Metagenome Family F053374

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F053374
Family Type	Metagenome
Number of Sequences	141
Average Sequence Length	71 residues
Representative Sequence	MNAAALFPRFLVICSVILIIAGVAQIFVRPRKDKETVLEKIVNRATITALVSFAFGVAGLLYGLGIFKMPRF
Number of Associated Samples	114
Number of Associated Scaffolds	141

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	29.08 %
% of genes near scaffold ends (potentially truncated)	24.82 %
% of genes from short scaffolds (< 2000 bps)	87.23 %
Associated GOLD sequencing projects	102
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.62

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (65.248 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (9.929 % of family members)
Environment Ontology (ENVO)	Unclassified (41.844 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (53.901 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 51.00% β-sheet: 0.00% Coil/Unstructured: 49.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.62
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.62
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 141 Family Scaffolds
PF01063	Aminotran_4	56.74
PF13414	TPR_11	2.13
PF14229	DUF4332	1.42
PF07238	PilZ	1.42
PF13495	Phage_int_SAM_4	0.71
PF00069	Pkinase	0.71

COG ID	Name	Functional Category	% Frequency in 141 Family Scaffolds
COG0115	Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase	Amino acid transport and metabolism [E]	113.48
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	2.84

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	65.25 %
Unclassified	root	N/A	34.75 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	65.25 %
Unclassified	root	N/A	34.75 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	65.25 %
Unclassified	root	N/A	34.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.75 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	27.66 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	7.09 %
unclassified Bacteria	no rank	All Organisms → cellular organisms → Bacteria → unclassified Bacteria	5.67 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	2.13 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.42 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.75 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	22.70 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	5.67 %
bacterium HR11	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR11	3.55 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	2.13 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	2.13 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2.13 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1.42 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.42 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.71 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.75 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	22.70 %
bacterium HR11	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR11	3.55 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	2.13 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2.13 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	2.13 %
Anaerolineae	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae	1.42 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	1.42 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.42 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.71 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.75 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	8.51 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	4.26 %
bacterium HR11	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR11	3.55 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	2.13 %
Planctomycetales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales	2.13 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	2.13 %
unclassified Clostridia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → unclassified Clostridia	1.42 %
Anaerolineae	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae	1.42 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.42 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.71 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.75 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	8.51 %
bacterium HR11	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR11	3.55 %
Planctomycetaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae	2.13 %
Variovorax	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax	2.13 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	2.13 %
Clostridia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → unclassified Clostridia → Clostridia bacterium	1.42 %
Nannocystineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae	1.42 %
Anaerolineae	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae	1.42 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.42 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.71 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.75 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	8.51 %
bacterium HR11	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR11	3.55 %
unclassified Planctomycetaceae	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae	2.13 %
Variovorax	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax	2.13 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	2.13 %
Kofleriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae	1.42 %
Clostridia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → unclassified Clostridia → Clostridia bacterium	1.42 %
Anaerolineae	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae	1.42 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.42 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.71 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.75 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	8.51 %
bacterium HR11	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR11	3.55 %
Planctomycetaceae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	2.13 %
Variovorax	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax	2.13 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	2.13 %
Haliangium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium	1.42 %
Clostridia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → unclassified Clostridia → Clostridia bacterium	1.42 %
Anaerolineae	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae	1.42 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.42 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.71 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.75 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	8.51 %
bacterium HR11	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR11	3.55 %
Planctomycetaceae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	2.13 %
Variovorax	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax	2.13 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	2.13 %
Haliangium ochraceum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium → Haliangium ochraceum	1.42 %
Clostridia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → unclassified Clostridia → Clostridia bacterium	1.42 %
Anaerolineae	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae	1.42 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.42 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.71 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.71 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_105893382	All Organisms → cellular organisms → Bacteria → Acidobacteria	844	Open in IMG/M
3300000953\|JGI11615J12901_10416615	Not Available	910	Open in IMG/M
3300003267\|soilL1_10042247	Not Available	1274	Open in IMG/M
3300004114\|Ga0062593_100127045	Not Available	1874	Open in IMG/M
3300004114\|Ga0062593_100651924	All Organisms → cellular organisms → Bacteria	1016	Open in IMG/M
3300004114\|Ga0062593_103440664	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR11	508	Open in IMG/M
3300004463\|Ga0063356_100044572	All Organisms → cellular organisms → Bacteria → Proteobacteria	4416	Open in IMG/M
3300004463\|Ga0063356_100685930	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1405	Open in IMG/M
3300004463\|Ga0063356_101592007	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	972	Open in IMG/M
3300004633\|Ga0066395_10000896	All Organisms → cellular organisms → Bacteria	10962	Open in IMG/M
3300005093\|Ga0062594_102147562	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → unclassified Clostridia → Clostridia bacterium	602	Open in IMG/M
3300005093\|Ga0062594_102221764	Not Available	594	Open in IMG/M
3300005166\|Ga0066674_10428514	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax	608	Open in IMG/M
3300005204\|Ga0068997_10053142	All Organisms → cellular organisms → Bacteria	784	Open in IMG/M
3300005218\|Ga0068996_10016584	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1130	Open in IMG/M
3300005290\|Ga0065712_10184622	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae	1176	Open in IMG/M
3300005329\|Ga0070683_100300555	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1527	Open in IMG/M
3300005329\|Ga0070683_101135680	All Organisms → cellular organisms → Bacteria	751	Open in IMG/M
3300005332\|Ga0066388_104723961	Not Available	693	Open in IMG/M
3300005335\|Ga0070666_10683573	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	752	Open in IMG/M
3300005338\|Ga0068868_100813882	Not Available	844	Open in IMG/M
3300005338\|Ga0068868_101579449	Not Available	616	Open in IMG/M
3300005347\|Ga0070668_100803616	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	836	Open in IMG/M
3300005353\|Ga0070669_101239612	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	645	Open in IMG/M
3300005355\|Ga0070671_100638056	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	922	Open in IMG/M
3300005364\|Ga0070673_100090784	Not Available	2496	Open in IMG/M
3300005365\|Ga0070688_100032194	Not Available	3160	Open in IMG/M
3300005365\|Ga0070688_100215119	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium → Haliangium ochraceum	1352	Open in IMG/M
3300005365\|Ga0070688_101224766	Not Available	604	Open in IMG/M
3300005367\|Ga0070667_100809580	Not Available	870	Open in IMG/M
3300005438\|Ga0070701_10319838	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR11	960	Open in IMG/M
3300005451\|Ga0066681_10193394	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1215	Open in IMG/M
3300005456\|Ga0070678_101666252	Not Available	600	Open in IMG/M
3300005458\|Ga0070681_10096837	All Organisms → cellular organisms → Bacteria	2898	Open in IMG/M
3300005466\|Ga0070685_10106558	All Organisms → cellular organisms → Bacteria	1720	Open in IMG/M
3300005535\|Ga0070684_100856346	All Organisms → cellular organisms → Bacteria	851	Open in IMG/M
3300005543\|Ga0070672_101076675	Not Available	714	Open in IMG/M
3300005547\|Ga0070693_100947269	All Organisms → cellular organisms → Bacteria	648	Open in IMG/M
3300005577\|Ga0068857_101435240	Not Available	672	Open in IMG/M
3300005615\|Ga0070702_101836517	Not Available	507	Open in IMG/M
3300005764\|Ga0066903_103945749	All Organisms → cellular organisms → Bacteria	796	Open in IMG/M
3300005836\|Ga0074470_11719919	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	980	Open in IMG/M
3300005840\|Ga0068870_10404261	Not Available	889	Open in IMG/M
3300006031\|Ga0066651_10199597	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1058	Open in IMG/M
3300006196\|Ga0075422_10169647	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	882	Open in IMG/M
3300006237\|Ga0097621_101125512	All Organisms → cellular organisms → Bacteria	738	Open in IMG/M
3300006237\|Ga0097621_102352294	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	510	Open in IMG/M
3300006358\|Ga0068871_101935424	All Organisms → cellular organisms → Bacteria	561	Open in IMG/M
3300009098\|Ga0105245_12685521	Not Available	551	Open in IMG/M
3300009148\|Ga0105243_11751586	Not Available	651	Open in IMG/M
3300009156\|Ga0111538_12787922	All Organisms → cellular organisms → Bacteria	612	Open in IMG/M
3300009177\|Ga0105248_12224340	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	624	Open in IMG/M
3300009553\|Ga0105249_10306194	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium → Haliangium ochraceum	1595	Open in IMG/M
3300009609\|Ga0105347_1266854	Not Available	708	Open in IMG/M
3300009610\|Ga0105340_1446622	Not Available	577	Open in IMG/M
3300009678\|Ga0105252_10058050	All Organisms → cellular organisms → Bacteria	1480	Open in IMG/M
3300010362\|Ga0126377_11485374	Not Available	751	Open in IMG/M
3300010362\|Ga0126377_11523318	All Organisms → cellular organisms → Bacteria	743	Open in IMG/M
3300010362\|Ga0126377_12037201	All Organisms → cellular organisms → Bacteria	650	Open in IMG/M
3300010366\|Ga0126379_10199467	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1923	Open in IMG/M
3300010397\|Ga0134124_13209096	All Organisms → cellular organisms → Bacteria	501	Open in IMG/M
3300010400\|Ga0134122_10131406	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR11	2018	Open in IMG/M
3300010403\|Ga0134123_10059163	Not Available	2914	Open in IMG/M
3300010403\|Ga0134123_10914994	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	884	Open in IMG/M
3300011417\|Ga0137326_1012912	All Organisms → cellular organisms → Bacteria	1833	Open in IMG/M
3300011420\|Ga0137314_1057150	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	945	Open in IMG/M
3300011434\|Ga0137464_1198061	Not Available	611	Open in IMG/M
3300011445\|Ga0137427_10457294	Not Available	527	Open in IMG/M
3300012227\|Ga0137449_1015474	Not Available	1423	Open in IMG/M
3300012353\|Ga0137367_10024446	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	4701	Open in IMG/M
3300012469\|Ga0150984_110008961	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	701	Open in IMG/M
3300012469\|Ga0150984_111731661	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	769	Open in IMG/M
3300012469\|Ga0150984_116586437	Not Available	1338	Open in IMG/M
3300012532\|Ga0137373_10486046	Not Available	945	Open in IMG/M
3300012909\|Ga0157290_10386200	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	542	Open in IMG/M
3300012910\|Ga0157308_10130126	All Organisms → cellular organisms → Bacteria	780	Open in IMG/M
3300012912\|Ga0157306_10020139	All Organisms → cellular organisms → Bacteria	1422	Open in IMG/M
3300012961\|Ga0164302_10487294	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	867	Open in IMG/M
3300012985\|Ga0164308_10465369	All Organisms → cellular organisms → Bacteria → Acidobacteria	1050	Open in IMG/M
3300012985\|Ga0164308_11374112	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax	644	Open in IMG/M
3300013297\|Ga0157378_10875546	Not Available	928	Open in IMG/M
3300014325\|Ga0163163_12832836	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR11	541	Open in IMG/M
3300014745\|Ga0157377_10869991	All Organisms → cellular organisms → Bacteria	671	Open in IMG/M
3300014876\|Ga0180064_1017615	All Organisms → cellular organisms → Bacteria	1378	Open in IMG/M
3300014968\|Ga0157379_10746923	Not Available	921	Open in IMG/M
3300014969\|Ga0157376_12938428	Not Available	516	Open in IMG/M
3300015371\|Ga0132258_10478802	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	3108	Open in IMG/M
3300015371\|Ga0132258_10554933	All Organisms → cellular organisms → Bacteria → Proteobacteria	2879	Open in IMG/M
3300015371\|Ga0132258_10958551	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2161	Open in IMG/M
3300015373\|Ga0132257_100205100	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2337	Open in IMG/M
3300015374\|Ga0132255_102079605	Not Available	865	Open in IMG/M
3300018067\|Ga0184611_1255041	Not Available	619	Open in IMG/M
3300018083\|Ga0184628_10003788	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	7208	Open in IMG/M
3300018083\|Ga0184628_10059245	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1939	Open in IMG/M
3300018433\|Ga0066667_11627973	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR11	576	Open in IMG/M
3300018481\|Ga0190271_10162880	All Organisms → cellular organisms → Bacteria	2171	Open in IMG/M
3300019361\|Ga0173482_10196584	Not Available	823	Open in IMG/M
3300019361\|Ga0173482_10308317	Not Available	700	Open in IMG/M
3300019361\|Ga0173482_10673328	Not Available	531	Open in IMG/M
3300020000\|Ga0193692_1021203	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1550	Open in IMG/M
3300022756\|Ga0222622_10471305	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae	894	Open in IMG/M
3300022756\|Ga0222622_10533871	Not Available	841	Open in IMG/M
3300022899\|Ga0247795_1090548	Not Available	540	Open in IMG/M
3300023077\|Ga0247802_1023472	Not Available	881	Open in IMG/M
3300024187\|Ga0247672_1014191	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1265	Open in IMG/M
3300024325\|Ga0247678_1067022	Not Available	591	Open in IMG/M
3300025271\|Ga0207666_1001607	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2673	Open in IMG/M
3300025315\|Ga0207697_10035127	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2052	Open in IMG/M
3300025315\|Ga0207697_10140151	Not Available	1048	Open in IMG/M
3300025908\|Ga0207643_10162784	Not Available	1343	Open in IMG/M
3300025912\|Ga0207707_10197880	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1752	Open in IMG/M
3300025918\|Ga0207662_10045773	All Organisms → cellular organisms → Bacteria → Proteobacteria	2586	Open in IMG/M
3300025925\|Ga0207650_10396554	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	1142	Open in IMG/M
3300025926\|Ga0207659_10357850	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1212	Open in IMG/M
3300025926\|Ga0207659_11859099	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	511	Open in IMG/M
3300025931\|Ga0207644_11438410	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	579	Open in IMG/M
3300025932\|Ga0207690_10340913	Not Available	1183	Open in IMG/M
3300025933\|Ga0207706_10224679	Not Available	1643	Open in IMG/M
3300025937\|Ga0207669_11758038	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax	530	Open in IMG/M
3300025938\|Ga0207704_10987126	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → unclassified Clostridia → Clostridia bacterium	712	Open in IMG/M
3300025941\|Ga0207711_10624492	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1005	Open in IMG/M
3300025944\|Ga0207661_10875042	Not Available	827	Open in IMG/M
3300025972\|Ga0207668_11294092	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	656	Open in IMG/M
3300025986\|Ga0207658_11007552	All Organisms → cellular organisms → Bacteria	760	Open in IMG/M
3300025986\|Ga0207658_11033506	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	750	Open in IMG/M
3300026075\|Ga0207708_10199209	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1597	Open in IMG/M
3300026078\|Ga0207702_10377858	Not Available	1362	Open in IMG/M
3300027573\|Ga0208454_1076946	Not Available	777	Open in IMG/M
3300027874\|Ga0209465_10073270	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1661	Open in IMG/M
3300027880\|Ga0209481_10573498	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	584	Open in IMG/M
3300028381\|Ga0268264_10125497	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2268	Open in IMG/M
3300028381\|Ga0268264_11357832	Not Available	721	Open in IMG/M
3300031366\|Ga0307506_10110586	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	915	Open in IMG/M
3300031716\|Ga0310813_10233067	All Organisms → cellular organisms → Bacteria	1525	Open in IMG/M
3300031716\|Ga0310813_11347204	Not Available	661	Open in IMG/M
3300031720\|Ga0307469_10542718	All Organisms → cellular organisms → Bacteria	1028	Open in IMG/M
3300031847\|Ga0310907_10253950	All Organisms → cellular organisms → Bacteria	866	Open in IMG/M
3300031938\|Ga0308175_100533212	All Organisms → cellular organisms → Bacteria	1253	Open in IMG/M
3300032013\|Ga0310906_10298947	All Organisms → cellular organisms → Bacteria	1027	Open in IMG/M
3300032075\|Ga0310890_10793126	Not Available	749	Open in IMG/M
3300034819\|Ga0373958_0068719	All Organisms → cellular organisms → Bacteria	782	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	58.87%
Host-Associated	Host-Associated	41.13%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	46.10%
Plants	Host-Associated → Plants	41.13%
Aquatic	Environmental → Aquatic	12.77%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	46.10%
Rhizosphere	Host-Associated → Plants → Rhizosphere	23.40%
Rhizoplane	Host-Associated → Plants → Rhizoplane	14.89%
Sediment	Environmental → Aquatic → Sediment	11.35%
Roots	Host-Associated → Plants → Roots	2.84%
Marine	Environmental → Aquatic → Marine	1.42%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	32.62%
Soil	Host-Associated → Plants → Rhizosphere → Soil	14.89%
Loam	Environmental → Terrestrial → Soil → Loam	13.48%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	11.35%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	9.93%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	8.51%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	4.26%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	2.84%
Wetlands	Environmental → Aquatic → Marine → Wetlands	1.42%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.71%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	17.73%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	14.89%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	11.35%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	10.64%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	9.93%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	8.51%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	5.67%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.26%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	4.26%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.84%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.84%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	2.84%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.13%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	1.42%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.71%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	9.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	7.80%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	7.09%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	4.26%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.55%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	3.55%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	3.55%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	3.55%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.84%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.84%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.84%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.84%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.84%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.13%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	2.13%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	2.13%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.13%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.13%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.13%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	2.13%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	1.42%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.42%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.42%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.42%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.42%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.42%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.42%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.42%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	0.71%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.71%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.71%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.71%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.71%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.71%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.71%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.71%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.71%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.71%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000953	Soil microbial communities from Great Prairies - Kansas Corn soil	Environmental	Open in IMG/M
3300003267	Sugarcane bulk soil Sample L1	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005204	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleA_D2	Environmental	Open in IMG/M
3300005218	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqC_D2	Environmental	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005836	Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.42_YBB	Environmental	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006196	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1	Host-Associated	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009609	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT890	Environmental	Open in IMG/M
3300009610	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700	Environmental	Open in IMG/M
3300009678	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT100	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011417	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT500_2	Environmental	Open in IMG/M
3300011420	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT199_2	Environmental	Open in IMG/M
3300011434	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT814_2	Environmental	Open in IMG/M
3300011445	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT700_2	Environmental	Open in IMG/M
3300012227	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT436_2	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012909	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S149-409B-1	Environmental	Open in IMG/M
3300012910	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S198-509B-2	Environmental	Open in IMG/M
3300012912	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S163-409C-2	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014876	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT200_16_10D	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018067	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coex	Environmental	Open in IMG/M
3300018083	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300020000	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3a1	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300022899	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S016-104C-6	Environmental	Open in IMG/M
3300023077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S076-202R-6	Environmental	Open in IMG/M
3300024187	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK13	Environmental	Open in IMG/M
3300024325	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK19	Environmental	Open in IMG/M
3300025271	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S5 (SPAdes)	Environmental	Open in IMG/M
3300025315	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Host-Associated	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027573	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT100 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300031366	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 25_S	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031847	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300034819	Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_1	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1058933822	3300000364	Soil	MNAVSAFPRFLVVCSVILIIAGVAQVFVRPRRDNETVVEKLVNRATITALFSIAFGIAGLLFGLGIFKMPRF*
JGI11615J12901_104166151	3300000953	Soil	SIILMLAGVAQIFVRPRKENETVLEKIVNRATITALVSIAFAVAGLLFGLGVFKMPRF*
soilL1_100422472	3300003267	Sugarcane Root And Bulk Soil	MNAAALFPRFLVICSIILIIAGVSQVFVRPRADDETPLQKIINRSTITALVTVAFGIAGLLYGFGVFKLPRF*
Ga0062593_1001270453	3300004114	Soil	MNAVAMFPRFLIICSVILIIAGLAQVFFRPRGENETAVEKVVNRATITALVSLAFGIAGLLFGLGVLKLPRF*
Ga0062593_1006519242	3300004114	Soil	MNAGALFPRFLVICSVILIIAGVAQIFVRPRKDKETALEKVINRATITALVSLAFGIAGLLYGLGIFKMPKF*
Ga0062593_1034406642	3300004114	Soil	MSNAAALFPRFLVICSIILMLAGVAQIFVRPRKENETMLEKIVNRATITALVSIAFAVAGILFGLGVLKMPRF*
Ga0063356_1000445725	3300004463	Arabidopsis Thaliana Rhizosphere	MNAAALFPRFLIICSVILIIAGVAQVFVRPREEKETPLQKVVNRATITALISLAFGIAGLLYGLGVFKLPRF*
Ga0063356_1006859302	3300004463	Arabidopsis Thaliana Rhizosphere	MNAVAMFPRFLIICSVILIIAGLAQMFFRPRGENETAVEKIVNRSTITALFSLAFGIAGLLFGLGVFKLPRF*
Ga0063356_1015920072	3300004463	Arabidopsis Thaliana Rhizosphere	MNAVAAFPRFLVICSVILMISGIAQVFVRPRKEKETALEKIVNRSTITALVSIAFGIAGLLFGLGIFKMPRF*
Ga0066395_100008962	3300004633	Tropical Forest Soil	MNAAAVFPRFLVICSIILIIAGVTQIFVRPRGERETPLQKVINRATITALVSLAFGIAGLLYGFGVFKLPRF*
Ga0062594_1021475622	3300005093	Soil	MNAAALFPRFLIICSVILIIAGVAQVFVRPRAEKETALQKVVNRATITALISFAFGIAGLLYGLGVFKLPRF*
Ga0062594_1022217642	3300005093	Soil	MNAIAAFPRFMVICSVILLIAGVAQVFVRPRGDKETLVAKLVNRSTITALFSIAFGIAGLLFGLGILKMPRF*
Ga0066674_104285142	3300005166	Soil	VSPAAALFPKFLVICSVILIIAGLAQIFVRPRKDNETLLEKAINRATITALFSLAFGIAGLLYGLGIFKLPRF*
Ga0068997_100531422	3300005204	Natural And Restored Wetlands	MNAVAMFPRFLIICSVILIIAGLAQVFFRPRGEKETPVERFVNRSTITALFSLAFGIAGLLFGLGVLKLPRF*
Ga0068996_100165841	3300005218	Natural And Restored Wetlands	MNAVAMFPRFLIICSVILIIAGLAQVFFRPRGEKETPVERFVNRSTITALFSLAFGIAGLLFGLGV
Ga0065712_101846222	3300005290	Miscanthus Rhizosphere	MNAVAAFPRFMVICSVILLIAGVAQVFVRPRGDKETLVEKLVNRATITALFSIAFGIAGLLFGLGILKMPRF*
Ga0070683_1003005552	3300005329	Corn Rhizosphere	MNAVALFPKFLVICSVILIIAGLAQVFVRPRGERETPLQKLINRSTITALVTVAFGIAGLLFGLGVLKMPRF*
Ga0070683_1011356802	3300005329	Corn Rhizosphere	MNAVALFPKFLIICSIILIIAGTAQVFVRPRGERETPLQKLVNRSTITAVITVAFGIAGLLFGLGVFKLPRF*
Ga0066388_1047239612	3300005332	Tropical Forest Soil	LVICSVILIIAGLAQLFVRPRKDKESPLEKLVNRATITALVSLAFGIAGLLYGFGVFKLPRF*
Ga0070666_106835732	3300005335	Switchgrass Rhizosphere	MNAVVAFPRFLVICSVILIIAGVSQVFVRPRRDNETVVEKLVNRATITALFSIAFGIAGLLFGLGIFKMPRF*
Ga0068868_1008138822	3300005338	Miscanthus Rhizosphere	MNAIAAFPRFMVICSVILLIAGVAQVFVRPRGDKETLVEKLVNRATITALFSIAFGIAGLLFGLGILKMPRF*
Ga0068868_1015794491	3300005338	Miscanthus Rhizosphere	MSNAAALFPRFLVICSIILMLAGVAQIFVRPRKENETMLEKIVNRATITALVSLAFGVAGLLYGLGIFKMPSF*
Ga0070668_1008036162	3300005347	Switchgrass Rhizosphere	MNAAALFPRFLVICSVILIIAGIAQIFVRPRKDKETALEKVVNRATITALVSLAFGVAGLLYGLGIMKMPSF*
Ga0070669_1012396122	3300005353	Switchgrass Rhizosphere	MNAAALFPRFLVICSVILIIAGVAQIFVRPRKDKETVLEKIVNRATITALVSFAFGVAGLLYGLGIFKMPRF*
Ga0070671_1006380561	3300005355	Switchgrass Rhizosphere	MNAAALFPRFLIICSVILIIAGVAQVFVRPRRENETIVEKVVNRATITALFSIAFGIAGLLFGLGVFKLPRF*
Ga0070673_1000907841	3300005364	Switchgrass Rhizosphere	CSVILIIAGVAQVFVRPRAEKETALQKVVNRATITALISFAFGIAGLLYGLGVFKLPRF*
Ga0070688_1000321944	3300005365	Switchgrass Rhizosphere	RAARGRMSNAAALFPRFLVICSIILMLAGVAQIFVRPRKENETMLEKIVNRATITALVSIAFAVAGLLFGLGVLKMPRF*
Ga0070688_1002151191	3300005365	Switchgrass Rhizosphere	MNAAALFPRFLIICSVILIIAGVAQVFVRPRAEKETALQKVVNRATITALISFAFGIAGLLYGLGVFKL
Ga0070688_1012247661	3300005365	Switchgrass Rhizosphere	MNAVAAFPRFMVICSVILLIAGVAQVFVRPRGDKETLVAKLVNRSTITALFSIAFGIAGLLFGLGILKMPRF*
Ga0070667_1008095802	3300005367	Switchgrass Rhizosphere	MNAVAAFPRFLVICSVILIIAGVSQVFVRPRRDNETVVEKLVNRATITALFSIAFGIAGLLFGLGIFKMPRF*
Ga0070701_103198382	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	MNAVAMFPRFLIICSVILIIAGLAQMFFRPRGENETAVQKIVNRSTITALFSLAFGIAGLLFGLGVFKLPRF*
Ga0066681_101933941	3300005451	Soil	MSAAAVFPRFLVICSIILIIAGVGQLLVRPRSDRDTLLQKVINRATITALISLAFGLAGLLYGFGVFKLPRF*
Ga0070678_1016662521	3300005456	Miscanthus Rhizosphere	NAVAMFPRFLIICSVILIIAGLAQMFFRPRGENETAVEKIVNRSTITALFSLAFGIAGLLFGLGVFKLPRF*
Ga0070681_100968372	3300005458	Corn Rhizosphere	MNAVALFPKFLIICSIILIIAGTAQVLVRPRGERETPLQKLVNRSTITAVITVAFGIAGLLFGLGVFKLPRF*
Ga0070685_101065582	3300005466	Switchgrass Rhizosphere	MSNAAALFPRFLVICSIILMLAGVAQIFVRPRKENETMLEKIVNRATITALVSIAFAVAGLLFGLGVLKMPRF*
Ga0070684_1008563462	3300005535	Corn Rhizosphere	MNAVALFPKFLVICSVILIIAGLAQVFVRPRGERETPLQKLINRSTITALVTVAFGIAGLLFG
Ga0070672_1010766751	3300005543	Miscanthus Rhizosphere	RSGHQAPDGAVRRAGAARGRMNAAALFPRFLVICSVILIIAGIAQIFVRPRKDKETALEKVVNRATITALVSLAFGVAGLLYGLGIFKMPSF*
Ga0070693_1009472692	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	MNAVALFPKFLVICSVILIIAGVAQVFVRPRGERETQLQKIINRSTITALITVAFGIAGLLFGFGVFKLPRF*
Ga0068857_1014352401	3300005577	Corn Rhizosphere	IICSIILIIAGTAQVFVRPRGERETPLQKLVNRSTITAVITVAFGIAGLLFGLGVFKLPRF*
Ga0070702_1018365171	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	AAALFPRFLVICSIILIIAGVAQLFVRPRGDKETPLQRIINRATITALVSVAFGIAGLLFGFGVLKLPRF*
Ga0066903_1039457491	3300005764	Tropical Forest Soil	MNAVAMFPRFLVICSVILIIAGVAQLFVRPRGERETPLHKIVNRATITALLSFAFGIAGLLYGLGVFKLPRF*
Ga0074470_117199192	3300005836	Sediment (Intertidal)	MNAVAAFPRFLVICSVILIIAGVSQVFVRPRRDNETVVEKLVNRATITALFSIAFGIAGLLFGLGVFKMPRF*
Ga0068870_104042611	3300005840	Miscanthus Rhizosphere	MNAVAAFPRFMVICSVILLIAGVAQVFVRPRGDKETLVEKLVNRATITALFSIAFGIAGL
Ga0066651_101995971	3300006031	Soil	MSAAAVFPRFLVICSIILIIAGVAQIFVRPRGEGETPLQKALNRATITALVSLAFGIVGL
Ga0075422_101696472	3300006196	Populus Rhizosphere	MNAAALFPRFLVICSVILIIAGIAQIFVRPRKDKETVLEKIVNRATITALVSFAFGVAGLLYGLGIFKMPRF*
Ga0097621_1011255122	3300006237	Miscanthus Rhizosphere	MNAVTLFPRFLVICSVILIISGVAQVFVRPRGERETPLQKLINRATITALITVAFGIAGLLFGLGVLKLPRF*
Ga0097621_1023522942	3300006237	Miscanthus Rhizosphere	VNAVALFPKFLVICSVILIIAGVAQVFVRPRGERETPLQKILNRSTITAVITVAFGIAGLLFG
Ga0068871_1019354241	3300006358	Miscanthus Rhizosphere	MNAVAAFPRFLVICSVILIIAGVAQVFVRPRRENETFVEKVVNRATITALFSIAFGIAGLLFGLGIFKMPRF*
Ga0105245_126855211	3300009098	Miscanthus Rhizosphere	ICSIILIIAGVAQLFVRPRGDKESPLQRIINRATITALVSVAFGIAGLLFGFGVLKLPRF
Ga0105243_117515861	3300009148	Miscanthus Rhizosphere	GRMNAAALFPRFLVICSVILIIAGLAQMFFRPRGENETAVEKIVNRSTITALFSLAFGIAGLLFGLGVFKLPRF*
Ga0111538_127879222	3300009156	Populus Rhizosphere	MNAGALFPRFLVISSVILIIAGVAQIFVRPRKDKETALEKVVNRATITALVSLAFGIAGLLYGLGIFKMPRF*
Ga0105248_122243401	3300009177	Switchgrass Rhizosphere	CSVILMISGIAQVLVRHRKEKETVLEKIVNRSTITAMVSIAFGIAGLLFGLGILKMPRF*
Ga0105249_103061943	3300009553	Switchgrass Rhizosphere	MNAVAMFPRFLIICSVILIIAGLAQMFFRPRGENETAVEKIVNRATITALVSLAFGIAGLLFGLGVLKMPRF*
Ga0105347_12668541	3300009609	Soil	MNAAALFPRLLVICSAILIIAGVAQIFVRPRKDKETALEKVFNRASITALVSLAFGVAALLYGLGILKMTSF*
Ga0105340_14466221	3300009610	Soil	ALFPRFLVICSVILIIAGVAQIFVRPRKDKESALEKVVNRATITALVSLAFGLAGLLYGLGIFKMPSF*
Ga0105252_100580502	3300009678	Soil	MNAAALFPRFLVICSVILIIAGVAQIFVRPRKDKETVLEKIVNRASITALVSLAFGIAGLLYGLGIFKMPTF*
Ga0126377_114853742	3300010362	Tropical Forest Soil	MNAVALFPKFLVICSVILIIAGVAQVLVRPRKEKETALERVINRATITALVSLAFGIAGLLYGLGVLKLPRF*
Ga0126377_115233181	3300010362	Tropical Forest Soil	MNAAALFPRFLVICSVILIIAGVAQLLVRPRRDKETPLQKIINRATITALVSVAFGIAGLLYGFGVFKLPKF*
Ga0126377_120372011	3300010362	Tropical Forest Soil	MNAVAMFPRFLVVCSLILIIAGVAQLFVRPRKEKETPLEKIINRSTLTALVSFAFGIAGLLYGLGVFKLPRF*
Ga0126379_101994673	3300010366	Tropical Forest Soil	MNAAAVFPRFLVICSIILIIAGVTQIFVRPRGDRETPLQKVINRATITALVSLAFGIAGLLYGFGVFKLPRF*
Ga0134124_132090962	3300010397	Terrestrial Soil	MSNAAALFPRFLVICSIILMLAGVAQIFVRPRKENETMLEKIVNRATITALVSIAFAVAGLLFGL
Ga0134122_101314062	3300010400	Terrestrial Soil	MSTAAALFPRFLVICSIILMLAGVAQIFVRPRKENETMLEKIVNRATITALVSIAFAVAGILFGLGVLKMPRF*
Ga0134123_100591632	3300010403	Terrestrial Soil	MNAVAMFPRFLIICSVILIIAGLAQVFFRPRGDNETVVEKLVNRATITALVSLAFGIAGLLFGLGVFKLPRF*
Ga0134123_109149942	3300010403	Terrestrial Soil	MNAAALFPRFLVICSVILIIAGVAQVLVRPRADNETLLQKIVNRATITALVSLAFGIAGLLYGFGVFKLPRF*
Ga0137326_10129122	3300011417	Soil	MNAAALFPRFLVICSVILISAGVAQIFVRPRKDKETVLEKIVNRASITALVSLAFGIAGLLYGLGIFKMPTF*
Ga0137314_10571502	3300011420	Soil	MNAAAVFPRFLVICSVILIIAGVAQIFVRPRKDKESALEKVVNRATITALVSLAFGIAGLLYGLGIFKMPTF*
Ga0137464_11980611	3300011434	Soil	MNAAALFPRFLVICSVILIIAGIAQIFVRPRKDKETALEKVVNRATITALVSLAFGLAGLLYGLGIMKMPSF*
Ga0137427_104572942	3300011445	Soil	CSVILMIAGIAQIFVRPRKDKETALEKTVNRATITALVSLAFGLAGLLYGLGIVKMPSF*
Ga0137449_10154742	3300012227	Soil	MNAGALFPRFLVISSVILIIAGVAQIFVRPRKEKETALEKVVNRATITALVSLAFGVAGLLYGLGIFKMPRF*
Ga0137367_100244463	3300012353	Vadose Zone Soil	MNAVSAFPRFLVVCSVILIIAGVSQVFVRPRREKETLVEKIVNRATITALFSIAFGIAGLLFGLGFFKMPRF*
Ga0150984_1100089612	3300012469	Avena Fatua Rhizosphere	MNAVSAFPRFLVVCSVILIIAGVSQVFVRPRRENETLVEKVVNRATITALFSIAFGIAGLLFGLGVFKMPRF*
Ga0150984_1117316612	3300012469	Avena Fatua Rhizosphere	MNAVSAFPRFLVVSSVILIIAGVSQVFVRPRRDNETIVEKLVNRATITALFSIAFGIAGLLFGLGIFKMPRF*
Ga0150984_1165864372	3300012469	Avena Fatua Rhizosphere	MNAVTLFPRFLIICSVILIIAGVAQVLVRPRGDKETLLQKIVNRATITALVSLAFGIAGLLYGLGVFKLPRF*
Ga0137373_104860461	3300012532	Vadose Zone Soil	MNAVSAFPRFLVVCSVILIIAGVSQVFVRPRREKETLVEKIVNRATITALFSIAFGIAGLLFGLGCFKMPR
Ga0157290_103862001	3300012909	Soil	MNAAALFPRFLIICSIILLIAGVAQVFVRPRADDETPLQKIINRSTITALVTVAFGIAGLLYGLGVFKLPRF*
Ga0157308_101301262	3300012910	Soil	MNAVALFPRFMVICSIILIIAGVAQVFVRPRGDKETPLQKVINRATITALVSIAFGIAGLLYGLGVFKL
Ga0157306_100201392	3300012912	Soil	MNAAALFPRFLVICSVILIIAGIAQIFVRPRKDKETVLEKIVNRATITALVSFAFGVAGLLYGLGIFKMPKF*
Ga0164302_104872942	3300012961	Soil	MNAVSAFPRFMVICSIILLIAGVSQVFVRPRRENETLVEKLVNRATITALFSIAFGIAGLLFGLGIFKMPRF*
Ga0164308_104653692	3300012985	Soil	MNAVAAFPRFLVICSVILMISGIAQVFVRPRKEKETVLEKIVNRSTITAMVSIAFGIAGLLFGLGIFKMPRF*
Ga0164308_113741122	3300012985	Soil	MNAVAAFPRFLVICSVILIIAGVAQVFVRPRGDKETLVAKLVNRSTITALFSIAFGIAGLLFGLGIFKMPRF*
Ga0157378_108755462	3300013297	Miscanthus Rhizosphere	MSNAAALFPRFLVICSIILMLAGVAPIFVRPRKENETMLEKIVNRATITALVSIAFAVAGLLFGLGVLKMPRF*
Ga0163163_128328361	3300014325	Switchgrass Rhizosphere	MNAAALFPRFLVICSIILIIAGVAQLFVRPRGDKESPLQRIINRATITALVSVAFGIAGLLFGFGVLKLPRF*
Ga0157377_108699912	3300014745	Miscanthus Rhizosphere	MNAAALFPRFLVICSVILIIAGIAQIFVRPRKDKETALEKVVNRATITALVSLAFGVAGLLYGLGIFKMPRF*
Ga0180064_10176152	3300014876	Soil	MNAAALFPRFLVICSVILIIAGIAQIFVRPRKDKETLLEKVANRATITALVSLAFGLAGLLYGLGIVKMPSF*
Ga0157379_107469232	3300014968	Switchgrass Rhizosphere	MNAVAMFPRYLIICSVILIIAGLAQMFFRPRGENETAVEKIVNRSTITALFSLAFGIAGLLFGLGVLKLPRF*
Ga0157376_129384282	3300014969	Miscanthus Rhizosphere	MNAVAMFPRFLIICSVILIIAGVAQVFVRPRAEKETALQKVVNRATITALISFAFGIAGLLYGLGVFKLPR
Ga0132258_104788021	3300015371	Arabidopsis Rhizosphere	CSIILMLAGVAQIFVRPRKEKETMLEKVVNRATITALVSTAFAVAGLLYGLGVFKMPRF*
Ga0132258_105549331	3300015371	Arabidopsis Rhizosphere	MSNAAALFPRFLVICSIILMLAGVAQIFVRPRKENETVLEKIVNRATITAVVSIAFAVAGLLFGLGVLKMPRF*
Ga0132258_109585513	3300015371	Arabidopsis Rhizosphere	MNAAALFPRFLIICSVILIIAGVAQVFVRPRGEKETPLQKVINRATITALISVAFGIAGLLYGLGVFKLPRF*
Ga0132257_1002051002	3300015373	Arabidopsis Rhizosphere	MNAVAMFPRLLIICSVILIIAGLAQMFFRPRGENETAVQKIVNRSTITALFSLAFGIAGLLFGLGVFKLPRF*
Ga0132255_1020796052	3300015374	Arabidopsis Rhizosphere	MNAAALFPRFLIISSVILLIAGVAQVFVRPRADDETLLQKIINRSTITALVTVAFGIAGLLYGLGVFKLPRF*
Ga0184611_12550412	3300018067	Groundwater Sediment	MNAVSAFPRFLVVCSVILIIAGVAQVLVRPRRDNETVVEKLVNRATITALFSIAFGIAGLLFGLGIFKMPRF
Ga0184628_100037882	3300018083	Groundwater Sediment	MNAGALFPRFLVICSVILIIAGVAQIFVRPRKDKETALEKIINRATITALVSFAFGIAGLLYGLGIFKMPKF
Ga0184628_100592452	3300018083	Groundwater Sediment	MSAVTLFPRFLVICSVILIIAGLAQVMVRPRGDKETLLQKIVNRATITALVSLAFGIAGLLYGLGVFKLPRF
Ga0066667_116279732	3300018433	Grasslands Soil	MNAVALFPRFLVICSIILIIAGVAQLFVRPRAERETLLQKIVNRATITALVSFAFGIAGLLYGFGVFKLPRF
Ga0190271_101628802	3300018481	Soil	MNAAALFPRFLVICSVILIIAGVAQIFVRPRKDKETALEKVVNRASITALVSLAFGVAGLLYGLGIFKVPSF
Ga0173482_101965841	3300019361	Soil	MNAVAAFPRFLVICSVILMISGIAQVFVRPRKEKETALEKIVNRSTITALVSIAFGIAGLLFGLGIFKMPRF
Ga0173482_103083172	3300019361	Soil	RAAWGRMNAVAMFPRFLIICSVILIIAGLAQVFFRPRGENETAVEKVVNRATITALVSLAFGIAGLLFGLGVLKLPRF
Ga0173482_106733282	3300019361	Soil	FLVICSIILMLAGVAQIFVRPRKENETMLEKIVNRATITALVSIAFAVAGILFGLGVLKMPRF
Ga0193692_10212032	3300020000	Soil	VNAVSAFPRFLVVCSVILIIAGVSQVFVRPRRDKETVVEKLLNRATITALFSIAFGIAGLLFGLGVFKMPRF
Ga0222622_104713052	3300022756	Groundwater Sediment	MNAAALFPRFLVICSVILIIAGLAQIFVRPRKDKETVLEKIVNRATITALVSFAFGVAGLLYGLGIFKMPRF
Ga0222622_105338712	3300022756	Groundwater Sediment	MNAAALFPRFLIICSIILLISGVAQVFVRPRADNETPLQKIINRSTITALVTVAFGIAGLLYGLGVLKLPRF
Ga0247795_10905482	3300022899	Soil	RGAMNAVAAFPRFLVICSVILMISGIAQVFVRPRKEKETALEKIVNRSTITALVSIAFGIAGLLFGLGIFKMPRF
Ga0247802_10234721	3300023077	Soil	MNAVSAFPRFMVICSIILLIAGVSQVFVRPRRENETLVEKLVNRATITALFSIAFGIAGLLFGLGILKMPRF
Ga0247672_10141912	3300024187	Soil	MNAAAMFPRFLIICSIILIIAGVSQVLVRPRGEKETLLEKFVNRATITAVVSLAIGIAGLLFGLGIFKMPRF
Ga0247678_10670221	3300024325	Soil	GAARGPMNAAAMFPRFLIICSIILIIAGVSQVLVRPRGEKETLLEKFVNRATITAVVSLAIGIAGLLFGLGIFKMPRF
Ga0207666_10016072	3300025271	Corn, Switchgrass And Miscanthus Rhizosphere	MNAVAMFPRFLIICSVILIIAGLAQMFFRPRGENETAVQKIVNRSTITALFSLAFGIAGLLFGLGVFKLPRF
Ga0207697_100351272	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	MNAVAMFPRFLIICSVILIIAGLAQMFFRPRGENETAVEKIVNRSTITALFSLAFGIAGLLFGLGVFKLPRF
Ga0207697_101401512	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	MNAIAAFPRFMVICSVILLIAGVAQVFVRPRGDKETLVAKLVNRSTITALFSIAFGIAGLLFGLGILKMPRF
Ga0207643_101627842	3300025908	Miscanthus Rhizosphere	MNAVAMFPRFLIICSVILIIAGLAQVFFRPRGENETAVEKVVNRATITALVSLAFGIAGLLFGLGVLKLPRF
Ga0207707_101978803	3300025912	Corn Rhizosphere	MNAVALFPKFLIICSIILIIAGTAQVLVRPRGERETPLQKLVNRSTITAVITVAFGIAGLLFGLGVFKLPRF
Ga0207662_100457734	3300025918	Switchgrass Rhizosphere	MSNAAALFPRFLVICSIILMLAGVAQIFVRPRKENETMLEKIVNRATITALVSIAFAVAGILFGLGVLKMPRF
Ga0207650_103965542	3300025925	Switchgrass Rhizosphere	MSAVALFPRFLIICSVILIIAGVAQVFVRPRGDKETALQKIVNRATITALVSIAFGIAGLLYGLGVFKLPRF
Ga0207659_103578502	3300025926	Miscanthus Rhizosphere	MNAAALFPRFLVICSVILIIAGIAQIFVRPRKDKETALEKVVNRATITALVSLAFGVAGLLYGLGIFKMPSF
Ga0207659_118590991	3300025926	Miscanthus Rhizosphere	MNAAALFPRFLIICSVILIIAGVAQVFVRPRAEKETALQKVVNRATITALISFAFGIAG
Ga0207644_114384102	3300025931	Switchgrass Rhizosphere	MNAVSAFPRFLVVCSVILIIAGVAQVFVRPRRENETIVEKVVNRATITALFSIAFGIAGLLFGLGVFKLPRF
Ga0207690_103409132	3300025932	Corn Rhizosphere	MFPRFLIICSVILIIAGLAQMFFRPRGENETAVEKIVNRSTITALFSLAFGIAGLLFGLGVFKLPRF
Ga0207706_102246791	3300025933	Corn Rhizosphere	AAWGRMNAVAMFPRFLIICSVILIIAGLAQMFFRPRGENETAVEKIVNRSTITALFSLAFGIAGLLFGLGVFKLPRF
Ga0207669_117580381	3300025937	Miscanthus Rhizosphere	MNAAALFPRFLVICSVILIIAGIAQIFVRPRKDKETVLEKIVNRATITALVSLAFGVAGLLYGLGIMKMPSF
Ga0207704_109871262	3300025938	Miscanthus Rhizosphere	MNAAALFPRFLIICSVILIIAGVAQVFVRPRAEKETALQKVVNRATITALISFAFGIAGLLYGLGVFKLPRF
Ga0207711_106244921	3300025941	Switchgrass Rhizosphere	MSNAAALFPRFLVICSIILMLAGVAQIFVRPRKENETMLEKIVNRATITALVSIAFAVAG
Ga0207661_108750422	3300025944	Corn Rhizosphere	MNAVALFPKFLIICSIILIIAGTAQVFVRPRGERETPLQKLVNRSTITAVITVAFGIAGLLFGLGVFKLPRF
Ga0207668_112940922	3300025972	Switchgrass Rhizosphere	MNAAALFPRFLVICSVILIIAGIAQIFVRPRKDKETALEKVVNRATITALVSLAFGVAGLLYGLGIMKMPSF
Ga0207658_110075522	3300025986	Switchgrass Rhizosphere	MSNAAALFPRFLVICSIILMLAGVAQIFVRPRKENETMLEKIVNRATITALVSFAFGIAGLLYGLGVFKLPRF
Ga0207658_110335062	3300025986	Switchgrass Rhizosphere	MNAVAAFPRFLVICSVILIIAGVSQVFVRPRRDNETVVEKLVNRATITALFSIAFGIAGLLFGLGIFKMPRF
Ga0207708_101992093	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MNAGALFPRFLVICSVILIIAGVAQIFVRPRKDKETALEKVVNRATLTALVSFAFGVAGLLYGLGIFKMPRF
Ga0207702_103778582	3300026078	Corn Rhizosphere	MNAVALFPKFLVICSVILIIAGLAQVFVRPRGERETPLQKLINRSTITALVTVAFGIAGLLFGFGVFKLPRF
Ga0208454_10769462	3300027573	Soil	MNAAALFPRFLVICSVILIIAGVAQIFVRPRKDKETVLEKIVNRASITALVSLAFGIAGLLYGLGIFKMPTF
Ga0209465_100732702	3300027874	Tropical Forest Soil	MNAAAVFPRFLVICSIILIIAGVTQIFVRPRGERETPLQKVINRATITALVSLAFGIAGLLYGFGVFKLPRF
Ga0209481_105734982	3300027880	Populus Rhizosphere	MNAAALFPRFLVICSVILIIAGIAQIFVRPRKDKETVLEKIVNRATITALVSFAFGVAGLLYGLGIFKMPRF
Ga0268264_101254974	3300028381	Switchgrass Rhizosphere	MSNAAALFPRFLVICSIILMLAGVAQIFVRPRKENETMLEKIVNRATITALVSIAFAVAGLLFGLGVLKMPRF
Ga0268264_113578321	3300028381	Switchgrass Rhizosphere	WGRMNAVAMFPRFLIICSVILIIAGLAQVFFRPRGENETAVEKVVNRATITALVSLAFGIAGLLFGLGVLKLPRF
Ga0307506_101105862	3300031366	Soil	MNAVSAFPRFLVVCSVILIIAGVSQVFVRPRRDKETVVEKLLNRATITALFSIAFGIAGLLFGLGVFKMPRF
Ga0310813_102330672	3300031716	Soil	MNDAARLFPRFLVVCSVILLLAGISQIFVRPRKENETLLEKIVNRATITALVSFAFGIAGLLFGLGVLKLPRF
Ga0310813_113472042	3300031716	Soil	MNAVALFPKFLVICSVILIIAGVAQVFVRPRGERETQLQKIINRSTITALITVAFGIAGLLFGFGVFKLPRF
Ga0307469_105427182	3300031720	Hardwood Forest Soil	MSNAAALFPRFLIICSIILMLAGVSQIFVRPRKENETVLEKIINRATITALVSIAFAVAGLLFGLGVLKMPRF
Ga0310907_102539502	3300031847	Soil	MNAVAMFPRVLIICSVILIIAGLAQMFFRPRGENETAVQKIVNRSTITALFSLAFGIAGLLFGLGVFKLPRF
Ga0308175_1005332122	3300031938	Soil	MNAVALFPRFLIICSIILIIAGVAQLFVRPRAERETLLQKIINRATITALVSFAFGIAGLLYGFGVFKLPRF
Ga0310906_102989472	3300032013	Soil	MNAAALFPRFLVICSVILIIAGVAQIFVRPRKDKETVLEKVVNRATITALVSLAFGVAGLLYGLGIMKMPSF
Ga0310890_107931261	3300032075	Soil	FPRFLIICSVILIIAGLAQMFFRPRGENETAVQKIVNRSTITALFSLAFGIAGLLFGLGVFKLPRF
Ga0373958_0068719_175_393	3300034819	Rhizosphere Soil	MNAAALFPRFLVICSIILIIAGVAQLFVRPRGDKETPLQRIINRATITALVSVAFGIAGLLFGFGVLKLPRF

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F053374

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences