Metagenome / Metatranscriptome Family F053327

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F053327
Family Type	Metagenome / Metatranscriptome
Number of Sequences	141
Average Sequence Length	88 residues
Representative Sequence	VMPRLYGDRISDAESAELIAKLRARGTSDALVAANTVGKGPSRDATVATSLQARDAILLELCDWEDLDETAPSLAALRDRLAAPQQGLRII
Number of Associated Samples	93
Number of Associated Scaffolds	141

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	37.41 %
% of genes near scaffold ends (potentially truncated)	39.01 %
% of genes from short scaffolds (< 2000 bps)	87.23 %
Associated GOLD sequencing projects	86
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.65

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (70.922 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment (30.496 % of family members)
Environment Ontology (ENVO)	Unclassified (34.043 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (36.879 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 48.74% β-sheet: 3.36% Coil/Unstructured: 47.90%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.65
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.65
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 141 Family Scaffolds
PF05532	CsbD	12.06
PF01558	POR	4.96
PF01027	Bax1-I	4.96
PF04828	GFA	1.42
PF00561	Abhydrolase_1	0.71
PF07394	DUF1501	0.71
PF07311	Dodecin	0.71
PF07883	Cupin_2	0.71
PF02518	HATPase_c	0.71
PF13520	AA_permease_2	0.71
PF00082	Peptidase_S8	0.71
PF00482	T2SSF	0.71
PF02274	ADI	0.71
PF00919	UPF0004	0.71
PF00005	ABC_tran	0.71
PF02826	2-Hacid_dh_C	0.71
PF00027	cNMP_binding	0.71
PF07452	CHRD	0.71
PF00196	GerE	0.71
PF13561	adh_short_C2	0.71
PF00201	UDPGT	0.71

COG ID	Name	Functional Category	% Frequency in 141 Family Scaffolds
COG3237	Uncharacterized conserved protein YjbJ, UPF0337 family	Function unknown [S]	12.06
COG1014	Pyruvate:ferredoxin oxidoreductase or related 2-oxoacid:ferredoxin oxidoreductase, gamma subunit	Energy production and conversion [C]	4.96
COG1819	UDP:flavonoid glycosyltransferase YjiC, YdhE family	Carbohydrate transport and metabolism [G]	1.42
COG3791	Uncharacterized conserved protein	Function unknown [S]	1.42
COG0621	tRNA A37 methylthiotransferase MiaB	Translation, ribosomal structure and biogenesis [J]	0.71
COG1834	N-Dimethylarginine dimethylaminohydrolase	Amino acid transport and metabolism [E]	0.71
COG2235	Arginine deiminase	Amino acid transport and metabolism [E]	0.71
COG3360	Flavin-binding protein dodecin	General function prediction only [R]	0.71
COG4874	Uncharacterized conserved protein	Function unknown [S]	0.71

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.92 %
All Organisms	root	All Organisms	29.08 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.92 %
cellular organisms	root	All Organisms → cellular organisms	29.08 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.92 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	29.08 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.92 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	21.28 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.71 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.92 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	19.86 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.71 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.92 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	7.80 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	1.42 %
Rubrobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria	1.42 %
Patescibacteria group	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group	0.71 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.92 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	6.38 %
Gaiellales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales	1.42 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1.42 %
Parcubacteria group	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group	0.71 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.92 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	6.38 %
Gaiellaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae	1.42 %
unclassified Parcubacteria group	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group	0.71 %
unclassified Solirubrobacterales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales	0.71 %
Nannocystineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.92 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	6.38 %
Gaiella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella	1.42 %
Parcubacteria group bacterium GW2011_GWA2_45_30	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group → Parcubacteria group bacterium GW2011_GWA2_45_30	0.71 %
Solirubrobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	0.71 %
Nannocystaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Nannocystaceae	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.92 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	6.38 %
Gaiella occulta	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta	1.42 %
Nannocystis	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Nannocystaceae → Nannocystis	0.71 %
Parcubacteria group bacterium GW2011_GWA2_45_30	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group → Parcubacteria group bacterium GW2011_GWA2_45_30	0.71 %
Solirubrobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.92 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	6.38 %
Gaiella occulta	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta	1.42 %
Nannocystis exedens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Nannocystaceae → Nannocystis → Nannocystis exedens	0.71 %
Parcubacteria group bacterium GW2011_GWA2_45_30	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group → Parcubacteria group bacterium GW2011_GWA2_45_30	0.71 %
Solirubrobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	0.71 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001213\|JGIcombinedJ13530_103607109	Not Available	571	Open in IMG/M
3300002568\|C688J35102_118221615	Not Available	540	Open in IMG/M
3300004778\|Ga0062383_10380714	Not Available	691	Open in IMG/M
3300004779\|Ga0062380_10029938	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1714	Open in IMG/M
3300004779\|Ga0062380_10113199	Not Available	1022	Open in IMG/M
3300005329\|Ga0070683_102449199	Not Available	500	Open in IMG/M
3300005331\|Ga0070670_100976279	Not Available	770	Open in IMG/M
3300005334\|Ga0068869_102010302	Not Available	519	Open in IMG/M
3300005354\|Ga0070675_100374176	Not Available	1267	Open in IMG/M
3300005356\|Ga0070674_101938648	Not Available	536	Open in IMG/M
3300005366\|Ga0070659_100765402	Not Available	838	Open in IMG/M
3300005456\|Ga0070678_100150446	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta	1874	Open in IMG/M
3300005841\|Ga0068863_102324530	Not Available	546	Open in IMG/M
3300006050\|Ga0075028_100149904	Not Available	1230	Open in IMG/M
3300006059\|Ga0075017_100026723	All Organisms → cellular organisms → Bacteria	3783	Open in IMG/M
3300006102\|Ga0075015_100703360	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	600	Open in IMG/M
3300006354\|Ga0075021_10573168	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	719	Open in IMG/M
3300006953\|Ga0074063_12333282	Not Available	528	Open in IMG/M
3300006953\|Ga0074063_13033076	Not Available	858	Open in IMG/M
3300007521\|Ga0105044_10155326	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2411	Open in IMG/M
3300009148\|Ga0105243_10663462	Not Available	1012	Open in IMG/M
3300009148\|Ga0105243_12567164	Not Available	549	Open in IMG/M
3300009176\|Ga0105242_12961079	Not Available	525	Open in IMG/M
3300009177\|Ga0105248_11812440	Not Available	692	Open in IMG/M
3300009527\|Ga0114942_1486614	Not Available	510	Open in IMG/M
3300012906\|Ga0157295_10029886	Not Available	1168	Open in IMG/M
3300012908\|Ga0157286_10478197	Not Available	501	Open in IMG/M
3300012958\|Ga0164299_10641980	Not Available	733	Open in IMG/M
3300012984\|Ga0164309_10430465	Not Available	992	Open in IMG/M
3300012984\|Ga0164309_11634425	Not Available	552	Open in IMG/M
3300014317\|Ga0075343_1197782	Not Available	523	Open in IMG/M
3300014322\|Ga0075355_1146618	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Nannocystaceae → Nannocystis → Nannocystis exedens	623	Open in IMG/M
3300014322\|Ga0075355_1161016	Not Available	602	Open in IMG/M
3300014325\|Ga0163163_12071320	Not Available	629	Open in IMG/M
3300014325\|Ga0163163_12989790	Not Available	527	Open in IMG/M
3300014326\|Ga0157380_11394906	Not Available	751	Open in IMG/M
3300014968\|Ga0157379_10640776	Not Available	994	Open in IMG/M
3300014969\|Ga0157376_10196654	Not Available	1853	Open in IMG/M
3300015163\|Ga0167665_1006891	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2349	Open in IMG/M
3300015189\|Ga0167667_1013643	All Organisms → cellular organisms → Bacteria	2378	Open in IMG/M
3300015189\|Ga0167667_1019472	Not Available	1889	Open in IMG/M
3300015189\|Ga0167667_1075718	Not Available	717	Open in IMG/M
3300015208\|Ga0167664_1097618	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	903	Open in IMG/M
3300015371\|Ga0132258_12105256	Not Available	1418	Open in IMG/M
3300015372\|Ga0132256_103589425	Not Available	522	Open in IMG/M
3300015374\|Ga0132255_104500051	Not Available	591	Open in IMG/M
3300018073\|Ga0184624_10324718	Not Available	689	Open in IMG/M
3300018081\|Ga0184625_10509065	Not Available	606	Open in IMG/M
3300018476\|Ga0190274_10045876	Not Available	3120	Open in IMG/M
3300018476\|Ga0190274_12822428	Not Available	582	Open in IMG/M
3300018476\|Ga0190274_13387881	Not Available	537	Open in IMG/M
3300018481\|Ga0190271_10058855	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3323	Open in IMG/M
3300018481\|Ga0190271_10523597	Not Available	1299	Open in IMG/M
3300020186\|Ga0163153_10081396	All Organisms → cellular organisms → Bacteria	2012	Open in IMG/M
3300020213\|Ga0163152_10400423	Not Available	654	Open in IMG/M
3300021470\|Ga0194051_1054254	All Organisms → cellular organisms → Bacteria	1482	Open in IMG/M
3300023264\|Ga0247772_1101878	Not Available	619	Open in IMG/M
3300025932\|Ga0207690_10905571	Not Available	732	Open in IMG/M
3300025934\|Ga0207686_10788847	Not Available	761	Open in IMG/M
3300025934\|Ga0207686_11681845	Not Available	525	Open in IMG/M
3300025938\|Ga0207704_11677713	Not Available	546	Open in IMG/M
3300025938\|Ga0207704_11771171	Not Available	531	Open in IMG/M
3300025940\|Ga0207691_10552060	Not Available	977	Open in IMG/M
3300025945\|Ga0207679_10951201	Not Available	787	Open in IMG/M
3300026121\|Ga0207683_11081164	Not Available	744	Open in IMG/M
3300027831\|Ga0209797_10036762	All Organisms → cellular organisms → Bacteria	2211	Open in IMG/M
3300027831\|Ga0209797_10184455	Not Available	891	Open in IMG/M
3300027831\|Ga0209797_10408507	Not Available	550	Open in IMG/M
3300027843\|Ga0209798_10195421	Not Available	999	Open in IMG/M
3300027870\|Ga0209023_10082590	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta	2323	Open in IMG/M
3300027894\|Ga0209068_10009851	All Organisms → cellular organisms → Bacteria	4520	Open in IMG/M
3300027894\|Ga0209068_10251973	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	982	Open in IMG/M
3300027897\|Ga0209254_10113316	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	2260	Open in IMG/M
3300027897\|Ga0209254_10157687	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1853	Open in IMG/M
3300027900\|Ga0209253_10584762	Not Available	821	Open in IMG/M
3300027902\|Ga0209048_10014199	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	7053	Open in IMG/M
3300028712\|Ga0307285_10043796	Not Available	1103	Open in IMG/M
3300028732\|Ga0302264_1103926	Not Available	678	Open in IMG/M
3300028754\|Ga0307297_10139279	Not Available	822	Open in IMG/M
3300028802\|Ga0307503_10102645	Not Available	1221	Open in IMG/M
3300028855\|Ga0302257_1100266	Not Available	644	Open in IMG/M
3300028869\|Ga0302263_10199467	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	797	Open in IMG/M
3300029984\|Ga0311332_11297937	Not Available	588	Open in IMG/M
3300029990\|Ga0311336_10683514	Not Available	879	Open in IMG/M
3300030002\|Ga0311350_10454224	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1150	Open in IMG/M
3300030294\|Ga0311349_11989065	Not Available	535	Open in IMG/M
3300031232\|Ga0302323_100782099	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1048	Open in IMG/M
3300031232\|Ga0302323_100901621	Not Available	977	Open in IMG/M
3300031232\|Ga0302323_102317570	Not Available	612	Open in IMG/M
3300031366\|Ga0307506_10117604	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	894	Open in IMG/M
3300031726\|Ga0302321_100440635	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group → Parcubacteria group bacterium GW2011_GWA2_45_30	1426	Open in IMG/M
3300031726\|Ga0302321_102051722	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	664	Open in IMG/M
3300031834\|Ga0315290_10023085	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	4845	Open in IMG/M
3300031834\|Ga0315290_10512393	Not Available	1046	Open in IMG/M
3300031834\|Ga0315290_10528468	Not Available	1028	Open in IMG/M
3300031834\|Ga0315290_10575930	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	979	Open in IMG/M
3300031834\|Ga0315290_11127082	Not Available	655	Open in IMG/M
3300031834\|Ga0315290_11277935	Not Available	606	Open in IMG/M
3300031834\|Ga0315290_11675962	Not Available	511	Open in IMG/M
3300031873\|Ga0315297_10332103	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1271	Open in IMG/M
3300031873\|Ga0315297_10932957	Not Available	720	Open in IMG/M
3300031873\|Ga0315297_11333836	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	584	Open in IMG/M
3300031902\|Ga0302322_100087723	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3203	Open in IMG/M
3300031902\|Ga0302322_100198944	All Organisms → cellular organisms → Bacteria	2189	Open in IMG/M
3300031918\|Ga0311367_11726929	Not Available	609	Open in IMG/M
3300031997\|Ga0315278_10877592	Not Available	901	Open in IMG/M
3300031997\|Ga0315278_10943624	Not Available	863	Open in IMG/M
3300031997\|Ga0315278_11530934	Not Available	640	Open in IMG/M
3300031997\|Ga0315278_12146597	Not Available	518	Open in IMG/M
3300031999\|Ga0315274_11728022	Not Available	579	Open in IMG/M
3300032018\|Ga0315272_10068636	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1616	Open in IMG/M
3300032018\|Ga0315272_10510251	Not Available	601	Open in IMG/M
3300032143\|Ga0315292_10551871	Not Available	971	Open in IMG/M
3300032143\|Ga0315292_10750601	Not Available	819	Open in IMG/M
3300032156\|Ga0315295_11184996	Not Available	750	Open in IMG/M
3300032156\|Ga0315295_11350588	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	693	Open in IMG/M
3300032163\|Ga0315281_11134958	Not Available	784	Open in IMG/M
3300032163\|Ga0315281_11380260	Not Available	695	Open in IMG/M
3300032164\|Ga0315283_10506190	Not Available	1312	Open in IMG/M
3300032164\|Ga0315283_11421931	Not Available	714	Open in IMG/M
3300032164\|Ga0315283_11564664	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	672	Open in IMG/M
3300032164\|Ga0315283_12132254	Not Available	553	Open in IMG/M
3300032173\|Ga0315268_10798222	Not Available	945	Open in IMG/M
3300032173\|Ga0315268_10962456	All Organisms → cellular organisms → Bacteria → Terrabacteria group	859	Open in IMG/M
3300032177\|Ga0315276_11582127	Not Available	680	Open in IMG/M
3300032177\|Ga0315276_11610634	Not Available	673	Open in IMG/M
3300032256\|Ga0315271_10184348	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1661	Open in IMG/M
3300032256\|Ga0315271_10185267	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1657	Open in IMG/M
3300032256\|Ga0315271_10624715	Not Available	922	Open in IMG/M
3300032256\|Ga0315271_10916435	Not Available	756	Open in IMG/M
3300032256\|Ga0315271_11756867	Not Available	532	Open in IMG/M
3300032275\|Ga0315270_10782555	Not Available	627	Open in IMG/M
3300032342\|Ga0315286_11407054	Not Available	672	Open in IMG/M
3300032397\|Ga0315287_10092931	All Organisms → cellular organisms → Bacteria	3415	Open in IMG/M
3300032397\|Ga0315287_10284207	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1947	Open in IMG/M
3300032397\|Ga0315287_10715553	Not Available	1182	Open in IMG/M
3300032516\|Ga0315273_13047523	Not Available	523	Open in IMG/M
3300032516\|Ga0315273_13218852	Not Available	505	Open in IMG/M
3300033482\|Ga0316627_100845162	All Organisms → cellular organisms → Bacteria	871	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	80.85%
Host-Associated	Host-Associated	19.15%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	49.65%
Terrestrial	Environmental → Terrestrial	31.21%
Plants	Host-Associated → Plants	19.15%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	42.55%
Soil	Environmental → Terrestrial → Soil	19.15%
Rhizosphere	Host-Associated → Plants → Rhizosphere	12.06%
Peat	Environmental → Terrestrial → Peat	11.35%
Sediment	Environmental → Aquatic → Sediment	6.38%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.67%
Roots	Host-Associated → Plants → Roots	1.42%
Marine	Environmental → Aquatic → Marine	0.71%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.71%

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	32.62%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	14.89%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	11.35%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	6.38%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.38%
Soil	Host-Associated → Plants → Rhizosphere → Soil	5.67%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	4.96%
Lentic	Environmental → Aquatic → Freshwater → Lentic	3.55%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.84%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.84%
Loam	Environmental → Terrestrial → Soil → Loam	1.42%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.42%
Soil	Host-Associated → Plants → Rhizoplane → Soil	1.42%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.42%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.71%
Ice	Environmental → Aquatic → Freshwater → Ice	0.71%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.71%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.71%

Habitat	Taxonomy	Distribution
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	30.50%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	14.89%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	11.35%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	6.38%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.38%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	5.67%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	4.96%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	2.84%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.84%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.84%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	2.13%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.42%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	1.42%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.42%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	0.71%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.71%
Glacial Lake	Environmental → Aquatic → Freshwater → Ice → Glacial Lake	0.71%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	0.71%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.71%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.71%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.71%

Habitat	Taxonomy	Distribution
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	30.50%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	11.35%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	9.93%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	4.96%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	4.96%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	3.55%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.55%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	2.84%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	2.13%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.13%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.13%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.13%
Freshwater Microbial Mat	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Microbial Mat	1.42%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.42%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.42%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	1.42%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	1.42%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.42%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater And Sediment	0.71%
Anoxic Zone Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Zone Freshwater	0.71%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater	0.71%
Freshwater	Environmental → Aquatic → Freshwater → Ice → Glacial Lake → Freshwater	0.71%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	0.71%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.71%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.71%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.71%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.71%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.71%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.71%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.71%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.71%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.71%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001213	Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004778	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare3Fresh	Environmental	Open in IMG/M
3300004779	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare3Fresh	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300006953	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300007521	Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - MAT-01	Environmental	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009527	Groundwater microbial communities from Cold Creek, Nevada to study Microbial Dark Matter (Phase II) - Lower Cold Creek	Environmental	Open in IMG/M
3300012906	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S212-509R-1	Environmental	Open in IMG/M
3300012908	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S089-202R-1	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300014317	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqB_D1	Environmental	Open in IMG/M
3300014322	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - WestPond_CattailA_D1	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015163	Arctic soil microbial communities from a glacier forefield, Rabots glacier, Tarfala, Sweden (Sample Rb1b, glacier snout)	Environmental	Open in IMG/M
3300015189	Arctic soil microbial communities from a glacier forefield, Rabots glacier, Tarfala, Sweden (Sample Rb2a, glacial moraine)	Environmental	Open in IMG/M
3300015208	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Samples st-15,16,16 pooled, 1st-3rd transect points, snow/rock/ice interface)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300020186	Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.MP6.IB-1	Environmental	Open in IMG/M
3300020213	Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.MP8.IB-2	Environmental	Open in IMG/M
3300021470	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Sep2016-L239-20m	Environmental	Open in IMG/M
3300023264	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L151-409C-6	Environmental	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027831	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare3Fresh (SPAdes)	Environmental	Open in IMG/M
3300027843	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare3Fresh (SPAdes)	Environmental	Open in IMG/M
3300027870	Freshwater and sediment microbial communities from Lake Erie, Canada (SPAdes)	Environmental	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300027897	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - DIP11 DI (SPAdes)	Environmental	Open in IMG/M
3300027900	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - BRP12 BR (SPAdes)	Environmental	Open in IMG/M
3300027902	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - CRP12 CR (SPAdes)	Environmental	Open in IMG/M
3300028712	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_139	Environmental	Open in IMG/M
3300028732	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Fen_N3_4	Environmental	Open in IMG/M
3300028754	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_157	Environmental	Open in IMG/M
3300028802	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_S	Environmental	Open in IMG/M
3300028855	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_N1_4	Environmental	Open in IMG/M
3300028869	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Fen_N1_4	Environmental	Open in IMG/M
3300029984	I_Fen_E1 coassembly	Environmental	Open in IMG/M
3300029990	I_Fen_N2 coassembly	Environmental	Open in IMG/M
3300030002	II_Fen_N1 coassembly	Environmental	Open in IMG/M
3300030294	II_Fen_E3 coassembly	Environmental	Open in IMG/M
3300030943	III_Fen_N2 coassembly	Environmental	Open in IMG/M
3300031232	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_3	Environmental	Open in IMG/M
3300031366	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 25_S	Environmental	Open in IMG/M
3300031726	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_1	Environmental	Open in IMG/M
3300031834	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_0	Environmental	Open in IMG/M
3300031873	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G15_0	Environmental	Open in IMG/M
3300031902	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_2	Environmental	Open in IMG/M
3300031918	III_Fen_N3 coassembly	Environmental	Open in IMG/M
3300031997	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G06_0	Environmental	Open in IMG/M
3300031999	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_20	Environmental	Open in IMG/M
3300032018	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_middle	Environmental	Open in IMG/M
3300032143	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_0	Environmental	Open in IMG/M
3300032156	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G14_0	Environmental	Open in IMG/M
3300032163	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G07_0	Environmental	Open in IMG/M
3300032164	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_0	Environmental	Open in IMG/M
3300032173	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C1_top	Environmental	Open in IMG/M
3300032177	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G05_0	Environmental	Open in IMG/M
3300032256	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_top	Environmental	Open in IMG/M
3300032275	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C1_bottom	Environmental	Open in IMG/M
3300032342	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G10_0	Environmental	Open in IMG/M
3300032397	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_0	Environmental	Open in IMG/M
3300032516	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_0	Environmental	Open in IMG/M
3300033482	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D1_C	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ13530_1036071091	3300001213	Wetland	MLVEMAYLYGDRISDTESAKLVVKLRGRGTPAASLAADTVTRGASRDATAESSASARDAILLELRDWPGLEDEAPSLATLRDRLAAPEGLRII*
C688J35102_1182216151	3300002568	Soil	VSDAESAQLIEKLRSRGTSAALVAANTVSRGPSRDATAATSTQAREAILFELNAWKGLDESAPNLAALRDRLSAPPRGLRII*
Ga0062383_103807142	3300004778	Wetland Sediment	MLGVMPRLYGDRISDAESAALIAKLRARGTSDALVAANTVGKGPSRDATVATSLQARDAILLELRDWKDLDEEAPSLAGLRDRLAA
Ga0062380_100299382	3300004779	Wetland Sediment	MLNEMPRLYGDRVTDAESAELVAKLLARRTPDALVAANTVAKGPSRDATAATSLQARDAILLELLEWSDLDVSSPCLAALRDRLASPQRGLRII*
Ga0062380_101131992	3300004779	Wetland Sediment	MLEVMPRLYGDRISDAESAELIAKLRARGTADALVAANTVGKGPSRDATVATSLQARDAILFELLDWEDLDEKAPSLAGLRDRLATPQQGLKII*
Ga0070683_1024491991	3300005329	Corn Rhizosphere	YGDRVSDAESAELIDKLRSRGTAEALVAANTVSRGPSRDATAATSTQAREAILLELNEWAGLDESAPNLAALRDRLSAPPRGLRII*
Ga0070670_1009762792	3300005331	Switchgrass Rhizosphere	SAQLIEKLRSRGTSAAIVAANTVSRGPSRDATAATSTQAREAILFELNAWTGLDESAPNLAALRDRLSAPPRGLRII*
Ga0068869_1020103021	3300005334	Miscanthus Rhizosphere	SISARMLIRVPLIYGDRVSDAESAQLIDKLRSRGTSAALVAANTVSRGPSRDATAATSTQAREAILFELNEWAGLDDSAPNLAALRDRLSAPPRGLRII*
Ga0070675_1003741761	3300005354	Miscanthus Rhizosphere	VSDAESAQLIEKLRSRGTSAALVAANTVSRGPSRDATAATSTQAREAILFELNAWTGLDESAPNLAALRDRLSAPPRGLRII*
Ga0070674_1019386482	3300005356	Miscanthus Rhizosphere	MLAPVPLIYGDRVSDAESAQLIDKLRSRGTSAALAAANTVGRGPSRDATAATSTQAREAILFELNAWTGLDESAPNLAALRDRL
Ga0070659_1007654022	3300005366	Corn Rhizosphere	VSDAESAELIDKLRSRGTAEALVAANTVSRGPSRDATAATSTQAREAILLELNEWAGLDESAPNLAALRDRLSAPPRGLRII*
Ga0070678_1001504463	3300005456	Miscanthus Rhizosphere	MLIRVPLIYGDRVSDAESAQLIDKLRSRGTSAALVAANTVSRGPSRDATAATSTQAREAILFELNEWAGLDDSAPNLAALRDRLSAPPRGLRII*
Ga0068863_1023245302	3300005841	Switchgrass Rhizosphere	AAAAGFCTYAGSLVPLIYGDRVSDAESAQLIDKLRSRGTSAALAAANTVGRGPSRDATAATSTQAREAILFELNAWTGLDETAPSLAALRDRLSAPPRGLRII*
Ga0075028_1001499044	3300006050	Watersheds	VVSGTYTYARWVPLLYGNRISDAESAELISKLRARGTSGATAAADTVGTGPRRDTTAESSLQARNAILFELQEWNDLATKAPGLVGLRDRLSGPQQGRRII*
Ga0075029_1010791121	3300006052	Watersheds	MAYLYGDRISDGESAELVGKLRVRGTTEAMLAADTVSRGASRDATAASSLRARDAILLELRAWADLD
Ga0075017_1000267234	3300006059	Watersheds	MLAEMAYLYGDRISDVESAELVGKLRVRGTTEAMLAADTVSRGASRDATAESSLRARDAILLELRAWADLDQKAPGLAGLRDRLSAPEGLRII*
Ga0075015_1007033601	3300006102	Watersheds	MLAEMAYLYGDRISDVESAELVGKLRVRGTTEAMLAADTVSRGASRDATAESSLRARDAILLELRAWADLDQKAPS
Ga0075021_105731682	3300006354	Watersheds	MPRLYGDRISDAESAELLAKLTARGTPDALVAVSTVGRGPGRDATVATSERARDAILLELQDWEGLDQTAPGLAGLRDRLSAPRQGLRII*
Ga0074063_123332821	3300006953	Soil	VSDAESAQLIDKLRSRGTSAALVAANTVSRGPSRDATAATSTQAREAILFELNAWVDLDDSAPNLAALRDRLSAPPRGLRII*
Ga0074063_130330762	3300006953	Soil	VPLLYGNRISDAESAELISKLRARGTSAATSAADTVGTGPKRDTTAASSLQAREAILLELQEWNDLAANAPGLVGLRDRLSGPQQGRRII*
Ga0105044_101553262	3300007521	Freshwater	MPRLYGDRITDAESAELIAKLRSRGTSDAKIAADTVGKGPGRDTTVATSLKAREAILVELRAWPDLDASAPGLAGIRDRLSGQQQGQRII*
Ga0105243_106634623	3300009148	Miscanthus Rhizosphere	VSDAESAQLIDKLRSRGTSAALVAANTVSRGPSRDATAATSTQAREAILFELNAWTGLDESAPNLAALRDRLSAPPRGLRII*
Ga0105243_125671641	3300009148	Miscanthus Rhizosphere	MLAPVPLIYGDRVSDAESAQLIDKLRSRGTSAALAAANTVGRGPSRDATAATSTQAREAILFELNAWTGLDESAPSLAALRDRLSAPPRGLRII*
Ga0105242_129610791	3300009176	Miscanthus Rhizosphere	RSRGTSAALAAANTVGRGPSRDATAATSTQAREAILFELNAWTGLDESAPNLAALRDRLSAPPRGLRII*
Ga0105248_118124401	3300009177	Switchgrass Rhizosphere	MLIRVPLIYGDRVSDAESAQLIDKLRSRGTSAALVAANTVSRGPSRDATAATSTQAREAILFELNEWAGLDDSAPSLAALRDRLSAPPRGLRII*
Ga0114942_14866141	3300009527	Groundwater	MPRLYGDRITDAESAELIAKLRSRGTADAILAADTVGKGPGRDTTVATSLKAREAILVELRAWPDLDASAPGLAGIRDRLSGQQQGQRII*
Ga0157295_100298861	3300012906	Soil	MLAPVPLIYGDRVSDAESALLIDKLRSRGTSAALAAANTVGRGPSRDATAATSTQAREAILFELNAWTGLDESAPNLAALRDRLSAPPRGLRII*
Ga0157286_104781971	3300012908	Soil	MLAPVPLIYGDRVSDAESAELIDKLRSRGTSAALVAANTVSRGPSRDATAATSTQAREAILLELTEWDGLDESAPNLAALRDRLSAPPRGLRII
Ga0164299_106419802	3300012958	Soil	MLAPVPLIYGDRVSDAESAQLIDKLRSRGTSAALVAANTVSRGPSRDATAATSTQAREAILFELNAWTGLDETAPSLAALRDRLSAPPRGLRII*
Ga0164309_104304652	3300012984	Soil	MLAPVPLIYGDRVSDAESAQLIDKLRSRGTSAALVAANTVSRGPSRDATAATSTQAREAILFELNAWAGLDESAPNLAALRDRLSAPPRGLRII*
Ga0164309_116344251	3300012984	Soil	MLARVPLIYGDRVSDAESAQLIDKLRSRGTSAALAAANTVGRGPSRDATAATSTQAREAILFELNAWTGLDESAPSLAALRDRLSAPPRGLRII*
Ga0075343_11977822	3300014317	Natural And Restored Wetlands	LYGDRISDAESAELIAKLRARGTSEATIAADTVGRGPGRDTTVATSLKAREAILVELRDWHDLDTHAPSLAVIRDRLAGQQRGQRII*
Ga0075355_11466181	3300014322	Natural And Restored Wetlands	KLVVRLRGRGTTAASLAADTVTRGASRDATAESSLSARDAILLELREWPGLDDEAPSLAMLRNRLAAPEGLRII*
Ga0075355_11610161	3300014322	Natural And Restored Wetlands	KIAADTVGKGPGRDTTVATSLKAREAILHELRDWPDLDTSAPGLAGIRDRLSGQQQGQRII*
Ga0163163_120713201	3300014325	Switchgrass Rhizosphere	VSDAESAQLIDKLRSRGTSAALVAANTVSRGPSRDATAATSTQAREAILFELNAWKGLDETAPNLAALRDRLSAPPRGLRII*
Ga0163163_129897901	3300014325	Switchgrass Rhizosphere	VSDAESAQLIDKLRSRGTSAALAAANTVGRGPSRDATAATSTQAREAILFELNAWEGLDETAPNLAALRDRLSAPPRGLRII*
Ga0157380_113949061	3300014326	Switchgrass Rhizosphere	VSDAESAQLIDRLRSRGTPAALAAANTVGRGPSRDATAATSTQAREAILFELNSWTGLDENAPSLAALRDRLSAPPRGLRII*
Ga0157379_106407762	3300014968	Switchgrass Rhizosphere	VSDAESAQLIDKLRSRGTSAALVAANTVSRGPSRDATAATSTQAREAILFELNAWSGLDDSAPNLAALRDRLSAPPRGLRII*
Ga0157376_101966543	3300014969	Miscanthus Rhizosphere	MLAPVPLIYGDRVSDAESAQLIDKLRSRGTSAALAAANTVGRGPSRDATAATSTQAREAILFELNAWTGLDETAPSLAALRDRLSAPPRGLRII*
Ga0167665_10068913	3300015163	Glacier Forefield Soil	MPRLYGDRISDAESAELIAKLRARGTSESIIAADTVGKGPRRDATVATSQQARDTILLELRDWDDLDEKAPRLAGLRDRLSAPLQGHRII*
Ga0167667_10136433	3300015189	Glacier Forefield Soil	MGAMPRLYGDRITDAESTELIAKLRSRGTSEAKIAADTVGKGPGRDTTVATSLKAREAILLELRSWPNLDASAPGLAGIRDRLSGQQQGQRII*
Ga0167667_10194724	3300015189	Glacier Forefield Soil	MKPMPRLYGDRITDAESAELIAKLRSRGTSDAKIAADTVGKGPGRDTTVATSLKAREAILDELRSWPDLDASAPGLAGIRDRLSGQQQGQRII*
Ga0167667_10757182	3300015189	Glacier Forefield Soil	VSDAESAELIDKLRSRGTPAALVAANTVSRGPSRDATAATSTQAREAILFELNAWKNLDESAPSLAALRDRLSAPPRGLRII*
Ga0167664_10976181	3300015208	Glacier Forefield Soil	PRLYGDRITDAESIELVARLRARGTTGSLMAAATIGKGAGRDTTMASSEQARDAILLELREWDGLDEHAPSLAGLRNRLSGPQQGRRII*
Ga0132258_121052562	3300015371	Arabidopsis Rhizosphere	MLAPVPLIYGDRVSDAESAQLIDKLRSRGTSAALAAANTVSRGPSRDATAATSTQAREAILFELNAWTGLDESAPNLAALRDRLSAPPRGLRII*
Ga0132256_1035894251	3300015372	Arabidopsis Rhizosphere	MLLRVPLIYGDRVSDAESAELIDKLRSRGTSAALVAANTVSRGPSRDATAATSTQAREAILFELNEWAGLDDSAPNLAALRDRLSAPPRGLRII*
Ga0132255_1045000512	3300015374	Arabidopsis Rhizosphere	MLAPVPLIYGDRVSDAESAQLIDKLRSRGTSAALAAANTVGRGPSRDATAATSTQAREAILFELNSWTGLDENAPSLAALRD
Ga0184624_103247181	3300018073	Groundwater Sediment	VSDAESAQLIDKLRSRGTSAALVAANTVSRGPSRDATAATSTQAREAILFELNAWTGLDESAPNLAALRDRLSAPPRGLRII
Ga0184625_105090651	3300018081	Groundwater Sediment	VPLIYGDRVSDAESAQLIDRLRSRGTSAALVAANTVSRGPSRDATAATSTQAREAILFELNAWTGLDESAPNLAALRDRLSAPPRGLRII
Ga0190274_100458761	3300018476	Soil	VPLIYGDRVSDAESAQLIDKLRSRGTSAALVAANTVSRGPSRDATAATSTQAREAILFELTAWTGLDESAPNLAALRDRLSAPPRGLRII
Ga0190274_128224281	3300018476	Soil	MLAPVPLIYGDRVSDAESAQLIDKLRSRGTSAALAAANTVGRGPSRDATAATSTQAREAILFELNAWPGLDESAPSLAALRDRLSAPPRGLRII
Ga0190274_133878811	3300018476	Soil	VSDAESAELIAKLRARGTSAAINAANTVGTGPSRDTTAATSLEARDAILLELRGWANLDEDAPDLAGLRDRLATPQQGRRII
Ga0190271_100588556	3300018481	Soil	MDSMPRLYGDRITDAESAELIAKLRSRGTSDAKIAADTVGKGPGRDTTVATSLKAREAILLELRSWPDLDASAPGLAGIRDRLSGQQQGQRII
Ga0190271_105235973	3300018481	Soil	MLTVVPLIYGDRVSDAESAQLIDKLRSRGTSAALVAANTVSRGPSRDATAATSTQAREAILFELTAWTGLDESAPNLAALRDRLSAPPRGLRII
Ga0163153_100813964	3300020186	Freshwater Microbial Mat	MPRLYGDRITDAESAELIARLRARGTSDATIAADTVGKGPGRDTTVATSLKAREAILLELRSWTDLDASAPGLAGIRDRLSGQQQGQRII
Ga0163152_104004233	3300020213	Freshwater Microbial Mat	LIARLRARGTSDATIAADTVGKGPGRDTTVATSLKAREAILLELRSWTDLDASAPGLAGIRDRLSGQQQGQRII
Ga0194051_10542541	3300021470	Anoxic Zone Freshwater	DRISDAESAELIAKLRARGTPDAAIGADTVGKGPGRDATVATTLQARGAILRELRDWANLDSEAPNLAVIRDRLAGQQQGQRII
Ga0247772_11018782	3300023264	Plant Litter	GDRVSDAESALLIDKLRSRGTSAALAAANTVGRGPSRDATAATSTQAREAILFELNAWTGLDESAPNLAALRDRLSAPPRGLRII
Ga0207690_109055712	3300025932	Corn Rhizosphere	IDKLRSRGTAEALVAANTVSRGPSRDATAATSTQAREAILLELNEWAGLDESAPNLAALRDRLSAPPRGLRII
Ga0207686_107888472	3300025934	Miscanthus Rhizosphere	VSDAESAQLIDKLRSRGTSAALVAANTVSRGPSRDATAATSTQAREAILFELNEWAGLDDSAPNLAALRDRLSAPPRGLRII
Ga0207686_116818451	3300025934	Miscanthus Rhizosphere	RSRGTSAALAAANTVGRGPSRDATAATSTQAREAILFELNAWTGLDESAPNLAALRDRLSAPPRGLRII
Ga0207704_116777131	3300025938	Miscanthus Rhizosphere	YGDRVSDAESAQLIDKLRSRGTSAALVAANTVSRGPSRDATAATSTQAREAILFELNEWAGLDDSAPNLAALRDRLSAPPRGLRII
Ga0207704_117711712	3300025938	Miscanthus Rhizosphere	VSDAESAQLIDKLRSRGTSAALVAANTVSRSPSRDATAATSTQAREAILFELNAWTGLDESAPNLAALRDRLSAPPRGLRII
Ga0207691_105520602	3300025940	Miscanthus Rhizosphere	VSDAESAQLIEKLRSRGTSAALVAANTVSRGPSRDATAATSTQAREAILFELNAWTGLDESAPNLAALRDRLSAPPRGLRII
Ga0207679_109512013	3300025945	Corn Rhizosphere	MLAAVPLIYGDRVSDAESAQLIERLRSRGTTAALVAANTVSRGPSRDATAATSTQAREAILLELNEWDGLDESAPNLAALRDRLSAPPRGLRII
Ga0207683_110811642	3300026121	Miscanthus Rhizosphere	MLAPVPLIYGDRVSDAESALLIDKLRSRGTSAALAAANTVGRGPSRDATAATSTQAREAILFELNAWTGLDESAPNLAALRDRLSAPPRGLRII
Ga0209797_100367623	3300027831	Wetland Sediment	MLNEMPRLYGDRVTDAESAELVAKLLARRTPDALVAANTVAKGPSRDATAATSLQARDAILLELLEWSDLDVSSPCLAALRDRLASPQRGLRII
Ga0209797_101844552	3300027831	Wetland Sediment	MLEVMPRLYGDRISDAESAELIAKLRARGTADALVAANTVGKGPSRDATVATSLQARDAILFELLDWEDLDEKAPSLAGLRDRLATPQQGLKII
Ga0209797_104085071	3300027831	Wetland Sediment	NHGGPDLDLAAADDRHGQAVARMLGVMPRLYGDRISDAESAALIAKLRARGTSDALVAANTVGKGPSRDATVATSLQARDAILLELRDWKDLDEEAPSLAGLRDRLAAPQQGLKII
Ga0209798_101954212	3300027843	Wetland Sediment	MLEVMPRLYGDRISDAESAELIAKLRARGTSDALVAANTVGKGPSRDATVATSLQARDAILLELLDWEDLDEKAPSLAVLRDRLAAPQQGLKII
Ga0209023_100825903	3300027870	Freshwater And Sediment	MPRLYGDRISDAESAELVAKLRARGTSQATIAANTVGKGPSRDTTVATSLQARDAILLELRDWDDLDERAPGLAGLRDRLSAPQQERRII
Ga0209068_100098514	3300027894	Watersheds	VPLLYGNRISDAESAELISKLRARGTSGATAAADTVGTGPRRDTTAESSLQARNAILFELQEWNDLATKAPGLVGLRNRLSGPQQGRRII
Ga0209068_102519732	3300027894	Watersheds	MPRLYGDRISDAESAELLAKLTARGTPDALVAVSTVGRGPGRDATVATSERARDAILLELQDWEGLDQTAPGLAGLRDRLSAPRQGLRII
Ga0209254_101133161	3300027897	Freshwater Lake Sediment	LYGDRISDAESAELIAKLRARGTTDALVAANTVGKGPSRDATVATSLQARDAILLELRDWEDLDETAPSLAGLRDRLAAPQQGLKII
Ga0209254_101576873	3300027897	Freshwater Lake Sediment	MLEVMPRLYGDRISDAESAELIAKLRARGTTDALVAANTVGKGPSRDATVATSLQARDAILLELRDWEDLDETAPSLAGLRDRLAAPQQGLKII
Ga0209253_105847622	3300027900	Freshwater Lake Sediment	MLEVMPRLYGDRISDAESAELIAKLRARGTSDALVAANTVGKGPSRDATVATSLQARDAILLELRDWEDLDEKAPSLAGLRDRLAAPQQGLKII
Ga0209048_100141992	3300027902	Freshwater Lake Sediment	MAYLYGDRISDVESAELVGKLRVRGTTEAILAADTVTRGASRDATAESSLRARDAILLELRAWADLDQKAPGLAGLRDRLSAPEGLRII
Ga0307285_100437961	3300028712	Soil	GSLVPLIYGDRVSDAESAQLIDKLRSRGTSAALVAANTVSRGPSRDATAATSTQAREAILFELNAWTGLDESAPNLAALRDRLSAPPRGLRII
Ga0302264_11039262	3300028732	Fen	MAYLYGDRISDTDSAKLVGKLRDRGTTGAILAAQTVTRGASRDATAESSLQARDAILLELRDWADLDQDAPSLATLRDRLAAPEGLRII
Ga0307297_101392791	3300028754	Soil	VSDAESAQLIEKLRSRGTSAALVAANTVSRGPSRDATAATSTQAREAILFELKAWTGLDESAPNLAALRDRLSAPPRGLRII
Ga0307503_101026452	3300028802	Soil	MLAPVPLIYGDRVSDAESAQLIDKLRSRGTSAALAAANTVGRGPSRDATAATSTQAREAILFELNAWTGLDETAPSLAALRDRLSAPPRGLRII
Ga0302257_11002661	3300028855	Fen	ARGTTGAILAAQTVTRGASRDATAESSLQARDAILLELRDWADLDQDAPSLATLRDRLAAPEGLRII
Ga0302263_101994671	3300028869	Fen	MAYLYGDRISDTDSAKLVGKLRDRGTTGAMLAAQTVTRGASRDATAESSMQARDAILLELRDWADLDEDAPG
Ga0311332_112979372	3300029984	Fen	MSTYDSAMPRLYGDRISDSESAELIAKLRARGTSEAITAADTVGKGPRRDATVATSEQARNTILLELRDWDDLDATAPRLAGLRDRLSAPQQGHRII
Ga0311336_106835142	3300029990	Fen	DSAKLVGKLRDRGTTGAMLAAQTVTRGASRDATAESSMQARDAILLELRDWADLDEDAPGLATLRDRLAAPEGLRII
Ga0311350_104542242	3300030002	Fen	MAYLYGDRISDTDSAKLVGKLRDRGTTGAMLAAQTVTRGASRDATAESSMQARDAILLELRDWADLDKDAPGLATLRDRLAAPEGLRII
Ga0311349_119890652	3300030294	Fen	MPRLYGDSVSDAESALLIEKLRLRGSSGALIAANTVGKGPGRDATAETSNQAREAILLELREWADLDSTAPDLAVLRDHLSAPQQGKRI
Ga0311366_100601245	3300030943	Fen	MAYLYGDRISDTDSAKLVGKLRDRGTTGAMLAAQTVTRGASRDATAESSMQARDAILLELRDWADL
Ga0302323_1007820992	3300031232	Fen	MPRLYGDRVSDAESALLIEKLRLRGSSGALIAANTVGKGPGRDATAETSNQAREAILLELREWADLDSTAPDLAVLRDHLSAPQQGKRII
Ga0302323_1009016211	3300031232	Fen	MAYLYGDRISDTDSAKLVGKLRDRGTTGAMLAAQTVTRGASRDATAESSMQARDAILLELRDWADLDEDAPGLATLRDRLA
Ga0302323_1023175703	3300031232	Fen	AKLRARGTSEAIIAADTVGKGPRRDATVATSQQARHTILLELRDWDDLDTTAPRLAGLRDRLSAPQQGHRII
Ga0307506_101176042	3300031366	Soil	GTSAALVAANTVSRGPSRDATAATSTQAREAILFELNAWTGLDESAPNLAALRDRLSAPPRGLRII
Ga0302321_1004406353	3300031726	Fen	RDRGTTGAMLAAQTVTRGASRDATAESSLQARDAILLELRDWADLDQDAPSLATLRDRLAAPEGLRII
Ga0302321_1020517221	3300031726	Fen	MAYLYGDRISDTDSAKLVGKLRDRGTTGAMLAAQTVTRGASRDATAESSMQARDAILLELRDWADLDEDAPGLATLRDRLAAPE
Ga0315290_100230856	3300031834	Sediment	MPRLYGDRISDAESAELVAKLRARGTADALIAANTVGKGPSRDATVATSLQARDAILLELRDWEGLDEQAPSLAGLRDRLATPQQGLKII
Ga0315290_105123932	3300031834	Sediment	MPRLYGDRISDAESAELIAKLRARGTSDALVAANTVGKGPSRDATVATSLQARDAILLELRDWEGLDEQAPSLAGLRDRLATPQQGLKII
Ga0315290_105284681	3300031834	Sediment	MPRLYGDRISDAESAQLIAKLRARGTSEAIIAADTVGKGPRRDATVATSQQARDTILLELRDWDDLDETAPRLAGLRDRLSAPLQAHRII
Ga0315290_105759302	3300031834	Sediment	MPRLYGDRISDEESAELIAKLRARGTSEAIIAADTVGKGPRRDATVATSLQARDTILLELRDWDDLDETAPRLAGLRDRLSAPLQGHRII
Ga0315290_111270822	3300031834	Sediment	MLDVMPRLYGDRISDAESAELIAKLKARGTSDALVAANTVGKGPSRDATVATSLQARDAILLELRDWEDLDEKAPSLAVLRDRLAAPQQGLKII
Ga0315290_112779351	3300031834	Sediment	MPRLYGDRITDAESAELIAKLRARGTSDSKIAADTVGKGPGRDTTVATSLKAREAILHELRDWPDLDASAPGLAGIRDRLSGQQQGQRII
Ga0315290_116759621	3300031834	Sediment	MPRLYGDRISDAESAELVAKLRARGTSEAIIAADTVGKGPRRDATVATSQQARDTILLELRDWDDLDATAPRLAGLRDRLSAPLQGHRII
Ga0315297_103321032	3300031873	Sediment	MPRLYGDRISDAESAELVAKLRARGTSEAIIAAETVGKGPRRDATVATSQQARDTILLELRDWDDLDEKAPRLAGLRDRLSAPLQGHRII
Ga0315297_109329571	3300031873	Sediment	MPRLYGDRITDAESAELIAKLRSRGTSDAKIAADTVGKGPGRDTTVATSLKAREAILVELRAWPDLDASAPGLAGIRDRLSGQQQGQRII
Ga0315297_113338362	3300031873	Sediment	VMPRLYGDRISDAESAELIAKLRARGTSDALVAANTVGKGPSRDATVATSLQARDAILLELCDWEDLDETAPSLAALRDRLAAPQQGLRII
Ga0302322_1000877234	3300031902	Fen	MPRLYGDRVSDAESALLIEKLRLRGSSGALIAANTVGKGPGRDATAETSNQAREAILLELQEWADLDSTAPDLAVLRDHLSAPQQGKRII
Ga0302322_1001989443	3300031902	Fen	MAYLYGDRISDTDSAKLVGKLRDRGTTGAMLAAQTVTRGASRDATAESSMQARDAILLELRDWADLDEDAPGLATLRDRLAAPEGLRII
Ga0311367_117269291	3300031918	Fen	EKLRLRGSSGALIAANTVGKGPGRDATAETSNQAREAILLELREWADLDSTAPDLAVLRDHLSAPQQGKRII
Ga0315278_108775921	3300031997	Sediment	MPRLYGDRISDAESAELIAKLRARGTSDALVAANTVGKGPSRDATVATSIQARDAILLELRDWDGLDEQAPSLAGLRDRLATPQQGLKII
Ga0315278_109436242	3300031997	Sediment	MPRLYGDRISDAESAELIAKLRARGTSDALVAANTVGKGPSRDATVATSLQARDAILLELRDWEGLDEQAPSLAGLRDRLASPQQGLKII
Ga0315278_115309341	3300031997	Sediment	MPRLYGDRISDAESAQLIAKLRARGTSEAIIAADTVGKGPRRDATVATSQQARDTILLELRDWDDLDETAPRLAGLRDRLSAPLQAHR
Ga0315278_121465972	3300031997	Sediment	MPRLYGDRISDAESAELVAKLRARGTSEAIIAAETVGKGPRRDATVATSQQARDTILLELRDWDDLDEKAPRLAGL
Ga0315274_117280221	3300031999	Sediment	REFRIAPLNGQWAVRHGPPVTRKLEAMPRLYGDRISDAESAELVAKLRARGTADALIAANTVGKGPSRDATVATSLQARDAILLELRDWEGLDEQAPSLAGLRDRLATPQQGLKII
Ga0315272_100686364	3300032018	Sediment	MGVMPRLYGDRISDAESAELIAKLRARGTSDAKIAADTVGKGPGRDTTVATSLKAREAILLELRDWDDLDAAAPNLAALRNRLSGQQQGQRII
Ga0315272_105102512	3300032018	Sediment	MPRLYGDRISDAESAELIAKLRARGTSDALVAANTVGKGPSRDATVASSLQARDAILLELRDWEGLDEQAPSLAGLRDRLATPQQGLKII
Ga0315292_105518712	3300032143	Sediment	MPRLYGDRISDAESAELIAKLKARGTSDALVAANTVGKGPSRDATVATSLQARDAILLELRDWEDLDEKAPSLAVLRDRLAAPQQGLKII
Ga0315292_107506012	3300032143	Sediment	MTESYYDQFMPRLYGDRISDEESAELIAKLRARGTSEAIIAADTVGKGPRRDATVATSLQARDTILLELRDWDDLDETAPRLAGLRDRLSAPLQGHRII
Ga0315295_111849961	3300032156	Sediment	PKIARERSRVRATDGWETCSRLLMTESYYDQLMPRLYGDRISDEESAELIAKLRARGTSEAIIAADTVGKGPRRDATVATSLQARDTILLELRDWDGLDETAPRLAGLRDRLSAPLQGHRII
Ga0315295_113505882	3300032156	Sediment	MAKAARHGPPVTRKLEVMPRLYGDRISDAESAELVAKLRARGTSDALVAANTVGKGPSRDATVATSIQARDAILLELRDWQGLDEQAPSLAGLRDRLASPQQGLKII
Ga0315281_111349582	3300032163	Sediment	MPRLYGDRISDAESAELIAKLRARGTSDAKIAADTVGKGPGRDTTVATSLKAREAILLELRDWDDLDAAAPNLAALRNRLSGQQQGQRII
Ga0315281_113802602	3300032163	Sediment	MPRLYGDRISDAESAELVAKLRARGTSEAIIAAETVGKGPRRDATVATSQQARDTILLELRNWDDLDEKAPRLAGLRDRLSAPLQGHRII
Ga0315283_105061902	3300032164	Sediment	MPRLYGDRISDAESAELVAKLRARGTSEAIIAADTVGKGPRRDATVATSQQARDTILLELRDWDDLDEKAPRLAGLRDRLSAPLQGHRII
Ga0315283_114219311	3300032164	Sediment	YGDRISDAESAELIAKLRARGTSEALVAANTVGKGPSRDATVATSLQARDAILLELRDWEDLDEKAPSLAGLRDRLAAPQQGLKII
Ga0315283_115646642	3300032164	Sediment	IAKLRARGTSDALVAANTVGKGPSRDATVATSLQARDAILLELCDWEDLDETAPSLAALRDRLAAPQQGLRII
Ga0315283_121322541	3300032164	Sediment	VGDPPPCATVTSRRLHGMLDVMPRLYGDRISDAESAELIAKLKARGTSDALVAANTVGKGPSRDATVATSLQARDAILLELRDWEDLDEKAPSLAVLRDRLAAPQQGLKII
Ga0315268_107982222	3300032173	Sediment	MAYLYGDRISDTDSAKLVGKLRERGTTGAMLAAQTVTRGASRDATAESSLQARDAILLELRDWADLDQDAPGLATLRDRLAAPEGLRII
Ga0315268_109624563	3300032173	Sediment	RISDAESAELIAKLRARGTSDALVAANTVGKGPSRDATVATSIQARDAILLELRDWEGLDEQAPSLAGLRDRLATPQQGLKII
Ga0315276_115821271	3300032177	Sediment	MLEVMPRLYGDRISDAESAELIAKLRARGTSDALVAANTVGKGPSRDATVATSLQARDAILLELRDWEDLDEKAPSLAVLRDRLA
Ga0315276_116106342	3300032177	Sediment	PAGSGTSAPSGIPESRIARKLVVMPRLYGDRITDAESAELIAKLRSRGTSDAKIAADTVGKGPGRDTTVATSLKAREAILVELRAWPDLDASAPGLAGIRDRLSGQQQGQRII
Ga0315271_101843482	3300032256	Sediment	MPRLYGDRISDAESAELIAKLRARGTSDALVAANTVGKGPSRDATVATSIQARDAILLELRDWEDLDEQAPSLAGLRDRLATPQQGLKII
Ga0315271_101852673	3300032256	Sediment	MPRLYGDRISDAESAELVAKLRARGTSEAIIAAETVGKGPRRDATVATSQQARDTILLELRDWDDLDEKAPRLAGLRDRLSAPLQGHR
Ga0315271_106247151	3300032256	Sediment	VPRLYGDRITDAESAELVSKLRSRGTAGAIAAADTVGKGPRRDATVATSMQAREAILLELRDWVDLDSCSPSLAGLRDRLSGSQQGQRII
Ga0315271_109164352	3300032256	Sediment	ISDAESAELVAKLRARGTSEAIIAADTVGKGPRRDATVATSQQARDTILLELRDWDDLDATAPRLAGLRDRLSAPLQGHRII
Ga0315271_117568671	3300032256	Sediment	RHGPTVTRKLKAMPRLYGDRISDAESAELIAKLRARGTSDALVAANTVGKGPSRDATVASSLQARDAILLELRDWEGLDEQAPSLAGLRDRLATPQQGLKII
Ga0315270_107825551	3300032275	Sediment	KLRARGTSEAIIAAETVGKGPRRDATVATSQQARDTILLELRDWDDLDEKAPRLAGLRDRLSAPLQGHRII
Ga0315286_114070541	3300032342	Sediment	SAPSGIRESRIARKLVVMPRLYGDRITDAESAELIAKLRSRGTSDAKIAADTVGKGPGRDTTVATSLKAREAILVELRAWPDLDASAPGLAGIRDRLSGQQQGQRII
Ga0315287_100929315	3300032397	Sediment	MPRLYGDRISDAESAELVAKLRARGTSGALVAANTVGKGPSRDATVASSLQARDAILLELRDWEGLDEQAPSLAGLRDRLATPQQGLKII
Ga0315287_102842072	3300032397	Sediment	PKPARHGPPVARKLKLMPRLYGDRISDAESAELIAKLRARGTSDALVAANTVGKGPSRDATVATSIQARDAILLELRDWDGLDEQAPSLAGLRDRLATPQQGLKII
Ga0315287_107155531	3300032397	Sediment	RPFAPAGRGLAPKDDRHEPAVARMLNVMPRLYGDRISDAESAELIAKLRARGTSDALVAANTVGKGPSRDATVATSLQARDAILLELCDWEDLDETAPSLAALRDRLAAPQQGLRII
Ga0315273_130475231	3300032516	Sediment	MTESYYDQFMPRLYGDRISDEESAELIAKLRARGTSEAIVAADTVGKGPRRDATVATSLQARDTILLELRDWDDLDETAPRLAGLRDRLSAPLQGHRII
Ga0315273_132188521	3300032516	Sediment	MPRLYGDRISDAESAELVAKLRARGTSGALVAANTVGKGPSRDATVASSLQARDAILLELRDWEGLDEQAPSLAGLRDR
Ga0316627_1008451622	3300033482	Soil	MVMAYLYGYRISDTDSADLIGRLHVRGTPDAMLAAVTIRRGAGRVVTVESSQQARAAIALELRLWPDLDRTAPGLVTLRDHLAAPEGLRII

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F053327

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences