760613300018469SoilMAMKALVSADRPVVRIWHPDDPKQYVELQFENQQAADNAVEHLNRALKQASGMEFGEDE
Ga0190270_1206789613300018469SoilMTMRALVSADRPVVRIWHPDNPKVYVETKFESRDAANTAVEELRGMLKYATGLEFGEDAP
Ga0190274_1162477013300018476SoilMAMKALVSADRPVVRIWHPDDPKQYVELQFESQEAANNAVGHLNSALKWASGMEFGEDE
Ga0190274_1175346823300018476SoilMTMRALVSADRPVVRIWHPDNPKVYVEIQFESQDAANAAVEQLNGMLKYATGLEFGEEAP
Ga0190274_1247402213300018476SoilMRALVSSDLPVVRIWHSDKPKLYVEIRFETQAAANAAVEQLNGMLKYATGLEFGEDA
Ga0190271_1229403413300018481SoilMAMKALVSADRPVVRIWHPDDPKQYVELQFESQEAANNAVGHLDSALKWGVGDGVRGRW
Ga0222622_1130632313300022756Groundwater SedimentMAMKALVSADRPVVRIWHPDDPKQYVELQFENQEAANNAVGHLNSALKGASGMEFGEDE
Ga0207642_1016087413300025899Miscanthus RhizosphereMTMRALVSSDLPVVRIWHPDKPKLYVEIQFETQAAANAAVEQLNGMLKCSR
Ga0207642_1025110413300025899Miscanthus RhizosphereGLAAIMAMKALVSVDRPVVRIWHPDDPKQYVELQFESQEAANNAVGHLNSALKLASGMEFGEDG
Ga0207710_1003599023300025900Switchgrass RhizosphereMTMRALVSSDLPVVRIWHPDKPKLYVEIQFETQAAANAAVEQLNGMLKYATGLEFGEDA
Ga0207688_1011411343300025901Corn, Switchgrass And Miscanthus RhizosphereMAMKALVSVDRPVVRIWHPDDPKQYVELQFESQEAANHAVGHLNSALKLASGM
Ga0207647_1003845953300025904Corn RhizosphereMTMRALVSADRPVVRIWHLDNPKVYVEIQFETKDAANAAVEQLNGMLKYATGLEFGEDAP
Ga0207671_1066054023300025914Corn RhizosphereMAMKALVSVDRPVVRIWHPDDPKQYVELQFESQEAANNAVGHLNSALKLASGMEFGEDG
Ga0207693_1055826513300025915Corn, Switchgrass And Miscanthus RhizosphereMAMKALVSVDRPVVRIWHPDDPKQYVELQFESQEAANHAVGHLNSALKLASGMEFREDA
Ga0207650_1076812423300025925Switchgrass RhizosphereMAMKALVSVDRPMVRIWHPDDPKQYVELQFESQEAANNAVGHLNSALKLASGMEFGEDG
Ga0207687_1063832313300025927Miscanthus RhizosphereRPVVRIWHPDDPKQYVELQFESQEAANNAVGHLNSALKLASGMEFGEDG
Ga0207706_1053897723300025933Corn RhizosphereMTMRALVSADRPVVRIWHPDNPKVYVEIQFESQDAANTAVEQLNGMLKYATGLEFREDTP
Ga0207686_1132060613300025934Miscanthus RhizosphereMAMKALVSVDRPVVRIWHPDDPKQYVELQFESQEAANNAVEQLNSVLISAS
Ga0207709_1018513723300025935Miscanthus RhizosphereMTMRALVSSDLPVVRIWHPDKPKLYVEIQFETQAAANAAVEQQNGMLKYATGLEFGEDA
Ga0207670_1012399923300025936Switchgrass RhizosphereMAMKALVSVDRPVVRIWHPDDPKQYVELQFESQEAANNAVGHLNSALKLASGMEFREDA
Ga0207691_1167272113300025940Miscanthus RhizosphereMTMRALVSADRPVVRIWHLDNPKVYVEIQFESRDAANTALEQLNGMLKYAIPAA
Ga0207711_1043219523300025941Switchgrass RhizosphereMTMLALVSSDLPVVRIWHPDDPKQYVELQFESQEAANNAVGHLNSALKLASGMEFGEDG
Ga0207679_1085083423300025945Corn RhizosphereLAAIMAMKALVSVDRPVVRIWHPDDPKQYVELQFESQEAANNAVGHLNSALKLASGMEFGEDG
Ga0207668_1046111833300025972Switchgrass RhizosphereMTMRALVSSDLPVVRIWHPDKPKLYVEIQFETQAAANAAVEQLNGMLKYATGLEF
Ga0207676_1035260433300026095Switchgrass RhizosphereMAMKALVSVDRAVVRIWHPDDPKQYVELQFESQEAANHAVGHLNSALKLASGMEFREDA
Ga0207683_1134282623300026121Miscanthus RhizosphereMTMRALVSADRPVVRIWHLDNPKVYVEIQFESRDAANTALEQLNRMLKYATGLEFGEDAP
Ga0207428_1087126923300027907Populus RhizosphereVSSDLPVVRIWHPDKPKLYVEIQFETQAAANAAVEQLNGMLKYATGLEFGEDA
Ga0268265_1160529623300028380Switchgrass RhizosphereMTMRALVSADRPVVRIWHLDNPKVYVEIQFESRDAANTALEQLNGMLKYATGLEFGEDAP
Ga0247819_1100507423300028608SoilIGMTMRALVSADRPVVRIWHPDNPKVYVEIQFESQDAANTAVEQLNGMLRYATGLEFGEDAPS
Ga0307306_1019196723300028782SoilMAMKALVSVDRPLVRIWHPDDPKQYVELQFESQEAANNAVGHLNSALKWASGMEFGEDE
Ga0307296_1017718933300028819SoilMTMCALVSADRPVVRIWHPDNPKVYVEIQFESQAAANTAVEQLNGMLKYATGLEFGEDAP
Ga0307278_1002221153300028878SoilMTMRALVSADRPVVRIWHPDNPKVYVEIQFESQNAANTAVEQLNGMLKYATGLEFGEDAPLNLGD
Ga0308201_1030891323300031091SoilMTMRALVSADRPVVRIWHPDNPKVYVEIQFESQGAANTAVEQLNGMLKYATGLEFGED
Ga0310887_1011228523300031547SoilFVSADRPVVRLWHPDNPKLYVEIQFETQAAANAAVEQLNGMLKYATGLEIGEDA
Ga0310903_1061148513300032000SoilLVSSDLPVVRIWHPDKSKLYVEIQFETQAAANAAVEQLNGMLKYATGLEFGEDA
Ga0310906_1014367713300032013SoilMMMRALVSADRPVVRIWHPDNPKVYVEIQFESQAAANTAVEQLNGMLKYATGLEFGEDAP
Ga0364933_013592_1697_19063300034150SedimentLGVEADEGAAMTMRAFVSADRPVVRLWHPDNPKLYVEIQFETQAAANAAVEQLNGMLKYATGLEIGEDA
Ga0364935_0330670_259_4443300034151SedimentMTMRALVSADRPVVRIWHPDNPKVYVEIQFESQAAANTAVEQLNGMLKYATGLEFGEDAP


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