NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F053285

Metagenome / Metatranscriptome Family F053285

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F053285
Family Type Metagenome / Metatranscriptome
Number of Sequences 141
Average Sequence Length 86 residues
Representative Sequence VRTVYWVWSMVVFVMVVIQIGLAGYGAFYAANKLDDEGSTIDDKVFEDGFQFHAAFGYFVILAGLVLMIIGLIAGIGKWRLGKH
Number of Associated Samples 125
Number of Associated Scaffolds 141

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 78.99 %
% of genes near scaffold ends (potentially truncated) 97.87 %
% of genes from short scaffolds (< 2000 bps) 90.78 %
Associated GOLD sequencing projects 120
AlphaFold2 3D model prediction Yes
3D model pTM-score0.76

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (97.872 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(19.149 % of family members)
Environment Ontology (ENVO) Unclassified
(27.660 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(31.915 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 66.07%    β-sheet: 0.00%    Coil/Unstructured: 33.93%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.76
Powered by PDBe Molstar

Structural matches with SCOPe domains

SCOP familySCOP domainRepresentative PDBTM-score
a.47.1.1: STATd1bg1a11bg10.78133
c.37.1.0: automated matchesd6qpqa16qpq0.78124
f.5.1.1: Outer membrane efflux proteins (OEP)d1ek9a_1ek90.76817
a.238.1.4: FCH domaind2efka12efk0.75336
f.5.1.0: automated matchesd1yc9a_1yc90.7532


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 141 Family Scaffolds
PF01521Fe-S_biosyn 71.63
PF00507Oxidored_q4 7.09
PF00346Complex1_49kDa 1.42
PF13510Fer2_4 0.71
PF012572Fe-2S_thioredx 0.71

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 141 Family Scaffolds
COG0316Fe-S cluster assembly iron-binding protein IscAPosttranslational modification, protein turnover, chaperones [O] 71.63
COG4841Uncharacterized conserved protein YneR, related to HesB/YadR/YfhF familyFunction unknown [S] 71.63
COG0838NADH:ubiquinone oxidoreductase subunit 3 (chain A)Energy production and conversion [C] 7.09
COG0649NADH:ubiquinone oxidoreductase 49 kD subunit (chain D)Energy production and conversion [C] 1.42
COG3261Ni,Fe-hydrogenase III large subunitEnergy production and conversion [C] 1.42
COG1905NADH:ubiquinone oxidoreductase 24 kD subunit (chain E)Energy production and conversion [C] 0.71


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms97.87 %
UnclassifiedrootN/A2.13 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2170459020|G1P06HT01CFUEVAll Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium588Open in IMG/M
3300000881|JGI10215J12807_1216406All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium546Open in IMG/M
3300001213|JGIcombinedJ13530_103095855All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium509Open in IMG/M
3300002459|JGI24751J29686_10081501All Organisms → cellular organisms → Bacteria670Open in IMG/M
3300003987|Ga0055471_10150889All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium709Open in IMG/M
3300003995|Ga0055438_10196784All Organisms → cellular organisms → Bacteria612Open in IMG/M
3300004479|Ga0062595_100224360All Organisms → cellular organisms → Bacteria1190Open in IMG/M
3300004479|Ga0062595_101095912All Organisms → cellular organisms → Bacteria695Open in IMG/M
3300004480|Ga0062592_102531289All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium517Open in IMG/M
3300004782|Ga0062382_10437728All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium621Open in IMG/M
3300005161|Ga0066807_1008548All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium919Open in IMG/M
3300005161|Ga0066807_1041081All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium526Open in IMG/M
3300005354|Ga0070675_100053892All Organisms → cellular organisms → Bacteria3308Open in IMG/M
3300005356|Ga0070674_101676564All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium574Open in IMG/M
3300005459|Ga0068867_101086684All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium730Open in IMG/M
3300005466|Ga0070685_10076741All Organisms → cellular organisms → Bacteria1993Open in IMG/M
3300005549|Ga0070704_101548030All Organisms → cellular organisms → Bacteria611Open in IMG/M
3300005713|Ga0066905_102282720All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium506Open in IMG/M
3300005718|Ga0068866_10644132All Organisms → cellular organisms → Bacteria721Open in IMG/M
3300005841|Ga0068863_100519610All Organisms → cellular organisms → Bacteria1174Open in IMG/M
3300006572|Ga0074051_10001465All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia2673Open in IMG/M
3300006581|Ga0074048_10032739All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria3361Open in IMG/M
3300006881|Ga0068865_100628588All Organisms → cellular organisms → Bacteria910Open in IMG/M
3300006881|Ga0068865_102142907All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium509Open in IMG/M
3300006918|Ga0079216_10128634All Organisms → cellular organisms → Bacteria1281Open in IMG/M
3300009098|Ga0105245_11006264All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium878Open in IMG/M
3300009101|Ga0105247_10854731All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium699Open in IMG/M
3300009148|Ga0105243_10007592All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia8337Open in IMG/M
3300009157|Ga0105092_10927740All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium515Open in IMG/M
3300009174|Ga0105241_11571575All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium635Open in IMG/M
3300009817|Ga0105062_1036852All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium868Open in IMG/M
3300010029|Ga0105074_1003914All Organisms → cellular organisms → Bacteria2156Open in IMG/M
3300010147|Ga0126319_1282635All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium507Open in IMG/M
3300010362|Ga0126377_13166962All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium531Open in IMG/M
3300011412|Ga0137424_1020175All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1012Open in IMG/M
3300011434|Ga0137464_1281937All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium502Open in IMG/M
3300011441|Ga0137452_1053075All Organisms → cellular organisms → Bacteria1290Open in IMG/M
3300011442|Ga0137437_1278707All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium573Open in IMG/M
3300012232|Ga0137435_1251419All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium537Open in IMG/M
3300012232|Ga0137435_1274230All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium511Open in IMG/M
3300012684|Ga0136614_10468570All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium912Open in IMG/M
3300012897|Ga0157285_10352558All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium516Open in IMG/M
3300012901|Ga0157288_10101607All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium782Open in IMG/M
3300012903|Ga0157289_10092211All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium852Open in IMG/M
3300012906|Ga0157295_10293627All Organisms → cellular organisms → Bacteria564Open in IMG/M
3300012907|Ga0157283_10013153All Organisms → cellular organisms → Bacteria1431Open in IMG/M
3300012910|Ga0157308_10258340All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium618Open in IMG/M
3300012910|Ga0157308_10407097All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium530Open in IMG/M
3300012943|Ga0164241_10830911All Organisms → cellular organisms → Bacteria674Open in IMG/M
3300012958|Ga0164299_11048605All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium605Open in IMG/M
3300012985|Ga0164308_10806390All Organisms → cellular organisms → Bacteria819Open in IMG/M
3300013096|Ga0157307_1139100All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium554Open in IMG/M
3300013308|Ga0157375_11713805All Organisms → cellular organisms → Bacteria744Open in IMG/M
3300014311|Ga0075322_1147450All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium577Open in IMG/M
3300014745|Ga0157377_11185053All Organisms → cellular organisms → Bacteria590Open in IMG/M
3300014884|Ga0180104_1248339All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium530Open in IMG/M
3300015200|Ga0173480_10975405All Organisms → cellular organisms → Bacteria556Open in IMG/M
3300015258|Ga0180093_1034603All Organisms → cellular organisms → Bacteria1094Open in IMG/M
3300015372|Ga0132256_100377922All Organisms → cellular organisms → Bacteria1515Open in IMG/M
3300015372|Ga0132256_102557999All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium611Open in IMG/M
3300015373|Ga0132257_103824033All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium548Open in IMG/M
3300015373|Ga0132257_104243761All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium521Open in IMG/M
3300017792|Ga0163161_11284845All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium636Open in IMG/M
3300017965|Ga0190266_11004175All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium559Open in IMG/M
3300018028|Ga0184608_10450191All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium554Open in IMG/M
3300018031|Ga0184634_10040250All Organisms → cellular organisms → Bacteria1894Open in IMG/M
3300018031|Ga0184634_10350929All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium676Open in IMG/M
3300018031|Ga0184634_10522241All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium528Open in IMG/M
3300018082|Ga0184639_10107421All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1476Open in IMG/M
3300018083|Ga0184628_10442644All Organisms → cellular organisms → Bacteria677Open in IMG/M
3300018083|Ga0184628_10533514All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium602Open in IMG/M
3300018422|Ga0190265_10041246All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria3939Open in IMG/M
3300018476|Ga0190274_10775645All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1013Open in IMG/M
3300019244|Ga0180111_1154795All Organisms → cellular organisms → Bacteria724Open in IMG/M
3300019248|Ga0180117_1232297All Organisms → cellular organisms → Bacteria550Open in IMG/M
3300019259|Ga0184646_1341649All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium749Open in IMG/M
3300019263|Ga0184647_1039506All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium819Open in IMG/M
3300019356|Ga0173481_10153838All Organisms → cellular organisms → Bacteria952Open in IMG/M
3300019356|Ga0173481_10325566All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium725Open in IMG/M
3300019356|Ga0173481_10571705All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium589Open in IMG/M
3300019362|Ga0173479_10705651All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium545Open in IMG/M
3300021081|Ga0210379_10253364All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium765Open in IMG/M
3300022694|Ga0222623_10365943All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium550Open in IMG/M
3300022756|Ga0222622_11012816All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium610Open in IMG/M
3300023069|Ga0247751_1056554All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium664Open in IMG/M
3300023071|Ga0247752_1068789All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium577Open in IMG/M
3300023077|Ga0247802_1034040All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium763Open in IMG/M
3300025791|Ga0210115_1086294All Organisms → cellular organisms → Bacteria643Open in IMG/M
3300025792|Ga0210143_1006434All Organisms → cellular organisms → Bacteria2244Open in IMG/M
3300025926|Ga0207659_10639834All Organisms → cellular organisms → Bacteria908Open in IMG/M
3300025926|Ga0207659_11090296All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium687Open in IMG/M
3300025937|Ga0207669_10528676All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium948Open in IMG/M
3300025938|Ga0207704_11276319All Organisms → cellular organisms → Bacteria627Open in IMG/M
3300025960|Ga0207651_10821195All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium825Open in IMG/M
3300026023|Ga0207677_11743581All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium578Open in IMG/M
3300026089|Ga0207648_10336313All Organisms → cellular organisms → Bacteria1359Open in IMG/M
3300026121|Ga0207683_10204764All Organisms → cellular organisms → Bacteria1794Open in IMG/M
3300026121|Ga0207683_11801971All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium561Open in IMG/M
3300027209|Ga0209875_1036830All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium589Open in IMG/M
3300027444|Ga0207468_1011488All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium509Open in IMG/M
3300027483|Ga0207637_1004093All Organisms → cellular organisms → Bacteria746Open in IMG/M
3300027870|Ga0209023_10350511All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium923Open in IMG/M
3300027880|Ga0209481_10015296All Organisms → cellular organisms → Bacteria3341Open in IMG/M
3300028589|Ga0247818_10311491All Organisms → cellular organisms → Bacteria1049Open in IMG/M
3300028592|Ga0247822_11302824All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium609Open in IMG/M
3300028596|Ga0247821_11204105All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium515Open in IMG/M
3300028597|Ga0247820_10273827All Organisms → cellular organisms → Bacteria1097Open in IMG/M
3300028597|Ga0247820_11284978All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium530Open in IMG/M
3300028710|Ga0307322_10108539All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium718Open in IMG/M
3300028809|Ga0247824_10861106All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium564Open in IMG/M
3300028876|Ga0307286_10169747All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium786Open in IMG/M
3300028885|Ga0307304_10020735All Organisms → cellular organisms → Bacteria2216Open in IMG/M
3300028889|Ga0247827_10189619All Organisms → cellular organisms → Bacteria1127Open in IMG/M
3300030336|Ga0247826_10143163All Organisms → cellular organisms → Bacteria1564Open in IMG/M
3300030903|Ga0308206_1131264All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium588Open in IMG/M
3300031099|Ga0308181_1029941All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium938Open in IMG/M
3300031421|Ga0308194_10151260All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium716Open in IMG/M
3300031707|Ga0315291_11319213All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium581Open in IMG/M
3300031740|Ga0307468_100207072All Organisms → cellular organisms → Bacteria1334Open in IMG/M
3300031854|Ga0310904_10752778All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium678Open in IMG/M
3300031858|Ga0310892_10990175All Organisms → cellular organisms → Bacteria592Open in IMG/M
3300031892|Ga0310893_10379524All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium615Open in IMG/M
3300031908|Ga0310900_11141785All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium646Open in IMG/M
3300032000|Ga0310903_10624848All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium576Open in IMG/M
3300032003|Ga0310897_10274780All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium762Open in IMG/M
3300032003|Ga0310897_10346068All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium691Open in IMG/M
3300032013|Ga0310906_10577915All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium771Open in IMG/M
3300032143|Ga0315292_10383493All Organisms → cellular organisms → Bacteria1178Open in IMG/M
3300032164|Ga0315283_12168519All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium547Open in IMG/M
3300032177|Ga0315276_10094668All Organisms → cellular organisms → Bacteria3025Open in IMG/M
3300032179|Ga0310889_10306001All Organisms → cellular organisms → Bacteria768Open in IMG/M
3300032211|Ga0310896_10678393All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium581Open in IMG/M
3300033551|Ga0247830_11251498All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium593Open in IMG/M
3300034150|Ga0364933_029125All Organisms → cellular organisms → Bacteria1343Open in IMG/M
3300034643|Ga0370545_062652All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium747Open in IMG/M
3300034666|Ga0314788_080329All Organisms → cellular organisms → Bacteria702Open in IMG/M
3300034669|Ga0314794_031843All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium915Open in IMG/M
3300034672|Ga0314797_044915All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium787Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil19.15%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil15.60%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil5.67%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment4.96%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere4.96%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment3.55%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil3.55%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere3.55%
SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Sediment2.84%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands2.84%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil2.84%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil2.13%
Groundwater SandEnvironmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand2.13%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment1.42%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere1.42%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere1.42%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere1.42%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.42%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.42%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere1.42%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment0.71%
Freshwater And SedimentEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater And Sediment0.71%
Wetland SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment0.71%
SoilEnvironmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil0.71%
Polar Desert SandEnvironmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand0.71%
WetlandEnvironmental → Aquatic → Marine → Wetlands → Sediment → Wetland0.71%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil0.71%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.71%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil0.71%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.71%
Natural And Restored WetlandsEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands0.71%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil0.71%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere0.71%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere0.71%
SedimentEnvironmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment0.71%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.71%
Corn, Switchgrass And Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere0.71%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.71%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere0.71%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.71%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.71%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere0.71%
Switchgrass, Maize And Mischanthus LitterEngineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter0.71%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2170459020Litter degradation NP2EngineeredOpen in IMG/M
3300000881Soil microbial communities from Great Prairies - Wisconsin Restored Prairie soilEnvironmentalOpen in IMG/M
3300001213Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)EnvironmentalOpen in IMG/M
3300002459Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6Host-AssociatedOpen in IMG/M
3300003987Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleB_D2EnvironmentalOpen in IMG/M
3300003995Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleA_D2EnvironmentalOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300004480Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4EnvironmentalOpen in IMG/M
3300004782Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare2FreshEnvironmentalOpen in IMG/M
3300005161Soil and rhizosphere microbial communities from Laval, Canada - mgLPAEnvironmentalOpen in IMG/M
3300005329Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaGEnvironmentalOpen in IMG/M
3300005343Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaGEnvironmentalOpen in IMG/M
3300005354Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaGHost-AssociatedOpen in IMG/M
3300005356Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaGHost-AssociatedOpen in IMG/M
3300005459Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2Host-AssociatedOpen in IMG/M
3300005466Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaGEnvironmentalOpen in IMG/M
3300005549Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaGEnvironmentalOpen in IMG/M
3300005713Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)EnvironmentalOpen in IMG/M
3300005718Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2Host-AssociatedOpen in IMG/M
3300005841Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2Host-AssociatedOpen in IMG/M
3300006572Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHPB (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006581Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPB (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006881Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2Host-AssociatedOpen in IMG/M
3300006918Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100EnvironmentalOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009101Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaGHost-AssociatedOpen in IMG/M
3300009148Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaGHost-AssociatedOpen in IMG/M
3300009157Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015EnvironmentalOpen in IMG/M
3300009174Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaGHost-AssociatedOpen in IMG/M
3300009817Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_10_20EnvironmentalOpen in IMG/M
3300010029Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_10_20EnvironmentalOpen in IMG/M
3300010147Soil microbial communities from California, USA to study soil gas exchange rates - BB-CA-RED metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010362Tropical forest soil microbial communities from Panama - MetaG Plot_22EnvironmentalOpen in IMG/M
3300011412Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT620_2EnvironmentalOpen in IMG/M
3300011434Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT814_2EnvironmentalOpen in IMG/M
3300011441Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT513_2EnvironmentalOpen in IMG/M
3300011442Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT138_2EnvironmentalOpen in IMG/M
3300012232Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT100_2EnvironmentalOpen in IMG/M
3300012684Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ279 (21.06)EnvironmentalOpen in IMG/M
3300012897Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S074-202C-1EnvironmentalOpen in IMG/M
3300012901Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S119-311C-1EnvironmentalOpen in IMG/M
3300012903Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S134-311R-1EnvironmentalOpen in IMG/M
3300012906Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S212-509R-1EnvironmentalOpen in IMG/M
3300012907Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S044-104R-1EnvironmentalOpen in IMG/M
3300012910Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S198-509B-2EnvironmentalOpen in IMG/M
3300012943Backyard soil microbial communities from Emeryville, California, USA - Original compost - Back yard soil (BY)EnvironmentalOpen in IMG/M
3300012958Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MGEnvironmentalOpen in IMG/M
3300012985Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MGEnvironmentalOpen in IMG/M
3300013096Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2EnvironmentalOpen in IMG/M
3300013308Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaGHost-AssociatedOpen in IMG/M
3300014311Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailB_D1EnvironmentalOpen in IMG/M
3300014745Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaGHost-AssociatedOpen in IMG/M
3300014884Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT730_16_1DaEnvironmentalOpen in IMG/M
3300015200Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)EnvironmentalOpen in IMG/M
3300015258Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT45_16_1DaEnvironmentalOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300017792Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaGHost-AssociatedOpen in IMG/M
3300017965Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 TEnvironmentalOpen in IMG/M
3300018028Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coexEnvironmentalOpen in IMG/M
3300018031Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1EnvironmentalOpen in IMG/M
3300018082Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b2EnvironmentalOpen in IMG/M
3300018083Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1EnvironmentalOpen in IMG/M
3300018422Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 TEnvironmentalOpen in IMG/M
3300018469Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 TEnvironmentalOpen in IMG/M
3300018476Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 TEnvironmentalOpen in IMG/M
3300019244Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT293_16_1Ra (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019248Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT660_2_16_1Ra (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019259Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019263Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019356Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)EnvironmentalOpen in IMG/M
3300019362Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)EnvironmentalOpen in IMG/M
3300021081Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_coex redoEnvironmentalOpen in IMG/M
3300022694Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coexEnvironmentalOpen in IMG/M
3300022756Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1EnvironmentalOpen in IMG/M
3300023069Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S049-202B-5EnvironmentalOpen in IMG/M
3300023071Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S019-104C-5EnvironmentalOpen in IMG/M
3300023077Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S076-202R-6EnvironmentalOpen in IMG/M
3300025791Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleB_D2 (SPAdes)EnvironmentalOpen in IMG/M
3300025792Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleC_D2 (SPAdes)EnvironmentalOpen in IMG/M
3300025926Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025937Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025938Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025960Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026023Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026089Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026121Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300027209Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_0_10 (SPAdes)EnvironmentalOpen in IMG/M
3300027444Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G10A1w-11 (SPAdes)EnvironmentalOpen in IMG/M
3300027483Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G05.2A1-12 (SPAdes)EnvironmentalOpen in IMG/M
3300027870Freshwater and sediment microbial communities from Lake Erie, Canada (SPAdes)EnvironmentalOpen in IMG/M
3300027880Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)Host-AssociatedOpen in IMG/M
3300028589Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day1EnvironmentalOpen in IMG/M
3300028592Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30EnvironmentalOpen in IMG/M
3300028596Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glycerol_Day14EnvironmentalOpen in IMG/M
3300028597Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day14EnvironmentalOpen in IMG/M
3300028710Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_380EnvironmentalOpen in IMG/M
3300028809Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day48EnvironmentalOpen in IMG/M
3300028876Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140EnvironmentalOpen in IMG/M
3300028885Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185EnvironmentalOpen in IMG/M
3300028889Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day2EnvironmentalOpen in IMG/M
3300030336Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1EnvironmentalOpen in IMG/M
3300030903Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_369 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031099Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_152 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031421Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031707Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_20EnvironmentalOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300031854Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1EnvironmentalOpen in IMG/M
3300031858Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2EnvironmentalOpen in IMG/M
3300031892Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D2EnvironmentalOpen in IMG/M
3300031908Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1EnvironmentalOpen in IMG/M
3300032000Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D3EnvironmentalOpen in IMG/M
3300032003Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1EnvironmentalOpen in IMG/M
3300032013Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3EnvironmentalOpen in IMG/M
3300032143Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_0EnvironmentalOpen in IMG/M
3300032164Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_0EnvironmentalOpen in IMG/M
3300032177Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G05_0EnvironmentalOpen in IMG/M
3300032179Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2EnvironmentalOpen in IMG/M
3300032211Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1EnvironmentalOpen in IMG/M
3300033551Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5EnvironmentalOpen in IMG/M
3300034150Sediment microbial communities from East River floodplain, Colorado, United States - 25_j17EnvironmentalOpen in IMG/M
3300034643Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_120 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300034666Metatranscriptome of lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8R2 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300034669Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8R3 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300034672Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24R2 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
2NP_043774802170459020Switchgrass, Maize And Mischanthus LitterVRTVYWFWSIVVLVMVVLQIAFAGYGAFYASHKLEDEGSSITDKTFEDGFGIHIGFGYLVWLAVMILLVIGVIAGVGRWRL
JGI10215J12807_121640623300000881SoilVRTVYWVWSMVVFVMVVIQIGLAGYGAFFVAKKLDDEGSTIDDKVFEDGFQFHAALGYFVILAGLVLMIIGLVAGIGKWRLGKHGLLFLLLFVQLW
JGIcombinedJ13530_10309585513300001213WetlandVRTVYWVWSMVVFVMVVIQIGLAGYGAFFVAHKLDDEGSTIDDKVFEDGFQFHAALGYFVILAGLVLMIIGLIAGIGKWRLGKHGLLFLLLFIQLWLAWIGF
JGI24751J29686_1008150113300002459Corn, Switchgrass And Miscanthus RhizosphereVRTVYWFWSIVVLVMVVLQIAFAGYGAFYAAHKLEDEGSSITDKTFEDGFGIHIGFGYLVWLAVMVLLVIGVI
Ga0055471_1015088923300003987Natural And Restored WetlandsVRTVYWVWSMVVFVMVVIQIGLAGYGAFFVAHKLDDEGSTIDDKVFEDGFQFHAALGYFVILAGLVLMIIGLIAGIGKWRLGKHGLL
Ga0055438_1019678423300003995Natural And Restored WetlandsVRTVYWVWSMVVLVMVVIQIGLAGYGAFYAANKLDDEGSTIDDKIFQDGFQFHAALGYFVILAGLILMIIGLIAGIG
Ga0062595_10022436033300004479SoilVRTVYWVWSMVVFVMVVIQIGLAGYGAFYAAKKLDDEGSTIDDKTFQDGFQFHAAFGYFVILAGL
Ga0062595_10109591213300004479SoilVRTLYWFWSIVVLVMVVLQIAFAGYGAFYAAHKLSDDGSSITDKTFDHGFGIHVGFGYFVWLATMVLLIIGVIAGIGKWRLGRH
Ga0062592_10253128913300004480SoilVRTFYWAWAMILFAAIVVQIGLAGYGAFYAANKLEDEGSTIDEDVFFDGFELHAGWGYLVILLGLLFMVVGLIAGIGKWRLGRHGLLFGLLFIQLWLAWIGFE
Ga0062382_1043772813300004782Wetland SedimentVRTVYWAWSMILFAAIIVQIGLAGFGAFYAAHKLEDEGSTIDEDVFMDGFGLHAGWGYLVILLGLVFMIIGLIAGIGKWRLGRHGLLFLLLFIQLWLAWIGFAVPFPVGFLHPIN
Ga0066807_100854823300005161SoilVRTVYWVWSMILFASIIVQIGFAGYGAFYAANRLDDEGSTIDDQVFADGFGLHVAWGYLVILFGLIFMIIGLIAGIGKWRLGRHGLLFLLFFIQLWLAWIGSELPFPV
Ga0066807_104108113300005161SoilVRTVYWIWSMVVLVMVILQIGFAGYGAFYAAHKLEDEGSSITDKTFEDGFGLHIGFGYLVWLAVMILLVVGVIAGIG
Ga0070683_10005609763300005329Corn RhizosphereVRTVYWFWSIVVLVMVVLQIAFAGYGAFYAAHKLEDEGSSITDKTFEDGFGIHIGFGYLVWLAV
Ga0070687_10014127613300005343Switchgrass RhizosphereVRTVYWFWSIVVLVMVVLQIAFAGYGAFYAAHKLEDEGSSITDKTFEDGFGIHIGFGYLVWLAVM
Ga0070675_10005389213300005354Miscanthus RhizosphereVRTVYWIWSMVVLVMVVLQIGFAGYGAFYAAHKLEDEGSSITDKTFQDGFGLHAGFGYLVILAGLVLM
Ga0070674_10167656413300005356Miscanthus RhizosphereVRTVYWIWSMVVLVMVVLQIGFAGYGAFYAAHKLEDEGSSITDKTFQDGFGLHAGFGYLVILAGLVLMIIGLIAGIGKWRLGKHGLLFGLLFLQLWLAWIGFEVPFPIGFL
Ga0068867_10108668413300005459Miscanthus RhizosphereVRTVYWIWSMVVLVMVVLQIGFAGYGAFYAAHKLEDEGSSITDKTFQDGFGLHAGFGYLVILAGLVLMIIGLIAGIGKWRLGKHGLL
Ga0070685_1007674153300005466Switchgrass RhizosphereVRTVYWFWSIVVLVMVVLQIAFAGYGAFYAAHKLEDEGSSITDKTFEDGFGIHIGFGYLVWLAVMVLLVIGVIAGVGKWRLGK
Ga0070704_10154803023300005549Corn, Switchgrass And Miscanthus RhizosphereVRTVYWFWSIVVLVMVVLQIAFAGYGAFYAAHKLEDEGSSITDKTFEDGFGIHIGFGYLVWLAVMVLLVIGVIAG
Ga0066905_10228272013300005713Tropical Forest SoilVRTLYWAWSMILTAAIVVQIGLAGYGAFYAANKLDDEGATIDDDTFMDGFGFHAGFGYLVILLGLIFMIIGIAAGIGKWRLGRHGLLFLLLFIQLWLAWIGFELPFPVGF
Ga0068866_1064413213300005718Miscanthus RhizosphereVRTVYWVWSMVVFVMVVIQIGLAGYGAFFVAKKLDDEGSTIDDKVFEDGFQFHAALGYFVILAGLV
Ga0068863_10051961033300005841Switchgrass RhizosphereVRTVYWFWSIVVLVMVVLQIAFAGYGAFYAAHKLEDEGSSITDKTFEDGFGIHIGFGYLVWLAVMVLLVIGVIAGVGKWRLGKHGVLALLLTL
Ga0074051_1000146563300006572SoilVRTVYWVWSMLLFASIIVQIGFAGYGAFYAANKLDDEGSTIDDQVFADGFGLHVAWGYLVILFGLIF
Ga0074048_1003273913300006581SoilVRTVYWVWSMLLFASIIVQIGFAGYGAFYAANKLDDEGSTIDDQVFADGFGLHVAWGYLVILFGLIFMIIGLIAGIGKWRLGRHGLLFLLFFIQLWLAWVGSEVPFPVD
Ga0068865_10062858823300006881Miscanthus RhizosphereVRTVYWVWSMVVFVMVVIQIGLAGYGAFYAAKKLDDEGSTIDDKTFQDGFQFHAAFGYFVILAGLVLMIIGLIAGIG
Ga0068865_10214290713300006881Miscanthus RhizosphereVRTVYWVWSMVVFVMVVIQIGLAGYGAFFVAKKLDDEGSTIDDKVFEDGFQFHAALGYFVILAGLVLMIIGLIAGIG
Ga0079216_1012863413300006918Agricultural SoilVRTFYWAWAMILFAAIIVQIGLAGYGAFYAANKLEDEGSTIDEDVFFDGFGLHAGWGYLVLLLGLLFMVVGLIA
Ga0105245_1100626413300009098Miscanthus RhizosphereMVVFVMVVIQIGLAGYGAFFVAKKLDDEGSTIDDKVFEDGFQFHAALGYFVILAGLVLMIIGLIAGIGKWRLGKHGLL
Ga0105247_1085473113300009101Switchgrass RhizosphereVRTVYWFWSIVVLVMVVLQIAFAGYGAFYAAHKLEDEGSSITDKTFQDGFGLHAGFGYLVILAGLVLMIIGLIAGIGKWRLGKHGLLFGLLF
Ga0105243_1000759213300009148Miscanthus RhizosphereMVVLVMVVLQIGFAGYGAFYAAHKLEDEGSSITDKTFQDGFGLHAGFGYLVILAGLVLMIIGLIAGIGKWR
Ga0105092_1092774013300009157Freshwater SedimentMILFAAIIVQIGLSGYGAFYAANKLEDEGSTIDEDVYFDGFGLHAGWGYLVILLGLIFMVIGLIAGIGK
Ga0105241_1157157523300009174Corn RhizosphereMVVFVMVVIQIGLAGYGAFFVAKKLDDEGSTIDDKVFEDGFQFHAAFGYFVILAGLVLMIIGLIAGIGKWRLGKHGLLFGLLFLQLWLAWIGFEVPFPVGFLHPI
Ga0105062_103685213300009817Groundwater SandMILFAAITVQIGLAGYGAFYAASKLDDEGSTIDDEVFMDGFGLHAGWGYLVILLGLIFMIIGLIAGIGKWRLGRHGLLFLLLFIQLWLAWIGFAVPFP
Ga0105074_100391453300010029Groundwater SandMILFAAITVQIGLAGYGAFYAANKLDDEGSTIDDEVFMDGFGLHAGWGYLVILFGLIFMILGIIAGIGKWRLGRHGLLSLLLFIQLWLAWIGF
Ga0126319_128263513300010147SoilMVVLVMVVIQIGLAGYGAFFVAKKLDDEGSTIDDKVFEDGFQFHAALGYFVILAGLVLMIIGLIAGIGRWRLGKHGLLFGLLFLQLWLAW
Ga0126377_1316696213300010362Tropical Forest SoilMVVLVMVVIQIGLAGYGAFFVAKKLDDEGSTIDDKVFEDGFGFHAAMGYFVILAGLVLLIIGLIAGVGKWRM
Ga0137424_102017523300011412SoilMILFAAIIVQIGLSGYGAFYAANKLEDEGSTIDEDVFFDGFGLHAGWGYLVILLGLIFMVIGLIAGIGKWRLGRHGLLFLLLFVQLWLAWIGFELPFPVGFLHPINAV
Ga0137464_128193723300011434SoilMIVFAAIIVQVGFAGYGAFYAANKLNDEGSTIDDEVFMDGFGLHSGFGYLVILFGLVLMVIGLIAGI
Ga0137452_105307533300011441SoilMIVFAAIIVQVGFAGYGAFYAANKLNDEGSTIDDEVFMDGFGLHSGFGYLVILFGLVLMVIGLIAGIGKWRLGRHGLLFLLLFIQLWLAWIGFEVPFPVGF
Ga0137437_127870713300011442SoilMLLTAAIIIQIGLAGYGAFYAANKLDDEGSTIDDEVFMDGFGLHAGWGYLVILFGLIFMIIGLIAGIGKWRLGRHGLLFALLFIQLWLAWIGFALPFPVGFLHPINAM
Ga0137435_125141923300012232SoilMVVLVMVVLQIGFAGYGAFYAAGKLDEDGSTITDKTFEDGFGLHIGFGYLVFLAGVVLLILGLIAG
Ga0137435_127423013300012232SoilMLLTAAIIIQIGLAGYGAFYAANKLDDEGSTIDDEVFMDGFGLHAGWGYLVILFGLIFMIIGLIAGIGKWRLGRHGLLFALLFIQLWLAWIG
Ga0136614_1046857023300012684Polar Desert SandMILFVAIVIQVGLAGYGAFYAASKLEDEGSTIDEDVFFDGFGLHAGFGYLVVLLGLVFLVLGVIAGIGRWRLGQHGLLFALLLL
Ga0157285_1035255823300012897SoilVRTVYWVWSMVVFVMVVIQIGLAGYGAFFVAKKLDDEGSTIDDKVFEDGFQFHAAFGYFVILAGLVLMII
Ga0157288_1010160713300012901SoilMILTAAIVVQIGLAGYGAFYAANKLDAEGATIDDDTFMDGFGFHAGSGYLVMLLGLIFMIIGIVAGIGKWRLGRH
Ga0157289_1009221113300012903SoilVRTVYWFWSIVVLVMVVLQIAFAGYGAFYAAHKLEDEGSSITDKTFEDGFGIHIGFGYLVWLAVMVLLVIGVIAGVGKWRLGKHGVLALLLTLQ
Ga0157295_1029362713300012906SoilMVVFVMVVIQIGLAGYGAFFVAKKLDDEGSTIDDKVFEDGFQFHAALGYFVILAG
Ga0157283_1001315343300012907SoilVRTVYWFWSIVVLVMVVLQIAFAGYGAFYASSRLDEEGSSITDKTFEDGFGIHIGFGYLIWLAAVVLLVLGLIAGVGRWRLGKHGV
Ga0157308_1025834023300012910SoilMVLLVMIVLQIAFAGYGAFYAAGRLDEDGSTITDKTFEDGFGIHIGFGYLVWLAVMILLVIGVIAGVGRWRLGKHGVLALLLTLQVFLAWG
Ga0157308_1040709713300012910SoilMVVFVMVVIQIGLAGYGAFYAAKKLDDEGSTIDDKTFQDGFQFHAAFGYFVILAGLVLMIIGLIAGIGRWRLGKHGLLFALLFLQLWLAWIGFEVPFPVGFLHPINAFL
Ga0164241_1083091123300012943SoilVRTVYWVWSMVVLVMVVIQIGLAGYGAFYAAHKLDKEGSTIDDNVFQDGFVFHAAFGYFVILAGLVLMI
Ga0164299_1104860523300012958SoilMVVLVMVVVQIGLAGYGAFYAANKLDDEGSTIDDKVFQDGFQFHAAFGYFVILAGLVLMIIGLIAGIGKWRLGKHGLLFGLLFLQLWLAWVGSEVPFPVG
Ga0164308_1080639013300012985SoilVRTVYWFWSIVVMVMVVLQIAFAGYGAFYAAHKLNDEGSSITDKTFEHGFGVHAGFGYLVWLAVMVLLVIGVIAGV
Ga0157307_113910023300013096SoilMLLTAAIVVQIGFAGYGAFYAANKLDDEGSTIDDEVFMDGFGLHAGWGYLVILLGLIFMVIGIVACIGKWRLGRHGLLFLLLFVQLWLAWI
Ga0157375_1171380513300013308Miscanthus RhizosphereVRTVYWFWSIVVMVMVVLQIAFAGYGAFYAAHKLEDEGSSITDKTFEHGFGIHAGFGYFVWLAGIVLLILGVVAGVG
Ga0075322_114745013300014311Natural And Restored WetlandsMLLTAAIVVQIGLAGYGAFYAANKLDDEGSTIDDEVFMDGFGLHAGWGYLVILLGLIFMVIGIVAGIGKWRLGRHGLLFLLLFVQLWLAWIGFELPFPVGFLHPINAML
Ga0157377_1118505313300014745Miscanthus RhizosphereVRTVYWFWSIVVLVMVVLQIAFAGYGAFYAAHKLEDEGSSITDKTFEDGFGIHIGFGYLVWLAVMVLLV
Ga0180104_124833913300014884SoilMIVFAAIIVKVGFAGDGAFYAANKLNDEGSTIDDEVFMDGFGLHSGFGYLVILFGLVLMVIGLIAGIGKWRLGRHG
Ga0173480_1097540513300015200SoilMVVLVMVVIQIGLAGYGAFFVAKKLDDEGSTIDDKVFEDGFQFHAALGYFVILAGLVLMIIGLI
Ga0180093_103460313300015258SoilMIVFAAIIVQVGFAGYGAFYAANKLNDEGSTIDDEVFMDGFGLHSGFGYLVILFGLVLMVIGLIAGIGKWRLGRHGLLFLLLFIQLWLAW
Ga0132256_10037792243300015372Arabidopsis RhizosphereVYWFWSIVLLVMVILQIGFAGYGAFYAAHKLEDAGSSITDKQFEDGFGIHMGFGYLVWLAGIVLLLLGLIAGVGRWRLGKH
Ga0132256_10255799913300015372Arabidopsis RhizosphereMVVLVMVVLQIGFAGYGAFYAAHKLEDEGSSITDKTFEDGFGLHAGFGYLVILAGLILMIIGIIAGIGKWRLGKHGLLFGLLFLQLWLAWIGFEVPFPIGFLHPIN
Ga0132257_10382403313300015373Arabidopsis RhizosphereVRAVYWFWSIVVLVMVVLQIAFAGYGAFYASHKLEDDGSSITDKTFEDGFGIHIGFGYLVWLAVMILL
Ga0132257_10424376113300015373Arabidopsis RhizosphereMILTAAIVVQIGLAGYGAFYAANKLDDEGATIDDDTFMDGFGLHAGFGYLVILLGLVFLLIGIAAGIGKWRLGRHGLLFLLLFIQLWLAWIGFELPFPVGFLHPINAMLILA
Ga0163161_1128484513300017792Switchgrass RhizosphereVRTVYWIWSMVVLVMVVLQIGFAGYGAFYAAHKLEDEGSSITDKTFEDGFGLHAGFGYLVILAGLILMIIGIIAGIGKWRLGKHGLLFGLLFLQLWLAWIG
Ga0190266_1100417513300017965SoilVRTFYWAWSMILFAAIIVQIGLAGYGAFYAASKLEDEGSTIDEDVFFDGFGLHVGWGYLVILLGLLFMVIGLIAGIGKWRLG
Ga0184608_1045019123300018028Groundwater SedimentVRTVYWVWSMVVLVMVILQIGFAGYGAFYAAHKLEDEGSSITDKTFEDGFGLHIGFGYVVWLAVIVLLAIGVIAGVGRWRLGKHGVLALLLTLQILLAWTGGSVPAVGALHP
Ga0184634_1004025043300018031Groundwater SedimentVRTVYWVWSMILFAAITVQIGLAGYGAFYAANKLDDEGSTIDDEVFMDGFGLHAGWGYLVILFGLIFMI
Ga0184634_1035092923300018031Groundwater SedimentVRTVYWGWSMIVFVAIIVQVGFAGYGAFYAANKLDDEGSTIDDEVFMDGFGLHSGFGYLVILLGLILMVIGLIAGIGKWRLGRHGLLFLLLFIQLWLAWIGFAVPFPVGFLHPI
Ga0184634_1052224113300018031Groundwater SedimentVRTVYWFWSIVVLVMVVLQIGFAGYGAFYAAHKLEDDGSSITDKTFEDGFGLHIGFGYLVWLAVMVLLVIGVIAGVGRWRLGKHGVLALLLTLQILLAWFGGS
Ga0184639_1010742113300018082Groundwater SedimentVRTVYWFWSIVVLVMVVLQIGFAGYGAFYAAHKLEDDGSSITDKTFEDGFGLHIGFGYLVWLAVMVLLVIGVIAGVGRWRLGKHGVLALLLTLQILLAWF
Ga0184628_1044264423300018083Groundwater SedimentVRTVYWFWSIVVLVMVVLQIGFAGYGAFYAAHKLEDDGSSITDKTFEDGFGIHIGFGYLVWLSVMILLVIGVIAGVG
Ga0184628_1053351423300018083Groundwater SedimentVRTVYWVWSMVVLVMVVIQIGLAGYGAFFVAKKLDDEGSTIDDKVFEDGFQFHAAFGYFVILAGLVLMIIGLIAGIGKWRLGKHGLLF
Ga0190265_1004124613300018422SoilVRTIYWLWSILMFAAIVFQVGLAGYGAFYAANKLDDEGATIDEDVFFDGFGIHTGVGYLVVLLGLVFLAIGVIAGIGKWRLGRHGVLFGLLILQV
Ga0190270_1064140423300018469SoilMVVFAMVVIQIGLAGYGAFYAANKLEDEGSTINDDVFMDGFGLHAGLGYLVILAG
Ga0190274_1077564533300018476SoilVRTFYWAWSLILFAAIIVQIGLAGYGAFYAANKLEDEGSTIDEDVFFDGFELHAGWGYLVMLLGLLFMVIGLIAGIGKWRLGRHGLLFLL
Ga0180111_115479513300019244Groundwater SedimentVRTFYWAWSLILFAAIIVQIGLAGYGAFYAANKLEDEGSTIDEDVFFDGFELHAGWGYLVILLGLLFMVIGLIAGI
Ga0180117_123229713300019248Groundwater SedimentVRTFYWAWSMILFAAIIVQIGLSGYGAFYAANKLEDEGSTIDEDVYFDGFGLHAGWGYLVILLGLLFMV
Ga0184646_134164923300019259Groundwater SedimentVRTVYWVWSMLVFAAVVIQVGLAGYGAFYAANKLNDEGSTIDDEVFMDGFGLHAGVGYLVILLGLVFMVIGLIAGIGKWRL
Ga0184647_103950623300019263Groundwater SedimentVRTVYWAWSMLLTAAIIIQIGLAGYGAFYAANKLDDEGSTIDDEVFMDGFGLHAGFGYLVILFGLIFMVIGLIAGIGKWRLGRHGLLFLLLFIQLWLAWIGFAVPFPVGFLHPIN
Ga0173481_1015383813300019356SoilVRTVYWFWSIVVLVMVVLQIAFAGYGAFYAAHKLEDEGSSITDKTFEDGFGIHIGFGYLVWLAVMVLLVIGVVAG
Ga0173481_1032556623300019356SoilVRTVYWVWSMVVLVMVVVQIGLAGYGAFYAANKLDDEGSTIDDKVFEDGFQFHAAFGYFVILAGLVLMIIGLIAGIGKWRLGKHGLLFGL
Ga0173481_1057170523300019356SoilVRTVYWVWSMVVFVMVVIQIGLAGYGAFYAAKKLDDEGSTIDDKTFQDGFQFHAAFGYFVILAGLVLMIIGLIAGIGRWRLGKHGLLFALLFLQLWLAWIGFEVPFPVGFLH
Ga0173479_1070565123300019362SoilVRTVYWVWSMVVFVMVVIQIGLAGYGAFYAANKLDDEGSTIDDKVFEDGFQFHAAFGYFVILAGLVLMIIGLIAGIGKWRLGKH
Ga0210379_1025336413300021081Groundwater SedimentVRTVYWIWSMVVLVMVVLQIGFAGYGAFYVAHKLEDEGSTIDDKVFEDGFSFHSGFGYLVILAGLILMIIGIIAGVGKWRLGKHGL
Ga0222623_1036594313300022694Groundwater SedimentVRTIYWVWSMLLFAAIVLQVGFAGYGAFYAAHKLDDEGSTIDDDVFLDGFGIHVGFGYLVVLLGLVFVAIGVIAGIGRWRLGRHGLLSGLLILQVILAWIGFGVPAL
Ga0222622_1101281613300022756Groundwater SedimentLRTVYWFWSIVVLVMVVLQIAFAGYGAFYAAHKLEDEGSSITDKMFEDGFGIHIGFGYLVWLAGMVLLVIGVIAGVGRWRLGKHGVLALLLTLQILLAWFGGSVPAI
Ga0247751_105655413300023069SoilVRTVYWFWSIVVLVMVVLQIAFAGYGAFYAAHKLEDEGSSITDKTFEDGFGIHIGFGYLVWLAVMVLLVIGVIAGVGKWRLGKHGVL
Ga0247752_106878923300023071SoilVRTVYWVWSMVVLVMVVIQIGLAGYGAFFVAKKLDDEGSTIDDKVFEDGFQFHAALGYFVILAGLVLMIIGLIAGIGKWRLGKHGLL
Ga0247802_103404023300023077SoilVRTVYWFWSIVVLVMVVLQIAFAGYGAFYAAHKLEDEGSSITDKTFEDGFGIHIGFGYLVWLAVMVLLVIGVIAGVGKWR
Ga0210115_108629413300025791Natural And Restored WetlandsVRTVYWVWSMVVFVMVVIQIGLAGYGAFFVAHKLDDEGSTIDDKVFEDGFQFHAALGYFVILAG
Ga0210143_100643453300025792Natural And Restored WetlandsVRTVYWGWSMLLTAAIVVQIGLAGYGAFYAANKLDDEGSTIDDEVFMDGFGLHAGWGYLVILLGLIFMVIGIVAG
Ga0207659_1063983423300025926Miscanthus RhizosphereVRTVYWVWSMVVFVMVVIQIGLAGYGAFYAAKKLDDEGSTIDDKTFQDGFQFHAAFGYFVILAGLVLM
Ga0207659_1109029623300025926Miscanthus RhizosphereVRTVYWAWSMILTAAIVVQIGLAGYGAFYAANKLDDEGATIDDDTFMDGFGFHAGFGYIVILLGLIFMLIGVAAGIGKWRLGRH
Ga0207669_1052867623300025937Miscanthus RhizosphereVRTVYWVWSMVVFVMVVIQIGLAGYGAFYAAKKLDDEGSTIDDKTFQDGFQFHAAFGYFVILAGLVLMIIGLIAGIGRWRLGKHGLL
Ga0207704_1127631913300025938Miscanthus RhizosphereVRTVYWAWSMILTAAIVVQIGLAGYGAFYAANKLDDEGATIDDDTFMDGFGFHAGFGYIVILLGLIFMLIGVAAG
Ga0207651_1082119513300025960Switchgrass RhizosphereVRTVYWAWSMILTAAIVVQIGLAGYGAFYAANKLDGEGATIDDDTFMDGFGLHAGFGYLVILLGLIFMIIGIVAGIGKWRLGRHGLLFLLLFIQLWLAWIG
Ga0207677_1174358123300026023Miscanthus RhizosphereVRTVYWAWSMILTAAIVVQIGLAGYGAFYAANKLDDEGATIDDDTFMDGFGFHAGFGYIVILLGLIFMLIGVAAGIGKWRLGRHGLLF
Ga0207648_1033631313300026089Miscanthus RhizosphereMVVLVMVVLQIGFAGYGAFYAAHKLEDEGSSITDKTFQDGFGLHAGFGYLVILAGLVLMIIGLIAGIGKWRLGKHGLLFGLLFLQLWLAWIGFEVPFP
Ga0207683_1020476413300026121Miscanthus RhizosphereVRTVYWFWSIVVLVMVVLQIAFAGYGAFYAAHKLEDEGSSITDKTFEDGFGIHIGFGYLVWLAVMVLLVI
Ga0207683_1180197113300026121Miscanthus RhizosphereVRTVYWVWSMVVFVMVVIQIGLAGYGAFYAAKKLDDEGSTIDDKTFQDGFQFHAAFGYFVILAGLVLMIIGLIAGIGRWRLGKHGLLFALLFLQLWLAWIGFEVPFPVGFLHPINAF
Ga0209875_103683023300027209Groundwater SandVRTVYWAWSMILFAAIIVQIGLAGYGAFYAANKLDDEGSTIDDEVFMDGFGLHAGLGYLVILFGLIFMILGIIAGIGKWRLGR
Ga0207468_101148813300027444SoilVRTLYWAWSMILTAAIVVQIGLAGYGAFYAANKLDAEGATIDDDTFMDGFGLHAGFGYLVILLGLIFMIIGLAAGIGKWRLGRHGLLFLLLFIQLWLAWIGFE
Ga0207637_100409333300027483SoilVRTLYWAWSMILTAAIVVQIGLAGYGAFYAANKLDAEGATIDDDTFMDGFGLHAGFGYLVILLGLIFMII
Ga0209023_1035051123300027870Freshwater And SedimentMVLLAMVVVQIGLAGYGAFYAANKLEDAGSTINDDVFQDGFGLHAGFGYLVILSGLILLVIGLIAGIGKWRLGRQGVLALLLILQMFLAWFGFGIPLI
Ga0209481_1001529663300027880Populus RhizosphereVRTVYWGWSMLLTAAIVVQIGFAGYGAFYAANKLDDEGSTIDDEVFMDGFGLHAGWGYLVILLGLIFMVIGIVAGIGKWRLGRHGL
Ga0247818_1031149113300028589SoilVRTVYWVWSMVVLVMVVIQIGLAGYGAFFVAKKLDDEGSTIDDKVFEDGFQFHAALGYFVILAGL
Ga0247822_1130282423300028592SoilVRTVYWVWSMVVFVMVVIQIGLAGYGAFFVAKKLDDEGSTIDDKVFEDGFQFHAALGYFVILAGLVLMIIGLIAGIGKWRLGKHGLLFLLLFVQLWLAWIGFEVPFPV
Ga0247821_1120410513300028596SoilVRTVYWVWSMVVFVMVVIQIGLAGYGAFFVAKKLDDEGSTIDDKVFEDGFQFHAALGYFVILAGLVLMIIGLIAGIGKWRLGKHGLLFLLLFVQLWLAWIGFEVPFP
Ga0247820_1027382713300028597SoilMVVLVMVVIQIGLAGYGAFFVAKKLDDEGSTIDDKVFEDGFQFHAALGYFVILAGLVLMIIGLIAGIGKWRLG
Ga0247820_1128497823300028597SoilVRTVYWVWSMVVFVMVVIQIGLAGYGAFFVAKKLDDEGSTIDDKVFEDGFQFHAAFGYFVILAGLVLMIIGLIAGIGKW
Ga0307322_1010853923300028710SoilVRTVYWVWSMVVLVMVILQIGFAGYGAFYAAHKLEDEGSSITDKTFEDGFGLHIGFGYVVWLAVIVLLAIGVIAGVGRWRLGKHGVLALLLTLQ
Ga0247824_1086110613300028809SoilMILFAAIIVQIGLAGYGAFYAANKLDDEGSTIDDEVFMDGFGLHAGWGYLVILLGLIFMIIGLIAGVGKWRLGRHGLLFLLLFVQLWLAWIGFAVPF
Ga0307286_1016974713300028876SoilLRTVYWFWSIVVLVMVVLQIAFAGYGAFYATHKLEDEGSSITDKMYEDGFGLHIGFGYLVWLAVMVLLVIGVIAGVGRW
Ga0307304_1002073553300028885SoilVRTVYWVWSMVVLVMVILQIGFAGYGAFYAAHKLEDEGSSITDKTFEDGFGLHIGFGYVVWLAVIVLLAIGVIAGVGRWRLGKHGVLALLL
Ga0247827_1018961933300028889SoilVRTVYWVWSMVVLVMVVIQIGLAGYGAFFVAKKLDDEGSTIDDKVFEDGFQFHAALGYFVILAGLVLMIIGLIAGIGK
Ga0247826_1014316313300030336SoilVRTVYWAWSMILTAAIVVQIGLAGYGAFYAANKLDGEGATIDDDTFMDGFGFHAGFGYLVILLGLIFMIIGIVAGIGKWRLGRHGLLFLLLFV
Ga0308206_113126413300030903SoilVRTIYWVWSMLMFVAIVIQIGFAGYGAFYAANKLDDEGSTIDEDVLLDGFGLHVGFGYLVVLLGLVFLAIGVVAGIGKWRLGRHGLLF
Ga0308181_102994113300031099SoilMVVLVMVILQIAFAGYGAFYAAHKLEDEGSSITDKTFEDGFGIHIGFGYLLWLAVMVLLVIGVIAGVGRWRLGKHGVLALLLTLQI
Ga0308194_1015126013300031421SoilVRTVYWVWSMVVLVMVILQIGFAGYGAFYAAHKLSDEGSSITDKTFEDGFGLHIAFGYLVWLAGLVLLAIGVIAGVGRWRLGKHGVLAL
Ga0315291_1131921323300031707SedimentMVVLLMVVVQIGLAGYGAFYAANKLEDEGSTISDDVFMDGFGLHAGFGYLVIISGLVLMVVGLIAG
Ga0307468_10020707213300031740Hardwood Forest SoilVRTVYWVWSMVVFVMVVIQIGLAGYGAFFVAKKLDDEGSTIDDKVFEDGFQFHAAFGYFVILAGLVLMIIGLIAGIGKWRLGKHGLLFGLLFLQLWLAWIGF
Ga0310904_1075277813300031854SoilVRTVYWVWSMVVLVMVVIQIGLAGYGAFFVAKKLDDEGSTIDDKVFEDGFQFHAALGYFVILAGLVLMIIGLIAGIGKWRLGKHGLLFALLFLQLWLAWIGFEVPFPVGFLH
Ga0310892_1099017523300031858SoilVRTLYWAWSMILTAAIVVQIGLAGYGAFYAANKLDAEGATIDDDTFMDGFGLHAGFGYLVILLGLVFM
Ga0310893_1037952413300031892SoilVRTVYWVWSMVVLVMVVIQIGFAGYGAFFVAKKLDDEGSTIDDKVFEDGFQFHAALGYFVILAGLILMIIGLIAGIGKWRLGKHGLLFLLLFI
Ga0310900_1114178523300031908SoilVRTVYWVWSMVVFVMVVIQIGLAGYGAFFVAKKIDDDTTIDDKVFEDGFQFHAALGYFVILAGLVLMIIGLIAGIGKWRLGKHGLLFALLFLQLWLAWIGFEVPFPVGFLHPIN
Ga0310903_1062484813300032000SoilVRTVYWGWSMLLTAAIVVQIGFAGYGAFYAANKLDDEGSTIDDDVFMDGFGLHAGFGYLVILLGLIFMVIGVVAGIGKWRLG
Ga0310897_1027478013300032003SoilVRTVYWVWSMVVLVMVVIQIGLAGYGAFFVAKKLDDEGSTIDDKVFEDGFQFHAALGYFVILAGLVLMIIGLIAGIGKWRLGKHGLLFGLLFL
Ga0310897_1034606823300032003SoilVRTVYWVWSMVVFVMVVIQIGLAGYGAFFVAKKIDDDTTIDDKVFEDGFQFHAALGYFVILAGLVLMIIGLIAGIGKWRLGKHGLLFALLFL
Ga0310906_1057791523300032013SoilVRTVYWVWSMVVLVMVVIQIGFAGYGAFFVAKKLDDEGSTIDDKVFEDGFQFHAALGYFVILAGLILMIIGLIAGIGKWRMGKHGLL
Ga0315292_1038349333300032143SedimentMVVLVMVVVQIGLAGYGAFYAANKLEDEGSTISDDVFMDGFGLHAGFGYLVIISGLVLMVVG
Ga0315283_1216851913300032164SedimentVRTLYWLWSMVVLVMVVVQIGLAGYGAFYAANKLEDEGSTISDDVFMDGFGLHAGFGYLVILSGLVLMVIGLIAGIGKWRLGRQGVLALLLILQMF
Ga0315276_1009466863300032177SedimentVRTLYWLWSMVVLVMVVVQIGLAGYGAFYAANKLEDEGSTISDDVFMDGFGLHAGFGYLVIVSGLVLMVIGLIAGIGKWRLGRQGVLALLLILQMFLAWFGFG
Ga0310889_1030600123300032179SoilVRTVYWVWSMVVLVMVVLQIGFAGYGAFYAAHKLEDEGSSITDKTFQDGFGLHAGFGYMVILAGLILMIIGLIAGI
Ga0310896_1067839313300032211SoilVRTVYWAWSMILTAAIVVQIGLAGYGAFYAANKLDGEGATIDDDTFMDGFGFHAGFGYLVILLGLIFMIIGIVAGIGKWRLGRH
Ga0247830_1125149823300033551SoilTVYWAWSMILTAAIVVQIGLAGYGAFYAANKLDDEGATIDDDTFMDGFGFHAGFGYIVILLGLIFMLIGIAA
Ga0364933_029125_1128_13433300034150SedimentLRTVYWFWSIVVLVMVVLQIAFAGYGAFYAAHKLEDEGSSITDKMFEDGFGIHIGFGYLVWLAVMVLLVIGV
Ga0370545_062652_496_7473300034643SoilMVVLVMVVLQIGFAGYGAFYVAHKLEDEGSTIDDKVFEDGFSFHSGFGYLVILAGLILMIIGIIAGVGKWRLGKHGLLFLLLFA
Ga0314788_080329_504_7013300034666SoilVYWVWSMVVFVMVVIQIGLAGYGAFFVAKKIDDDTTIDDKVFEDGFQFHAALGYFVILAGLVLMII
Ga0314794_031843_3_2933300034669SoilMILTAAIVVQIGLAGYGAFYAANKLDAEGATIDDDTFMDGFGFHAGFGYLVILLGLIFMIIGLAAGIGKWRLGRHGLLFLLLFIQLWLAWIGFELPF
Ga0314797_044915_544_7863300034672SoilMLLTAAIVVQIGFAGYGAFYAANKLDEEGSTIDDDVFMDGFGLHAGFGYLVILLGLIFMVIGVVAGIGKWRLGRHGLLFLL


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.